1      -     51
UN21248        --> GGGTTTTCGCAATTCTAAACCCTAAAGCTTGGCCGACTGACTCAGATCGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX756882       --> GGGTTTTCGCAATTCTAAACCCTAAAGCTTGGCCGACTGACTCAGATCGT
EY899171       --> GGGTTTTCGCAATTCTAAACCCTAAAGCTTGGCCGACTGACTCAGATCGT
EY907369       --> .agggTTCGCAATTCTAAACCCTAAAGCTTGGCCGACTGACTCAGATCGT
EV525159       --> ......ggGCAATTCTAAACCCTAAAGCTTGGCCGACTGACTCAGATCGT
FD970245       --> ......ggGCAATTCTAAACCCTAAAGCTTGGCCGACTGACTCAGATCGT
FD534061       --> ........ggAATTCTAAACCCTAAAGCTTGGCCGACTGACTCAGATCGT
EX757596       --> ...........................................gGATCGT
EY913491       --> ..................................................

               51     -    101
UN21248        --> GATCCTTCCCTAAACCCTGACATCGCCGGTGACCTAGAGCTGAGCTAAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX756882       --> GATCCTTCCCTAAACCCTGACATCGCCGGTGACCTAGAGCTGAGCTAAAG
EY899171       --> GATCCTTCCCTAAACCCTGACATCGCCGGTGACCTAGAGCTGAGCTAAAG
EY907369       --> GATCCTTCCCTAAACCCTGACATCGCCGGTGACCTAGAGCTGAGCTAAAG
EV525159       --> GATCCTTCCCTAAACCCTGACATCGCCGGTGACCTAGAGCTGAGCTAAAG
FD970245       --> GATCCTTCCCTAAACCCTGACATCGCCGGTGACCTAGAGCTGAGCTAAAG
FD534061       --> GATCCTTCCCTAAACCCTGACATCGCCGGTGACCTAGAGCTGAGCTAAAG
EX757596       --> GATCCTTCCCTAAACCCTGACATCGCCGGTGACCTAGAGCTGAGCTAAAG
EY913491       --> ..................................................

               101    -    151
UN21248        --> GTCTTAAGAAATGAGTTTCAACAAAGTGCCCAACGTCCCTGGATCTCCTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX756882       --> GTCTTAAGAAATGAGTTTCAACAAAGTGCCCAACGTGCCTGGATCTCCTG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY899171       --> GTCTTAAGAAATGAGTTTCAACAAAGTGCCCAACGTCCCTGGATCTCCAG  Raphanus raphanistrum subsp. maritimus
EY907369       --> GTCTTAA--AATGAGTTTCAACAAAGTGCCCAACGTCCCTGGATCTCCTG  Raphanus raphanistrum subsp. raphanistrum (MS)
EV525159       --> GTCTTAAGAAATGAGTTTCAACAAAGTACCCAACGTCCCTGGATCTCCAG  Raphanus raphanistrum subsp. maritimus
FD970245       --> GTCTTAAGAAATGAGTTTCAACAAAGTGCCCAACGTGCCTGGATCTCCTG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD534061       --> GTCTTAAGAAATGAGTTTCAACAAAGTGCCCAACGTCCCTGGATCTCCAG  Raphanus raphanistrum subsp. maritimus
EX757596       --> GTCTTAAGAAATGAGTTTCAACAAAGTGCCCAACGTCCCTGGATCTCCTG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY913491       --> ...........gGAGTTTCAACAAAGTGCCCAACGTCCCTGGATCTCCTG  Raphanus raphanistrum subsp. raphanistrum (NY)

               151    -    201
UN21248        --> CTCTCTCTGCACTTCTTAAGGTCAGCGTTATTGGTGGGCTCGGTGTCTAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX756882       --> CTCTCTCTGCACTTCTTAAGGTCAGCGTTATTGGTGGGCTCGGTGTCTAT
EY899171       --> CTCTCTCTGCACTTCTTAAGGTCAGCGTTATTGGTGGGCTCGGTGTCTAT
EY907369       --> CTCTCTCTGCACTTCTTAAGGTCAGCGTTATTGGTGGGCTCGGTGTCTAT
EV525159       --> CTCTCTCTGCACTTCTTAAGGTCAGCGTTATTGGTGGGCTCGGTGTCTAT
FD970245       --> CTCTCTCTGCACTTCTTAAGGTCAGCGTTATTGGTGGGCTCGGTGTCTAT
FD534061       --> CTCTCTCTGCACTTCTTAAGGTCAGCGTTATTGGTGGGCTCGGTGTCTAT
EX757596       --> CCCTCTCTGCACTTCTTAAGGTCAGCGTTATTGGTGGGCTCGGTGTCTAT
EY913491       --> CTCTCTCTGCACTTCTTAAGGTCAGCGTTATTGGTGGGCTCGGTGTCTAT

               201    -    251
UN21248        --> GCTTTGACTAATAGCCTGTACAATGTTGAGGGTGGACATCGTGCTGTCAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX756882       --> GCTTTGACTAATAGCCTGTACAATGTTGAGGGTGGACATCGTGCTGTCAT
EY899171       --> GCTTTGACTAATAGCCTGTACAATGTTGAGGGTGGACATCGTGCTGTCAT
EY907369       --> GCTTTGACTAATAGCCTGTACAATGTTGAGGGTGGACACCGTGCTGTCAT
EV525159       --> GCTTTGACTAATAGCCTGTACAATGTTGAGGGTGGACATCGTGCTGTCAT
FD970245       --> GCTTTGACTAATAGCCTGTACAATGTTGAGGGTGGACATCGTGCTGTCAT
FD534061       --> GCTTTGACTAATAGCCTGTACAATGTTGAGGGTGGACATCGTGCTGTCAT
EX757596       --> GCTTTGACTAATAGCCTGTACAATGTTGAGGGTGGACACCGTGCTGTCAT
EY913491       --> GCTTTGACTAATAGCCTGTACAATGTTGAGGGTGGACACCGTGCTGTCAT

               251    -    301
UN21248        --> GTTCAACCGATTGACTGGTATCAAGGAAAAGGTTTACCCGGAAGGAACGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX756882       --> GTTCAACCGATTGACTGGTATCAAGGAAAAGGTTTACCCGGAAGGAACGC
EY899171       --> GTTCAACCGATTGACTGGTATCAAGGAAAAGGTTTACCCGGAAGGAACGC
EY907369       --> GTTCAACCGATTGACTGGTATCAAGGAAAAGGTTTACCCGGAAGGAACGC
EV525159       --> GTTCAACCGATTGACTGGTATCAAGGAAAAGGTTTACCCGGAAGGAACGT
FD970245       --> GTTCAACCGATTGACTGGTATCAAGGAAAAGGTTTACCCGGAAGGAACGC
FD534061       --> GTTCAACCGATTGACTGGTATCAAGGAAAAGGTTTACCCGGAAGGAACGC
EX757596       --> GTTCAACCGATTGACTGGTATCAAGGAAAAGGTTTACCCGGAAGGAACGC
EY913491       --> GTTCAACCGATTGACTGGTATCAAGGAAAAGGTTTACCCGGAAGGAACAC

               301    -    351
UN21248        --> ATTTTATGTTGCCATGGTTTGAGAGGCCAATAATCTATGACGTCCGTGCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX756882       --> ATTTTATGTTGCCATGGTTTGAGAGGCCAATAATCTATGACGTCCGTGCA
EY899171       --> ATTTTATGTTGCCATGGTTTGAGAGGCCAATAATCTATGTCGTCCGTGCA
EY907369       --> ATTTTATGTTGCCATGGTTTGACAGGCCAATAATC...............
EV525159       --> ATTTTATGTTGCCATGGTTTGAGAGGCCAATAATCTATGACGTCCGTGCA
FD970245       --> ATTTTATGTTGCCATGGTTTGAGAGGCCAATAATCTAT--CGTCCGTGCA
FD534061       --> ATTTTATGTTGCCATGGTTTGAGAGGCCAATAATCTATGACGTCCGTGCA
EX757596       --> ATTTTATGTTGCCATGGTTTGAGAGGCCAATAATCTATGACGTCCGTGCA
EY913491       --> ATTTTATGTTGCCATGGTTTGAGAGGCCAATAATCTATGACGTCCGTGCA

               351    -    401
UN21248        --> CGACCCTATCTTGTGGAGAGCACCACTGGTAGTCATGACCTTCAGATGGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX756882       --> CGACCCTATCTTGTGGAGAGCACCACTGGTAGTCATGACCTTCAGATGGT
EY899171       --> CGACCCTATCTTGTGGAGAGCACCACTGGTAGTCATGACCTTCAGATGGT
EY907369       --> ..................................................
EV525159       --> CGACCCTATCTTGTGGAGAGCACCACTGGTAGTCATGACCTTCAGATGGT
FD970245       --> CGACCCTATCTTGTGGAGAGCACCACTGGTAGTCATGACCTTCAGATGGT
FD534061       --> CGACCCTATCTTGTGGAGAGCACCACTGGTAGTCATGACCTTCAGATGGT
EX757596       --> CGACCCTATCTTGTGGAGAGCACCACTGGTAGTCATGACCTTCAGATGGT
EY913491       --> CGACCCTATCTTGTGGAGAGCACCACTGGTAGTCATGACCTTCAGATGGT

               401    -    451
UN21248        --> GAAAGTTGGACTTAGGGTTCTCACTCGTCCCATGGGTGACCGTTTGCCTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX756882       --> GAAAGTTGGACTTAGGGTTCTCACTCGTCCCATGGGTGACCGTTTGCCCC
EY899171       --> GAAAGTTGGACTTAGGGTTCTCACTCGTCCCATGGGTGACCGTTTGCCTC
EY907369       --> ..................................................
EV525159       --> GAAAGTTGGACTTAGGGTTCTCACTCGTCCCATGGGTGACCGTTTTCCTC
FD970245       --> GAAAGTTGGACTTAGGGTTCTCACTCGTCCCATGGGTGACCGTTTGCCTC
FD534061       --> GAAAGTTGGACTTAGGGTTCTCACTCGTCCCATGGGTGACCGTTTGCCTC
EX757596       --> GAAAGTTGGACTTAGGGTTCTCACTCGTCCCATGGGTGACCGTTTGCCTC
EY913491       --> GAAAGTTGGACTTAGGGTTCTCACTCGTCCCATGGGTGACCGTTTGCCTC

               451    -    501
UN21248        --> ATATTTACCGAACCCTAGGCGAGAATTACAGTGAAAGGGTTCTTCCTTCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX756882       --> ATATTTACCGAACCCTAGGCGAGAATTACAGTGAAAGGGTTCTTCCTTCC
EY899171       --> ATATTTACCGAACCCTAGGCGAGAATTACAGTGAAAGGGTTCTTCCTTCC
EY907369       --> ..................................................
EV525159       --> ATATTTACCGAACCCTAGGCGAGAATTACAGTGAAAGGGTTCTTCCTTCC
FD970245       --> ATATTTACCGAACCCTAGGCGAGAATTACAGTGAAAGGGTTCTTCCTTCC
FD534061       --> ATATTTACCGAACCCTAGGCGAGAATTACAGTGAAAGGGTTCTTCCTTCC
EX757596       --> ATATTTACCGAACCCTAGGCGAGAATTACAGTGAAAGGGTTCTTCCTTCC
EY913491       --> ATATTTACCGAACCCTAGGCGAGAATTACAGTGAAAGGGTTCTTCCTTCC

               501    -    551
UN21248        --> ATCATCCATGAAACCCTAAAAGCTGTGGTGGCTCAGTACAATGCAAGCCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX756882       --> ATCATCCATGAAACCCTAAAAGCTGTGGTGGCTCAGTACAATGCAAGCCA
EY899171       --> ATCATCCATGAAACCCTAAAAGCTGTGGTGGCTCAGTACAATGCAAGCCA
EY907369       --> ..................................................
EV525159       --> ATCATCCATGAAACCC-AAAAGCTGTGGTGGCTCAGTACAATGCAAGCCA
FD970245       --> ATCATCCATGAAACCCTAAAAGCTGTGGTGGCTCAGTACAATGCAAGCCA
FD534061       --> ATCATCCATGAAACCCTAAAAGCTGTGGTGGCTCAGTACAATGCAAGCCA
EX757596       --> ATCATCCATGAAACCCTAAAAGCTGTGGTGGCTCAGTACAATGCAAGCCA
EY913491       --> ATCATCCATGAAACCCTAAAAGCTGTGGTGGCTCAGTACAATGCAAGCCA

               551    -    601
UN21248        --> GCTGATCACCCAGAGAGAAGCTGTGAGCAGAGAGATACGCAAGATCCTGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX756882       --> GCTGATCACTCAGAGAGAAGCTGTGAGCAGAGAGATACGCAAGATCCTGA
EY899171       --> GCTGATCACCCAGAGAGAAGCTGTGAGCAGGGAGATACGCAAGATCCTGA
EY907369       --> ..................................................
EV525159       --> GCTGATCACCCAGAGAGAAGCTGTGAGCAGAGAGATACGCAAGATCCTGA
FD970245       --> GCTGATCACTCAGAGAGAAGCTGTGAGCAGAGAGATACGCAAGATCCTGA
FD534061       --> GCTGATCACCCAGAGAGAAGCTGTGAGCAGAGAGATACGCAAGATCCTGA
EX757596       --> GCTGATCACCCAGAGAGAAGCTGTGAGCAGAGAGATACGCAAGATTCTGA
EY913491       --> GCTGATCACCCAGAGAGAAGCTGTGAGCAGAGAGATACGCAAGATTCTGA

               601    -    651
UN21248        --> CTGAGAGAGCTTCGAACTTCGACATCGCTCTTGATGATGTCTCCATCACG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX756882       --> CTGAGAGAGCTTCGAACTTCGACATCGCTCTTGATGATGTCTCCATCACG
EY899171       --> CTGAGAGAGCTT......................................
EY907369       --> ..................................................
EV525159       --> CTGAGAGAGCTTCGAACTTCGACATCGCTCTTGATGATGTCTCCATCACG
FD970245       --> CTGAGAGAGCTTCGAACTTCGACATCGCTCTTGATGATGTCTCCATCACG
FD534061       --> CTGAGAGAGCTTCGAACTTCGACATCGCTCTTGATGATGTCTCCATCACG
EX757596       --> CTGAGAGAGCTTCGAACTTCGACATCGCTCTTGATGATGTGTCCATCACG
EY913491       --> CTGAGAGAGCTTCGAACTTCGACATCGCTCTTGATGATGTCTCCATCACG

               651    -    701
UN21248        --> ACTCTCACATTTGGCAAAGAGTTCACCGCTGCAATCGAGGCAAA-CAAGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX756882       --> ACTCTCACATTTGGCAAAGAGTTCACCGCTGCAATCGAGGCAAA-CA-GT
EY899171       --> ..................................................
EY907369       --> ..................................................
EV525159       --> ACTCTCACATTTGGCAAAGAGTTCACCGCTGCAATCGAGGCAAAACAAGT
FD970245       --> ACTCTCACATTTGGCAAAGAGTTCACCGCTGCAATC..............
FD534061       --> ACTCTCACATTTGGCAAAGAGTTCACCGCTGCAATCGAGGCAAA-CAAGT
EX757596       --> ACTCTCACATTTGGCAAAGAGTTCACCGCTGCAATCGAGGCAAA-CAAGT
EY913491       --> ACTCTCACATTTGGCAAAGAGTTCACCGCTGCAATCGAGGCAAAACAAGT

               701    -    751
UN21248        --> CGCTGCTCAGACGCTGAACGTGCTAAGTTCATTGTGGAGAAAGCCGAGCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX756882       --> CGCTGCTCAGACGCTGAACGTGCTAAGTTCA...................
EY899171       --> ..................................................
EY907369       --> ..................................................
EV525159       --> CGCTGCTC..........................................
FD970245       --> ..................................................
FD534061       --> CGCTGCTCAGACGCTGAACGTGCTAAGTTCATTGTGGAGAAAGCCG....
EX757596       --> CGCTGCTCAGACGCTGAACGTGCTAAGTTCATTGTGGAGAA-GCCGAGCA
EY913491       --> CGCTGCTCAGACGCTGAACGTGCTAAGTTCATTGTGGAGAAAGCCGAGCA

               751    -    801
UN21248        --> AGACAAGAGAAGTGCAGTCATCCGTGCGGAGGGAGAAGCTAAAGTGCTCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX756882       --> ..................................................
EY899171       --> ..................................................
EY907369       --> ..................................................
EV525159       --> ..................................................
FD970245       --> ..................................................
FD534061       --> ..................................................
EX757596       --> -GAC-AGAG-AGTGCAGTCAT.............................
EY913491       --> AGACAAGAGAAGTGCAGTCATCCGTGCGGAGGGAGAAGCTAAAGTGCTCA

               801    -    851
UN21248        --> ACTTATCGGACAAGCTATTGCAAATAATCAGCATTCATAACTCTGAGAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX756882       --> ..................................................
EY899171       --> ..................................................
EY907369       --> ..................................................
EV525159       --> ..................................................
FD970245       --> ..................................................
FD534061       --> ..................................................
EX757596       --> ..................................................
EY913491       --> ACTTATCGGACAAGCTATTGCAAATAATCAGCATTCATAACTCTGAGAAA

               851    -    901
UN21248        --> GATGAAGCTGCGAGAGAGATGCTCAGACATGCACAATCAGCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX756882       --> ..........................................
EY899171       --> ..........................................
EY907369       --> ..........................................
EV525159       --> ..........................................
FD970245       --> ..........................................
FD534061       --> ..........................................
EX757596       --> ..........................................
EY913491       --> GATGAAGCTGCGAGAGAGATGCTCAGACATGCACAATCAGCT