RadishBase

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Alignment for radish unigene UN21290

               -2     -     48
UN21290        --> ...GGGATCCTCCCTCTTTCCCATGGCCAAGCCATCCTCCTCTCCTCTCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD985238       <-- ..................................................
EX893913       <-- ..................................................
FD547656       <-- ..................................................
EV571961       <-- ..................................................
EX751062       <-- ..................................................
EY937362       <-- ..................................................
EY926830       <-- ..................................................
EY902964       <-- ..................................................
EX897558       --> ...GGGATCCTCCCTCTTTCCCATGGCCAAGCCATCCTCCTCTCCTCTCC
EY941867       --> ...GGGATCCTCCCTCTTTCCCATGGCCAAGCCATCCTCCTCTCCTCTCC
FD948754       --> ggacGGATCCTCCCTCTTTCCCATGGCCAAGCCATCCTCCTCTCCTCTCC
FD568642       --> ....................ggATGGCCAAGCCATCCTCCTCTCCTCTCC
EX754927       --> ..................................................
FD949382       --> ..................................................

               48     -     98
UN21290        --> CCAAATCCCAATAGAACAAAACTCTCTCCTCTCTCTCTCTCTCTCTCTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD985238       <-- ..................................................
EX893913       <-- ..................................................
FD547656       <-- ..................................................
EV571961       <-- ..................................................
EX751062       <-- ..................................................
EY937362       <-- ..................................................
EY926830       <-- ..................................................
EY902964       <-- ..................................................
EX897558       --> CCAAATCCCAATAGAACAAAACTCTC--CTCTCTCTCTCTCTCTCTCTTC
EY941867       --> CCAAATCCCAATAGAACAAAACTCTC--CTCTCTCTCTCTCTCTCTCTTC
FD948754       --> CCAAATCCCAATAGAACAAAACTCTC--CTCTCTCTCTCTCTCTCTCTTC
FD568642       --> CCAAATCCCAATAGAACAAAACTCTCTCCTCTCTCTCTCTCTCTCTCTTC
EX754927       --> ..................................................
FD949382       --> ..................................................

               98     -    148
UN21290        --> CAATCTTCCTCAGATTCGAAAATGGCTGCAGCAATCGCTTCTCTCTCCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD985238       <-- ..................................................
EX893913       <-- ..................................................
FD547656       <-- ..................................................
EV571961       <-- ..................................................
EX751062       <-- ..................................................
EY937362       <-- ..................................................
EY926830       <-- ..................................................
EY902964       <-- ..................................................
EX897558       --> CAATCTTCCTCAGATTCGAAAATGGCTGCAGCAATCGCTTCTCTCTCCTT
EY941867       --> CAATCTTCCTCAGATTCGAAAATGGCTGCAGCAATCGCTTCTCTCTCCTT
FD948754       --> CAATCTTC..........................................
FD568642       --> CAATCTTCCTCAGATTCGAAAATGGCTGCAGCAATCGCTTCTCTC--CTT
EX754927       --> ..................................................
FD949382       --> ..................................................

               148    -    198
UN21290        --> TCCGGCGCTGAGCCAATCCGCAAAGATCTCCAATTCAACCACGCCTTCTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD985238       <-- ..................................................
EX893913       <-- ..................................................
FD547656       <-- ..................................................
EV571961       <-- ..................................................
EX751062       <-- ..................................................
EY937362       <-- ..................................................
EY926830       <-- ..................................................
EY902964       <-- ..................................................
EX897558       --> TCCGGCGCTGAGCCAATCCGCAAAGATCTCCAATTCAACCACGCCTTCTC
EY941867       --> TCCGGCGCTGAGCCAATCCGCAAAGATCTCCAATTCAACCACGCCTTCTC
FD948754       --> ..................................................
FD568642       --> TCCGGCGCTGAGCCAATCCGCAAAGATCTCCAATTCAACCACGCCTTCTC
EX754927       --> ..................................................
FD949382       --> ..................................................

               198    -    248
UN21290        --> TTCCTCTCGCCTCCGTCTCCGCCATCTCCAGGAGGATTTCTCGCCACCAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD985238       <-- ..................................................
EX893913       <-- ..................................................
FD547656       <-- ..................................................
EV571961       <-- ..................................................
EX751062       <-- ..................................................
EY937362       <-- ..................................................
EY926830       <-- ..................................................
EY902964       <-- ..................................................
EX897558       --> TTCCTCTCGCCTCCGTCTCCGCCATCTCCAGGAGGATTTCTCGCCACCAC
EY941867       --> TTCCTCTCGCCTCCGTCTCCGCCATCTCCAGGAGGATTTCTCGCCACCAC
FD948754       --> ..................................................
FD568642       --> TTCCTCTCGCCTCCTTCTCCGCCATCTCCAGGAGGATTTCTCGCCACCAC
EX754927       --> ..................................................
FD949382       --> ..................................................

               248    -    298
UN21290        --> TCTTTGACTTCTTCTAGAGCTTCCACTTCGAAACTAATCATCCACTGCAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD985238       <-- .................................actATCATCCACTGCAT
EX893913       <-- ..................................................
FD547656       <-- ..................................................
EV571961       <-- ..................................................
EX751062       <-- ..................................................
EY937362       <-- ..................................................
EY926830       <-- ..................................................
EY902964       <-- ..................................................
EX897558       --> TCTTTGACTTCTTCTAGAGCTTCCACTTCGAAACTAATCATCCACTGCAT
EY941867       --> TCTTTGACTTCTTCTAGAGCTTCCACTTCGAAACTAATCATCCACTGCAT
FD948754       --> ..................................................
FD568642       --> TCTTTGACTTCTTCTAGAGCTTCCACTTCGAAACTAATCGTCCACTGCAT
EX754927       --> ..................................................
FD949382       --> ..................................................

               298    -    348
UN21290        --> GTCTAGTGTTACCGATGTGCCACCTGTATCGGAGACAAAGTCAAACTTCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD985238       <-- GTCTAGTGT-ACCGATGTGCCAC-TGTATCGGAGACAAAGTCAAACT-CC
EX893913       <-- ...........................ATCGGAGACAAAGTCAAACTTCC
FD547656       <-- .............................CGGAGACAAAGTCAAACTTC-
EV571961       <-- ..................................................
EX751062       <-- ..................................................
EY937362       <-- ..................................................
EY926830       <-- ..................................................
EY902964       <-- ..................................................
EX897558       --> GTCTAGTGTTACCGATGTGCCACCTGTATCGGAGACAAAGTCAAACTTCC
EY941867       --> GTCTAGTGTTACCGATGTGCCACCTGTATCGGAGACAAAGTCAAACTTCC
FD948754       --> ..................................................
FD568642       --> GTCTAGTGTTACCGATGTGCCACCTGTATCGGAGACAAAGTCAAACTTCC
EX754927       --> ..................................................
FD949382       --> ..................................................

               348    -    398
UN21290        --> TAAAAGCGTACAAGCGACCAATCCCCAGCATCTACAACACCGTCCTCCAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD985238       <-- TAAAAGCGTACAAGCGACCAATCCCCAGCATCTACAACACCGTCCTCCAG
EX893913       <-- TAAAAGCGTACAAGCGACCAATCCCCAGCATCTACAACACCGTCCTCCAG
FD547656       <-- TAAAAGCGTACAAGCGACCAATCCCCAGCATCTACAACACCGTCCTCCAG
EV571961       <-- ............................................CTCCAG
EX751062       <-- ...............................................CAG
EY937362       <-- ..................................................
EY926830       <-- ..................................................
EY902964       <-- ..................................................
EX897558       --> TAAAAGCGTACAAGCGACCAATCCCCAGCATCTACAACACCGTCCTCCAG
EY941867       --> TAAAAGCGTACAAGCGACCAATCCCCAGCATCTACAACACCGTCCTCCAG
FD948754       --> ..................................................
FD568642       --> TAAAAGCGTACAAGCGACCAATCCCCAGCATCTACAACACCGTCCTCCAG
EX754927       --> ..................................................
FD949382       --> ..................................................

               398    -    448
UN21290        --> GAGCTCATCGTACAGCAGCATTTGATGAGGTATAAAAAGACTTACCGTTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD985238       <-- GAGCTCATCGTACAGCAGCATTTGATGAGGTATAAAAAGACTTACCGTTA
EX893913       <-- GAGCTCATCGTACAGCAGCATTTGATGAGGTATAAAAAGACTTACCGTTA
FD547656       <-- GAGCTCATCGTACAGCAGCATTTGATGAGGTATAAAAAGACTTACCGTTA
EV571961       <-- GAGCTCATCGTACAGCAGCATTTGATGAGGTATAAAAAGACTTACCGTTA
EX751062       <-- GAGCTCATCGTACAGCAGCATTTGATGAGGTATAAAAAGACTTACCGTTA
EY937362       <-- ..................................................
EY926830       <-- ..................................................
EY902964       <-- ..................................................
EX897558       --> GAGCTCATCGTACAGCAGCATTTGATGAGGTATAAAAAGACTTACCGTTA
EY941867       --> GAGCTCATCGTACAGCAGCATTTGATGAGGTATAAAAAGACTTACCGTTA
FD948754       --> ..................................................
FD568642       --> AAGCTCATCGTACGGCAGCATTTGATGAGGTATAAAAAGACTTACCGTTA
EX754927       --> ..................................................
FD949382       --> ..................................................

               448    -    498
UN21290        --> CGACCCTGTTTTCGCCCTCGGCTTCGTCACTGTCTACGATCAGCTCATGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD985238       <-- CGACCCTGTTTTCGCCCTCGGCTTCGTCACTGTCTACGATCATCTCATGG
EX893913       <-- CGACCCTGTTTTCGCCCTCGGCTTCGTCACTGTCCACGATCAGCTCATGG
FD547656       <-- CGACCCTGTTTTCGCCCTCGGCTTCGTCACTGTCTACGATCAGCTCATGG
EV571961       <-- CGACCCTGTTTTCGCCCTCGGCTTCGTCACTGTCTACGATCAGCTCATGG
EX751062       <-- CGACCCTGTTTTCGCCCTCGGCTTCGTCACTGTCTACGATCAGCTCATGG
EY937362       <-- ....................GCTTCGTCACTGTCTACGATCAGCTCATGG
EY926830       <-- ............................ACTGTCTACGATCAGCTCATGG
EY902964       <-- ..................................................
EX897558       --> CGACCCTGTTTTCGCCCTCGGCTTCGTCACTGTCTACGATCAGCTCATGG
EY941867       --> CGACCCTGTTTTCGCCCTCGGCTTCGTCACTGTCTACGATCAGCTCATGG
FD948754       --> ..................................................
FD568642       --> CGACCCTGTTTTCGCCCTCGGCTTCGTCACTGTCTACGATCAGCTCATGG
EX754927       --> ...gCCTGTTTTCGCCCTCGGCTTCGTCACCGTCTACGATCAGCTCATGG
FD949382       --> ..................................................

               498    -    548
UN21290        --> ATGGCTATCCCAGCGATCAGGATCGTGATTCCATTTTTCAAGCCTACGTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD985238       <-- ATGGCTATCCCAGCGATCAGGATCGTGATTCCATTTTTCAAGCCTACGTC
EX893913       <-- ATGGCTATCCCAGCGATCAGGATCGTGATTCCATTTTTCAAGCCTACGTC
FD547656       <-- ATGGTTATCCCAGCGATCAGGATCGTGATTCCATTTTTCAAGCCTACGTC
EV571961       <-- ATGGCTATCCCAGCGATCAGGATCGTGATTCCATTTTTCAAGCCTACGTC
EX751062       <-- ATGGCTATCCCAGCGATCAGGATCGTGATTCCATTTTTCAAGCCTACGTC
EY937362       <-- ATGGCTATCCCAGCGATCAGGATCGTGATTCCATTTTTCAAGCCTACGTC
EY926830       <-- ATGGCTATCCCAGCGATCAGGATCGTGATTCCATTTTTCAAGCCTACGTC
EY902964       <-- ..................................................
EX897558       --> ATGGCTATCCCAGCGATCAGGATCGTGATTCCATTTTTCAAGCCTACGTC
EY941867       --> ATGGCTATCCCAGCGATCAGGATCGTGATTCCATTTTTCAAGCCTACGTC
FD948754       --> ..................................................
FD568642       --> ATGGCTATCCCAGCGATCAGGATCGTGATTCCATTTTTCAAGCCTACGTC
EX754927       --> ATGGATATCCCAGCGATCAGGATCGTGATTCCATTTTTCAAGCCTACGTC
FD949382       --> ..............................................gGTC

               548    -    598
UN21290        --> CAAGCTTTGAATGAGGATCCTAACCAATACCGAGCTGATGCGCAGAAGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD985238       <-- CAAGCTTTGAATGAGGATCCTAACCAATACCGAACTGATGCGCAGAAGAT  Raphanus raphanistrum subsp. landra
EX893913       <-- CAAGCTTTGAATGAGGATCCTAACCAATACCGAGCTGATGCGCAGAAGAT  Raphanus sativus var. oleiformis
FD547656       <-- CAAGCTTTGAATGAGGATCCTAACCAATACCGAACTGATGCGCAGAAGAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EV571961       <-- CAAGCTTTGAATGAGGATCCTAACCAATACCGAACTGATGCGCAGAAGAT  Raphanus raphanistrum subsp. landra
EX751062       <-- CAAGCTTTGAATGAGGATCCTAACCAATACCGAACTGATGCGCAGAAGAT  Raphanus raphanistrum subsp. maritimus
EY937362       <-- CAAGCTTTGAATGAGGATCCTAACCAATACCGAGCTGATGCGCAGAAGAT  Raphanus sativus cv Early Scarlet Globe
EY926830       <-- CAAGCTTTGAATGAGGATCCTAACCAATACCGAGCTGATGCGCAGAAGAT  Raphanus sativus var. oleiformis
EY902964       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX897558       --> CAAGCTTTGAATGAGGATCCTAACCAATACCGAGCTGATGCGCAGAAGAT  Raphanus sativus cv Early Scarlet Globe
EY941867       --> CAAGCTTTGAATGAGGATCCTAACCAATACCGAGCTGATGCGCAGAAGAT  Raphanus sativus cv Early Scarlet Globe
FD948754       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD568642       --> CAAGCTTTGAATGAGGATCCTAACCAATACCGAGCTGATGCGCAGAAGAT  Raphanus sativus cv Early Scarlet Globe
EX754927       --> CAAGCTTTGAATGAGGATCCTAACCAATACCGAACTGATGCGCAGAAGAT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD949382       --> CAAGCTTTGAATGAGGATCCTAACCAATACCGAGCTGATGCGCAGAAGAT  Raphanus sativus cv Early Scarlet Globe

               598    -    648
UN21290        --> GGAGGAATGGGCGCGAAGTCAGACTTCTGCTTCACTAGTTGACTTCTCGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD985238       <-- GGAGGAATGGGCGCGAAGTCAGACTTCTGCTTCACTAGTTGACTTCTCGT
EX893913       <-- GGAGGAATGGGCGCGAAGTCAGACTTCTGCTTCACCAGTTGACTTCTCGT
FD547656       <-- GGAGGAATGGGCGCGAAGTCAGACTTCTGCTTCACTAGTTGACTTCTCGT
EV571961       <-- GGAGGAATGGGCGCGAAGTCAGACTTCTGCTTCACTAGTTGACTTCTCGT
EX751062       <-- GGAGGAATGGGCGCGAAGTCAGACTTCTGCTTCACTGGTTGACTTCTCGT
EY937362       <-- GGAGGAATGGGCGCGAAGTCAGACTTCTGCTTCACTAGTTGACTTCTCGT
EY926830       <-- GGAGGAATAGGCGCGAAGTCAGACTTCTGCTTCACTAGTTGACTTCTCGT
EY902964       <-- ..................................................
EX897558       --> GGAGGAATGGGCGCGAAGTCAGACTTCTGCTTCACTGGTTGACTTCTCGT
EY941867       --> GGAGGAATGGGCGCGAAGTCAGACTTCTGCTTCACTAGTTGACTTCTCGT
FD948754       --> ..................................................
FD568642       --> GGAGGAATGGGCGCGAAGTCAGACTTCTGCTTCACTAGTTGACTTCTCGT
EX754927       --> GGAGGAATGGGCGCGAAGTCAGACTTCTGCTTCACTAGTTGACTTCTCGT
FD949382       --> GGAGGAATGGGCGCGAAGTCAGACTTCTGCTTCACTAGTTGACTTCTCGT

               648    -    698
UN21290        --> CTAAGGAGGGAGAAGTCGAAGCGATTCTTAAGGACATTTCAGAAAGAGCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD985238       <-- CTAAGGAGGGAGAAGTCGAAACGATTCTTAAGGACATTTCAGAAAGAGCT
EX893913       <-- CTAAGGACGGAGAAGTCGAAGCGATTCTTAAGGACATTTCAGAAAGAGCT
FD547656       <-- CTAAGGAGGGAGAAGTTGAAGCGATTCTTAAGGACATTTCAGAAAGAGCT
EV571961       <-- CTAAGGAGGGAGAAGTCGAAGCGATTCTTAAGGACATTTCAGAAAGAGCT
EX751062       <-- CTAAGGAGGGAGAAGTTGAAGCGATTCTTAAGGACATTTCAGAAAGAGCT
EY937362       <-- CTAAGGAGGGAGAAGTCGAAGCGATTCTTAAGGACATTTCAGAAAGAGCT
EY926830       <-- CTAAGGACGGAGAAGTCGAAGCGATTCTTAAGGACATTTCAGAAAGAGCT
EY902964       <-- ..................................................
EX897558       --> CTAAG-AGGGAGAAGTCGAAGCGAT.........................
EY941867       --> CTAAG-AGGGAGAAGTCGAAGCGATTCTTAAG-ACATTTCAGAAAGAGCT
FD948754       --> ..................................................
FD568642       --> CTAAG-AGGGAGAAGTCGAAGCGATTCTTAAG-ACATTTCAGAAAGAGCT
EX754927       --> CTAAGGAGGGAGAAGTTGAAGCGATTCTTAAGGACATTTCAGAAAGAGCT
FD949382       --> CTAAGGAGGGAGAAGTCGAAGCGATTCTTAAGGACATTTCAGAAAGAGCT

               698    -    748
UN21290        --> GGCAGTAAGGAAGGTTTCAGTTACAGCAGGTTCTTCGCTGTTGGCTTGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD985238       <-- GGCAGTAAGGAAGGTTTCAGTTACAGCAGGTTCTTCGCTGTTGGCTTGTT  Raphanus raphanistrum subsp. landra
EX893913       <-- GGCAGTAAGGAAGGTTTCAGTTACAGCAGGTTCTTCGCTGTTGGCTTGTT  Raphanus sativus var. oleiformis
FD547656       <-- GGGAGTAAGGAGGGTTTCAGTTACAGCAGGTTCTTCGCTGTTGGCTTGTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EV571961       <-- GGCAGTAAGGAAGGTTTCAGTTACAGCAGGTTCTTCGCTGTTGGCTTGTT  Raphanus raphanistrum subsp. landra
EX751062       <-- GGCAGTAAGGAAGGTTTCAGTTACAGCAGGTTCTTCGCTGTTGGCTTGTT  Raphanus raphanistrum subsp. maritimus
EY937362       <-- GGGAGTAAGGAGGGTTTCGGTTACAGCAGGTTTTTCGCTGTTGGCTTGTT  Raphanus sativus cv Early Scarlet Globe
EY926830       <-- GGCAGTAAGGAAGGTTTCAGTTACAGCAGGTTCTTCGCTGTTGGCTTGTT  Raphanus sativus var. oleiformis
EY902964       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX897558       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EY941867       --> GGGAGTA...........................................  Raphanus sativus cv Early Scarlet Globe
FD948754       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD568642       --> GGGAGTAA..........................................  Raphanus sativus cv Early Scarlet Globe
EX754927       --> GGCAGTAAGGAGGGTTTCAGTTACAGCAGGTTCTTCGCTGTTGGTTTGTT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD949382       --> GGGAGTAAGGAGGGTTTCAGTTACAGCAGGTTCTTCGCTGTTGGCTTGTT  Raphanus sativus cv Early Scarlet Globe

               748    -    798
UN21290        --> TCGCTTGCTTGAGCTTGCAGGTGCTACTGATCCCACCGTCCTTGACAAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD985238       <-- TCGCTTGCTTGAGCTTGCAGGTGCTACTGATCCCACCGTCCTTGACAAGC
EX893913       <-- TCGCTTGCTTGAGCTTGCAGGTGCTACTGATCCCACCGTCCTTGACAAGC
FD547656       <-- TCGCTTGCTTGAGCTTGCAGGTGCTACTGATCCCACCGTCCTTGACAAGC
EV571961       <-- TCGCTTGCTTGAGCTTGCAGGTGCTACTGATCCCACCGTCCTTGACAAGC
EX751062       <-- TCGCTTGCTTGAGCTTGCAGGTGCTACTGATCCCACCGTCCTTGACAAGC
EY937362       <-- TCGCTTGCTTGAGCTTGCAGGTGCTACTGATCCCACCGTCCTTGACAAGC
EY926830       <-- TCGCTTGCTTGAGCTTGCAGGTGCTACTGATCCCACCGTCCTTGACAAGC
EY902964       <-- ..................................................
EX897558       --> ..................................................
EY941867       --> ..................................................
FD948754       --> ..................................................
FD568642       --> ..................................................
EX754927       --> TCGCTTGCTTGAGCTTGCAGGTGCTGCTGATCCCACCGTCCTTGACAAGC
FD949382       --> TCGCTTGCTTGAGCTTGCAGGTGCTACTGATCCCACCGTCCTTGACAAGC

               798    -    848
UN21290        --> TTTGTGCGTCCCTAAATATCAACAAGAAAAGCGTGGATCGGGACCTCGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD985238       <-- TTTGTGCGCCCCTAAATATCAACAAGAAAAGCGTGGATCGGGACCTCGAT  Raphanus raphanistrum subsp. landra
EX893913       <-- TTTGTGCGTCCCTAAATATCAACAAGAAAAGCGTGGATCGGGACCTCGAT  Raphanus sativus var. oleiformis
FD547656       <-- TTTGTGCATCCCTAAATATCAACAAGAAAAGCGTGGATCGGGACCTCGAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EV571961       <-- TTTGTGCGTCCCTAAATATCAACAAGAAAAGCGTGGATCGGGACCTCGAT  Raphanus raphanistrum subsp. landra
EX751062       <-- TTTGTGCGTCCCTAAATATCAACAAGAAAAGCGTGGATCGGGACCTCGAT  Raphanus raphanistrum subsp. maritimus
EY937362       <-- TTTGTGCATCCCTAAATATCAACAAGAAAAGCGTGGATCGGGACCTCGAT  Raphanus sativus cv Early Scarlet Globe
EY926830       <-- TTTGTGCGTCCCTAAATATCAACAAGAAAAGCGTGGATCGGGACCTCGAT  Raphanus sativus var. oleiformis
EY902964       <-- ........TCCCTAAATATCAACAAGAAAAGCGTGGATCGGGACCTCGAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX897558       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EY941867       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD948754       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD568642       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EX754927       --> TTTGTGCATCCCTAAATATCAACAAGAAAAGCGTGGATCGGGACCTCGAT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD949382       --> TTTGTGCATCCCTAAATATCAACAAGAAAAGTGTGGATCGGGACCTCGAT  Raphanus sativus cv Early Scarlet Globe

               848    -    898
UN21290        --> GTGTATCGCAACCTGCTTTCAAAGCTTGTCCAAGCCAAGGAACTACTCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD985238       <-- GTGTATCGCAACCTGCTTTCAAAGCTTGTCCAAGCCAAGGAACTACTCAA
EX893913       <-- GTGTATCGCAACCTGCTTTCAAAGCTTGTCCAAGCCAAGGAACTACTCAA
FD547656       <-- GTGTATCGCAACCTGCTTTCGAAGCTTGTCCAAGCCAAGGAACTACTCAA
EV571961       <-- GTGTATCGCAACCTGCTTTCAAAGCTTGTCCAAGCCAAGGAACTACTCAA
EX751062       <-- GTGTATCGCAACCTGCTTTCGAAGCTTGTCCAAGCCAAGGAACTACTCAA
EY937362       <-- GTGTATCGCAACCTGCTTTCAAAGCTTGTCCAAGCCAAGGAACTACTCAA
EY926830       <-- GTGTATCGCAACCTGCTTTCAAAGCTTGTCCAAGCCAAGGAACTACTCAA
EY902964       <-- GTGTATCGCAACCTGCTTTCAAAGCTTGTCCAAGCCAAGGAACTACTCAA
EX897558       --> ..................................................
EY941867       --> ..................................................
FD948754       --> ..................................................
FD568642       --> ..................................................
EX754927       --> GTGTATCGCAACCTGCTTTCAAAGCTTGTCCAAGCCAAGGAATTACTCAA
FD949382       --> GTGTATCGCAACCTGCTTTCAAAGCTTGTCCAAGCCAAGGAACTACTCAA

               898    -    948
UN21290        --> GGAGTATGTCGAGAGGGAGAAGAAGAAGCGAGGGGAAAGAGCCAGCCGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD985238       <-- GGAGTATGTCGAGAGGGAGAAGAAGAAGCGAGGGGAAAGAGC-AGCCGAA  Raphanus raphanistrum subsp. landra
EX893913       <-- GGAGTATGTCGAGAGGGAGAAGAAGAAGCGAGGGGAAAGA----GCCGAA  Raphanus sativus var. oleiformis
FD547656       <-- GGAGTATGTCGAGAGGGAGAAGAAGAAGCGAGGGGAAAGA----GCCGAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV571961       <-- GGAGTATGTCGAGAGGGAGAAGAAGAAGCGAGGGGAAAGAGC-AGCCGAA  Raphanus raphanistrum subsp. landra
EX751062       <-- GGAGTATGTCGAGAGGGAGAAGAAGAAGCGAGGGGAAAGAGC-AGCCGAA  Raphanus raphanistrum subsp. maritimus
EY937362       <-- GGAGTATGTCGAGAGGGAGAAGAAGAAGCGAGGGGAAAGA----GCCGAA  Raphanus sativus cv Early Scarlet Globe
EY926830       <-- GGAGTATGTCGAGAGGGAGAAGAAGAAGCGAGGGGAAAGA----GCCGAA  Raphanus sativus var. oleiformis
EY902964       <-- GGAGTATGTCGAGAGGGAGAAGAAGAAGCGAGGGGAAAGAGC-AGCCGAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX897558       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EY941867       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD948754       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD568642       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EX754927       --> GGAGTATGTCGAGAGGGAGAAGAAGAAGCGAGGGGAAAGAGC-AGCCGAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD949382       --> GGAGTATGTCGAGAGGGAGAAGAAGAAGCGAGGGGAAAGAGCC----GAA  Raphanus sativus cv Early Scarlet Globe

               948    -    998
UN21290        --> TCCCAGAAAGCTAACGAATCAATCTCCAAGTCTCTGGGAGATAATAGCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD985238       <-- TCCCAGAAAGCTAACGAATCAATCTCCAAGTCTCTGGGAGATAATACCTT  Raphanus raphanistrum subsp. landra
EX893913       <-- TCCCAGAAAGCTAACGAATCAATCTCCAAGTCTCTTGGAGATAATATCTT  Raphanus sativus var. oleiformis
FD547656       <-- TCCCAGAAAGCTAACGAATCAATCTCCAAGTCTCTGGGAGATAATAGCTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EV571961       <-- TCCCAGAAAGCTAACGAATCAATCTCCAAGTCTCTGGGAGATAATACCTT  Raphanus raphanistrum subsp. landra
EX751062       <-- TCCCAGAAAGCTAACGAATCAATCTCCAAGTCTCTGGGAGATAATACCTT  Raphanus raphanistrum subsp. maritimus
EY937362       <-- TCCCAGAAAGCTAACGAATCCATCTCCAAGTCTCTGGGAGATAATAGCTT  Raphanus sativus cv Early Scarlet Globe
EY926830       <-- TCCCAGAAAGCTAACGAATCAATCTCCAAGTCTCTTGGAGATAATAGCTT  Raphanus sativus var. oleiformis
EY902964       <-- TCCCAGAAAGCTAACGAATCAA............................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX897558       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EY941867       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD948754       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD568642       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EX754927       --> TCCCAGAAAGCTAACGAATCAATCTCCAAGTCTCTGGGAGATAATAGCTT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD949382       --> TCCCAGAAAGCTAACGAATCCATCTCCAAGTCTCTGGGAGATAATAGCTT  Raphanus sativus cv Early Scarlet Globe

               998    -   1048
UN21290        --> ATCTTTCTTGGTTTAATGGATATCATAAACAATCAATTTGTGAATTTTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD985238       <-- ATCTTTCTTGGTTTAATGGATATCATAAACAATCAATTTGTGAATTTTTG  Raphanus raphanistrum subsp. landra
EX893913       <-- ATCTTTCTTGGTTTAATGGATATCATAAACAA..................  Raphanus sativus var. oleiformis
FD547656       <-- ATCTTTCTTGGTTTAATGGATATTATAAACGATCAATTTGTGAATTTTTG  Raphanus raphanistrum subsp. raphanistrum (NY)
EV571961       <-- ATCTTTCTTGGTTTAATGGATATCATAAACAATCAATTTGTGAATTTTTG  Raphanus raphanistrum subsp. landra
EX751062       <-- ATCTTTCTTGGTTTAATGGATATCATAAACAATCAATTTGTGAATTTTTG  Raphanus raphanistrum subsp. maritimus
EY937362       <-- ATCTTTCTTGGTTTAATGGATATCATAAACAATCAATTTGTGAATT----  Raphanus sativus cv Early Scarlet Globe
EY926830       <-- ATCTTTCTTGGTTTAATGGATATCATAAACAATCAATTTGTGAATTT---  Raphanus sativus var. oleiformis
EY902964       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX897558       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EY941867       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD948754       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD568642       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EX754927       --> ATCTTTCTTGGTTTAATGGATATCATAAACAATCAATTTGTGA.......  Raphanus raphanistrum subsp. raphanistrum (MS)
FD949382       --> ATCTTTCTTGGTTTAATGGATATCATAAACAATCAATTTGTGAATTTTT-  Raphanus sativus cv Early Scarlet Globe

               1048   -   1098
UN21290        --> TTTTTGTTTTTTGTTTATTGTTCTTAGTAACAACTGCAACTACTTGACCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD985238       <-- TTTTTGTTTTTTGTTTATTGTTCTTAGTAACAACTGCAACTACTTGACCT  Raphanus raphanistrum subsp. landra
EX893913       <-- ..................................................  Raphanus sativus var. oleiformis
FD547656       <-- TTTTTGTTTTTTGTTTATTGTTCTTAGTAACAACTGCAACTACTTGACCc  Raphanus raphanistrum subsp. raphanistrum (NY)
EV571961       <-- TTTTTGTTTTTTGTTTATTGTTCTTAGTAACAACTACAACTACTTGACCT  Raphanus raphanistrum subsp. landra
EX751062       <-- TTTTTGTTTTTTGTTTATTGTTCTTAGTAACAACTGCAACTACTTGACCT  Raphanus raphanistrum subsp. maritimus
EY937362       <-- TTTTTGTTT--TGTT-ATTGTTCTTAGTAACAACTGCAACTACTTGACCT  Raphanus sativus cv Early Scarlet Globe
EY926830       <-- TTTTTGTTT--TGTT-ATTGTTCTTAGTAACAACTGCAACTACTTGACCT  Raphanus sativus var. oleiformis
EY902964       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX897558       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EY941867       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD948754       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD568642       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EX754927       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD949382       --> ---TTGTTTT--GTT-ATTGTTCTTAGTAACAACTGCAACTACTTGACCT  Raphanus sativus cv Early Scarlet Globe

               1098   -   1148
UN21290        --> AAGACATACGTGTGCTCA-CATTCCTAAGAACAAATATATCTCTTTCGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD985238       <-- g.................................................
EX893913       <-- ..................................................
FD547656       <-- t.................................................
EV571961       <-- AAGACATACGTGTGC-C--CATTCCTAAGAACAAATATATCTCTTTCGAT
EX751062       <-- AAGACATACGTGTGCTC---ATTCCTAAGAACAAATATATCTCTTTCGAT
EY937362       <-- AAGACATACGTGTGCTCA-CATTCCTAAGAACAAATATATCTCTTTCGAT
EY926830       <-- AAGACATACGTGTGCTCATCATTCCTAAGAACAAATATATCCCTTTCGAT
EY902964       <-- ..................................................
EX897558       --> ..................................................
EY941867       --> ..................................................
FD948754       --> ..................................................
FD568642       --> ..................................................
EX754927       --> ..................................................
FD949382       --> AAGACATACGTGTGCTCA-CATTCCTAAGAACAAATATATCTCTTTCGAT

               1148   -   1198
UN21290        --> TTTATGAGTTTTTACACG
                   ~~~~~~~~~~~~~~~~~~
FD985238       <-- ..................
EX893913       <-- ..................
FD547656       <-- ..................
EV571961       <-- c.................
EX751062       <-- TTTATGAGc.........
EY937362       <-- TTTATGAGTTTTTACACG
EY926830       <-- Tc................
EY902964       <-- ..................
EX897558       --> ..................
EY941867       --> ..................
FD948754       --> ..................
FD568642       --> ..................
EX754927       --> ..................
FD949382       --> TTTATGAGTTTac.....