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Alignment for radish unigene UN21258

               1      -     51
UN21258        --> GGAATTCGTATCTCACACATACACGGGATAAACAAGGAACGCCGAAATAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD565629       <-- ..................................................
FD565614       <-- ..................................................
EX758588       <-- ..................................................
FD536594       <-- ..................................................
FD948076       --> GGAATTCGTATCTCACACATACACGGGATAAACAAGGAACGCCGAAATAA
FY445052       --> ..................................................
FY441530       --> ..................................................
FD561451       --> ..................................................
FD561471       --> ..................................................
EX896982       --> ..................................................
EX896514       --> ..................................................
FY451551       --> ..................................................
FY445600       --> ..................................................
FD971889       --> ..................................................
FD568721       --> ..................................................
FD540009       --> ..................................................

               51     -    101
UN21258        --> CGCGTTCATCTGGGTGATTTCTTTAATATATTTTCAATATTTTCCTATAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD565629       <-- ..................................................
FD565614       <-- ..................................................
EX758588       <-- ..................................................
FD536594       <-- ..................................................
FD948076       --> CGCGTTCATCTGGGTGATTTCTTTAATATATTTTCAATATTTTCCTATAT
FY445052       --> CGCGTTCATCTGGGTGATTTCTTTAATATATTTTCAATATTTTCCTATAT
FY441530       --> .GCGTTCATCTGGGTGATTTCTTTAATATATTTTCAATATTTTCCTATAT
FD561451       --> ..................................................
FD561471       --> ..................................................
EX896982       --> ..................................................
EX896514       --> ..................................................
FY451551       --> ..................................................
FY445600       --> ..................................................
FD971889       --> ..................................................
FD568721       --> ..................................................
FD540009       --> ..................................................

               101    -    151
UN21258        --> AATTAAATTACCCAGAAACGTAGTTTCGTTTGTGTTTCAAAGTTCAGTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD565629       <-- ..................................................
FD565614       <-- ..................................................
EX758588       <-- ..................................................
FD536594       <-- ..................................................
FD948076       --> AATTAAATTACCCAGAAACGTAGTTTCGTTTGTGTTTCAAAGTTCAGTTC
FY445052       --> AATTAAATTACCCAGAAACGTAGTTTCGTTTGTGTTTCAAAGTTCAGTTC
FY441530       --> AATTAAATTACCCAGAAACGTAGTTTCGTTTGTGTTTCAAAGTTCAGTTC
FD561451       --> .......ggACCCAGAAACGTAGTTTCGTTTGTGTTTCAAAGTTCAGTTC
FD561471       --> .......ggACCCAGAAACGTAGTTTCGTTTGTGTTTCAAAGTTCAGTTC
EX896982       --> .............................ggGTGTTTCAAAGTTCAGTTC
EX896514       --> ....................................TCAAAGTTCAGTTC
FY451551       --> ..................................................
FY445600       --> ..................................................
FD971889       --> ..................................................
FD568721       --> ..................................................
FD540009       --> ..................................................

               151    -    201
UN21258        --> CCAATATCATTTCTTTCCACAAGTAAAAAAAGATTCTTGTTGATAATCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD565629       <-- ..................................................
FD565614       <-- ..................................................
EX758588       <-- ..................................................
FD536594       <-- ..................................................
FD948076       --> CCAATATCATTTCTTTCCACAAGTAAAAAAAGATTCTTGTTGATAATCTT
FY445052       --> CCAATATCATTTCTTTCCACAAGTAAAAAAAGATTCTTGTTGATAATCTT
FY441530       --> CCAATATCATTTCTTTCCACAAGTAAAAAAAGATTCTTGTTGATAATCTT
FD561451       --> CCAATATCATTTCTTTCCACAAGTAAAAAAAGATTCTTGTTGATAATCTT
FD561471       --> CCAATATCATTTCTTTCCACAAGTAAAAAAAGATTCTTGTTGATAATCTT
EX896982       --> CCAATATCATTTCTTTCCACAAGTAAAAAAAGATTCTTGTTGATAATCTT
EX896514       --> CCAATATCATTTCTTTCCACAAGTAAAAAAAGATTCTTGTTGATAATCTT
FY451551       --> .............................AAGATTCTTGTTGATAATCTT
FY445600       --> .........................................GATAATCTT
FD971889       --> ..................................................
FD568721       --> ..................................................
FD540009       --> ..................................................

               201    -    251
UN21258        --> ATCTCTCTCTCTCTCAAAGAATCTCATACCCCTCCCTCCCTCGAATCTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD565629       <-- ..................................................
FD565614       <-- ..................................................
EX758588       <-- ..................................................
FD536594       <-- ..................................................
FD948076       --> ATCTCTCTCTCTCTCAAAGAATCTCATACCCCTCCCTCCCTCGAATCTTC
FY445052       --> ATCTCTCTCTCTCTCAAAGAATCTCATACCCCTCCCTCCCTCGAATCTTC
FY441530       --> ATCTCTCTCTCTCTCAAAGAATCTCATACCCCTCCCTCCCTCGAATCTTC
FD561451       --> ATCTCTCTCTCTCTCAAAGAATCTCATACCCCTCCCTCCCTCGAATCTTC
FD561471       --> ATCTCTCTCTCTCTCAAAGAATCTCATACCCCTCCCTCCCTCGAATCTTC
EX896982       --> ATCTCTCTCTCTCTCAAAGAATCTCATACCCCTCCCTCCCTCGAATCTTC
EX896514       --> ATCTCTCTCTCTC--AAAGAATCTCATACCCCTCCCTCCCTCGAATCTTC
FY451551       --> ATCTCTCTCTCTCTCAA-GAATCTCATACCCCTCCCTCCCTCGAATCTTC
FY445600       --> ATCTCTCTCTCTCTCAAAGAATCTCATACCCCTCCCTCCCTCGAATCTTC
FD971889       --> ..................................................
FD568721       --> ..................................................
FD540009       --> ..................................................

               251    -    301
UN21258        --> TTCTAGCGTTTAATCTACGTTTTCATCATCATTTCCCCATGGCGATCAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD565629       <-- ..................................................
FD565614       <-- ..................................................
EX758588       <-- ..................................................
FD536594       <-- ..................................................
FD948076       --> TTCTAGCGTTTAATCTACGTTTTCATCATCATTTCCCCATGGCGATCAAG
FY445052       --> TTCTAGCGTTTAATCTACGTTTTCATCATCATTTCCCCATGGCGATCAAG
FY441530       --> TTCTAGCGTTTAATCTACGTTTTCATCATCATTTCCCCATGGCGATCAAG
FD561451       --> TTCTAGCGTTTAATCTACGTTTTCATCATCATTTCCCCATGGCGATCAAG
FD561471       --> TTCTAGCGTTTAATCTACGTTTTCATCATCATTTCCCCATGGCGATCAAG
EX896982       --> TTCTAGCGTTTAATCTACGTTTTCATCATCATTTCCCCATGGCGATCAAG
EX896514       --> TTCTAGCGTTTAATCTACGTTTTCATCATCATTTCCCCATGGCGATCAAG
FY451551       --> TTCTAGCGTTTAATCTACGTTTTCATCATCATTTCCCCATGGCGATCAAG
FY445600       --> TTCTAGCGTTTAATCTACGTTTTCATCATCATTTCCCCATGGCGATCAAG
FD971889       --> ..................................................
FD568721       --> ..................................................
FD540009       --> ..................................................

               301    -    351
UN21258        --> AAGATGAACAGTTTGATCCCTACCTGCTCTTCCCCGGACGATCTGAAACG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD565629       <-- ..................................................
FD565614       <-- ..................................................
EX758588       <-- ..................................................
FD536594       <-- ..................................................
FD948076       --> AAGATGAACAGTTTGATCCCTACCTGCTCTTCCCCGGACGATCTGAAACG
FY445052       --> AAGATGAACAGTTTGATCCCTACCTGCTCTTCCCCGGACGATCTGAAACG
FY441530       --> AAGATGAACAGTTTGATCCCTACCTGCTCTTCCCCGGACGATCTGAAACG
FD561451       --> AAGATGAACAGTTTGATCCCTACCTGCTCTTCCCCGGACGATCTGAAACG
FD561471       --> AAGATGAACAGTTTGATCCCTACCTGCTCTTCCCCGGACGATCTGAAACG
EX896982       --> AAGATGAACAGTTTGATCCCCACCTGCTCTTCCCCGGACGATCTGAAACG
EX896514       --> AAGATGAACAGTTTGATCCCTACCTGCTCTTCCCCGGACGATCTGAAACG
FY451551       --> AAGATGAACAGTTTGATCCCTACCTGCTCTTCCCCGGACGATCTGAAACG
FY445600       --> AAGATGAACAGTTTGATCCCTACCTGCTCTTCCCCGGACGATCTGAAACG
FD971889       --> ...ggGAACAGTTTGATCCCAACCTGCTCTTCCCCGGATGATCTGAAACG
FD568721       --> ................................................gG
FD540009       --> ..................................................

               351    -    401
UN21258        --> CGTTCTCCAGACGCTAGGCTCGACCTGGGGAGACGTGGTCGAAGACCTCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD565629       <-- ..................................................  Raphanus sativus var. oleiformis
FD565614       <-- ..................................................  Raphanus sativus var. oleiformis
EX758588       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD536594       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD948076       --> CGTTCTCCAGACGCTAGGCTCGACCTGGGGAGACGTGGTCGAAGATCTCG  Raphanus sativus cv Early Scarlet Globe
FY445052       --> CGTTCTCCAGACGCTAGGCTCGACCTGGGGAGACGTGGTCGAAGACCTCG  Raphanus sativus cv GSK3-1
FY441530       --> CGTTCTCCAGACGCTAGGCTCGACCTGGGGAGACGTGGTCGAAGACCTCG  Raphanus sativus cv GSK3-1
FD561451       --> CGTTCTCCAGACGCTAGGCTCGACCTGGGGAGACGTGGTCGAAGACCTCG  Raphanus sativus var. oleiformis
FD561471       --> CGTTCTCCAGACGCTAGGCTCGACCTGGGGAGACGTGGTCGAAGACCTCG  Raphanus sativus var. oleiformis
EX896982       --> CGTTCTCCAGACGCTAGGCTCGACCTGGGGAGACGTGGTCGAAGATCTCG  Raphanus sativus cv Early Scarlet Globe
EX896514       --> CGTTCTCCAGACGCTAGGCTCGACCTGGGGAGACGTGGTCGAAGATCTCG  Raphanus sativus cv Early Scarlet Globe
FY451551       --> CGTTCTCCAGACGCTAGGCTCGACCTGGGGAGACGTGGTCGAAGACCTCG  Raphanus sativus cv GSK3-1
FY445600       --> CGTTCTCCAGACGCTAGGCTCGACCTGGGGAGACGTGGTCGAAGACCTCG  Raphanus sativus cv GSK3-1
FD971889       --> CGTTCTTCAGACGCTAGGCTCGACCTGGGGAGACGTGGTCGAAGATCTCG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD568721       --> CGTTCTCCAGACGCTAGGCTCGACCTGGGGAGACGTGGTCGAAGATCTCG  Raphanus sativus cv Early Scarlet Globe
FD540009       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)

               401    -    451
UN21258        --> AGAGCCTTGAGGTTGTTCCGTTGAAAGGAGCCATGACCAACGAGGTCTAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD565629       <-- ..................................................  Raphanus sativus var. oleiformis
FD565614       <-- ..................................................  Raphanus sativus var. oleiformis
EX758588       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD536594       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD948076       --> AGAGTCTTGAGGTTGTTCCGTTGAAAGGAGCCATGACCAACGAGGTTTAC  Raphanus sativus cv Early Scarlet Globe
FY445052       --> AGAGCCTTGAGGTTGTTCCGTTGAAAGGAGCCATGACCAACGAGGTCTAC  Raphanus sativus cv GSK3-1
FY441530       --> AGAGCCTTGAGGTTGTTCCGTTGAAAGGAGCCATGACCAACGAGGTCTAC  Raphanus sativus cv GSK3-1
FD561451       --> AGAGCCTTGAGGTTGTTCCGTTGAAAGGAGCCATGACCAACGAGGTCTAC  Raphanus sativus var. oleiformis
FD561471       --> AGAGCCTTGAGGTTGTTCCGTTGAAAGGAGCCATGACCAACGAGGTCTAC  Raphanus sativus var. oleiformis
EX896982       --> AGAGTCTTGAGGTTGTTCCGTTGAAAGGAGCCATGACCAACGAGGTTTAC  Raphanus sativus cv Early Scarlet Globe
EX896514       --> AGAGTCTTGAGGTTGTTCCGTTGAAAGGAGCCATGACCAACGAGGTTTAC  Raphanus sativus cv Early Scarlet Globe
FY451551       --> AGAGCCTTGAGGTTGTTCCGTTGAAAGGAGCCATGACCAACGAGGTCTAC  Raphanus sativus cv GSK3-1
FY445600       --> AGAGCCTTGAGGTTGTTCCGTTGAAAGGAGCCATGACCAACGAGGTCTAC  Raphanus sativus cv GSK3-1
FD971889       --> AGAGTCTTGAGGTTGTTCCGTTGAAAGGAGCCATGACCAACGAGGTTTAC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD568721       --> AGAGTCTTGAGGTTGTTCCGTTGAAAGGAGCCATGACCAACGAGGTTTAC  Raphanus sativus cv Early Scarlet Globe
FD540009       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)

               451    -    501
UN21258        --> CAGATCAACTGGCCTACCTTAAACGGAGGAGAAGATGCTCTTCACCGCAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD565629       <-- ..................................................  Raphanus sativus var. oleiformis
FD565614       <-- ..................................................  Raphanus sativus var. oleiformis
EX758588       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD536594       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD948076       --> CAGATCAACTGGCCTACCTTAAACGGAGGAGAAGATGCTCTTCACCGCAG  Raphanus sativus cv Early Scarlet Globe
FY445052       --> CAGATCAACTGGCCTACCTTAAACGGAGGAGAAGATGCTCTTCACCGCAG  Raphanus sativus cv GSK3-1
FY441530       --> CAGATCAACTGGCCTACCTTAAACGGAGGAGAAGATGCTCTTCACCGCAG  Raphanus sativus cv GSK3-1
FD561451       --> CAGATCAACTGGCCTACCTTAAACGGAGGAGAAGATGCTCTTCACCGCAG  Raphanus sativus var. oleiformis
FD561471       --> CAGATCAACTGGCCTACCTTAAACGGAGGAGAAGATGCTCTTCACCGCAG  Raphanus sativus var. oleiformis
EX896982       --> CAGATCAACTGGCCTACCTTAAACGGAGGAGAAGATGCTCTTCACCGCAG  Raphanus sativus cv Early Scarlet Globe
EX896514       --> CAGATCAACTGGCCTACCTTAAACGGAGGAGAAGATGCTCTTCACCGCAG  Raphanus sativus cv Early Scarlet Globe
FY451551       --> CAGATCAACTGGCCTACCTTAAACGGAGGAGAAGATGCTCTTCACCGCAG  Raphanus sativus cv GSK3-1
FY445600       --> CAGATCAACTGGCCTACCTTAAACGGAGGAGAAGATGCTCTTCACCGCAG  Raphanus sativus cv GSK3-1
FD971889       --> CAGATCAACTGGCCTACCTTAAACGGAGGAGAAGACGCTCCTCACCGCAG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD568721       --> CAGATCAACTGGCCTACCTTAAACGGAGGAGAAGATGCTCTTCACCGCAG  Raphanus sativus cv Early Scarlet Globe
FD540009       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)

               501    -    551
UN21258        --> AGTTCTTGTTCGGATCTACGGAGACGGCGTTGACCTTTTCTTCAACAGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD565629       <-- ..................................................  Raphanus sativus var. oleiformis
FD565614       <-- ..................................................  Raphanus sativus var. oleiformis
EX758588       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD536594       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD948076       --> GGTTCTTGTTCGGATCTACGGAGACGGCGTTGACCTTTTCTTCAACAGAG  Raphanus sativus cv Early Scarlet Globe
FY445052       --> AGTTCTTGTTCGGATCTACGGAGACGGCGTTGACCTTTTCTTCAACAGAG  Raphanus sativus cv GSK3-1
FY441530       --> AGTTCTTGTTCGGATCTACGGAGACGGCGTTGACCTTTTCTTCAACAGAG  Raphanus sativus cv GSK3-1
FD561451       --> AGTTCTTGTTCGGATCTACGGAGACGGCGTTGACCTTTTCTTCAACAGAG  Raphanus sativus var. oleiformis
FD561471       --> AGTTCTTGTTCGGATCTACGGAGACGGCGTTGACCTTTTCTTCAACAGAG  Raphanus sativus var. oleiformis
EX896982       --> GGTTCTTGTTCGGATCTACGGAGACGGCGTTGACCTTTTCTTCAACAGAG  Raphanus sativus cv Early Scarlet Globe
EX896514       --> GGTTCTTGTTCGGATCTACGGAGACGGCGTTGACCTTTTCTTCAACAGAG  Raphanus sativus cv Early Scarlet Globe
FY451551       --> AGTTCTTGTTCGGATCTACGGAGACGGCGTTGACCTTTTCTTCAACAGAG  Raphanus sativus cv GSK3-1
FY445600       --> AGTTCTTGTTCGGATCTACGGAGACGGCGTTGACCTTTTCTTCAACAGAG  Raphanus sativus cv GSK3-1
FD971889       --> AGTTCTTGTTCGGATCTACGGAGACGGCGTTGACCTTTTCTTCAACAGAG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD568721       --> GGTTCTTGTTCGGATCTACGGAGACGGCGTTGACCTTTTCTTCAACAGAG  Raphanus sativus cv Early Scarlet Globe
FD540009       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)

               551    -    601
UN21258        --> ACGACGAGATCAAAACCTTCGAGTGTATGTCTCATCACGGTTATGGACCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD565629       <-- ..................................................
FD565614       <-- ..................................................
EX758588       <-- ..................................................
FD536594       <-- ..................................................
FD948076       --> ACGACGAGATCAAAACCTTCGAGTGTATGTCTCATCACGGTTATGGACCT
FY445052       --> ACGACGAGATCAAAACCTTCGAGTGTATGTCTCATCACGGTTATGGACCT
FY441530       --> ACGACGAGATCAAAACCTTCGAGTGTATGTCTCATCACGGTTATGGACCT
FD561451       --> ACGACGAGATCAAAACCTTCGAGTGTATGTCTCATCACGGTTATGGACCT
FD561471       --> ACGACGAGATCAAAACCTTCGAGTGTATGTCTCATCACGGTTATGGACCT
EX896982       --> ACGACGAGATCAAAACCTTCGAGTGTATGTCTCATCACGGTTATGGACCT
EX896514       --> ACGACGAGATCAAAACCTTCGAGTGTATGTCTCATCACGGTTATGGACCT
FY451551       --> ACGACGAGATCAAAACCTTCGAGTGTATGTCTCATCACGGTTATGGACCT
FY445600       --> ACGACGAGATCAAAACCTTCGAGTGTATGTCTCATCACGGTTATGGACCT
FD971889       --> ACGACGAGATCAAAACCTTCGAGTGTATGTCTCATCATGGTTATGGTCCT
FD568721       --> ACGACGAGATCAAAACCTTCGAGTGTCTGTCTCATCACGGTTATGGACCT
FD540009       --> ..................................................

               601    -    651
UN21258        --> AAGCTTCTTGGCCGCTTCTCCGATGGTCGTCTCGAAGAGTTCATCCACGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD565629       <-- ..................................................
FD565614       <-- ..................................................
EX758588       <-- ..................................................
FD536594       <-- ..................................................
FD948076       --> AAGCTTCTTGGCCGCTTCTCCGATGGTCGTCTCGAAGAGTTCATCCACGC
FY445052       --> AAGCTTCTTGGCCGCTTCTCCGATGGTCGTCTCGAAGAGTTCATCCACGC
FY441530       --> AAGCTTCTTGGCCGCTTCTCCGATGGTCGTCTCGAAGAGTTCATCCACGC
FD561451       --> AAGCTTCTTGGCCGCTTCTCCGATGGTCGTCTCGAAGAGTTCATCCACGC
FD561471       --> AAGCTTCTTGGCCGCTTCTCCGATGGTCGTCTCGAAGAGTTCATCCACGC
EX896982       --> AAGCTTCTTGGCCGCTTCTCCGATGGTCGTCTCGAAGAGTTCATCCACGC
EX896514       --> AAGCTTCTTGGCCGCTTCTCCGATGGTCGTCTCGAAGAGTTCATCCACGC
FY451551       --> AAGCTTCTTGGCCGCTTCTCCGATGGTCGTCTCGAAGAGTTCATCCACGC
FY445600       --> AAGCTTCTTGGCCGCTTCTCCGATGGTCGTCTCGAAGAGTTCATCCACGC
FD971889       --> AAGCTTCTTGGCCGCTTCTCCGATGGTCGTCTCGAAGAGTTCATCCACGC
FD568721       --> AAGCTTCTTGGCCGCTTCTCCGATGGTCGTCTCGAAGAGTTCATCCACAC
FD540009       --> ..................................................

               651    -    701
UN21258        --> AAGAACTCTTTCTGCAGGTGATCTCCGTGTGACCGAAACATCTGATTTAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD565629       <-- ..................................................
FD565614       <-- ..................................................
EX758588       <-- ..................................................
FD536594       <-- ..................................................
FD948076       --> AAGAACTCTTTCTGCAG-TGATCTCCGTGTGACCGAA-CATCTGATTTAA
FY445052       --> AAGAACTCTTTCTGCAGGTGATCTCCGTGTGACCGAAACATCTGATTTAA
FY441530       --> AAGAACTCTTTCTGCAGGTGATCTCCGTGTGACCGAAACATCTGATTTAA
FD561451       --> AAGAACTCTTTCTGCAGGTGATCTCCGTGTGACCGAAACATCTGATTTAA
FD561471       --> AAGAACTCTTTCTGCAGGTGATCTCCGTGTGACCGAAACATCTGATTTAA
EX896982       --> AAGAACTCTTTCTGCAGGTGATCTCCGTGTGACCGAAACATCTGATTTAA
EX896514       --> AAGAACTCTTTCTGCAGGTGATCTCCGTGTGACCGAAACATCTGATTTAA
FY451551       --> AAGAACTCTTTCTGCAGGTGATCTCCGTGTGACCGAAACATCTGATTTAA
FY445600       --> AAGAACTCTTTCTGCAGGTGATCTCCGTGTGACCGAAACATCTGATTTAA
FD971889       --> TAGAACTCTTTCTGCAGGTGATCTCCGTGTACCAGAAACATCTGATTTAA
FD568721       --> AAGAACTCTTTCTGCAGGTGATCTCCGTGTGACCGAAACATCTGATTTAA
FD540009       --> ..................................................

               701    -    751
UN21258        --> TCGCGGCGAAACTAAGAGAGTTTCACAAGCTAGATATGCCTGGTCCAAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD565629       <-- .....................TTCACAAGCTAGATATGCCTG-TCCAAAG
FD565614       <-- ..................................................
EX758588       <-- ..................................................
FD536594       <-- ..................................................
FD948076       --> TCGCGGCGAAACTAAGAGAGTTTCACA-GCTAGATATGCCTGGTCCAAAG
FY445052       --> TCGCGGCGAAACTAAGAGAGTTTCACAAGCTAGATATGCCTGGTCCAAAG
FY441530       --> TCGCGGCGAAACTAAGAGAGTTTCACAAGCTAGATATGCCTGGTCCAAAG
FD561451       --> TCGCGGCGAAACTAAGAGAGTTTCACAAGCTAGATATGCCTGGTCCAAAG
FD561471       --> TCGCGGCGAAACTAAGAGAGTTTCACAAGCTAGATATGCCTGGTCCAAAG
EX896982       --> TCGCGGCGAAACTAAGAGAGTTTCACAAGCTAGATATGCCTGGTCCAAAG
EX896514       --> TCGCGGCGAAACTAAGAGAGTTTCACAAGCTAGATATGCCTGGTCCAAAG
FY451551       --> TCGCGGCGAAACTAAGAGAGTTTCACAAGCTAGATATGCCTGGTCCAAAG
FY445600       --> TCGCGGCGAAACTAAGAGAGTTTCACAAGCTAGATATGCCTGGTCCAAAG
FD971889       --> TCGCGGCGAAACTAAGAGAGTTTCACAAGCTAGACATGCCTGGTCCAAAG
FD568721       --> TCGCGGCGAAACTAAGAGAGTTTCACAAGCTAGATATGCCTGGTCCAAAG
FD540009       --> ..gtGGCGAAACTAAGAGAGTTTCGCAAGCTAGACATGCCTGGTCCAAAG

               751    -    801
UN21258        --> AACGTACTCCTCTGGGAAAGGCTCAGGACTTGGCTCAAGGAAGCTAAGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD565629       <-- AACGTACTCCTCTGGGAAAGGCTCAGGACTTGGCTCAAGGAAGCTAAGAA
FD565614       <-- ..............................................AGAA
EX758588       <-- ..................................................
FD536594       <-- ..................................................
FD948076       --> A-CGTACTC.........................................
FY445052       --> AACGTACTCCTCTGGGAAAGGCTCAGGACTTGGCTCAAGGAAGCTAAGAA
FY441530       --> AACGTACTCCTCTGGGAAAGGCTCAGGACTTGGCTCAAGGAAGCTAAGAA
FD561451       --> AACGTACTCCTCTGGG..................................
FD561471       --> AACGTACTCCTCTGGGAAAGGCTCACGACTTGGCTCAAGGAAGCTAAGAA
EX896982       --> AACGTACTCCTCTGGG..................................
EX896514       --> AACGTACTCCTCTGGGAAAG-CTCAG-ACTTGGCTCAAGGAAGCTAAGAA
FY451551       --> AACGTACTCCTCTGGGAAAGGCTCAGGACTTGGCTCAAGGAAGCTAAGAA
FY445600       --> AACGTACTCCTCTGGGAAAGGCTCAGGACTTGGCTCAAGGAAGCTAAGAA
FD971889       --> AACGTACTCCTCTGGGAAAGGCTCAGGACTTGGCTCAAGGAAGCTAAGAA
FD568721       --> AACGTACTCCTCTGGGAAAGGCTCAGGACTTGGCTCAAGGAAGCTAAGAA
FD540009       --> AACGTACTCCTCTGGGAAAGGCTCAGGACTTGGCTCAAGGAAGCTAAGAA

               801    -    851
UN21258        --> CCTGTGTTCGCCGACAGAGATCGATGAGTTTCGTTTGGAAGCTATGGACG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD565629       <-- CCTGTGTTCGCCGACAGAGATCGATGAGTTTCGTTTGGAAGCTATGGACG
FD565614       <-- CCTGTGTTCGCCGACAGAGATCGATGAGTTTCGTTTGGAAGCTATGGACG
EX758588       <-- .........GCCGACAGAGATCGGTGAGTTTCGTTTGGAAGCTATGGACG
FD536594       <-- ..................................................
FD948076       --> ..................................................
FY445052       --> CCTGTGTTCGCCGACAGAGATCGATGAGTTTCGTTTGGAAGCTATGGACG
FY441530       --> CCTGTGTTCGCCGACAGAGATCGATGAGTTTCGTTTGGAAGCTATGGACG
FD561451       --> ..................................................
FD561471       --> CCTGTGTTCGCCGACAGAGATCGATGAGTTTCGTTTGGAAGCTATGGACG
EX896982       --> ..................................................
EX896514       --> CCTGTGTTCGCCGACAGAGATCGATGAGTTTCGTTTGGA-GCTATGGACG
FY451551       --> CCTGTGTTCGCCGACAGAGATCGATGAGTTTCGTTTGGAAGCTATGGACG
FY445600       --> CCTGTGTTCGCCGACAGAGATCGATGAGTTTCGTTTGGAAGCTATGGACG
FD971889       --> CCTGTGTTCGCCGACAGAGATCGGTGAGTTTCGTTTGGAAGCTATGGACG
FD568721       --> CCTGTGTTCGCCGACAGAGATCGATGAGTTTCGTTTGGAAGCTATGGACG
FD540009       --> CCTGTGTTCGCCGACAGAGATCGGTGAGTTTCGTTTGGAAGCTATGGACG

               851    -    901
UN21258        --> GTGAAATCAACTTGTTGGAAGAGAGGCTGACTCGGGAGGATCAGGAGATT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD565629       <-- GTGAAATCAACTTGTTGAAAGAGAGGCTGACTCGGGAGGATCAGGAGATT  Raphanus sativus var. oleiformis
FD565614       <-- GTGAAATCAACTTGTTGAAAGAGAGGCTGACTCGGGAGGATCAGGAGATT  Raphanus sativus var. oleiformis
EX758588       <-- GTGAAATCAACTTGTTGGATGAGAGGCTGACTCGGGAGGATCAAGAGATT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD536594       <-- ........AACTTGTTGGAAGAGAGGCTGACTCGGGAGGATCAAGAGATT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD948076       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FY445052       --> GTGAAATCAACTTGTTGAAAGAGAGGCTGACTCGGGAGGATCAGGAGATT  Raphanus sativus cv GSK3-1
FY441530       --> GTGAAATCAACTTGTTG.................................  Raphanus sativus cv GSK3-1
FD561451       --> ..................................................  Raphanus sativus var. oleiformis
FD561471       --> -TGAAATCAACTTGTTGAAAGAGAG-CTGACTCGGGAGGATCAG-AGA-T  Raphanus sativus var. oleiformis
EX896982       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EX896514       --> -TGAAATCA-CTTGTTGGAAGAGAG-CTGACTCGGGAG-ATCAG-AGATT  Raphanus sativus cv Early Scarlet Globe
FY451551       --> GTGAAATCAACTTGTTGAAAGAGAGGCTGACTCGGGAGGATCAGGAGATT  Raphanus sativus cv GSK3-1
FY445600       --> GTGAAATCAACTTGTTGAAAGAGAGGCTGACTCGGGAGGATCAGGAGATT  Raphanus sativus cv GSK3-1
FD971889       --> GTGAAATCAACTTGTTGGAAGAGAGGCTGACTCGGGAGGATCAAGAGATT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD568721       --> GTGAAATCAACTTGTTGGAAGAGAGGCTGACTCGGGAGGATCAGGAGATT  Raphanus sativus cv Early Scarlet Globe
FD540009       --> GTGAAATCAACTTGTTGGAAGAGAGGCTGACTCGGGAGGATCAAGAGATT  Raphanus raphanistrum subsp. raphanistrum (MS)

               901    -    951
UN21258        --> GGTTTCTGTCACAATGATCTTCAGTATGGTAACGTCATGATCGATGAGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD565629       <-- GGTTTCTGTCACAATGATCTTCAGTATGGTAACGTCATGATCGATGAGGA  Raphanus sativus var. oleiformis
FD565614       <-- GGTTTCTGTCACAATGATCTTCAGTATGGTAACGTCATGATCGATGAGGA  Raphanus sativus var. oleiformis
EX758588       <-- GGGTTCTGTCACAATGATCTTCAGTATGGTAACGTTATGATCGATGAGGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD536594       <-- GGGTTCTGTCACAATGATCTTCAGTATGGTAACGTTATGATCGATGAGGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD948076       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FY445052       --> GGTTTCTGTCACAATGATCTTCAGTATGGGTACGTCATGAT.........  Raphanus sativus cv GSK3-1
FY441530       --> ..................................................  Raphanus sativus cv GSK3-1
FD561451       --> ..................................................  Raphanus sativus var. oleiformis
FD561471       --> GGTTTCTGTCACAATGAT................................  Raphanus sativus var. oleiformis
EX896982       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EX896514       --> GGTTTCTGTCACA-TGATCTTCAGTATGGTA-CGTCATGATCGATGAG--  Raphanus sativus cv Early Scarlet Globe
FY451551       --> GGTTTCTGTCACAATGATCTTCAGTATGGTAACGTCATGATCGATGAGGA  Raphanus sativus cv GSK3-1
FY445600       --> GGTTTCTGTCACAATGATCTTCAGTATGGTAACGTCATGATCGATGAGGA  Raphanus sativus cv GSK3-1
FD971889       --> GGGTTCTGTCACAATGATCTTCAGTATGGTAACGTTATGATCGA......  Raphanus raphanistrum subsp. raphanistrum (MS)
FD568721       --> GGTTTCTGTCACAATGATCTTCAGTATGGTAACGTCATGATCGATGAGGA  Raphanus sativus cv Early Scarlet Globe
FD540009       --> GGGTTCTGTCACAATGATCTTCAGTATGGTAACGTTATGATCGATGAGGA  Raphanus raphanistrum subsp. raphanistrum (MS)

               951    -   1001
UN21258        --> AACCAACGCTATTACCATCATAGACTATGAGTATTCGAGTTTCAACCCTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD565629       <-- AACCAACGCTATTACCATCATAGACTATGAGTATTCGAGTTTCAACCCTA  Raphanus sativus var. oleiformis
FD565614       <-- AACCAACGCTATTACCATCATAGACTATGAGTATTCGAGTTTCAACCCTA  Raphanus sativus var. oleiformis
EX758588       <-- AACCAACGCTATTACCATCATAGACTATGAGTATTCGAGTTTCAACCCTG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD536594       <-- AACCAACGCTATTACCATCATAGACTATGAGTATTCGAGTTTCAACCCTG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD948076       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FY445052       --> ..................................................  Raphanus sativus cv GSK3-1
FY441530       --> ..................................................  Raphanus sativus cv GSK3-1
FD561451       --> ..................................................  Raphanus sativus var. oleiformis
FD561471       --> ..................................................  Raphanus sativus var. oleiformis
EX896982       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EX896514       --> AAC-AACGCTAT-AC-A-CATAGACTATGAGT..................  Raphanus sativus cv Early Scarlet Globe
FY451551       --> AACCAACGCTATTACCATCATAGACTATGAGTATTCGAGTTT........  Raphanus sativus cv GSK3-1
FY445600       --> AACCAACGCTATTACCATCATAGACTATGAGTATTCGAGTTTCAACCCTA  Raphanus sativus cv GSK3-1
FD971889       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD568721       --> AACCAACGCTATTACCATCATAGACTATGAGTATTCGAGTTTCAACCCTA  Raphanus sativus cv Early Scarlet Globe
FD540009       --> AACCAACGCTATTACCATCATAGACTATGAGTATTCGAGTTTCAACCCTG  Raphanus raphanistrum subsp. raphanistrum (MS)

               1001   -   1051
UN21258        --> TCGCTTATGACATTGCTAACCACTTCTGTGAAATGGCTGCTAATTACCAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD565629       <-- TCGCTTATGACATTGCTAACCACTTCTGTGAAATGGCTGCTAATTACCAT  Raphanus sativus var. oleiformis
FD565614       <-- TCGCTTATGACATTGCTAACCACTTCTGTGAAATGGCTGCTAATTACCAT  Raphanus sativus var. oleiformis
EX758588       <-- TTGCTTATGACATTGCTAACCACTTCTGTGAAATGGCTGCTAATTACCAT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD536594       <-- TTGCTTATGACATTGCTAACCACTTCTGTGAAATGGCTGCTAATTACCAT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD948076       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FY445052       --> ..................................................  Raphanus sativus cv GSK3-1
FY441530       --> ..................................................  Raphanus sativus cv GSK3-1
FD561451       --> ..................................................  Raphanus sativus var. oleiformis
FD561471       --> ..................................................  Raphanus sativus var. oleiformis
EX896982       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EX896514       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FY451551       --> ..................................................  Raphanus sativus cv GSK3-1
FY445600       --> TCGCTTATGACATTGCTAACCACTTCTGTGAAATGGCTGCTA........  Raphanus sativus cv GSK3-1
FD971889       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD568721       --> TCGCTTATGACATTGCTAACCACTTCTGTGAAATGGCTGCTAATTACCAT  Raphanus sativus cv Early Scarlet Globe
FD540009       --> TTGCTTATGACATTGCTAACCACTTCTGTGAAATGGCTGCTAATTACCAT  Raphanus raphanistrum subsp. raphanistrum (MS)

               1051   -   1101
UN21258        --> TCAGACACTCCTCATGTTCTTGATTACACTCTATATCCAGGAGAAGAAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD565629       <-- TCAGACACTCCTCATGTTCTTGATTACACTCTATATCCAGGAGAAGAAGA  Raphanus sativus var. oleiformis
FD565614       <-- TCAGACACTCCTCATGTTCTTGATTACACTCTATATCCAGGAGAAGAAGA  Raphanus sativus var. oleiformis
EX758588       <-- TCAGACACTCCTCATGTTCTGGATTACACTCTATATCCAGGAGAAGAAGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD536594       <-- TCAGACACTCCTCATGTTTTGGATTACACTCTATATCCAGGAGAAGAAGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD948076       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FY445052       --> ..................................................  Raphanus sativus cv GSK3-1
FY441530       --> ..................................................  Raphanus sativus cv GSK3-1
FD561451       --> ..................................................  Raphanus sativus var. oleiformis
FD561471       --> ..................................................  Raphanus sativus var. oleiformis
EX896982       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EX896514       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FY451551       --> ..................................................  Raphanus sativus cv GSK3-1
FY445600       --> ..................................................  Raphanus sativus cv GSK3-1
FD971889       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD568721       --> TCAGACACTCCTCATGTTCTTGATTACACTCTATAT..............  Raphanus sativus cv Early Scarlet Globe
FD540009       --> TCAGACACTCCTCATGTTCTGGATTACACTCTATATCCAGGAGAAGAAGA  Raphanus raphanistrum subsp. raphanistrum (MS)

               1101   -   1151
UN21258        --> ACGGAGAAGGTTCATTAGCACATACCTTGGCTCTACAGGGAATGCACCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD565629       <-- ACGGAGAAGGTTCATTAGCACATACCTTGGCTTTACAGGGAATGCACCAA
FD565614       <-- ACGGAGAAGGTTCATTAGCACATACCTTGGCTCTACAGGGAATGCACCAA
EX758588       <-- ACGGAGAAGGTTCATTAGCACATACCTTGGCTCTACAGGGAATGCACCAA
FD536594       <-- ACGTAGAAGGTTCATTAGCACATACCTTGGCTCTACAGGGAATGCACCAA
FD948076       --> ..................................................
FY445052       --> ..................................................
FY441530       --> ..................................................
FD561451       --> ..................................................
FD561471       --> ..................................................
EX896982       --> ..................................................
EX896514       --> ..................................................
FY451551       --> ..................................................
FY445600       --> ..................................................
FD971889       --> ..................................................
FD568721       --> ..................................................
FD540009       --> ACGTAGAAGGTTCATTAGCACATACCTTGGCTCTACAGGGAATGCACCAA

               1151   -   1201
UN21258        --> GCCAAGAAGAAAAGGATAGGTTAATGACTGATGCAGAGAGATACACTTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD565629       <-- GCCAAGAAGAAGTGGATAGGTTAATGACTGATGCAGAGAGATACACTTTG
FD565614       <-- GCCAAGAAGAAGTGGATAGGTTAATGACTGATGCAGAGAGATACACTTTG
EX758588       <-- GCCAAGAAGAAAAGGATAGGTTAATGACTGATGCAGAGAGATACACTTTG
FD536594       <-- GCCAAGAAGAAAAGGATAGGTTAATGACTGATGCAGAGAGATACACTTTG
FD948076       --> ..................................................
FY445052       --> ..................................................
FY441530       --> ..................................................
FD561451       --> ..................................................
FD561471       --> ..................................................
EX896982       --> ..................................................
EX896514       --> ..................................................
FY451551       --> ..................................................
FY445600       --> ..................................................
FD971889       --> ..................................................
FD568721       --> ..................................................
FD540009       --> GCCAAGAAGAAAAGGATAGGTTAATGACTGATGCAGAGAGATACACTTTG

               1201   -   1251
UN21258        --> GCAAATCATATCTTTTGGGGCTTATGGGGAATCATCTCGGGGCATGTGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD565629       <-- GCAAATCATATCTTTTGGGGCTTATGGGGAATCATCTCGGGGCATGTCAA
FD565614       <-- GCAAATCATATCTTTTGGGGCTTATGGGGAATCATCTCGGGGCATGTCAA
EX758588       <-- GCAAATCATATCTTTTGGGGCTTATGGGGAATCATCTCGGGGCATGTGAA
FD536594       <-- GCAAATCATATCTTTTGGGGCTTATGGGGAATCATCTCGGGGCATGTGAA
FD948076       --> ..................................................
FY445052       --> ..................................................
FY441530       --> ..................................................
FD561451       --> ..................................................
FD561471       --> ..................................................
EX896982       --> ..................................................
EX896514       --> ..................................................
FY451551       --> ..................................................
FY445600       --> ..................................................
FD971889       --> ..................................................
FD568721       --> ..................................................
FD540009       --> GCAAATCATATCTTTTGGGGCTTATGGGGAATCATCTCGGGGCATGTGAA

               1251   -   1301
UN21258        --> CACGATTGAGTTTGATTACAAGGAATATGCAAGGCAGAGATTTGAACAGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD565629       <-- CACGATTGAGTTTGATTACAAGGAATATGCAAGGCAGAGATTTGAACAGT
FD565614       <-- CACGATTGAGTTTGATTACAAGGAATATGCAAGGCAGAGATTTGAACAGT
EX758588       <-- CACGATTGAGTTTGATTACAAGGAATATGCA-GGCAGAGATTTGAACAGT
FD536594       <-- CACGATTGAGTTTGATTACAAGGAATATGCAAGGCAGAGATTTGAACAGT
FD948076       --> ..................................................
FY445052       --> ..................................................
FY441530       --> ..................................................
FD561451       --> ..................................................
FD561471       --> ..................................................
EX896982       --> ..................................................
EX896514       --> ..................................................
FY451551       --> ..................................................
FY445600       --> ..................................................
FD971889       --> ..................................................
FD568721       --> ..................................................
FD540009       --> CACGATTGAGTTTGATTACAAGGAATATGCAAGGCAGAGATTTGAACAGT

               1301   -   1351
UN21258        --> ACTGGCTTAGAAAACAAATGCTCCTAGATTGAGGATGAAGAAGATTCACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD565629       <-- ACTGGCTTAGAAAACAAATGCTCCTAGATTGAGGATGAAGAAGATTCACA
FD565614       <-- ACTGGCTTAGAAAACAAATGCTCCTAGATTGAGGATGAAGAAGATTCACA
EX758588       <-- ACTGGCTTAGAAAACAAATGCTCCTAGATTGAGGATGAAGAAGATTCACA
FD536594       <-- ACTGGCTTAGAAAACAAATGCTCCTAGATTGAGGATGAAGAAGATTCACA
FD948076       --> ..................................................
FY445052       --> ..................................................
FY441530       --> ..................................................
FD561451       --> ..................................................
FD561471       --> ..................................................
EX896982       --> ..................................................
EX896514       --> ..................................................
FY451551       --> ..................................................
FY445600       --> ..................................................
FD971889       --> ..................................................
FD568721       --> ..................................................
FD540009       --> ACTGGCTTAGAAAACAAATGCTCCTAGATTGAGGATGAAGAAGATTCACA

               1351   -   1401
UN21258        --> TTGAAGAAAACTTGAATTTTTAAAAGTTTTTGCAATTAGATAAAAGGAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD565629       <-- TTGAAGAAAACTTGAATTTTTAAAAGTTTCTGCAATTAGATAAAAGGAAA
FD565614       <-- TTGAAGAAAACTTGAATTTTTAAAAGTTTTTGCAATTAGATAAAAGGAAA
EX758588       <-- TTGAAGAAAACTTGAATTTCTAAAAGTTTCTGCAATTAGATAAAAGGAAA
FD536594       <-- TTGAAGAAAACTTGAATTTTTAAAAGTTTTTGCAATTAGATAAAAGGAAA
FD948076       --> ..................................................
FY445052       --> ..................................................
FY441530       --> ..................................................
FD561451       --> ..................................................
FD561471       --> ..................................................
EX896982       --> ..................................................
EX896514       --> ..................................................
FY451551       --> ..................................................
FY445600       --> ..................................................
FD971889       --> ..................................................
FD568721       --> ..................................................
FD540009       --> TTGAAGAAAACTTGAtttcta.............................

               1401   -   1451
UN21258        --> GGAGAATATTTAGGTGAATATTATGCTGTTGTTGTTACTTTCACCAGTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD565629       <-- GGAGAATATTTAGGTGAATATTATGCTATTGTTGTTACTTTCACCAGTTT
FD565614       <-- GGAGAATATTTAGGTGAATATTATGCTATTGTTGTTACTTTCACCAGTTT
EX758588       <-- GGAGAATATTTAGGTGAATATTATGCTGTTGTTGTTACTTTCACCAGTTT
FD536594       <-- GGAGAATATTTAGGTGAATATTATGCTGTTGTTGTTACTTTCACCAGTTT
FD948076       --> ..................................................
FY445052       --> ..................................................
FY441530       --> ..................................................
FD561451       --> ..................................................
FD561471       --> ..................................................
EX896982       --> ..................................................
EX896514       --> ..................................................
FY451551       --> ..................................................
FY445600       --> ..................................................
FD971889       --> ..................................................
FD568721       --> ..................................................
FD540009       --> ..................................................

               1451   -   1501
UN21258        --> GTCTGTTTTCCTCCATTGTATATAGAGGTTTGTAAACTTTCAAAGCAATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD565629       <-- GTCTGTTTTCCTCCATTGTATATAGAGGTTTGTAAACTTTCAAAGCAATG
FD565614       <-- GTCTGTTTTCCTCCATTGTATATAGAGGTTTGTAAACTTTCAAAGCAATG
EX758588       <-- GT................................................
FD536594       <-- GTATGTTTTCCTCCATTGTATATAGAGGTTTGTAAACTTTCAAAGCAATG
FD948076       --> ..................................................
FY445052       --> ..................................................
FY441530       --> ..................................................
FD561451       --> ..................................................
FD561471       --> ..................................................
EX896982       --> ..................................................
EX896514       --> ..................................................
FY451551       --> ..................................................
FY445600       --> ..................................................
FD971889       --> ..................................................
FD568721       --> ..................................................
FD540009       --> ..................................................

               1501   -   1551
UN21258        --> GACATGACTTTTGTTAAATAACG
                   ~~~~~~~~~~~~~~~~~~~~~~~
FD565629       <-- GACA...................
FD565614       <-- GACA...................
EX758588       <-- .......................
FD536594       <-- GACATGACTTTTGTTAAATAACG
FD948076       --> .......................
FY445052       --> .......................
FY441530       --> .......................
FD561451       --> .......................
FD561471       --> .......................
EX896982       --> .......................
EX896514       --> .......................
FY451551       --> .......................
FY445600       --> .......................
FD971889       --> .......................
FD568721       --> .......................
FD540009       --> .......................