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Alignment for radish unigene UN21312

               1      -     51
UN21312        --> GGGCAAACACACAGACACAGAAGGTAAAGCAAAAATGGTGTCGGGATCAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV543960       <-- ..................................................
EY928866       <-- ..................................................
EY935463       <-- ..................................................
EW728435       <-- ..................................................
EY939553       --> GGGCAAACACACAGACACAGAAGGTAAAGCAAAAATGGTGTCGGGATCAG
EY932055       --> ..ggAAACACACAGACACAGAAGGTAAAGCAAAAATGGTGTCGGGATCAG
EY933380       --> ..............ACACAGAAGGTAAAGCAAAAATGGTGTCGGGATCAG
EY914027       --> .......ggacacacaACAGAAGGTGAAGCAAAAATGGTGTCGGGATCCG
EV548251       --> ..................................................
EW723789       --> ..................................................

               51     -    101
UN21312        --> GTATATGCTCGAAGCGCGTGGTCGTCGACGCGCGCCACCACATGCTGGGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV543960       <-- .............................................gGGGG
EY928866       <-- ..............................................GGGG
EY935463       <-- ..................................................
EW728435       <-- ..................................................
EY939553       --> GTATATGCTCGAAGCGCGTGGTCGTCGACGCGCGCCACCACATGCTGGGG
EY932055       --> GTATATGCTCGAAGCGCGTGGTCGTCGACGCGCGCCACCACATGCTGGGG
EY933380       --> GTATATGCTCGAAGCGCGTGGTCGTCGACGCGCGCCACCACATGCTGGGG
EY914027       --> GTATATGCTCGAAGCGCGTGGTCGTCGACGCGCGCCACCACATGCTGGGA
EV548251       --> .............................................gGGGG
EW723789       --> ..................................................

               101    -    151
UN21312        --> CGTCTGGCGTCGATCGTGGCCAAGGAGCTGCTCAACGGGCAGAAGGTCGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV543960       <-- CGTCTGGCGTCGATCGTGGCCAAGGAGCTGCTCAACGGGCAGAAGGTCGT
EY928866       <-- CGTCTGGCGTCGATCGTGGCCAAGGAGCTGCTCAACGGGCAGAAGGTCGT
EY935463       <-- ...................................CGGGCAGAAGGTCGT
EW728435       <-- ..................................................
EY939553       --> CGTCTGGCGTCGATCGTGGCCAAGGAGCTGCTCAACGGGCAGAAGGTCGT
EY932055       --> CGTCTGGCGTCGATCGTGGCCAAGGAGCTGCTCAACGGGCAGAAGGTCGT
EY933380       --> CGTCTGGCGTCGATCGTGGCCAAGGAGCTGCTCAACGGGCAGAAGGTCGT
EY914027       --> CGTCTGGCGTCGATCGTGGCCAAGTAGCTGCTCAACGGGCAGAAGGTCGT
EV548251       --> CGTCTGGCGTCGATCGTGGCCAAGGAGCTGCTCAACGGGCAGAAGGTCGT
EW723789       --> ..................................................

               151    -    201
UN21312        --> CATCGTTAGATGCGAGGAGATTTGCCTCTCCGGTGGACTCGTTCGCCAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV543960       <-- CATCGTTAGATGCGAGGAGATTTGCCTCTCCGGTGGACTCGTTCGCCAGA
EY928866       <-- CATCGTTAGATGCGAGGAGATTTGCCTCTCCGGTGGACTCGTTCGCCAGA
EY935463       <-- CATCGTTAGATGCGAGAAGATTTGCCTCTCCGGTGGACTCTTTCGCCAGA
EW728435       <-- ..................................................
EY939553       --> CATCGTTAGATGCGAGAAG-TTTGCCTCTCCGGTGGACTCTTTCGCCAGA
EY932055       --> CATCGTTAGATGCGAGGAGATTTGCCTCTCCGGTGGACTCGTTCGCCAGA
EY933380       --> CATCGTTAGATGCGAGGAGATTTGCCTCTCCGGTGGACTCGTTCGCCAGA
EY914027       --> CATCGTTAGATGCGAGGAGATTTGCCTCTCCGGTGGACTCGTTCGCCAGA
EV548251       --> CATCGTTAGATGCGAGGAGATTTGCCTCTCCGGTGGACTCGTTCGCCAGA
EW723789       --> ..................................................

               201    -    251
UN21312        --> AAATGAAGTACATGAGGTTCCTTCGCAAACGTATGAACACGAAGCCTTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV543960       <-- AAATGAAGTACATGAGGTTCCTTCGCAAACGTATGAACACGAAGCCTTCT
EY928866       <-- AAATGAAGTACATGAGGTTCCTTCGCAAACGTATGAACACGAAGCCTTCT
EY935463       <-- AAATGAAGTACATGAGGTTCCTTCGCAAACGTATGAACACGAAGCCTTCT
EW728435       <-- ..................................................
EY939553       --> AAATGAAGTACATGAGGT-CCTTCGCAAACG-ATGAACACGAAGCCTTCT
EY932055       --> AAATGAAGTACATGAGGTTCCTTCGCAAACGTATGAACACGAAGCCTTCT
EY933380       --> AAATGAAGTACATGAGGTTCCTTCGCAAACGTATGAACACGAAGCCTTCT
EY914027       --> AAATGAAGTACATGAGGTTCCTTCGCAAACGTATGAACACGAAGCCTTCT
EV548251       --> AAATGAAGTACATGAGGTTCCTTCGCAAACGTATGAACACGAAGCCTTCT
EW723789       --> ..................................................

               251    -    301
UN21312        --> CACGGACCCATTCACTTCCGTGCTCCCTCCAAGATCTTCTGGCGTACTGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV543960       <-- CACGGACCCATTCACTTCCGTGCTCCTTCAAAGATCTTCTGGCGTACTGT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY928866       <-- CACGGACCCATTCACTTCCGTGCTCCCTCCAAGATCTTCTGGCGTACTGT  Raphanus sativus var. oleiformis
EY935463       <-- CACGGACCCATTCACTTCCGTGCTCCCTCCAAGATCTTCTGGCGTACTGT  Raphanus sativus cv Early Scarlet Globe
EW728435       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY939553       --> CACGGA............................................  Raphanus sativus cv Early Scarlet Globe
EY932055       --> CACGGACCCATTCACTTCCGTGCTCCCTCCAAGATCTTCTGGCGTACTGT  Raphanus sativus var. oleiformis
EY933380       --> CACGGACCCATTCACTTCCGTGCTCCCTCCAAGATCTTCTGGCGTACTGT  Raphanus sativus var. oleiformis
EY914027       --> CACGGACCCATTCACTTCCGTGCTCCTTCAAAGATCTTCTGGCGTACTGT  Raphanus raphanistrum subsp. raphanistrum (NY)
EV548251       --> CACGGACCCATTCACTTCCGTGCTCCTTCAAAGATCTTCTGGCGTACTGT  Raphanus raphanistrum subsp. raphanistrum (NY)
EW723789       --> ..................................................  Raphanus sativus cv Early Scarlet Globe

               301    -    351
UN21312        --> TCGCGGTATGATTCCACACAAGACGAAGCGTGGATCTGCTGCACTTGCCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV543960       <-- TCGCGGTATGATTCCACACAAGACGAAGCGTGGAGCTGCTGCACTTGCCC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY928866       <-- TCGCGGTATGATTCCACACAAAACGAAGCGTGGATCTGCTGCACTTGCAC  Raphanus sativus var. oleiformis
EY935463       <-- TCGCGGTATGATTCCACACAAAACGAAGCGTGGATCTGCTGCACTTGCAC  Raphanus sativus cv Early Scarlet Globe
EW728435       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY939553       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EY932055       --> TCGCGGTATGATTCCACACAAAACGAAGCGTGGATCTGCTGCACTTGCAC  Raphanus sativus var. oleiformis
EY933380       --> TCGCGGTATGATTCCACACAAa............................  Raphanus sativus var. oleiformis
EY914027       --> TCGCGGTATTATTCCACACAAGACGAAGCGTGGAGCTGCTGCACTTGCCC  Raphanus raphanistrum subsp. raphanistrum (NY)
EV548251       --> TCGCGGTATGATTCCACACAAGACGAAGCGTGGAGCTGCTGCACTTGCCC  Raphanus raphanistrum subsp. raphanistrum (NY)
EW723789       --> ..................................................  Raphanus sativus cv Early Scarlet Globe

               351    -    401
UN21312        --> GCATGAAGGTGTTTGAAGGTGTGCCTCCACCGTATGACAAGGTCAAGAGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV543960       <-- GCATGAAGGTGTTTGAAGGTGTGCCTCCACCGTATGACAAGGTCAAGAGG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY928866       <-- GCATGAAGGTGTTTGAAGGTGTGCCTCAACCATATGACAAGGTCAAGAGG  Raphanus sativus var. oleiformis
EY935463       <-- GCATGAAGGTGTTTGAAGGTGTGCCTCCACCATATGACAAGGTCAAGAGG  Raphanus sativus cv Early Scarlet Globe
EW728435       <-- .......................................gGGTCAAGAGG  Raphanus sativus cv Early Scarlet Globe
EY939553       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EY932055       --> GCATGAAGGTGTTTGAAGGTGTGCCTCCACCATATGACAAGGTCAAGAGG  Raphanus sativus var. oleiformis
EY933380       --> ..................................................  Raphanus sativus var. oleiformis
EY914027       --> GAATGAAGGTGTTTGAAGGTGTGCCTCCACCGTATGACAAGGTCAAGAGG  Raphanus raphanistrum subsp. raphanistrum (NY)
EV548251       --> GCATGAAGGTGTTTGAAGGTGTGCCTCCACCGTATGACAAGGTCAAGAGG  Raphanus raphanistrum subsp. raphanistrum (NY)
EW723789       --> .......................................gGGTCAAGAGG  Raphanus sativus cv Early Scarlet Globe

               401    -    451
UN21312        --> ATGGTCATCCCCGATGCTCTCAAGGTCTTGAGGCTTCAAGCTGGTCACAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV543960       <-- ATGGTCATCCCCGATGCTCTCAAGGTGTTGAGGCTTCAAGCTGGTCACAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY928866       <-- ATGGTCATCCCCGATGCTCTCAAGGTCTTGAGGCTTCAAGCTGGTCACAA  Raphanus sativus var. oleiformis
EY935463       <-- ATGGTCATCCCCGATGCTCTCAAGGTCTTGAGGCTTCAAGCTGGTCACAA  Raphanus sativus cv Early Scarlet Globe
EW728435       <-- ATGGTCATCCCCGATGCTCTCAAGGTCTTGAGGCTTCAAGCTGGTCACAA  Raphanus sativus cv Early Scarlet Globe
EY939553       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EY932055       --> ATGGTCATCCCCGATGCTCTCAAGGTCTTGAGGCTTCAAGCTGGTCACAA  Raphanus sativus var. oleiformis
EY933380       --> ..................................................  Raphanus sativus var. oleiformis
EY914027       --> ATGGTCATCCCCGATGCTCTCAAGGTGTTGAGGCTTCAAGCTGGTCACAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV548251       --> ATGGTCATCCCCGATGCTCTCAAGGTGTTGAGGCTTCAAGCTGGTCACAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EW723789       --> ATGGTCATCCCCGATGCTCTCAAGGTCTTGAGGCTTCAAGCTGGTCACAA  Raphanus sativus cv Early Scarlet Globe

               451    -    501
UN21312        --> GTACTGTCTTTTGGGCCGTCTCTCTTCTGAAGTCGGGTGGAACCACTACG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV543960       <-- GTACTGTCTGTTGGGCCGTCTTTCTTCTGAAGTCGGGTGGAACCACTACG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY928866       <-- GTACTGTCTTTTGGGCCGTCTCTCTTCTGAAGTCGGGTGGAACCACTACG  Raphanus sativus var. oleiformis
EY935463       <-- GTACTGTCTTTTGGGCCGTCTCTCTTCTGAAGTCGGGTGGAACCACTACG  Raphanus sativus cv Early Scarlet Globe
EW728435       <-- GTACTGTCTTTTGGGCCGTCTCTCTTCTGAAGTCGGGTGGAACCACTACG  Raphanus sativus cv Early Scarlet Globe
EY939553       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EY932055       --> GTACTGTCTTTTGGGCCGTCTCTCTTCTGAAGTCGGGTGGAACCACTACG  Raphanus sativus var. oleiformis
EY933380       --> ..................................................  Raphanus sativus var. oleiformis
EY914027       --> GTACTGTCTGTTGGGCCGTCTTTCTTCTGAAGTCGGGTGGAACCACTACG  Raphanus raphanistrum subsp. raphanistrum (NY)
EV548251       --> GTACTGTCTGTTGGGCCGTCTTTCTTCTGAAGTCGGGTGGAACCACTACG  Raphanus raphanistrum subsp. raphanistrum (NY)
EW723789       --> GTACTGTCTTTTGGGCCGTCTCTCTTCTGAAGTCGGGTGGAACCACTACG  Raphanus sativus cv Early Scarlet Globe

               501    -    551
UN21312        --> ACACCATCAAGGAGCTGGAGACGAAGAGGAAGGAGAGATCCCAAGTTGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV543960       <-- ACACCATCAAGGAGCTGGAGACGAAGAGGAAGGAGAGATCCCAAGTTGTT
EY928866       <-- ACACCATCAAGGAGCTGGAGACGAAGAGGAAGGAGAGATCCCAAGTTGTT
EY935463       <-- ACACCATCAAGGAGCTGGAGACGAAGAGGAAGGAGAGATCCCAAGTTGTT
EW728435       <-- ACACCATCAAGGAGCTGGAGACGAAGAGGAAGGAGAGATCCCAAGTTGTT
EY939553       --> ..................................................
EY932055       --> ACACCATCAAGGAGCTGGAGACGAAGAGGAAGGAGAGATCCCAAGTTGTT
EY933380       --> ..................................................
EY914027       --> ACACCATCAAGGAGCTGGAGACGAAGAGGAAGGAGAGATCCCAAGTTGTT
EV548251       --> ACACCATCAAGGAGCTGGAGACGAAGAGGAAGGAGAGATCCCAAGTTGTT
EW723789       --> ACACCATCAAGGAGCTGGAGACGAAGAGGAAGGAGAGATCCCAAGTTGTT

               551    -    601
UN21312        --> TACGAGCGTAAGAAGCAGCTTAACAAACTTAGAGCTAAGGCTGAGAAGGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV543960       <-- TACGAGCGTAAGAAGCAGCTTAACAAACTTAGAGCTAAGGCTGAGAAGGT
EY928866       <-- TACGAGCGTAAGAAGCAGCTTAACAAACTTAGAGCTAAGGCTGAGAAGGT
EY935463       <-- TACGAGCGTAAGAAGCAGCTTAACAAACTTAGAGCTAAGGCTGAGAAGGT
EW728435       <-- TACGAGCGTAAGAAGCAGCTTAACAAACTTAGAGCTAAGGCTGAGAAGGT
EY939553       --> ..................................................
EY932055       --> TACGAGCGTAAGAAGCAGCTTAACAAACTTAGAGCTAAGGCTGAGAAGGT
EY933380       --> ..................................................
EY914027       --> TACGAGCGTAAGAAGCAGCTTAACAAACTTAGAGCTAAGGCTGAGAAGGT
EV548251       --> TACGAGCGTAAGAAGCAGCTTAACAAACTTAGAGCTAAGGCTGAGAAGGT
EW723789       --> TACGAGCGTAAGAAGCAGCTTAACAAACTTAGAGCTAAGGCTGAGAAGGT

               601    -    651
UN21312        --> GGCTGAAGAGAAGCTTGGAGCACAGCTCGAGATTCTTGCACCAGTCAAGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV543960       <-- GGCTGAAGAGAAGCTCGGAGCACAGCTCGACATTCTTGCACCAGTCAAGT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY928866       <-- GGCTGAAGAGAAGCTTGGAGCACAGCTCGAGATTCTTGCACCAGTCAAGT  Raphanus sativus var. oleiformis
EY935463       <-- GGCTGAAGAGAAGCTTGGAGCACAGCTCGAGATTCTTGCACCAGTCAAGT  Raphanus sativus cv Early Scarlet Globe
EW728435       <-- GGCTGAAGAGAAGCTTGGAGCACAGCTCGAGATTCTTGCACCAGTCAAGT  Raphanus sativus cv Early Scarlet Globe
EY939553       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EY932055       --> GGCTGAAGAGAAGCTTGGAGCACAGCTCGAGATTCTTGCACCAGTCAAGT  Raphanus sativus var. oleiformis
EY933380       --> ..................................................  Raphanus sativus var. oleiformis
EY914027       --> GGCTGAAGAGAAGCTCGGAGCACAGCTCGACATTCTTGCACCAGTCAAGT  Raphanus raphanistrum subsp. raphanistrum (NY)
EV548251       --> GGCTGAAGAGAAGCTCGGAGCACAGCTCGACATTCTTGCACCAGTCAAGT  Raphanus raphanistrum subsp. raphanistrum (NY)
EW723789       --> GGCTGAAGAGAAGCTTGGAGCACAGCTCGAGATTCTTGCACCAGTCAAGT  Raphanus sativus cv Early Scarlet Globe

               651    -    701
UN21312        --> ACTGAGATGATCATTAATAGTTTGTCTTTGCATGTTTTGAGCCGACCTAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV543960       <-- ACTGAGATGATCACTAGTAGTTTGTCTTTGCATGTTTTGAGCCGACCTAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY928866       <-- ACTGAGATGATCATTAATAGTTTGTCTTTGCATGTTTTGAGCCGACCTAT  Raphanus sativus var. oleiformis
EY935463       <-- ACTGAGATGATCATTAATAGTTTGTCTTTGCATGTTTTGAGCCGACCTAT  Raphanus sativus cv Early Scarlet Globe
EW728435       <-- ACTGAGATGATCATTAATAGTTTGTCTTTGCATGTTTTGAGCCGACCTAT  Raphanus sativus cv Early Scarlet Globe
EY939553       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EY932055       --> ACTGAGATGATCATTAATAGTTTGTCTTTGCATGTTTTGAGCCGACCTAT  Raphanus sativus var. oleiformis
EY933380       --> ..................................................  Raphanus sativus var. oleiformis
EY914027       --> ACTGAGATGATCACTAGTAGTTTGTCTTTGCATGTTT-GAGCCGACCTAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EV548251       --> ACTGAGATGATCACTAGTAGTTTGTCTTTGCATGTTTTGAGCCGACCTAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EW723789       --> ACTGAGATGATCATTAATAGTTTGTCTTTGCATGTTTTGAGCCGACCTAT  Raphanus sativus cv Early Scarlet Globe

               701    -    751
UN21312        --> AATACTTTTTTCACTTTCACTTAGGTGTTGTATCGGATTTTGCCGTAATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV543960       <-- AATACTTTTTTCACTTTCACTTAGGTGTGGTATTGGATTTTGCCGTAATG
EY928866       <-- AATACTTTTTTCACTTTCACTTAGGTGTTGTATCGGATTTTGCCGTAATG
EY935463       <-- AATACTTTTTTCACTTTCACTTAGGTGTTGTATCGGATTTTGCCGTAATG
EW728435       <-- AATACTTTTTTCACTTTCACTTAGGTGTTGTATCGGATTTTGCCGTAATG
EY939553       --> ..................................................
EY932055       --> AATACTTTTTTCACTTTCACTTAG-TGTTGTATCGGATTTTGCCGTA-TG
EY933380       --> ..................................................
EY914027       --> AATACTTTTT-CACTTTCAC..............................
EV548251       --> AATACTTTTTTCACTTTCACTTAGGTGTGGTATTGGATTTTGCCGTAATG
EW723789       --> AATACTTTTTTCACTTTCACTTAGGTGTTGTATCGGATTTTGCCGTAATG

               751    -    801
UN21312        --> TTTTCTTTCTTGAGTTACAATTTATTTATATCCCATGTCTTTCTACTTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV543960       <-- TTTTCTTTCTCGAGTTACAGTTTATTTATATCCCATGTCTTTCTACTTCT
EY928866       <-- TTTTCTTTCTTGAGTTACAATTTATTTATATCCC................
EY935463       <-- TTTTCTTTCTTGAGTTACAATTTATTT.......................
EW728435       <-- TTTTCTTTCTTGAGTTACAATTTATTg.......................
EY939553       --> ..................................................
EY932055       --> TTT-CTTTCTTGAGT-ACAATTTATT-ATATCCCATGTCT..........
EY933380       --> ..................................................
EY914027       --> ..................................................
EV548251       --> TTTTCTTTCTCGAGTTACAGTTTATTTATATCCCATGTCTTTCTACTTCT
EW723789       --> TTTTCTTTCTTGAGTTACAATTTATTg.......................

               801    -    851
UN21312        --> CTTTTTAACTTCTATCAGAATTTGTTTATCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV543960       <-- CTTTTTAACTTCTATCAGAATTTGTTTATCC
EY928866       <-- ...............................
EY935463       <-- ...............................
EW728435       <-- ...............................
EY939553       --> ...............................
EY932055       --> ...............................
EY933380       --> ...............................
EY914027       --> ...............................
EV548251       --> CTTTTTAACTTCTATCAGAATTTGTTTATCC
EW723789       --> ...............................