1      -     51
UN21374        --> GGAGGCCGACGGAGAAAACCTTGACAAAACACCAAAGTGTTCAAACAATA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD552575       <-- ..................................................
FD529294       <-- ..................................................
FD982753       <-- ..................................................
FD555112       <-- ..................................................
EV530146       <-- ..................................................
FD532975       --> GGAGGCCGACGGAGAAAACCTTGACAAAACACCAAAGTGTTCAAACAATA
EX765808       --> ...ggaCGACGGAGAAAACCTTGACAAAACACCAAAGTGTTCAAACAATA
EY947738       --> ...............................ggAAAGTGTTCAAACAATA
FD556235       --> ........................................ggAAACAATA
FD559406       --> ........................................ggAAACAATA
FD986512       --> ..................................................
EV525385       --> ..................................................

               51     -    101
UN21374        --> AAAAGGAATCTCCGTCCTAAAATTCCAGAATCGATTAGGTTTTTTTCCGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD552575       <-- ..................................................
FD529294       <-- ..................................................
FD982753       <-- ..................................................
FD555112       <-- ..................................................
EV530146       <-- ..................................................
FD532975       --> AAAAGGAATCTCCGTCCTAAAATTCCAGAATCGATTAGGTTTTTTTCCGA
EX765808       --> AAAAGGAATCTCTGTCCTAAAATTCCAGAATCGATTAGGTTTTTTTCCGA
EY947738       --> AAAAGGAATCTCCGTCCTAAAATTCCAGAATCGATTAGGTTTTTTTCCGA
FD556235       --> AAAAGGAATCACCGTCCTAAAATTCCAGAATCGATTAGGTTTTTTTCCGA
FD559406       --> AAAAGGAATCACCGTCCTAAAATTCCAGAATCGATTAGGTTTTTTTCCGA
FD986512       --> .......................................TTTTTTTCCGA
EV525385       --> ..............................................CCGA

               101    -    151
UN21374        --> CAAGAAACGCTGAGAGATGCAATCGCTGGCGCTAAATCCGGCATCCATTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD552575       <-- ..................................................
FD529294       <-- ..................................................
FD982753       <-- ..................................................
FD555112       <-- ..................................................
EV530146       <-- ..................................................
FD532975       --> CAAGAAACGCTGAGAGATGCAATCGCTGGCGCTAAATCCGGCATCCATTC
EX765808       --> CAAGAAACGCTGAGAGATGCAATCGCTGGCGCTAAATCCGGCATCCATTC
EY947738       --> CAAGAAACGCTGAGAGATGCAATCGCTGGCGCTAAATCCGGCATCCATTC
FD556235       --> CAAGAAACGCTGAGAGATGCAATCGCTGGCGCTAAATCCGGCATCCATTC
FD559406       --> CAAGAAACGCTGAGAGATGCAATCGCTGGCGCTAAATCCGGCATCCATTC
FD986512       --> CAAGAAACGCTGAGAGATGCAACCGCTGGCGCTAAATCCGGCATCCATTC
EV525385       --> CAAGAAACGCTGAGAGATGCAATCGCTGGCGCTAAATCCGGCATCCATTC

               151    -    201
UN21374        --> CCAGGTCGGCGCCACGAACCCTACCCCTAGAGCCTTCCTTCTCTCGTTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD552575       <-- ..............................AGCCTTCCTTCTCTCGTTTT
FD529294       <-- .........................................TCTCGTTTT
FD982753       <-- .........................................TCTCGTTTT
FD555112       <-- ..................................................
EV530146       <-- ..................................................
FD532975       --> CCAGGTCGGCGCCACGAACCCTACCCCTAGAGCCTTCCTTCTCTCGTTTT
EX765808       --> CCAGGTCGGCGCCACGAACCCTACCCCTAGAGCCTTCCTTCTCTCGTTTT
EY947738       --> CCAGGTCGGCGCCACGAACTCTACCCCTAGAGCCTTCCTTCTCTCGTTTT
FD556235       --> CCAGGTCGGCGCCACGAACCCTACCCCTAGAGCCTTCCTTCTCTCGTTTT
FD559406       --> CCAGGTCGGCGCCACGAACCCTACCCCTAGAGCCTTCCTTCTCTCGTTTT
FD986512       --> CCAGGTCGGCGCCACGAACCCTACCCCTAGAGCCTTCCTTCTCTCGTTTT
EV525385       --> CCAGGTCGGCGCCACGAACCCTACCCCTAGAGCCTTCCTTCTCTCGTTTT

               201    -    251
UN21374        --> CTTTCTTCTGCTCAGAGTTTGAGCTCCCAACGCTCTTTTGCTCTCGTAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD552575       <-- CTTTCTTCTGCTCAGAGTTTGAGCTCCCAACGCTCTTTTGCTCTCGTAGC  Raphanus raphanistrum subsp. landra
FD529294       <-- CTTTCTTCTGCTCAGAGTTTGAGCTCCCAACGCGCTTTTGCTCTCGTAGC  Raphanus raphanistrum subsp. maritimus
FD982753       <-- CTTTCTTCTGCTCAGAGTTTGAGCTCCCAACGCTCTTTTGCTCTCGTAGC  Raphanus raphanistrum subsp. landra
FD555112       <-- ..................................................  Raphanus raphanistrum subsp. landra
EV530146       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD532975       --> CTTTCTTCTGCTCAGAGTTTGAGCTCCCAACGCGCTTTTGCTCTCGTAGC  Raphanus raphanistrum subsp. maritimus
EX765808       --> CTTTCTTCTGCTCAGAGTTTGAGCTCCCAACGCGCTTTTGCTCTCGTAGC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY947738       --> CTTTCTTCTGCTCAGAGTTTGAGCTCCCAACGCGCTTTTGCTCTCGTAGC  Raphanus sativus cv Rat-Tail Radish #3870
FD556235       --> CTTTCTTCTGCTCAGAGTTTGAGCTCCCAACGCTCTTTTGCTCTCGTAGC  Raphanus raphanistrum subsp. landra
FD559406       --> CTTTCTTCTGCTCAGAGTTTGAGCTCCCAACGCTCTTTTGCTCTCGTAGC  Raphanus raphanistrum subsp. landra
FD986512       --> CTTTCTTCTGCTCAGAGTTTGAGCTCCCAACGCTCTTTTGCTCTCGTAGC  Raphanus raphanistrum subsp. landra
EV525385       --> CTTTCTTCTGCTCAGAGTTTGAGCTCCCAACGCGCTTTTGCTCTCGTAGC  Raphanus raphanistrum subsp. maritimus

               251    -    301
UN21374        --> TAG---GCCTCGTAATCGATTTCCAGGATTATCTCAATCTCTCTCTAGTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD552575       <-- TAG---GCCTCGTAATCGATTTCCAGGATTATCTCAATCTCTCTCTAGTC
FD529294       <-- TAG---GCCTCGTAATCGATTTCCAGGATTATCTCAATCTCTCTCTAGTC
FD982753       <-- TAGTAGGCCTCGTAATCGATTTCCAGGATTATCTCAATCACTCTCTAGTC
FD555112       <-- ....................................ATCTCTCTCTAGTC
EV530146       <-- ..................................................
FD532975       --> TAG---GCCTCGTAATCGATTTCCAGGATTATCTCAATCTCTCTCTAGTC
EX765808       --> TAG---GCCTCGTAATCGATTTCCAGGATTATCTCAATCTCTCTCTAGTC
EY947738       --> TAG---GCCTCGTAATCGATTTCCAGGATTATCTCAGTCTCTCTCTAGTC
FD556235       --> TAG---GCCTCGTAATCGATTTCCAGGATTATCTCAATCTCTCTCTAGTC
FD559406       --> TAG---GCCTCGTAATCGATTTCCAGGATTATCTCAATCTCTCTCTAGTC
FD986512       --> TAGTAGGCCTCGTAATCGATTTCCAGGATTATCTCAATCACTCTCTAGTC
EV525385       --> TAG---GCCTCGTAATCGATTTCCAGGATTATCTCAATCTCTCTCTAGTC

               301    -    351
UN21374        --> GACGA---TCCCAAGTTGTAAAGGCAGTGGCAACCCCAGACCCAATCTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD552575       <-- GACGA---TCCCAAGTTGTGAAGGCAGTGGCAACCCCAGACCCAGTCTTG
FD529294       <-- GACGA---TCCCAAGTTGTAAAGGCAGTGGCAACCCCAGACCCAATCTTG
FD982753       <-- GACGACGATCCCAAGTTGTAAAGGCAGTGGCAACCCCAGACCCAATCTTG
FD555112       <-- GACGA---TCCCAAGTTGTGAAGGCAGTGGCAACCCCAGACCCAGTCTTG
EV530146       <-- ............AAGTTGTAAAGGCAGTGGCAACCCCAGACCCAATCTTG
FD532975       --> GACGA---TCCCAAGTTGTAAAGGCAGTGGCAACCCCAGACCCAATCTTG
EX765808       --> GACGA---TCCCAAGTTGTAAAGGCAGTGGCAACCCCAGACCCAATCTTG
EY947738       --> GACGACGATCCCAAGTTGTAAAGGCAGTGGGAACCCCAGACTCAGTCTTG
FD556235       --> GACGA---TCCCAAGTTGTGAAGGCAGTGGCAACCCCAGACCCAGTCTTG
FD559406       --> GACGA---TCCCAAGTTGTGAAGGCAGTGGCAACCCCAGACCCAGTCTTG
FD986512       --> GACGACGATCCCAAGTTGTAAAGGCAGTGGCAACCCCAGACCCAATCTTG
EV525385       --> GACGA---TCCCAAGTTGTAAAGGCAGTGGCAACCCCAGACCCAATCTTG

               351    -    401
UN21374        --> GAAGTACCCTTGACGGAGGAAAACGTTGAAAGCGTTTTGGACGAAATCAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD552575       <-- GCAGTACCCTTGACAGAGGAAAACGTTGAAAGCGTTTTGGACGAAATCAG
FD529294       <-- GAAGTACCCTTGACGGAGGAAAACGTTGAAAGCGTTTTGGACGAAATCAG
FD982753       <-- GAAGTACCCTTGACGGAGGAAAACGTTGAAAGCGTTTTGGACGAAATCAG
FD555112       <-- GCAGTACCCTTGACAGAGGAAAACGTTGAAAGCGTTTTGGACGAAATCAG
EV530146       <-- GAAGTACCCTTGACGGAGGAAACCGTTGAAAGCGTTTTGGACGAAATCAG
FD532975       --> GAAGTACCCTTGACGGAGGAAAACGTTGAAAGCGTTTTGGACGAAATCAG
EX765808       --> GAAGTACCCTTGACGGAGGAAAACGTTGAAAGCGTTTTGGACGAAATCAG
EY947738       --> GAAGTACCCTTGACGGAGGAAAACGTTGAAAGCGTTTTGGACGAAATCAG
FD556235       --> GCAGTACCCTTGACAGAGGAAAACGTTGAAAGCGTTTTGGACGAAATCAG
FD559406       --> GCAGTACCCTTGACAGAGGAAAACGTTGAAAGCGTTTTGGACGAAATCAG
FD986512       --> GAAGTACCCTTGACGGAGGAAAACGTTGAAAGCGTTTTGGACGAAATCAG
EV525385       --> GAAGTACCCTTGACGGAGGAAACCGTTGAAAGCGTTTTGGACGAAATCAG

               401    -    451
UN21374        --> ACCATACCTTATGTCTGATGGTGGGAATGTGGCATTGCATGAGATCGATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD552575       <-- ACCATACCTTATGTCTGATGGTGGGAATGTGGCATTGCATGAGATCGATG
FD529294       <-- ACCACACCTTATGTCTGATGGTGGGAATGTGGCATTGCATGAGATCGATG
FD982753       <-- ACCATACCTTATGTCTGATGGTGGGAATGTCGCATTGCATGAGATCGATG
FD555112       <-- ACCATACCTTATGTCTGATGGTGGGAATGTGGCATTGCATGAGATCGATG
EV530146       <-- ACCATACCTTATGTTTGATGGTGGGAATGTGGCATTGCATGAGATCGATG
FD532975       --> ACCACACCTTATGTCTGATGGTGGGAATGTGGCATTGCATGAGATCGATG
EX765808       --> ACCATACCTTATGTCTGATGGTGGGAATGTCGCATTGCATGAGATCGATG
EY947738       --> ACCATACCTTATGTCTGATGGTGGGAATGTCGCATTGCACGAGATCGATG
FD556235       --> ACCATACCTTATGTCTGATGGTGGGAATGTGGCATTGCATGAGATCGATG
FD559406       --> ACCATACCTTATGTCTGATGGTGGGAATGTGGCATTGCATGAGATCGATG
FD986512       --> ACCATACCTTATGTCTGATGGTGGGAATGTCGCATTGCATGAGATCGATG
EV525385       --> ACCATACCTTATGTCTGATGGTGGGAATGTGGCATTGCATGAGATCGATG

               451    -    501
UN21374        --> GCAATATTGTTCGAGTGAAACTGCAGGGAGCGTGTGGTTCATGCCCAAGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD552575       <-- GCAATATTGTTCGAGTGAAACTGCAGGGAGCGTGTGGTTCATGCCCAAGT
FD529294       <-- GCAATATTGTTCGAGTGAAACTGCAGGGAGCGTGTGGTTCATGCCCAAGT
FD982753       <-- GCAATATTGTTCGAGTGAAACTGCAGGGAGCCTGCGGTTCATGCCCAAGT
FD555112       <-- GCAATATTGTTCGAGTGAAACTGCAGGGAGCGTGTGGTTCATGCCCAAGT
EV530146       <-- GCAATATTGTTCGAGTGAAACTGCAGGGAGCGTGTGGTTCATGCCCAAGT
FD532975       --> GCAATATTGTTCGAGTGAAACTGCAGGGAGCGTGTGGTTCATGCCCAAGT
EX765808       --> GCAATATTGTTCGAGTGAAACTGCAGGGAGCGTGTGGTTCATGCCCAAGT
EY947738       --> GCAATATTGTTCGAGTGAAACTGCAGGGAGCGTGCGGTTCATGCCCAAGT
FD556235       --> GCAATATTGTTCGAGTGAAACTGCAGGGAGCGTGTGGTTCATGCCCAAGT
FD559406       --> GCAATATTGTTCGAGTGAAACTGCAGGGAGCGTGTGGTTCATGCCCAAGT
FD986512       --> GCAATATTGTTCGAGTGAAACTGCAGGGAGCCTGCGGTTCATGCCCAAGT
EV525385       --> GCAATATTGTTCGAGTGAAACTGCAGGGAGCGTGTGGTTCATGCCCAAGT

               501    -    551
UN21374        --> TCTGTTACGACGATGAAGATGGGTATTGAGCGTCGCCTCATGGAAAAGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD552575       <-- TCTGTTACGACGATGAAGATGGGTATTGAGCGTCGCCTCATGGAAAAGAT  Raphanus raphanistrum subsp. landra
FD529294       <-- TCTGTTACGACGATGAAGATGGGTATCGAGCGTCGCCTCATGGAAAAGAT  Raphanus raphanistrum subsp. maritimus
FD982753       <-- TCTGTTACGACGATGAAGATGGGTATTGAGCGTCGCCTCATAGAAAAGAT  Raphanus raphanistrum subsp. landra
FD555112       <-- TCTGTTACGACGATGAAGATGGGTATTGAGCGTCGCCTCATGGAAAAGAT  Raphanus raphanistrum subsp. landra
EV530146       <-- TTTGTTACGACGATGAAGATGGGTATCGAGCGTCGCCTCATGGAAAAGAT  Raphanus raphanistrum subsp. maritimus
FD532975       --> TCTGTTACGACGATGAAGATGGGTATCGAGCGTCGCCTCATGGAAAAGAT  Raphanus raphanistrum subsp. maritimus
EX765808       --> TCTGTTACGACGATGAAGATGGGTATTGAGCGTCGCCTCATGGAAAAGAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY947738       --> TCTGTTACGACGATGAAGATGGGTATTGAGCGTCGCCTCATGGAAAAGAT  Raphanus sativus cv Rat-Tail Radish #3870
FD556235       --> TCTGTTACGACGATGAAGATGGGTATTGAGCGTCGCCTCATGGAAAAGAT  Raphanus raphanistrum subsp. landra
FD559406       --> TCTGTTACGACGATGAAGATGGGTATTGAGCGTCGCCTCATGGAAAAGAT  Raphanus raphanistrum subsp. landra
FD986512       --> TCTGTTACGACGATGAAGATGGGTATTGAGCGTCGCCTCATAGAAAAGAT  Raphanus raphanistrum subsp. landra
EV525385       --> TCTGTTACGACGATGAAGATGGGTATCGAGCGTCGCCTCATGGAAAAGAT  Raphanus raphanistrum subsp. maritimus

               551    -    601
UN21374        --> CCCTGAAATAGTGGCTGTTGAATCAGTTGCAGATGAAGAGACTGGCCTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD552575       <-- CCCTGAAATAGTGGCTGTTGAATCAGTTGCAGATGAAGAGATTGGCCTTG
FD529294       <-- CCCTGAAATAGTGGCTGTTGAATCAGTTGCAGATGAAGAGACTGGCCTTG
FD982753       <-- CCCTGAAATAGTAGCTGTTGAATCAGTTGCAGATGAAGAGACTGGCCTTG
FD555112       <-- CCCTGAAATAGTGGCTGTTGAATCAGTTGCAGATGAAGAGATTGGCCTTG
EV530146       <-- CCCTGAAATAGTGGCTGTTGAATCAGTTGCAGATGAAGAGACTGGCCTTG
FD532975       --> CCCTGAAATAGTGGCTGTTGAATCAGTTGCAGATGAAGAGACTGGCCTTG
EX765808       --> CCCTGAAATAGTGGCTGTTGAATCAGTTCCAGATGAAGAGACTGGCCTTG
EY947738       --> CCCTGAAATAGTGGCTGTTGAATCAGTTGCAGATGAAGAGACTGGCCTTG
FD556235       --> CCCTGAAATAGTGGCTGTTGAATCAGTTGCAGATGAAGAGATTGGCCTTG
FD559406       --> CCCTGAAATAGTGGCTGTTGAATCAGTTGCAGATGAAGAGATTGGCCTTG
FD986512       --> CCCTGAAATAGTAGCTGTTGAATCAGTTGCAGATGAAGAGACTGGCCTTG
EV525385       --> CCCTGAAATAGTGGCTGTTGAATCAGTTGCAGATGAAGAGACTGGCCTTG

               601    -    651
UN21374        --> AACTCAATGACGAAAACATTGAAAAGGTGCTTGAAGAAATCAGGCCTTAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD552575       <-- AACTCAATGACGAAAACATTGAAAAGGTGCTTGAAGAAATCAGGCCTTAC
FD529294       <-- AACTCAATGACGAAAACATTGAAAAGGTGCTTGAAGAAATCAGGCCTTAC
FD982753       <-- AACTCAATGACGAAAACATTGAAAAGGTGCTTGAAGAAATCAGGCCTTAC
FD555112       <-- AACTCAATGACGAAAACATTGAAAAGGTGCTTGAAGAAATCAGGCCTTAC
EV530146       <-- AACTCAATGACGAAAACATTGAAAAGGTGCTTGAAGAAATCAGGCCTTAC
FD532975       --> AACTCAATGACGAAAACATTGAAAAGGTGCTTGAAGAAA...........
EX765808       --> AACTCAATGACGAAAACATTGAAAAGGTGCTGGAAGAAATCAGGCCTTAC
EY947738       --> AACTCAATGACGAAAACATTGAAAAGGTGCTTGAAGAAATCAGGCCTTAC
FD556235       --> AACTCAATGACGAAAACATTGAAAAGGTGCTTGAAGAAATCAGGCCTTAC
FD559406       --> AACTCAATGACGAAAACATTGAAAAGGTGCTTGAAGAAATCAGGCCTTAC
FD986512       --> AACTCAATGACGAAAACATTGAAAAGGTGCTTGAAGAAATCAGGCCTTAC
EV525385       --> AACTCAATGACGAAAACATTGAAAAGGTGCTTGAAGAAATCAGGCCTTAC

               651    -    701
UN21374        --> TTGATCGGAACAGCAGATGGATCCCTCGAACTGGTGGAGATTGAAGAACC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD552575       <-- TTGATCGGAACAGCAGATGGATCCCTCGAACTGGTGGAGATTGAAGAACC
FD529294       <-- TTGATCGGAACAGCAGATGGATCCCTCGAACTGGTGGAGATTGAAGAACC
FD982753       <-- TTGATCGGAACAGCAGATGGATCCCTCGAACTGGTGGAGATTGAAGAACC
FD555112       <-- TTGATCGGAACAGCAGATGGATCCCTCGAACTGGTGGAGATTGAAGAACC
EV530146       <-- TTGATCGGAACGGCAGATGGATCCCTCGAACTGGTGGAGATTGAAGAACC
FD532975       --> ..................................................
EX765808       --> TTGATCGGAACAGCTGATGGATCCCTCGAACTGGTGGAGATTGAAGAACC
EY947738       --> TTGATCGGAACAGCTGATGGATCTCTCGAACTGGTGGAGATTGAAGAACC
FD556235       --> TTGA..............................................
FD559406       --> TTGATCGGAACAGCAGATGGATCCCTCGAACTGGTGGAGATTGAAGAACC
FD986512       --> TTGATCGGAACAGCAGATGGATCCCTCGAACTGGTGGAGATTGAAGAACC
EV525385       --> TTGATCGGAACGGCAGATGGATCCCTCGAACTGGTGGAGATTGAAGAACC

               701    -    751
UN21374        --> GATTGTTAAGATAAGAATCACAGGACCTGCTGCTGGGGTCATGACCGTAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD552575       <-- GATCGTGAAGATAAGAATCACAGGACCTGCTGCTGGGGTCATGACCGTAC
FD529294       <-- GATTGTTAAGATAAGAATCACAGGACCTGCTGCTGGGGTCATGACCGTAC
FD982753       <-- GATTGTTAAGATAAGAATCACAGGACCTGCTGCTGGAGTCATGACCGTAC
FD555112       <-- GATCGTGAAGATAAGAATCACAGGACCTGCTGCTGGGGTCATGACCGTAC
EV530146       <-- GATTGTTAAGATAAGAATCACAGGACCTGCTGCTGGGGTCATGACCGTAC
FD532975       --> ..................................................
EX765808       --> GATTGTTAAGATAAGA-TCACAG-A-CTGCTGCTGGAGTCATGACCGTAC
EY947738       --> GATTGTTAAGATAAGA-TCACAG-ACCTGCTGCTGGTGTCATGACCGTAC
FD556235       --> ..................................................
FD559406       --> GATCGTGAAGATAAGAATCACAG-ACCTGCTGCTGGGGTCATGACCGTAC
FD986512       --> GATTGTTAAGATAAGAATCACAGGACCTGCTGCTGGAGTCATGACCGTAC
EV525385       --> GATTGTTAAGATAAGAATCACAGGACCTGCTGCTGGGGTCATGACCGTAC

               751    -    801
UN21374        --> GAGTGGCAGTAACTCAGAAACTCAGAGAGAAAATTCCTTCTATTGCAGCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD552575       <-- GAGTGGCAGTAACTCAGAAACTCAGAGAGAAAATTCCTTCTATTGCAGCT
FD529294       <-- GAGTGGCAGTAACTCAGAAACTCAGAGAGAAAATTCCTTCTATTGCAGCT
FD982753       <-- GAGTGGCAGTAACTCAGAAACTCAGAGAGAAAATTCCTTCTATTGCAGCT
FD555112       <-- GAGTGGCAGTAACTCAGAAACTCAGAGAGAAAATTCCTTCTATTGCAGCT
EV530146       <-- GAGTGGCAGTAACTCAGAAACTCAGAGAGAAAATTCCTTTTATTGCAGCT
FD532975       --> ..................................................
EX765808       --> GAGTGGCAGTA-CTCAGAA-CTCAGAGAGAAA..................
EY947738       --> GAGTGGCAGTA-CTCAGAA-CTCAGAGAGAAAtc................
FD556235       --> ..................................................
FD559406       --> GAGTGGCAGTAACTCAGAAACTCAGAGAGAAAATTCCTTCTATTGCAGCT
FD986512       --> GAGTGGCAGTAACTCAGAAACTCAGAGAGAAA-TTCCTTCTATTGCAGCT
EV525385       --> GAGTGGCAGTAACTCAGAAACTCAGAGAGAAAATTCCTTCTATTGCAGCT

               801    -    851
UN21374        --> GTTCAACTTATATGAACTCCTCTCTTTTTTTGTATAGTTACTATGTACAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD552575       <-- GTTCAACTTATATGAACTCCTCTCTTTTTT-GTATAGTTACTATGTACGT
FD529294       <-- GTTCAACTTATATGAACTCCTCTCTTTTTTTGTATAGTTACTATGTACAT
FD982753       <-- GTTCAACTTATATGAACTCGTCTCTTTCTTTGTATAGTTACTATGTACAG
FD555112       <-- GTTCAACTTATATGAACTCCTCTCTTTTTT-GTATAGTTACTATGTACGT
EV530146       <-- GTTCAACTTATATGAACTCCTCTCTTTTTTTGTATAGTTACTATGTACAT
FD532975       --> ..................................................
EX765808       --> ..................................................
EY947738       --> ..................................................
FD556235       --> ..................................................
FD559406       --> GTTCA-CTTATATGA...................................
FD986512       --> GTTCA-CTTATATGA-CTCGTCTCTTTctt....................
EV525385       --> GTTCAACTTATATGAACTCCTCTCTTTTTTTGTATAGTTACTATGTACAT

               851    -    901
UN21374        --> ATACTGTGTTTGACATTTGTTATTTGTGCCCAAATAATTAATTTTGTTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD552575       <-- ATACTGTGTTTGACATTTGTTATTTGTGCCCAAATAATTAA.........
FD529294       <-- ATACTGTGTTTGACATTTGTTATTTGTGCCCAAATAATTAA.........
FD982753       <-- ATACTGTGTTTGACATTTGTTTTTTGTGCCCAAATAATTAATTTTGTTTT
FD555112       <-- ATACTGTGTTTGACATTTGTTATTTGTGCCCAAATAATTAA.........
EV530146       <-- ATACTGTGTTTGACATTTGTTATTTGTGCCCAAATAATTAA.........
FD532975       --> ..................................................
EX765808       --> ..................................................
EY947738       --> ..................................................
FD556235       --> ..................................................
FD559406       --> ..................................................
FD986512       --> ..................................................
EV525385       --> ATACTGTGTTTGACATTTGTTATTTGTGCCCAAATAATTAATTTTGTgta

               901    -    951
UN21374        --> ATTTT
                   ~~~~~
FD552575       <-- .....
FD529294       <-- .....
FD982753       <-- ATTTT
FD555112       <-- .....
EV530146       <-- .....
FD532975       --> .....
EX765808       --> .....
EY947738       --> .....
FD556235       --> .....
FD559406       --> .....
FD986512       --> .....
EV525385       --> ttc..