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Alignment for radish unigene UN21336

               1      -     51
UN21336        --> GGGGGAATCTGAAAAATTTTTTGAATGAAATAACAATACAAAACACACCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD541109       <-- ..................................................
EX888011       <-- ..................................................
EW714937       <-- ..................................................
EY937751       <-- ..................................................
FY453743       <-- ..................................................
EV535608       <-- ..................................................
FY452794       <-- ..................................................
FY453115       <-- ..................................................
EX892028       --> GGGGGAATCTGAAAAATTTTTTGAATGAAATAACAATACAAAACACACCT
EV540242       --> ..........................GAAATAACAATACAAAACACACCT
EX893268       --> ..........................GAAATAACAATACAAAACACACCT
EW719130       --> ..................................................

               51     -    101
UN21336        --> TTCATATCACAGGTATTTTTCCTGGATCAAGAATATTTTTAGAGTATATT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD541109       <-- ..................................................
EX888011       <-- ..................................................
EW714937       <-- ..................................................
EY937751       <-- ..................................................
FY453743       <-- ..................................................
EV535608       <-- ..................................................
FY452794       <-- ..................................................
FY453115       <-- ..................................................
EX892028       --> TTCATATCACAGGTATTTTTCCTGGATCAAGAATATTTTTAGAGTATATT
EV540242       --> TTCATATCACAGGTATTTTTCCTGGATCAAGAATATTTTTAGAGTATATT
EX893268       --> TTCATATCACAGGTATTTTTCCTGGATCAAGAATATTTTTAGAGTATATT
EW719130       --> ..................................................

               101    -    151
UN21336        --> ATACATAATCCTGGCTTTACCACACCCAAACATAAATGGTTTGACCATAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD541109       <-- ...........................................ACCATAT
EX888011       <-- ..................................................
EW714937       <-- ..................................................
EY937751       <-- ..................................................
FY453743       <-- ..................................................
EV535608       <-- ..................................................
FY452794       <-- ..................................................
FY453115       <-- ..................................................
EX892028       --> ATACATAATCCTGGCTTTACCACACCCAAACATAAA-AGTTTGACCATAT
EV540242       --> ATACATAATCCTGGCTTTACCACACCCAAACATTAATGGTTTGACCATAT
EX893268       --> ATACATAATCCTGGCTTTACCACACCCAAACATAAATGGTTTGACCATAT
EW719130       --> ...CATAATCCTGGCTTTACCACACCCAAACATAAATGGTTTGACCATAT

               151    -    201
UN21336        --> AAAAACCAACAACAAATAGAATCACGAAGTAGACAGATATGTGTTTTTCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD541109       <-- AAAA-CCAACAACAAATAGAATCACGAAGTAGACAGATATGTGTTTTTCC
EX888011       <-- ...........................................TTTTTCC
EW714937       <-- ..................................................
EY937751       <-- ..................................................
FY453743       <-- ..................................................
EV535608       <-- ..................................................
FY452794       <-- ..................................................
FY453115       <-- ..................................................
EX892028       --> AAAAACCAACAACAAATAGAATCACGAAGTAAACAGATATGTGTTTTTCC
EV540242       --> AAAGACCCACAACAAATAGAATCACGAAGTAGACAGATATGTGTTTTTCC
EX893268       --> AAAAACCAACAACAAATAGAATCACGAAGTAGACAGATATGTGTTTTTCC
EW719130       --> AAAAACCAACAACAAATAGAATCACGAAGTAGACAGATATGCGTTTTTCC

               201    -    251
UN21336        --> TTATGTGACCAATGATCATATTGATCATCAATCTTTTTCTTGCTATAAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD541109       <-- ATATGTGACCAATGATCATATTGATCATTAATCTTTTTCTCGCTATAAAC
EX888011       <-- TTATGTGACCAATGATCATATTGATCATCAATCTTTT-CTTGCTATAAAC
EW714937       <-- ......................................CTTGCTATAAAC
EY937751       <-- ..................................................
FY453743       <-- ..................................................
EV535608       <-- ..................................................
FY452794       <-- ..................................................
FY453115       <-- ..................................................
EX892028       --> TTATGTGACCAATGATCATATTGATCATCAATCTTTTTCTTGCTATAAAC
EV540242       --> TTATGTGACCAATGATCATATTGATCATCAATCTTTTTTTCGCTATAAAC
EX893268       --> TTATGTGACCAATGATCATATTGATCATCAATCTTTTTCTTGCTATAAAC
EW719130       --> TTATGTGACCAATGATCATATTGATCATCAATCTTTTTCTTGCTATAAAC

               251    -    301
UN21336        --> CGATCATCAAGAAAGTTTTTTGCAACAAAAAGTTCATGCTTACTTTCTGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD541109       <-- CGATCATCAAGAAAGTTTTTTGCAACAAAAAGTTCATGCTTACTTTCTGG
EX888011       <-- CGATCATCAAGAAAGTTTTT-GCAACAAAAAGTTCATGCTTACTTTCTGG
EW714937       <-- CGATCATCAAGAAAGTTTTTTGCAACAAAAAGTTCATGCTTACTTTCTGG
EY937751       <-- ........................cacAAAAGT-CATGCT-ACTT-CTG-
FY453743       <-- ..................................................
EV535608       <-- ..................................................
FY452794       <-- ..................................................
FY453115       <-- ..................................................
EX892028       --> CGATCATCAAAAAAGTTTTTTGCAACAAAAAGTTCATGCTTACTTTCTGG
EV540242       --> CGATCATCAAGAAAGTTTTTTGCAACAAAAAGTTCATGCTTACTTTCTGG
EX893268       --> CGATCATCAAGAAAGTTTTTTGCAACAAAAAGTTCATGCTTACTTTCTGG
EW719130       --> CGATCATCAAGAAAGTTTTTTGCAACAAAAAGTTCATGCTTACTTTCTGG

               301    -    351
UN21336        --> TAGATGGAAACAAGTGAAAGATCTTTTGGTGATGTGTCATTGAGGAAGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD541109       <-- TAGATGGAAACAAGTGAAAGATCTTTTGGTGATGTGTCATTGAGGAAGAA
EX888011       <-- TAGATGGAAACAAGTGAAAGATCTTTTGGTGATGTGTCATTGAGGAAGAA
EW714937       <-- TAGATGGAAACAAGTGAAAGATCTTTTGGTGATGTGTCATTGAGGAAGAA
EY937751       <-- TAGAT--GAACAAGTGAAAGATCTTTTG-TGATGTGTCAT-GAG-AAGAA
FY453743       <-- ...............................................agA
EV535608       <-- ..................................................
FY452794       <-- ..................................................
FY453115       <-- ..................................................
EX892028       --> TAAATGGAAACAAGTGAAAAATCTTTTGGTGATGTGTCATTGAGGAAAAA
EV540242       --> TAGATGGAAACAAGTGAAAGATCTTTTGGTGATGTGTCATTGAGGAAGAA
EX893268       --> TAGATGGAAACAAGTGAAAGATCTTTTGGTGATGTGTCATTGAGGAAGAA
EW719130       --> TAGATGGAAACAAGTGAAAGATCTTTTGGTGATGTGTCATTGAGGAAGAA

               351    -    401
UN21336        --> CAGGAGGTGCGACGGCTCTGGTGTTGTAAGATCTACAGTGTCCACATTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD541109       <-- CGGGAGGTGCGACCGCTCTGGTGTTGTAAGATCTACAGTGTCCACATTTC
EX888011       <-- CAGGAGGTGCGACGGCTCTGGTGTTGTAAGATCTACAGTGTCCACATTTC
EW714937       <-- CAGGAGGTGCGACGGCTCTGGTGTTGTAAGATCTACAGTGTCCACATTTC
EY937751       <-- CAGGAG-TGCGACGGCTCTGGTGTTGTAAGATCTACAATGTCCACATTTC
FY453743       <-- CAGGAGGTGCGACGGCTCTGGTGTTGTAAGATCTACAGTGTCCACATTTC
EV535608       <-- ..................................................
FY452794       <-- ..................................................
FY453115       <-- ..................................................
EX892028       --> CAGGAGGTGCGACGGCTCTGGGGTTGTAAAATCTACAGTGTCCACATTTC
EV540242       --> CAGGAGGTGCGACGGCTCTGGTGTTGTAAGATCTACAGTGTCCACATTTC
EX893268       --> CAGGAGGTGCGACGGCTCTGGTGTTGTAAGATCTACAGTGTCCACATTTC
EW719130       --> CAGGAGGTGCGACGGCTCTGGTGTTGTAAGATCTACAGTGTCCACATTTC

               401    -    451
UN21336        --> TGTCCTATTATGTGGAAATAAACTTCTGTTGTGTCGTTACAGTCGTTGCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD541109       <-- TGTCCTATTATGTAGAAATATACTTCTGTTGTGTCGTTACAGTCGTTGCA
EX888011       <-- TGTCCTATTATGTGGAAATAAACTTCTGTTGTGTCGTTACAGTCGTTGCA
EW714937       <-- TGTCCTATTATGTGGAAATAAACTTCTGTTGTGTCGTTACAGTCGTTGCA
EY937751       <-- TGTC-TATTATGTGAAAATAAACTTCTGTGGTGTCGTTACAGTCGTTGTA
FY453743       <-- TGTCCTATTATGTGGAAATAAACTTCTGTTGTGTCGTTACAGTCGTTGCA
EV535608       <-- ..................................................
FY452794       <-- ..................................................
FY453115       <-- ..................................................
EX892028       --> TGTCCTATTATGTGGAAATAAACTTCTGTTGTGTCGTTACAGTCGTTGCA
EV540242       --> TGTCCTATTATGTGGAAATAAACTTCTGTTGTGTCGTTACAGTCGTTGCA
EX893268       --> TGTCCTATTATGTGGAAATAAACTTCTGTTGTGTCGTTACAGTCGTTGCA
EW719130       --> TGTCCTATTATGTGGAAATAAACTTCTGTTGTGTCGTTACAGTCGTTGCA

               451    -    501
UN21336        --> TAGTATCCACACCTTCTTGTCGCGGTAATCTGAAGGCATAGAAGTGGCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD541109       <-- TAGTATCCACACCTTCTTGTCGCGGTAATCTGAAGGCATAGAAGTGGCTT
EX888011       <-- TAGTATCCACACCTTCTTGTCGCGGTAATCTGAAGGCATAGAAGTGGCTT
EW714937       <-- TAGTATCCACACCTTCTTGTCGCGGTAATCTGAAGGCATAGAAGTGGCTT
EY937751       <-- TAGTATCCACACCTTCTTGTCGCGGTAATCTGAAGGCATAGAAGTGGCTT
FY453743       <-- TAGTATCCACACCTTCTTGTCGCGGTAATCTGAAGGCATAGAAGTGGCTT
EV535608       <-- ................TTGTCGCGGTAATCTGAAGGCATAGAAGTGGCTT
FY452794       <-- ..............................TGAAGGCATAGAAGTGGCTT
FY453115       <-- ..................................................
EX892028       --> TAGTATCCACACCTTCTTGTCCCGGTAATCTGAAGGCATAAAAGTGGCTT
EV540242       --> TAGTATCCACACCTTCTTGTCGCGGTAATCTGAAGGCATAGAAGTGGCTT
EX893268       --> TAGTATCCACACCTTCTTGTCGCGGTAATCTGAAGGCATAGAAGTGGCTT
EW719130       --> TAGTATCCACACCTTCTTGTCGCGGTAATCTGAAGGCATAGAAGTGGCTT

               501    -    551
UN21336        --> CAATCTCTTCATCCATTCTCTGCCATGTTTTTGACATATCAATCACTGAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD541109       <-- CAATCTCTTCATCCATTCTCTGCCATGTTTTTGACATATCAATCACTGAC
EX888011       <-- CAATCTCTTCATTCATTCTCTGCCATGTTTTTGACATATCAATCACTGAC
EW714937       <-- CAATCTCTTCATCCATTCTCTGCCATGTTTTTGACATATCAATCACTGAC
EY937751       <-- CAATCTCTTCATCCATTCTCTGCCATGTTTTTGACATATCAATCACTGAC
FY453743       <-- CAATCTCTTCATCCATTCTCTGCCATGTTTTTGACATATCAATCACTGAC
EV535608       <-- CAATCTCTTCATCCATTCTCTGCCATGTTTTTGACATATCAATCACTGAC
FY452794       <-- CAATCTCTTCATCCATTCTCTGCCATGTTTTTGACATATCAATCACTGAC
FY453115       <-- ................................GACATATCAATCACTGAC
EX892028       --> CAATCTCTTCATTCATTCTCTGCCATGTTTTTGACATATCAATCACTGAC
EV540242       --> CAATCTCTTCATCCATTCTCTGCCATGTTTTTGACATATCAATCACTGAC
EX893268       --> CAATCTCTTCATCCATTCTCTGCCATGTTTTTGACATATCAATCACTGAC
EW719130       --> CAATCTCTTCATCCATTCTCTGCCATGTTTTTGACATATCAATCACTGAC

               551    -    601
UN21336        --> CTCGAGCAAATAGGACAGCAAAATTTGTCACGCTTGATCATCTCATGGTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD541109       <-- CTCGAGCAAATAGGACAGCAAAATTTGTCACGCTTGATCATCTCATGGTA
EX888011       <-- CTCGAGCAAATAGGACAGCAAAATTTGTTACGCTTGATCATCTCATGGTA
EW714937       <-- CTCGAGCAAATAGGACAGCAAAATTTGTCACGCTTGATCATCTCATGGTA
EY937751       <-- CTCGAGCAAATAGGACAGCAAAATTTGTCACGCTTGATCATCTCATGGTA
FY453743       <-- CTCGAGCAAATAGGACAGCAAAATTTGTCACGCTTGATCATCTCATGGTA
EV535608       <-- CTCGAGCAAATAGGACAGCAAAATTTGTCACGCTTGATCATCTCATGGTA
FY452794       <-- CTCGAGCAAATAGGACAGCAAAATTTGTCACGCTTGATCATCTCATGGTA
FY453115       <-- CTCGAGCAATAGGGACAGCAAAATTTGTCACGCTTGATCATCTCATGGTA
EX892028       --> ..................................................
EV540242       --> CTCGAGCAAATAGGACAGCAAAATTTGTCACGCTTGATCATCTCATGGTA
EX893268       --> CTCGAGCAAATAGGACAGCAAAATTTGTCACGCTTGATCATCTCATGGTA
EW719130       --> CTCGAGCAAATAGGACAGCAAAATTTGTCACGCTTGATCATCTCATGGTA

               601    -    651
UN21336        --> GCATTCACAGTGCATAGTGTGTCCACATTTCATCACTGTTGTTTCTTTAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD541109       <-- GCATTCACAGTGCATAGTGTGTCCACATTTCATCACTGTTGTTTCTTTAA
EX888011       <-- GTATTCACAGTGCATAGTGTGTCCACATTTCATCACTGTTGTTTCTTTAA
EW714937       <-- GCATTCACAGTGCATAGTGTGTCCACATTTCATCACTGTTGTTTCTTTAA
EY937751       <-- GCATTCACAGTGCATAGTGTGTCCACATTTCATCACTGTTGTTTCTTTAA
FY453743       <-- GCATTCACAGTGCATAGTGTGTCCACATTTCATCACTGTTGTTTCTTTAA
EV535608       <-- GCATTCACAGTGCATAGTGTGTCCACATTTCATCACTGTTGTTTCTTTAA
FY452794       <-- GCATTCACAGTGCATAGTGTGTCCACATTTCATCACTGTTGTTTCTTTAA
FY453115       <-- GCATTCACAGTGCATAGTGTGTCCACATTTCATCACTGTTGTTTCTTTAA
EX892028       --> ..................................................
EV540242       --> GCATTCACAGTGCATAGTGTGTCCACATTTCATCACTGTTGTTTCTTTAA
EX893268       --> GCATTCACAGTGCATAGTGTGTCCACATTTCATCACTGTTGTTTCTTTAA
EW719130       --> GCATTCACAGTGCATAGTGTGTCCACATTTCATCACTGTTGTTTCTTTAA

               651    -    701
UN21336        --> GAGAGTCAAAGAGATACTCGTAACAAATGGGACAGTGATGTCTCATTGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD541109       <-- GAGAGTCAAAGAGATACTCGTAACAAATGGGGCAGTGATGTCGCATTGAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX888011       <-- GAGAGTCAAAGAGATACTCGTAACAAATGGGACAGTGATGTCTCATTGAA  Raphanus sativus var. oleiformis
EW714937       <-- GAGAGTCAAAGAGATACTCGTAACAAATGGGACAGTGATGTCTCATTGAA  Raphanus sativus var. oleiformis
EY937751       <-- GAGAGTCAAAGAGATACTCGTAACAAATGGGGCAGTGATGTCGCATTGAA  Raphanus sativus cv Early Scarlet Globe
FY453743       <-- GAGAGTCAAAGAGATACTCGTAACAAATGGGACAGTGATGTCTCATTGAA  Raphanus sativus cv GSK3-1
EV535608       <-- GAGAGTCAAAGAGATACTCGTAACAAATGGGGCAGTGATGTCGAATTGAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FY452794       <-- GAGAGTCAAAGAGATACTCGTAACAAATGGGACAGTGATGTCTCATTGAA  Raphanus sativus cv GSK3-1
FY453115       <-- GAGAGTCAAAGAGATACTCGTAACAAATGGGACAGTGATGTCTCATTGAA  Raphanus sativus cv GSK3-1
EX892028       --> ..................................................  Raphanus sativus var. oleiformis
EV540242       --> GAGAGTCAAAGAGATACTCGTAACAAATGGGGCAGTGATGTCGAATTGAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX893268       --> GAGAGTCAAAGAGATACTCGTAACAAATGGGACAGTGATGTCTCATTGAA  Raphanus sativus var. oleiformis
EW719130       --> GAGAGTCAAAGAGATACTCGTAACAAATGGGACAGTGATGTCTCATTGAA  Raphanus sativus var. oleiformis

               701    -    751
UN21336        --> TCCTCAACGCAGCGATGGTTGTTGCGCAGACCAGTCGCATAACAAGATCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD541109       <-- TCCTCAACGCAGCGATGGTTGTTGCGCAGACCAGTCGCATAACAAGACCC
EX888011       <-- TCCTCAACGCAGCGATGGTTGTTGCGCAGACCAGTCGCATAACAAGATCC
EW714937       <-- TCCTCAACGCAGCGATGGTTGTTGCGCAGACCAGTCGCATAACAAGATCC
EY937751       <-- TCCTCAACGCAGCGATGGTTGTTGCGCAGACCAGTCGCATAACAAGATCC
FY453743       <-- TCCTCAACGCAGCGATGGTTGTTGCGCAGACCAGTCGCATAACAAGATCC
EV535608       <-- TCCTCAACGCAGCGATGGTTGTTCCGCAGACCAGTCGCATAACAAGATCC
FY452794       <-- TCCTCAACGCAGCGATGGTTGTTGCGCAGACCAGTCGCATAACAAGATCC
FY453115       <-- TCCTCAACGCAGCGATGGTTGTTGCGCAGACCAGTCGCATAACAAGATCC
EX892028       --> ..................................................
EV540242       --> TCCTCAACGCAGCGATGGTTGTTCCGCAGACCAGTCGCATAACAAGATCC
EX893268       --> TCCTCAACGCAGCGATGGTTGTTGCGCAGACCAGTCGCATAACAAGATCC
EW719130       --> TCCTCAACGCAGCGATGGTTGTTGCGCAGACCAG................

               751    -    801
UN21336        --> ACATTTCTTGCAATGGAAGAAGTTCTCACGTCCACCAACTCTGCAGATTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD541109       <-- ACATTTCTTGCAATGGAAGAAGTTCTCACGTCCACCAACTCTGCAGATTC
EX888011       <-- ACATTTCTTGCAATGGAAGAAGTTCTCACGTCCACCAACTCTGCAGATTC
EW714937       <-- ACATTTCTTGCAATGGAAGAAGTTCTCACGTCCACCAACTCTGCAGATTC
EY937751       <-- ACATTTCTTGCAATGGAAGAAGTTGTCACGTCCACCAACTCTGCAGATTC
FY453743       <-- ACATTTCTTGCAATGGAAGAAGTTCTCACGTCCACCAACTCTGCAGATTC
EV535608       <-- ACATTTCTTGCAATGGAAGAAGTTCTCACGTCCACCAACTCTGCAGATTC
FY452794       <-- ACATTTCTTGCAATGGAAGAAGTTCTCACGTCCACCAACTCTGCAGATTC
FY453115       <-- ACATTTCTTGCAATGGAAGAAGTTCTCACGTCCACCAACTCTGCAGATTC
EX892028       --> ..................................................
EV540242       --> ACATTTCTTGCAATGGAAGAAGTTCTCACGTCCACCAACTCTGCAGATTC
EX893268       --> ACATTTCTTGCAATGGAAGAAGTTCTCACGTCCACCAACTCTGCAGATTC
EW719130       --> ..................................................

               801    -    851
UN21336        --> CACAGTCATCACAATGGAACTGTTGTTTCTCAGTATTATCATCATAGAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD541109       <-- CACAGTCATCACAATGGAACTGCTGCTTCTCAGTGTTATCATCATAGAAC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX888011       <-- CACAGTCATCACAATGGAACTGTTGTTTCTCAGTATTATCATCATAGAAC  Raphanus sativus var. oleiformis
EW714937       <-- CACAGTCATCACAATGGAACTGTTGTTTCTCAGTATTATCATCATAGAAC  Raphanus sativus var. oleiformis
EY937751       <-- CACAGTCATCACAATGGAACTGTTGTTTCTCAGTATTATCATCATAGAAC  Raphanus sativus cv Early Scarlet Globe
FY453743       <-- CACAGTCATCACAATGGAACTGTTGTTTCTCAGTGTTATCATCATAGAAC  Raphanus sativus cv GSK3-1
EV535608       <-- CACAGTCATCACAATGGAACTGTTGTTTCTCAGTATTATCATCATAGAAC  Raphanus raphanistrum subsp. raphanistrum (MS)
FY452794       <-- CACAGTCATCACAATGGAACTGTTGTTTCTCAGTGTTATCATCATAGAAC  Raphanus sativus cv GSK3-1
FY453115       <-- CACAGTCATCACAATGGAACTGTTGTTTCTCAGTGTTATCATCATAGAAC  Raphanus sativus cv GSK3-1
EX892028       --> ..................................................  Raphanus sativus var. oleiformis
EV540242       --> CACAGTCATCACAATGGAACTGTTGTTTCTCAGTATTATCATCATAGAAC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX893268       --> CACAGTCATCACAATGGAACTGTTGTTTCTCAGTATTATCATCATAGA-C  Raphanus sativus var. oleiformis
EW719130       --> ..................................................  Raphanus sativus var. oleiformis

               851    -    901
UN21336        --> TTGCAGATATTGCAAAAGTATTCTCCCATGTTGACACCACAGTTGGAGCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD541109       <-- TTGCAGATATTGC.....................................
EX888011       <-- TTGCAGATATTGCAAAAGTATTCTCCCATGTTGACACCACAGTTGGAGCA
EW714937       <-- TTGCAGATATTGCAAAAGTATTCTCCCATGTTGACACCACAGTTGGAGCA
EY937751       <-- TTGCAGATATTGCAAAAGTATTCTCCCATGTTGACACCACAGTTGGAGCA
FY453743       <-- TTGCAGATATTGCAAAAGTATTCTCCCATGTTGACACCACAGTTGGAGCA
EV535608       <-- TTGCAGATATTGCAAAAGTATTCTCCCATGTTGACACCACAGTTGGAGCG
FY452794       <-- TTGCAGATATTGCAAAAGTATTCTCCCATGTTGACACCACAGTTGGAGCA
FY453115       <-- TTGCAGATATTGCAAAAGTATTCTCCCATGTTGACACCACAGTTGGAGCA
EX892028       --> ..................................................
EV540242       --> TTGCAGATATTGCAAAAGTATTCTCCCATGTTGACAC.............
EX893268       --> TTGCAGATATTGCAAA-GTATT............................
EW719130       --> ..................................................

               901    -    951
UN21336        --> TATTTGAGCTACCGGTTGCTCTGTATCGCAAACAGAACAAATCACTTGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD541109       <-- ..................................................
EX888011       <-- TATTTGAGCTACCGGTTGCTCTGTATCGCAAACAGAACAAATCACTTGTc
EW714937       <-- TATTTGAGCTACCGGTTGCTCTGTATCGCAAACAGAACAAATCACTTGTT
EY937751       <-- TATTTGAGCTACCGGTTGCTCTGTATCGCAAACAGAACAAAACACTTGTT
FY453743       <-- TATTTGAGCTACCGGTTGCTCTGTATCGCAAACAGAACAAATCACTTGTT
EV535608       <-- TATTTGAGCTACCGGTTGCTCTGTATCGCAAACAGAACAAATCACTTGTT
FY452794       <-- TATTTGAGCTACCGGTTGCTCTGTATCGCAAACAGAACAAATCACTTGTT
FY453115       <-- TATTTGAGCTACCGGTTGCTCTGTATCGCAAACAGAACAAATCACTTGTT
EX892028       --> ..................................................
EV540242       --> ..................................................
EX893268       --> ..................................................
EW719130       --> ..................................................

               951    -   1001
UN21336        --> TAACGTCTTGACGAACAAGCTCATGACGGTCGTAAATATTGCGCAGAGTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD541109       <-- ..................................................
EX888011       <-- c.................................................
EW714937       <-- TAACGTCTTGACGAACAAGCTCATGACGGTCGTAAATATTGCGCAGAGTG
EY937751       <-- TAACGTCTTGACGAACAAGCTCATGACGGTCGTAAATATTGCGCAGAGTG
FY453743       <-- TAACGTCTTGACGAACAAGCTCATGACGGTCGTAAATATTGCGCAGAGTG
EV535608       <-- TAACGTCTTGACGAACAAGCTCATGACGGTCGTAGATATTGCGCAAAGTG
FY452794       <-- TAACGTCTTGACGAACAAGCTCATGACGGTCGTAAATATTGCGCAGAGTG
FY453115       <-- TAACGTCTTGACGAACAAGCTCATGACGGTCGTAAATATTGCGCAGAGTG
EX892028       --> ..................................................
EV540242       --> ..................................................
EX893268       --> ..................................................
EW719130       --> ..................................................

               1001   -   1051
UN21336        --> CTAGTGAACTCGTTATGGCAATGGCGACAATCGAAGACTTCGTTGCAACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD541109       <-- ..................................................
EX888011       <-- ..................................................
EW714937       <-- CTAGTGAACTCc......................................
EY937751       <-- CTAGTGAACTCGTTATGGCAATGGCGACAATCGAAGACTTCGTTGCAACA
FY453743       <-- CTAGTGAACTCGTTATGGCAATGGCGACAATCGAAGACTTCGTTGCAACA
EV535608       <-- CTAGTGAACTCGTTATGACAATGGCGACAATCGAAGACTTCGTTGCAACA
FY452794       <-- CTAGTGAACTCGTTATGGCAATGGCGACAATCGAAGACTTCGTTGCAACA
FY453115       <-- CTAGTGAACTCGTTATGGCAATGGCGACAATCGAAGACTTCGTTGCAACA
EX892028       --> ..................................................
EV540242       --> ..................................................
EX893268       --> ..................................................
EW719130       --> ..................................................

               1051   -   1101
UN21336        --> AGGAGCTCTGATCTGGCATCTCCTCCTGTAATGTTGACACCCGAAACCCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD541109       <-- ..................................................
EX888011       <-- ..................................................
EW714937       <-- ..................................................
EY937751       <-- AGGAGCTCTc........................................
FY453743       <-- AGGAGCTCTGATCTGGCATCTCCTCCTGTAATGTTGACACCCGAAACCCA
EV535608       <-- GGGAGCTCTGATCTGGCACCTCCTCCTGTAATGCTGACACCCGAAACCCA
FY452794       <-- AGGAGCTCTGATCTGGCATCTCCTCCTGTAATGTTGACACCCGAAACCCA
FY453115       <-- AGGAGCTCTGATCTGGCATCTCCTCCTGTAATGTTGACACCCGAAACCCA
EX892028       --> ..................................................
EV540242       --> ..................................................
EX893268       --> ..................................................
EW719130       --> ..................................................

               1101   -   1151
UN21336        --> TCTTGCCAAAATGAAGTCGATCATTGGGTGAGGCTTCCATGAGAACAGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD541109       <-- ..................................................
EX888011       <-- ..................................................
EW714937       <-- ..................................................
EY937751       <-- ..................................................
FY453743       <-- TCTTGCCAAAATGAAGTCGATCATTGGGTGAGGCTTCCATGAGAACAGGA
EV535608       <-- TCTTGCCAAAACGAAGTCGATCATTGGGTGATGCTTCCATGAGAACAGGA
FY452794       <-- TCTTGCCAAAATGAAGTCGATCATTGGGTGAGGCTTCCATGAGAACAGGA
FY453115       <-- TCTTGCCAAAATGAAGTCGATCATTGGGTGAGGCTTCCATGAGAACAGGA
EX892028       --> ..................................................
EV540242       --> ..................................................
EX893268       --> ..................................................
EW719130       --> ..................................................

               1151   -   1201
UN21336        --> GGAGAGAAGCTGATATAGATAGAGAGAGAGAGATGTGAAAAGTTTAACTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD541109       <-- ..................................................
EX888011       <-- ..................................................
EW714937       <-- ..................................................
EY937751       <-- ..................................................
FY453743       <-- GGAGAGAAGCTGATATAGATAGAGAGAGAGAGATGTGAAAAGTTTAACTC
EV535608       <-- GGAGAGAAGCTGA.....................................
FY452794       <-- GGAGAGAAGCTGATATAGATAGAGAGAGAGAGATGTGAAAAGTTTAACTC
FY453115       <-- GGAGAGAAGCTGATATAGATAGAGAGAGAGAGATGTGAAAAGTTTAACTC
EX892028       --> ..................................................
EV540242       --> ..................................................
EX893268       --> ..................................................
EW719130       --> ..................................................

               1201   -   1251
UN21336        --> TTTCTCTCTCTAACTATATATTATATTGAGTGAAGAAGAAGCGGATTTGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD541109       <-- ..................................................
EX888011       <-- ..................................................
EW714937       <-- ..................................................
EY937751       <-- ..................................................
FY453743       <-- TT-CTCTCTC........................................
EV535608       <-- ..................................................
FY452794       <-- TTTCTCTCTCTAACTATATATTATATTGAGTGAAGAAGAAGCGGATTTGG
FY453115       <-- TTTCTCTCTCTAACTATATATTATATTGAGTGAAGAAGAAGCGGATTTGG
EX892028       --> ..................................................
EV540242       --> ..................................................
EX893268       --> ..................................................
EW719130       --> ..................................................

               1251   -   1301
UN21336        --> ATTGGATTGGATTGGACTGAATGGGCCTTGAAGCTGAAAGATTTATCGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD541109       <-- ..................................................
EX888011       <-- ..................................................
EW714937       <-- ..................................................
EY937751       <-- ..................................................
FY453743       <-- ..................................................
EV535608       <-- ..................................................
FY452794       <-- ATTGGATTGGATTGGACTGAATGGGCCTTGAAGCTGAAAGATTTATCGGA
FY453115       <-- ATTGGATTGGATTGGACTGAATGGGCCTTGAAGCTGAAAGATTTATCGGA
EX892028       --> ..................................................
EV540242       --> ..................................................
EX893268       --> ..................................................
EW719130       --> ..................................................

               1301   -   1351
UN21336        --> ATCGCAAGGCTGATAATGAAAACAGAGACCCCACTTCTTGTTCTCCAACC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD541109       <-- ..................................................
EX888011       <-- ..................................................
EW714937       <-- ..................................................
EY937751       <-- ..................................................
FY453743       <-- ..................................................
EV535608       <-- ..................................................
FY452794       <-- ATC...............................................
FY453115       <-- ATCGCAAGGCTGATAATGAAAACAGAGACCCCACTTCTTGTTCTCCAACC
EX892028       --> ..................................................
EV540242       --> ..................................................
EX893268       --> ..................................................
EW719130       --> ..................................................

               1351   -   1401
UN21336        --> TTCCTATTTGCAGGGAATGACGAGAGAAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD541109       <-- ..............................
EX888011       <-- ..............................
EW714937       <-- ..............................
EY937751       <-- ..............................
FY453743       <-- ..............................
EV535608       <-- ..............................
FY452794       <-- ..............................
FY453115       <-- TTCCTATTTGCAGGGAATGACGAGAGAAAG
EX892028       --> ..............................
EV540242       --> ..............................
EX893268       --> ..............................
EW719130       --> ..............................