1      -     51
UN21243        --> GGAAGTCTTCGTCGAGGAGCAG---CAGCAGCCCTGTTGTCAGGTTGAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY919035       <-- .........................................tcagTGAGA
EV541916       <-- ..................................................
EY919671       <-- ..................................................
FD958928       <-- ..................................................
EV572081       <-- ..................................................
EY919120       <-- ..................................................
EY911314       <-- ..................................................
EY934562       <-- ..................................................
EV537741       --> GGAAGTCTTCATCGAGCAGCAG---CAGCAGCCCTGTTGTCAGATTGAGA
EW725221       --> GGAAGTCTTCGTCGAGGAGCAG---CAGCAGCCCTGTTGTCAGGTTGAGA
EY923943       --> GGAAGTCTTCGTCGAGCAGCAGTAGCAGCAGCCCTGTTGTCAGGTTGAGA
EY938413       --> GGAAGTCTTCGTCGAGGAGCAG---CAGCAGCCCTGTTGTCAGGTTGAGA
EY915477       --> ..ggGTCTTCGTCGAGGAGCAG---CAGCAGCCCTGTTGTCAGGTTGAGA
EY923216       --> ..ggGTCTTCGTCGAGCAGCAGTAGCAGCAGCCCTGTTGTCAGGTTGAGA
EV567079       --> ........ggGTCGAGGAGCAG---CAGCAGCCCTGTTGTCAGATTGAGA
EY923314       --> .....gggtcgagcagcagtAG---CAGCAGCCCTGTTGTCAGGTTGAGA
FD962349       --> .....gggtcgagcagcagtAG---CAGCAGCCCTGTTGTCAGGTTGAGA
FD577416       --> ..................................................
EY933337       --> ..................................................

               51     -    101
UN21243        --> CGCCATGGGAAGAAGACCGGCTAGGTGTTACCGTCAGATCAAGGGTAAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY919035       <-- CGCCATGGGAAGAAGAC-GGCTAGGTGTTAC-GTCAGATCAAGGGTAAGC
EV541916       <-- ......................AGGTGTTACCGTCAGATCAAGGGTAAGC
EY919671       <-- ...................................AGATCAAGGGTAAGC
FD958928       <-- ..................................................
EV572081       <-- ..................................................
EY919120       <-- ..................................................
EY911314       <-- ..................................................
EY934562       <-- ..................................................
EV537741       --> CGCCATGGGAAGAAGACCGGCTAGGTGTTACCGTCAGATCAAGGGTAAGC
EW725221       --> CGCCATGGGAAGAAGACCGGCTAGGTGTTACCGTCAGATCAAGGGTAAGC
EY923943       --> CGCCATGGGAAGAAGACCGGCTAGGTGTTACCGTCAGATCAAGGGTAAGC
EY938413       --> CGCCATGGGAAGAAGACCGGCTAGGTGTTACCGTCAGATCAAGGGTAAGC
EY915477       --> CGCCATGGGAAGAAGACCGGCTAGGTGTTACCGTCAGATCAAGGGTAAGC
EY923216       --> CGCCATGGGAAGAAGACCGGCTAGGTGTTACCGTCAGATCAAGGGTAAGC
EV567079       --> CGCCATGGGAAGAAGACCGGCTAGGTGTTACCGTCAGATCAAGGGTAAGC
EY923314       --> CGCCATGGGAAGAAGACCGGCTAGGTGTTACCGTCAGATCAAGGGTAAGC
FD962349       --> CGCCATGGGAAGAAGACCGGCTAGGTGTTACCGTCAGATCAAGGGTAAAC
FD577416       --> .................CGGCTAGGTGTTACCGTCAGATCAAGGGTAAGC
EY933337       --> ..................................................

               101    -    151
UN21243        --> CATACCCTAAATCTCGCTACTGCCGTGGTGTCCCTGATCCCAAGATCAGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY919035       <-- CATACC-TAAATCTCGCTACTGCCGTGGTGTCC-TGATCCCAAGATCAGG  Raphanus raphanistrum subsp. landra
EV541916       <-- CATACCCTAAATCTCGCTACTGCCGTGGTGTTCCTGACCCCAAAATCAGG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY919671       <-- CATACCCTAAATCTCGCTACTGCCGTGGTGTCCCTGATCCCAAGATCAGG  Raphanus raphanistrum subsp. landra
FD958928       <-- .........AATCTCGCTACTGCCGTGGTGTCCCTGATCCCAAGATCAGG  Raphanus raphanistrum subsp. maritimus
EV572081       <-- ..................................................  Raphanus raphanistrum subsp. landra
EY919120       <-- ..................................................  Raphanus raphanistrum subsp. landra
EY911314       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY934562       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EV537741       --> CATACCCTAAATCTCGCTACTGCCGTGGTGTTCCTGACCCCAAAATCAGG  Raphanus raphanistrum subsp. raphanistrum (MS)
EW725221       --> CATACCCTAAATCTCGCTACTGCCGTGGTGTCCCTGACCCCAAAATCAGG  Raphanus sativus cv Early Scarlet Globe
EY923943       --> CATACCCTAAATCTCGCTACTGCCGTGGTGTCCCTGATCCCAAGATCAGG  Raphanus raphanistrum subsp. landra
EY938413       --> CATACCCTAAATCTCGCTACTGCCGCGGTGTCCCTGACCCCAAAATCAGG  Raphanus sativus cv Early Scarlet Globe
EY915477       --> CATACCCTAAATCTCGCTACTGCCGTGGTGTCCCTGACCCCAAGATCAGG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY923216       --> CATACCCTAAATCTCGCTACTGCCGTGGTGTCCCTGATCCCAAGATCAGG  Raphanus raphanistrum subsp. landra
EV567079       --> CATACCCTAAATCTCGCTACTGCCGTGGTGTCCCTGACCCCAAGATCAGG  Raphanus raphanistrum subsp. landra
EY923314       --> CATACCCTAAATCTCGCTACTGCCGTGGTGTCCCTGATCCCAAGATCAGG  Raphanus raphanistrum subsp. landra
FD962349       --> CATACCCTAAATCTCGCTACTGCCGTGGTGTCCCTGATCCCAAGATCAGG  Raphanus raphanistrum subsp. maritimus
FD577416       --> CATACCCTAAATCTCGCTACTGCCGTGGTGTTCCTGACCCCAAAATCAGG  Raphanus sativus cv Rat-Tail Radish #3870
EY933337       --> ..................................................  Raphanus sativus var. oleiformis

               151    -    201
UN21243        --> ATCTACGATGTCGGAATGAAGAGGAAGGGTGTCGATGAGTTCCCTTTCTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY919035       <-- ATCTACGATGTCGGAATGAAGAGGAAGGGTGTCGATGAGTTCCCTTTCTG  Raphanus raphanistrum subsp. landra
EV541916       <-- ATCTACGATGTCGGCATGAAGAGGAAGGGTGTCGATGAGTTCCCTTTCTG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY919671       <-- ATCTACGATGTCGGAATGAAGAGGAAGGGTGTCGATGAGTTCCCTTTCTG  Raphanus raphanistrum subsp. landra
FD958928       <-- ATCTACGATGTCGGAATGAAGAGGAAGGGTGTCGATGAGTTCCCTTTCTG  Raphanus raphanistrum subsp. maritimus
EV572081       <-- ..............AATGAAGAGGAAGGGTGTCGATGAGTTCCCTTTCTG  Raphanus raphanistrum subsp. landra
EY919120       <-- ..................................................  Raphanus raphanistrum subsp. landra
EY911314       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY934562       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EV537741       --> ATCTACGATGTCGGCATGAAGAGGAAGGGTGTCGATGAGTTCCCTTTCTG  Raphanus raphanistrum subsp. raphanistrum (MS)
EW725221       --> ATCTACGATGTCGGCATGAAGAGGAAGGGTGTCGATGAGTTCCCTTTCTG  Raphanus sativus cv Early Scarlet Globe
EY923943       --> ATCTACGATGTCGGAATGAAGAGGAAGGGTGTCGATGAGTTCCCTTTCTG  Raphanus raphanistrum subsp. landra
EY938413       --> ATCTACGATGTCGGCATGAAGAGGAAGGGTGTCGATGAGTTCCCTTTCTG  Raphanus sativus cv Early Scarlet Globe
EY915477       --> ATCTACGATGTCGGCATGAAGAGGAAGGGTGTCGATGAGTTCCCTTTCTG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY923216       --> ATCTACGATGTCGGAATGAAGAGGAAGGGTGTCGATGAGTTCCCTTTCTG  Raphanus raphanistrum subsp. landra
EV567079       --> ATCTACGATGTCGGAATGAAGAGGAAGGGTGTCGATGAGTTCCCTTTCTG  Raphanus raphanistrum subsp. landra
EY923314       --> ATCTACGATGTCGGAATGAAGAGGAAGGGTGTCGATGAGTTCCCTTTCTG  Raphanus raphanistrum subsp. landra
FD962349       --> ATCTACGATGTCGGAATGAAGAGGAAGGGTGTCGATGAGTTCCCTTTCTG  Raphanus raphanistrum subsp. maritimus
FD577416       --> ATCTACGATGTCGGCATGAAGAGGAAGGGTGTCGACGAGTTCCCTTTCTG  Raphanus sativus cv Rat-Tail Radish #3870
EY933337       --> ..................................................  Raphanus sativus var. oleiformis

               201    -    251
UN21243        --> CGTCCACCTCGTCTCATGGGAGAAGGAGAACGTCTCAAGCGAAGCACTCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY919035       <-- CGTCCACCTCGTCTCATGGGAGAAGGAGAACGTCTCAAGCGAAGCACTCG
EV541916       <-- CGTCCACCTCGTCTCATGGGAGAAGGAGAACGTCTCAAGCGAAGCACTCG
EY919671       <-- CGTCCACCTCGTCTCATGGGAGAAGGAGAACGTCTCAAGCGAAGCACTCG
FD958928       <-- CGTCCACCTCGTCTCATGGGAGAAGGAGAACGTCTCAAGCGAAGCACTCG
EV572081       <-- CGTCCACCTCGTCTCATGGGAGAAGGAGAACGTCTCAAGCGAAGCACTCG
EY919120       <-- ..TCCACCTCGTCTCATGGGAGAAGGAGAACGTCTCAAGCGAAGCACTCG
EY911314       <-- ..................................................
EY934562       <-- ..................................................
EV537741       --> CGTCCACCTCGTCTCATGGGAGAAGGAGAACGTCTCAAGCGAAGCACTCG
EW725221       --> CGTCCACCTCGTCTCATGGGAGAAGGAGAACGTCTCAAGCGAAGCACTCG
EY923943       --> CGTCCACCTCGTCTCATGGGAGAAGGAGAACGTCTCAAGCGAAGCACTCG
EY938413       --> CGTCCACCTCGTCTCATGGGAGAAGGAGAACGTCTCAAGCGAAGCACTCG
EY915477       --> CGTCCACCTCGTCTCATGGGAGAAGGAGAACGTCTCAAGCGAAGCACTCG
EY923216       --> CGTCCACCTCGTCTCATGGGAGAAGGAGAACGTCTCAAGCGAAGCACTCG
EV567079       --> CGTCCACCTCGTCTCATGGGAGAAGGAGAACGTCTCAAGCGAAGCACTCG
EY923314       --> CGTCCACCTCGTCTCATGGGAGAAGGAGAACGTCTCAAGCGAAGCACTCG
FD962349       --> CGTCCACCTCGTCTCATGGGAGAAGGAGAACGTCTCAAGCGAAGCACTCG
FD577416       --> CGTCCACCTCGTCTCGTGGGAGAAGGAGAACGTCTCAAGCGAAGCACTCG
EY933337       --> .................GGGAGAAGGAGAACGTCTCAAGCGAAGCACTCG

               251    -    301
UN21243        --> AAGCTGCGCGTATCGCTTGCAACAAGTACATGGTGAAATCCGCTGGGAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY919035       <-- AAGCTGCGCGTATTGCTTGCAACAAGTACATGGTGAAATCCGCTGGGAAA  Raphanus raphanistrum subsp. landra
EV541916       <-- AAGCTGCGCGTATCGCTTGCAACAAGTACATGGTGAAATCCGCTGGGAAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY919671       <-- AAGCTGCGCGTATCGCTTGCAACAAGTACATGGTGAAATCCGCTGGGAAA  Raphanus raphanistrum subsp. landra
FD958928       <-- AAGCTGCGCGTATCGCTTGCAACAAGTACATGGTGAAATCCGCTGGGAAA  Raphanus raphanistrum subsp. maritimus
EV572081       <-- AAGCTGCGCGCATCGCTTGCAACAAGTACATGGTGAAATCCGCTGGGAAA  Raphanus raphanistrum subsp. landra
EY919120       <-- AAGCTTCGCGTATCGCTTGCAACAAGTACATGGTGAAATCCGCTGGGAAA  Raphanus raphanistrum subsp. landra
EY911314       <-- AAGCTGCGCGTATCGCTTGCAACAAGTACATGGTCAAATCCGCGGGGAAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY934562       <-- .......GCGTATCGCTTGCAACAAGTACATGGTGAAATCCGCGGGGAAA  Raphanus sativus cv Early Scarlet Globe
EV537741       --> AAGCTGCGCGTATCGCTTGCAACAAGTACATGGTGAAATCCGCTGGGAAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EW725221       --> AAGCTGCGCGTATCGCTTGCAACAAGTACATGGTGAAATCCGCGGGGAAA  Raphanus sativus cv Early Scarlet Globe
EY923943       --> AAGCTGCGCGTATCGCTTGCAACAAGTACATGGTGAAATCCGCTGGGAAA  Raphanus raphanistrum subsp. landra
EY938413       --> AAGCTGCGCGTATCGCTTGCAACAAGTACATGGTGAAATCCGCGGGGAAA  Raphanus sativus cv Early Scarlet Globe
EY915477       --> AAGCTGCGCGTATCGCTTGCAACAAGTACATGGTCAAATCCGCGGGGAAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY923216       --> AAGCTGCGCGTATTGCTTGCAACAAGTACATGGTGAAATCCGCTGGGAAA  Raphanus raphanistrum subsp. landra
EV567079       --> AAGCTGCGCGCATCGCTTGCAACAAGTACATGGTGAAATCCGCTGGGAAA  Raphanus raphanistrum subsp. landra
EY923314       --> AAGCTTCGCGTATCGCTTGCAACAAGTACATGGTGAAATCCGCTGGGAAA  Raphanus raphanistrum subsp. landra
FD962349       --> AAGCTGCGCGTATCGCTTGCAACAAGTACATGGTGAAATCCGCTGGGAAA  Raphanus raphanistrum subsp. maritimus
FD577416       --> AAGCTGCGCGTATCGCTTGCAACAAGTACATGGTTAAATCTGCTGGGAAA  Raphanus sativus cv Rat-Tail Radish #3870
EY933337       --> AAGCTGCGCGTATCGCTTGCAACAAGTACATGGTGAAATCCGCGGGGAAA  Raphanus sativus var. oleiformis

               301    -    351
UN21243        --> GATGCGTTCCATCTGAGGATTAGGGTTCACCCTTTCCATGTTTTGAGGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY919035       <-- GATGCGTTCCATCTCAGGATTAGGGTTCACCCTTTCCATGTTTTGAGGAT
EV541916       <-- GATGCGTTCCATCTGAGGATTAGGGTTCACCCTTTCCATGTTTTGAGGAT
EY919671       <-- GATGCGTTCCATCTCAGGATTAGGGTTCACCCTTTCCATGCTTTGAGGAT
FD958928       <-- GATGCGTTCCATCTCAGGATTAGGGTTCACCCTTTCCATGTTTTGAGGAT
EV572081       <-- GATGCGTTCCATCTGAGGATTAGGGTTCACCCTTTCCATGTTTTGAGGAT
EY919120       <-- GATGCGTTCCATCTCAGGATTAGGGTTCACCCTTTCCATGTTCTGAGGAT
EY911314       <-- GATGCGTTCCATCTGAGGATTAGGGTTCACCCTTTCCATGT--TGAGGAT
EY934562       <-- GATGCGTTCCATCTGAGGATTAGGGTTCACCCTTTCCATGTTTTGAGGGT
EV537741       --> GATGCGTTCCATCTGAGGATTAGGGTTCACCCTTTCCATGTTTTGAGGAT
EW725221       --> GATGCGTTCCATCTGAGGATTAGGGTTCACCCTTTCCATGTTTTGAGGAT
EY923943       --> GATGCGTTCCATCTCAGGATTAGGGTTCACCCTTTCCATGCTTTGAGGAT
EY938413       --> GATGCGTTCCATCTGAGGATTAGGGTTCACCCTTTCCATGTTTTGAGGGT
EY915477       --> GATGCGTTCCATCTGAGGATTAGGGTTCACCCTTTCCATGTT--GAGGAT
EY923216       --> GATGCGTTCCATCTCAGGATTAGGGTTCACCCTTTCCATGTTTTGAGGAT
EV567079       --> GATGCGTTCCATCTGAGGATTAGGGTTCACCCTTTCCATGTTTTGAGGAT
EY923314       --> GATGCGTTCCATCTCAGGATTAGGGTTCACCCTTTCCATGTTCTGAGGAT
FD962349       --> GATGCGTTCC........................................
FD577416       --> GATGCGTTCCATCTGAGGATTAGGGTTCACCCTTTCCATGTTTTGAGGAT
EY933337       --> GATGCGTTCCATCTGAGGATTAGGGTTCACCCTTTCCATGTTTTGAGGAT

               351    -    401
UN21243        --> CAACAAGATGCTTTCGTGTGCTGGAGCTGATAGGCTTCAGACTGGTATGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY919035       <-- CAACAAGATGCTTTCGTGTGCTGAAGCTGATAGGCTTCAGACTGGTATGA
EV541916       <-- CAACAAGATGCTTTCGTGTGCTGGAGCTGATAGGCTTCAGACTGGTATGA
EY919671       <-- CAACAAGATGCTTTCGTGTGCTGGAGCTGATAGGCTTCAGACTGGTATGA
FD958928       <-- CAACAAGATGCTTTCGTGTGCTGGAGCTGATAGGCTTCAGACTGGTATGA
EV572081       <-- CAACAAGATGCTTTCGTGTGCTGGAGCTGATAGGCTTCAGACTGGTATGA
EY919120       <-- CAACAAGATGCTTTCGTGTGCTGGAGCTGATAGGCTTCAGACTGGTATGA
EY911314       <-- CAACAAGATGCTTTCGTGTGCTGGAGCTGATAGGCTTCAGACTGGTATGA
EY934562       <-- CAACAAGATGCTTTCGTGTGCTGGAGCTGATAGGCTTCAGACTGGTATGA
EV537741       --> CAACAAGATGCTTTCGTGTGCTGGAGCTGATAGGCTTCAGACTGGTATGA
EW725221       --> CAACAAGATGCTTTCGTGTGCTGGAGCTGATAGGCTTCAGACTGGTATGA
EY923943       --> CAACAAGATGCTTTCGTGTGCTGGAGCTGATAGGCTTCAGACTGGTATGA
EY938413       --> CAACAAGATGCTTTCGTGTGCTGGAGCTGATAGGCTTCAGACTGGTATGA
EY915477       --> CAACAAGATGCTTTCGTGTGCTGGAGCTGATAGGCTTCAGACTGGTATGA
EY923216       --> CAACAAGATGCTTTCGTGTGCTGAAGCTGATAGGCTTCAGACTGGTATGA
EV567079       --> CAACAAGATGCTTTCGTGTGCTGGAGCTGATAGGCTTCAGACTGGTATGA
EY923314       --> CAACAAGATGCTTTCGTGTGCTGGAGCTGATAGGCTTCAGACTGGTATGA
FD962349       --> ..................................................
FD577416       --> CAACAAGATGTTTTCGTGTGCTGGAGCTGATAGGCTTCAGACTGGTATGA
EY933337       --> CAACAAGATGCTTTCGTGTGCTGGAGCTGATAGGCTTCAGACTGGTATGA

               401    -    451
UN21243        --> GAGGTGCTTTTGGAAAGGCGTTGGGTACTTGTGCTCGTGTTGCGATTGGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY919035       <-- GAGGTGCTTTTGGAAAGGCGTTGGGTACTTGTGCTCGTGTTGCGATTGGT
EV541916       <-- GAGGTGCTTTTGGAAAGGCGTTGGGTACTTGTGCTCGTGTTGCGATTGGT
EY919671       <-- GAGGTGCTTTTGGAAAGGCGTTGGGTACTTGTGCTCGTGTTGCGATTGGT
FD958928       <-- GAGGTGCTTTTGGAAAGGCGTTGGGTACTTGTGCTCGTGTTGCGATTGGT
EV572081       <-- GAGGTGCCTTTGGAAAGGCGTTGGGTACTTGTGCTCGTGTTGCGATTGGT
EY919120       <-- GAGGTGCTTTTGGAAAGGCGTTGGGTACTTGTGCTCGTGTTGCGATTGGT
EY911314       <-- GGGGTGCTTTTGGAAAGGCGTTGGGTACTTGTGCTCGTGTTGCGATTGGT
EY934562       <-- GAGGTGCTTTTGGAAAGGCGTTGGGTACTTGTGCTCGTGTTGCGATTGGT
EV537741       --> GAGGTGCTTTTGGAAAGGCGTTGGGTACTTGTGCTCGTGTTGCGATTGGT
EW725221       --> GAGGTGCTTTTGGAAAGGCGTTGGGTACTTGTGCTCGTGTTGCGATTGGT
EY923943       --> GAGGTGCTTTTGGAAAGGCGTTGGGTACTTGTGCTCGTGTTGCGATTGGT
EY938413       --> GAGGTGCTTTTGGAAAGGCGTTGGGTACTTGTGCTCGTGTTGCGATTGGT
EY915477       --> GGGGTGCTTTTGGAAAGGCGTTGGGTACTTGTGCTCGTGTTGCGATTGGT
EY923216       --> GAGGTGCTTTTGGAAAGGCGTTGGGTACTTGTGCTCGTGTTGCGATTGGT
EV567079       --> GAGGTGCCTTTGGAAAGGCGTTGGGTACTTGTGCTCGTGTTGCGATTGGT
EY923314       --> GAGGTGCTTTTGGAAAGGCGTTGGGTACTTGTGCTCGTGTTGCGATTGGT
FD962349       --> ..................................................
FD577416       --> GAGGTGCTTTTGGAAAAGCGTTGGGTACTTGTGCTCGTGTTGCGATTGGT
EY933337       --> GAGGTGCTTTTGGAAAGGCGTTGGGTACTTGTGCTCGTGTTGCGATTGGT

               451    -    501
UN21243        --> CAGGTGCTTTTGTCTGTGAGGTGCAAGGATGCTCATGGTCACCATGCTCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY919035       <-- CAGGTGCTTTTGTCTGTGAGGTGCAAGGATGCTCATGGTCATCATGCTCA  Raphanus raphanistrum subsp. landra
EV541916       <-- CAGGTGCTTTTGTCTGTGAGGTGCAAGGATGCTCATGGTCACCATGCTCA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY919671       <-- CAGGTGCTTTTGTCTGTGAGGTGCAAGGATGCTCATGGTCATCATGCTCA  Raphanus raphanistrum subsp. landra
FD958928       <-- -AGGTGCTTTTGTCTGTGAGGTGCGAGGATGCTCATGGTCATCATGCTCA  Raphanus raphanistrum subsp. maritimus
EV572081       <-- CAGGTGCTTTTGTCTGTGAGGTGTAAGGATGCTCATGGTCACCATGCTCA  Raphanus raphanistrum subsp. landra
EY919120       <-- CAGGTGCTTTTGTCTGTGAGGTGCGAGGATGCTCATGGTCATCATGCTCA  Raphanus raphanistrum subsp. landra
EY911314       <-- CAGGTGCTTTTGTCTGTGAGGTGTAAGGATGCTCATGGTCACCATGCTCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY934562       <-- CAGGTGCTTTTGTCTGTGAGGTGTAAGGATGCTCATGGTCACCATGCTCA  Raphanus sativus cv Early Scarlet Globe
EV537741       --> CAGGTGCTTTTGTCTGTGAGGTGCAAGGATGCTCATGGTCACCATGCTCA  Raphanus raphanistrum subsp. raphanistrum (MS)
EW725221       --> CAGGTGCTTTTGTCTGTGAGGTGTAAGGATGCTCATGGTCACCATGCTCA  Raphanus sativus cv Early Scarlet Globe
EY923943       --> CAGGTGCTTTTGTCTGTGAGGTGCAAGGATGCTCATGGTCATCATGCTCA  Raphanus raphanistrum subsp. landra
EY938413       --> CAGGTGCTTTTGTCTGTGAGGTGTAAGGATGCTCATGGTCACCATGCTCA  Raphanus sativus cv Early Scarlet Globe
EY915477       --> CAGGTGCTTTTGTCTGTGAGGTGTAAGGATGCTCATGGTCACCATGCTCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY923216       --> CAGGTGCTTTTGTCTGTGAGGTGCAAGGATGCTCATGGTCATCATGCTCA  Raphanus raphanistrum subsp. landra
EV567079       --> CAGGTGCTTTTGTCTGTGAGGTGTAAGGATGCTCATGGTCACCATGCTCA  Raphanus raphanistrum subsp. landra
EY923314       --> CAGGTGCTTTTGTCTGTGAGGTGCGAGGATGCTCATGGTCATCATGCTCA  Raphanus raphanistrum subsp. landra
FD962349       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD577416       --> CAGGTGCTTTTGTCTGTGAGGTGCAAGGATGCTCATGGTCACCATGCTCA  Raphanus sativus cv Rat-Tail Radish #3870
EY933337       --> CAGGTGCCTTTGTCTGTGAGGTGTAAGGATGCTCATGGTCACCATGCTCA  Raphanus sativus var. oleiformis

               501    -    551
UN21243        --> AGAGGCTTTGAGGAGGGCTAAGTTTAAGTTCCCTGGTCGTCAAAAGATTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY919035       <-- AGAGGCTTTGAGGAGGGCTAAGTTTAAGTTCCCTGGTCGTCAGAAGATTA  Raphanus raphanistrum subsp. landra
EV541916       <-- AGAGGCTCTGAGGAGGGCTAAGTTTAAGTTCCCTGGTCGTCAAAAGATTA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY919671       <-- AGAGGCTTTGAGGAGGGCTAAGTTTAAGTTCCCTGGTCGTCAGAAGATTA  Raphanus raphanistrum subsp. landra
FD958928       <-- AGAGGCTTTGAGGAGGGCTAAGTTTAAGTTCCCCGGTCGTCAGAAGATTA  Raphanus raphanistrum subsp. maritimus
EV572081       <-- AGAGGCTTTGAGGAGGGCTAAGTTTAAGTTCCCTGGTCGCCAAAAGATTA  Raphanus raphanistrum subsp. landra
EY919120       <-- AGAGGCTTTGAGGAGGGCTAAGTTTAAGTTCCCTGGTCGTCAGAAGATTA  Raphanus raphanistrum subsp. landra
EY911314       <-- AAAGGCTTTGAGGAGGGCTAAGTTTAAGTTCCCTGGTCGTCAAAAGATTA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY934562       <-- AGAGGCTCTGAGGAGGGCTAAGTTTAAGTTCCCTGATCGTCAAAAGATTA  Raphanus sativus cv Early Scarlet Globe
EV537741       --> AGAGGCTCTGAGGAGGGCTAAGTTTAAGTTCCCTGGTCGTCAAAAGATTA  Raphanus raphanistrum subsp. raphanistrum (MS)
EW725221       --> AGAGGCTCTGAGGAGGGCTAAGTTTAAGTTCCCTGGTCGTCAAAAGATTA  Raphanus sativus cv Early Scarlet Globe
EY923943       --> AGAGGCTTTGAGGAGGGCTAAGTTTAAGTTCCCTGGTCGTCAGAAGATTA  Raphanus raphanistrum subsp. landra
EY938413       --> AGAGGCTCTGAGGAGGGCTAAGTTTAAGTTCCCTGATCGTCAAAAGATTA  Raphanus sativus cv Early Scarlet Globe
EY915477       --> AAAGGCTCTGAGGAGGGCTAAGTTTAAGTTCCCTGGTCGTCAAAAGATTA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY923216       --> AGAGGCTTTGAGGAGGGCTAAGTTTAAGTTCCCTGGTCGTCAGAAGATTA  Raphanus raphanistrum subsp. landra
EV567079       --> AGAGGCTTTGAGGAGGGCTAAGTTTAAGTTCCCTGGTCGCCAAAAGATTA  Raphanus raphanistrum subsp. landra
EY923314       --> AGAGGCTTTGAGGAGGGCTAAGTTTAAGTTCCCTGGTCGTCAGAAGATTA  Raphanus raphanistrum subsp. landra
FD962349       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD577416       --> AGAGGCTTTGAGGAGGGCTAAGTTTAAGTTCCCTGGTCGTCAAAAGATTA  Raphanus sativus cv Rat-Tail Radish #3870
EY933337       --> AGAGGCTCTGAGGAGGGCTAAGTTTAAGTTCCCTGGTCGTCAAAAGATTA  Raphanus sativus var. oleiformis

               551    -    601
UN21243        --> TCGTCAGCAGGAAATGGGGTTTTACTAAGTTTAACAGAGCAGACTTTACC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY919035       <-- TCGTCAGCAGGAAATGGGGTTTTACCAAGTTTAACAGAGCAGACTTTACC
EV541916       <-- TCGTCAGCAGGAAATGGGGTTTTACTAAGTTTAACAGAGCAGACCTTACC
EY919671       <-- TCGTCAGCAGGAAATGGGGTTTTACCAAGTTTAACAGGGCAGACTTTACC
FD958928       <-- TCGTCAGCAGGAAATGGGGTTTTACCAAGTTTAACAGAGCAGACTTTACC
EV572081       <-- TCGTCAGCAGGAAATGGGGTTTTACTAAGTTCAACAGAGCAGACTTTACC
EY919120       <-- TCGTCAGCAGGAAATGGGGTTTTACCAAGTTTAACAGAGCGGACTTTACC
EY911314       <-- TCGTCAGCAGGAAATGGGGTTTTACTAAGTTTAACAGAGCAGACTTTACC
EY934562       <-- TCGTCAGCAGGAAATGGGGTTTTACTAAGTTTAACAGAGCAGACTTTACC
EV537741       --> TCGTCAGCAGGAAATGGGGTTTTACTAAGTTTAACAGAGCAGACCTTACC
EW725221       --> TCGTCAGCAGGAAATGGGGTTTTACTAAGTTTAACAGAGCAGACTTTACC
EY923943       --> TCGTCAGCAGGAAATGGGGTTTTACCAAGTTTAACAGGGCAGACTTTACC
EY938413       --> TCGTCAGC..........................................
EY915477       --> TCGTCAGCAGGAAATGGGGTTTTACTAAGTTTAACAGAGCAGACTTTACC
EY923216       --> TCGTCAGCAGGAAATGGGGTTTTACCAAGTTTAACAGAGCAGACTTTACC
EV567079       --> TCGTCAGCAGGAAATGGGGTTTTACTAAGTTCAACAGAGCAGACTTTACC
EY923314       --> TCGTCAGCAGGAAATGGGGTTTTACCAAGTTTAACAGAGCGGACTTTACC
FD962349       --> ..................................................
FD577416       --> TCGTCAGCAGGAAATGGGGTTTTACCAAGTTTAACAGAGCAGACTTTACC
EY933337       --> TCGTCAGCAGGAAATGGGGTTTTACTAAGTTTAACAGAGCAGACTTTACC

               601    -    651
UN21243        --> AAGTTGAGGCAAGAGAAGCGTGTTGTCCCTGATGGTGTTAATGCTAAGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY919035       <-- AAGTTGAGGCAAGAGAAGCGTGTTGTCCCTGATGGTGTTAATGCTAAGTT
EV541916       <-- AAGTTGAGGCAAGAGAAGCGTGTTGTCCCTGATGGTGTTAATGCTAAGTT
EY919671       <-- AAGTTGAGGCAAGAGAAGCGTGTTGTCCCTGATGGTGTTAATGCTAAGTT
FD958928       <-- AAGTTGAGGCAAGAGAAGCGTGTTGTCCCTGATGGTGTTAATGCTAAGTT
EV572081       <-- AAGTTGAGGCAAGAGAAGCGTGTTGTCCCTGATGGTGTTAATGCTAAGTT
EY919120       <-- AAGTTGAGGCAAGAGAAGCGTGTTGTCCCTGATGGTGTTAATGCTAAGTT
EY911314       <-- AAGTTGAGGCAAGAGAAGCGTGTTGTCCCTGATGGTGTTAATGCTAAGTT
EY934562       <-- AAGTTGAGGCAAGAGAAGCGTGTTGTCCCTGATGGTGTTAATGCTAAGTT
EV537741       --> AAGTTGAGGCAAGAGAAGCGTGTTGTCCCTGATGGTGTTAATGCTAAGTT
EW725221       --> AAGTTGAGGCAAGAGAAGCGTGTTGTCCCTGATGGTGTTAATGCTAAGTT
EY923943       --> AAGTTGAGGCAAGAGAAGCGTGTTGTCCCTGATGGTGTTAATGCTAAGTT
EY938413       --> ..................................................
EY915477       --> AAGTTGAGGCAAGAGAAGCGTGTTGTCCCTGATGGTGTTAATGCTA....
EY923216       --> AAGTTGAGGCAAGAGAAGCGTGTTGTCCCTGATGGTGTTAATGCTAAGTT
EV567079       --> AAGTTGAGGCAAGAGAAGCGTGTTGTCCCTGATGGTGTTAATGCTAAGTT
EY923314       --> AAGTTGAGGCAAGAGAAGCGTGTTGTCCCTGATGGTGTTAATGCTAAGTT
FD962349       --> ..................................................
FD577416       --> AAGTTGAGACAAGAGAAGCGTGTTGTCCCTGATGGTGTTAATGCTAAGTT
EY933337       --> AAGTTGAGGCAAGAGAAGCGTGTTGTCCCTGATGGTGTTAATGCTAAGTT

               651    -    701
UN21243        --> CCTCTCATGTCATGGACCTTTGGCTAACCGTCAGCCGGGAAGTGCATTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY919035       <-- CCTCTCATGTCATGGACCTTTGGCTAACCGTCAGCCGGGAAGTGCATTTT  Raphanus raphanistrum subsp. landra
EV541916       <-- CCTCTCATGTCATGGACCTTTGGCTAACCGTCAGCCGGGAAGTGCATTTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY919671       <-- CCTCTCATGTCATGGACCTTTGGCTAACCGTCAGCCGGGAAGTGCATTTT  Raphanus raphanistrum subsp. landra
FD958928       <-- CCTCTCATGTCATGGACCTTTGGCTAACCGTCAGCCGGGAAGTGCATTTT  Raphanus raphanistrum subsp. maritimus
EV572081       <-- CCTCTCATGTCACGGACCTTTGGCTAACCGTCAGCCGGGAAGTGCATTTT  Raphanus raphanistrum subsp. landra
EY919120       <-- CCTCTCATGTCATGGACCTTTGGCTAACCGTCAGCCGGGAAGTGCATTTT  Raphanus raphanistrum subsp. landra
EY911314       <-- CCTTTCGTGTCATGGACCTTTGGCTAACCGTCAGCCGGGAAGTGCATTTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY934562       <-- CCTTTCGCGTCATGGACCTTTGGCTAACCGTCAGCCGGGAAGTGCATTTT  Raphanus sativus cv Early Scarlet Globe
EV537741       --> CCTCTCATGTCATGGACCTTTGGCTAACCGTCAGCCGGGAAGTGCATTTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EW725221       --> CCTTTCGTGTCATGGACCTTTGGCTAACCGTCAGCCGGGAAGTGCATTTT  Raphanus sativus cv Early Scarlet Globe
EY923943       --> CCTCTCATGTCATGGACCTTTGGCTAACCGTCAGCCGGGAAGTGCATTTT  Raphanus raphanistrum subsp. landra
EY938413       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EY915477       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY923216       --> CCTCTCATGTCATGGACCTTTGGCTAACCGTCAGCCGGGAAGTGCATTTT  Raphanus raphanistrum subsp. landra
EV567079       --> CCTCTCATGTCACGGACCTTTGGCTAACCGTCAGCCGGGAAGTGCATTTT  Raphanus raphanistrum subsp. landra
EY923314       --> CCTCTCATGTCATGGACCTTTGGCTAACCGTCA.................  Raphanus raphanistrum subsp. landra
FD962349       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD577416       --> CCTCTCATGTCACGGACCTTTGGCTAACCGTCAG................  Raphanus sativus cv Rat-Tail Radish #3870
EY933337       --> CCTTTCGTGTCATGGACCTTTGGCTAACCGTCAGCCGGGAAGTGCATTTT  Raphanus sativus var. oleiformis

               701    -    751
UN21243        --> TGCCAGCCACCTATTAAAGTTTCAGGACTGTAGTCTACTCTTTCCTCTCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY919035       <-- TGCCAGCCACCTATTAAAGTTTCAGGACTGTAGTCTACTCTTTCCTCTCC
EV541916       <-- TGCCAGCCACCTATTAAAGTTTCAGGACTGTAGTCTACTCTTTCCTCTCC
EY919671       <-- TGCCAGCCACCTATTAAAGTTTCAGGACTGTAGTCTACTCTTTCCTCTCC
FD958928       <-- TGCCAGCCACCTATTAAAGTTTCAGGACTGTAGTCTACTCTTTCCTCTCC
EV572081       <-- TGCCAGCCACCTATTAAAGTTTCAGGACTGTAGTCTACTCTTTCCTCTCC
EY919120       <-- TGCCAGCCACCTATTAAAGTTTCAGGACTGTAGTCTACTCTTTCCTCTCC
EY911314       <-- TGCCAGCCACCTATTGAAGTTTCAGGACTGTAGTCTACTCTTTCCTCTCC
EY934562       <-- TGCCAGCCACCTATTGAAGTTTCCGGACTGTAGTCTACTCTTTCCTCTCC
EV537741       --> TGCCAGCCACCTATTAAAGTTTCAGGACTGTAGTCTAC............
EW725221       --> -G-CAG-CACCTATT-GAGTTTCAG-ACTGTAGTCTACTCTTTCCTCTCC
EY923943       --> TGCCAGCCACCTATTAAAGTTTCAG-ACTGTAGTCTACTCTTTCCTCTCC
EY938413       --> ..................................................
EY915477       --> ..................................................
EY923216       --> TGCCAGCCACCTATTAAAGT..............................
EV567079       --> TGCCAGCCACCTATTAAAGTTTCAGGACTGTAGTCTACTCTTTCCTCTCC
EY923314       --> ..................................................
FD962349       --> ..................................................
FD577416       --> ..................................................
EY933337       --> TGTCAGCCACCTATTGAAGTTTCAGGACTGTAGTCTACTCTTTCCTCTCC

               751    -    801
UN21243        --> CGTGAAGAGTTGTATTGAGTCCGAATCATTTTACTTTTATCCTTGAAATT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY919035       <-- CGTCAAGAGTTATATTGAGTCCGAATCATTTTACTTTTATCCTTGAAATT
EV541916       <-- CGTGAAGAGTTGTATTGAGTCTGAATCATTTTACTTTTATCCTTGAAAGT
EY919671       <-- CGTCAAGAGTTATATTGAGTCCGAATCATTTTACTTTTATCCTTGAAATT
FD958928       <-- CGTCAAGAGTTATATTGAGTCCGAATCATTTTACTTTTATCCTTGAAATT
EV572081       <-- CGTGAAGAGTTGTATTGAGTCTGAATCATTTTACTTTTATCCTTAAAATT
EY919120       <-- CGTCAAGAGTTATATTGAGTCCGAATCATTTTACTTTTATCCTTGAAATT
EY911314       <-- CGTGAAGAGTTGTATTGAGTCCGAATCATTTTACTTTCATCCTTGAAATT
EY934562       <-- CGTGAAGAGTTGTATTGAGTCCGAATCATTTTACTTTCATCCTTGAAATT
EV537741       --> ..................................................
EW725221       --> CGTGA-GAG-TGTA-TGAGTCCGA-TCATT....................
EY923943       --> CGTCAAGAGTTATATTGAGTCCGAAT........................
EY938413       --> ..................................................
EY915477       --> ..................................................
EY923216       --> ..................................................
EV567079       --> CGTGAAGAGTTGTATTGAGTCTGAATCATTTTACTTTTATCCTTAAAATT
EY923314       --> ..................................................
FD962349       --> ..................................................
FD577416       --> ..................................................
EY933337       --> CGTGAAGAGTTGTATTGAGTCCGAATCATTTTACTTTCATCCTTGAAATT

               801    -    851
UN21243        --> ATTGTTAAGT-TTTTT-AGTTTGGACACA--TTCAGTATTATGAATCTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY919035       <-- ATTGTTAAGT-TTTTT-AGTTTGGACACA--TTCAGTATTATGAATCTTT
EV541916       <-- ATTGTTAAGTCTTTTT-AGTTTGGACACA--TTGAGCAGTATGAATCTTT
EY919671       <-- ATTGTTAAGT-TTTTT-AGTTTGGACACA--TTCAGTATTATGAATCTTT
FD958928       <-- ATTGTTAAGT-TTTTT-AGTTTGGACACA--TTCAGTATTATGAATCTTT
EV572081       <-- ATTGTTAAGT-TTTTT-AGTTTGGACACACATTCAGTATTATGAAGCTTT
EY919120       <-- ATTGTTAAGT-TTTTT-AGTTTGGACACA--TTCAGTATTATGAATCTTT
EY911314       <-- ATTGTTAAGT-TTTTTTAGTTTGGACACA--TTCAGTATTATGAATCTTT
EY934562       <-- ATTGTTAAGT-TTTTTTAGTTTGGACACA--TTCAGTATTATGAATCTTT
EV537741       --> ..................................................
EW725221       --> ..................................................
EY923943       --> ..................................................
EY938413       --> ..................................................
EY915477       --> ..................................................
EY923216       --> ..................................................
EV567079       --> ATTGTTAAGT-TTTTT-AGTTTGGACACAcatt.................
EY923314       --> ..................................................
FD962349       --> ..................................................
FD577416       --> ..................................................
EY933337       --> ATTGTTAAGT-TTTTTTAGTTTGGACACA--TTCAGTATTATGAATCTTT

               851    -    901
UN21243        --> GTGAAATGATATTTTTGCTATTTCTATGTTGCTCCTTTTGCAAGTTTTGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY919035       <-- GTGAAATGATATTTTTGCTATTTCTATGTTGCTCCTTTTGC.........
EV541916       <-- GTGAAACGACATTTT-GCTATTTCTATGTTGCTCCTTTTG..........
EY919671       <-- GTGAAATGATATTTTTGCTATTTCTATGTTGCTCCTTTTGCAAGTTTTGT
FD958928       <-- GTGAAATGATATTTTTGCT...............................
EV572081       <-- GTGAAATGATATTTTTGCTATTTCTATGTTGCTCCTTTTGCAAGTTTTGT
EY919120       <-- GTGAAATGATATTTTTGCTATTTCTATGTTGCTCCTTTTGC.........
EY911314       <-- GTGAAATGATATT.....................................
EY934562       <-- GTGAAATGATATTTTTGCTATTTCTATGTTGCTCCTTTTGC.........
EV537741       --> ..................................................
EW725221       --> ..................................................
EY923943       --> ..................................................
EY938413       --> ..................................................
EY915477       --> ..................................................
EY923216       --> ..................................................
EV567079       --> ..................................................
EY923314       --> ..................................................
FD962349       --> ..................................................
FD577416       --> ..................................................
EY933337       --> GTGAAATGATATTTTTGCTATTTCTATGTTGCTCCTTTTG..........

               901    -    951
UN21243        --> CGTGTCTGCTATTTACTTTTCATTGCTTAACTTTCGTTTTTACTATCTAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY919035       <-- ..................................................
EV541916       <-- ..................................................
EY919671       <-- CGTGTCTGCTATTTACTTTTCATTACTTAACTTTCGTTTTTcc.......
FD958928       <-- ..................................................
EV572081       <-- CGTGTCTGCTATTGACTTCTCATTGCTAAACCTTCATTTTTACTATCTAC
EY919120       <-- ..................................................
EY911314       <-- ..................................................
EY934562       <-- ..................................................
EV537741       --> ..................................................
EW725221       --> ..................................................
EY923943       --> ..................................................
EY938413       --> ..................................................
EY915477       --> ..................................................
EY923216       --> ..................................................
EV567079       --> ..................................................
EY923314       --> ..................................................
FD962349       --> ..................................................
FD577416       --> ..................................................
EY933337       --> ..................................................