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Alignment for radish unigene UN21416

               1      -     51
UN21416        --> GAACAAATTCAAATAAGATGGATATAATCAAGAAGAATCCGTTACACTCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD560499       <-- ..................................................
FD988070       <-- ..................................................
EV537349       <-- ..................................................
FD540338       <-- ..................................................
FD536860       --> GAACAAATTCAAATAAGATGGATATAATCAAGAAGAATCCGTTACACTCC
EX766488       --> .........CAAATAAGATGGATATAATCAAGAAGAATCCGTTACACTCC
EX899028       --> ..................................................
EX753324       --> ..................................................
FD960900       --> ..................................................
EV541597       --> ..................................................

               51     -    101
UN21416        --> AATGTTATCACATTAGCCATATGATTAAGCATGGGAAGCTTTGACATATA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD560499       <-- ..................................................
FD988070       <-- ..................................................
EV537349       <-- ..................................................
FD540338       <-- ..................................................
FD536860       --> AATGTTATCACATTAGCCATATGATTAAGCATGGGAAGCTTTGACATATA
EX766488       --> AAAGTTATCACATTAGCCATATGATTAAGCATGGGAAGCTTTGACATATA
EX899028       --> ..................................................
EX753324       --> ..................................................
FD960900       --> ..................................................
EV541597       --> ..................................................

               101    -    151
UN21416        --> GCAAAACTATAACAGACATTATTGGCTCAATAGCCTCGGATGATAAATTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD560499       <-- ..................................................
FD988070       <-- ..................................................
EV537349       <-- ..................................................
FD540338       <-- ..................................................
FD536860       --> GCAAAACTATAACAGACATTATTGGCTCAATAGCCTCGGATGATAAATTT
EX766488       --> GCAAAACTATAACAGACATTATTGGCTCAATAGCCTCGGATGATAAATTT
EX899028       --> ..........AACAGACATTATTGGCTCAATAGCCTCGGATGATAAATTT
EX753324       --> .........................................GATAAATTT
FD960900       --> .........................................GATAAATTT
EV541597       --> .........................................ggTAAATTT

               151    -    201
UN21416        --> TAAGAGCTCCCACTACTTGCAAATACATCGCATATTCATTACATCACATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD560499       <-- ..................................................
FD988070       <-- ..................................................
EV537349       <-- ..................................................
FD540338       <-- ..................................................
FD536860       --> TAAGAGCTCCCACTACTTGCAAATACATCGCATATTCATTACATCACATG
EX766488       --> TAAGAGCTCCCACTACTTGCAAATACATCGCATATTCATTACATCACATG
EX899028       --> TAAGAGCTCCCACTACTTGCAAATACATCGCATATTCATTACATCACATG
EX753324       --> TAAGAGCTCCCACTACTTGCAAATACATCGCATATTCATTACATCACATG
FD960900       --> TAAGAGCTCCCACTACTTGCAAATACATCGCATATTCATTACATCACATG
EV541597       --> TAAGAGCTCCCACTACTTGCAAATACATCGCATATTCATTACATCACATG

               201    -    251
UN21416        --> ATTCTCAGTCAGAGAAACACTTCACAACAACTAATCCAAACGCACCAAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD560499       <-- ..................................................
FD988070       <-- ..................................................
EV537349       <-- ..................................................
FD540338       <-- ..................................................
FD536860       --> ATTCTCAGTCAGAGAAACACTTCACAACAACTAATCCAAACGCACCAAAC
EX766488       --> ATTCTCAGTCAGAGAAACACTTCACAACAACTAATCCAAACGCACCAAAC
EX899028       --> ATTCTCAGTCAGAGAAACACTTCACAACAACTAATCCAAACGCACCAAAC
EX753324       --> ATTCTCAGTCAGAGAAACACTTCACAACAACTAATCCAAACGCACCAAAC
FD960900       --> ATTCTCAGTCAGAAAAACACTTCACAACAACTAATCCAAACGCACCAAAC
EV541597       --> ATTCTCAGTCAGAGAAACACTTCACAACAACTAATCCAAACGCACCAAAC

               251    -    301
UN21416        --> CTCTTTTCAGTTTTACATTTGAACCAAAGACAAGAGACAATACAAACAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD560499       <-- ..................................................
FD988070       <-- ..................................................
EV537349       <-- ..................................................
FD540338       <-- ..................................................
FD536860       --> CTCTTTTCAGTTTTACATTTGAACCAAAGACAAGAGACAATACAAACAAA
EX766488       --> CTCTTTTCAGTTTTACATTTGAACCAAAGACAAGAGACAATACAAACAAA
EX899028       --> CTCTTTTCAGTTTTACATTTGAACCAAAGACAAGAGACAATACAAACAAA
EX753324       --> CTCTTTTCAGTTTTACATTTGAACCAAAGACAAGAGACAATACAAACAAA
FD960900       --> CTCTTTTCAGTTTTACATTTGAACCAAAGACAAGGGACAATA-AAACAAA
EV541597       --> CTCTTTTCAGTTTTACATTTGAACCAAAGACAAGAGACAATACAAACAAA

               301    -    351
UN21416        --> CATGCATCAATATTCCTGTTTATGCTTCAACACGGATCCCTTTACTAGGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD560499       <-- ..................................................  Raphanus sativus var. oleiformis
FD988070       <-- ..................................................  Raphanus raphanistrum subsp. landra
EV537349       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD540338       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD536860       --> CATGCATCAATATGCCTGTTCATGCTTCAACACGGAGCCCTTTACTAGGC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX766488       --> CATGCATCAATATGCCTGTTCATGCTTCAACACGGAGCCCTTTACTAGGC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX899028       --> CATGCATCAATATTCCTGTTTATGCTTCAACAAGGATCCCTTTACTAGGC  Raphanus sativus cv Early Scarlet Globe
EX753324       --> CATGCATCAATATTCCTGTTTATGCTTCAACAAGGATCCCTTTACTAGGC  Raphanus raphanistrum subsp. maritimus
FD960900       --> CATGCATCAATATTCCTGTTTATGCTTCAACAAGGATCCCTTTACTAGGC  Raphanus raphanistrum subsp. maritimus
EV541597       --> CATGCATCAATATGCCTGTTCATGCTTCAACACGGAGCCCTTTACTAGGC  Raphanus raphanistrum subsp. raphanistrum (MS)

               351    -    401
UN21416        --> TTTCTTCTGTGAAGCTGCCGATTTAATGGCTGATTTTGCAAGAGAGGAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD560499       <-- ..................................................  Raphanus sativus var. oleiformis
FD988070       <-- ..................................................  Raphanus raphanistrum subsp. landra
EV537349       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD540338       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD536860       --> TTTCTTCTGTGAAACTGCCGACTAAATGGTTGATTTTGCAAGAGAGGAAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX766488       --> TTTCTTCTGTGAAACTGCCGACTTAATGGCTGATTTTGCAAGAGAGGAAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX899028       --> TTTCTTCTGTGAAGCTGCCGATTTAATGGCTGATTTTGCAAGAGAGGAAG  Raphanus sativus cv Early Scarlet Globe
EX753324       --> TTTCTTCTGTGAAGCTGCCGATTTAATGGCTGATTTTGCAAGAGAGGAAG  Raphanus raphanistrum subsp. maritimus
FD960900       --> TTTCTTCTGTGAAGCTGCCGATTTAATGGCTGATTTTGCAAGAAAGGAAG  Raphanus raphanistrum subsp. maritimus
EV541597       --> TTTCTTCTGTGAAACTGCCGACTTAATGGTTGATTTTGCAAGAGAGGAAG  Raphanus raphanistrum subsp. raphanistrum (MS)

               401    -    451
UN21416        --> GTTTGAGAACGCTCTTAGGGTTAATAGCCTTTCTGATTTTGAAAGCAGCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD560499       <-- .....................TAATAGCCTTTCTGATTTTGAAAGCAGCC  Raphanus sativus var. oleiformis
FD988070       <-- ..............................TTCTGATTTTGAAAGCAGCC  Raphanus raphanistrum subsp. landra
EV537349       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD540338       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD536860       --> GTTTGAGAACGCTCTTAGGGTTAATAGCCTTTCTGATTTTGAAAGCAGCC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX766488       --> GTTTGAGAACGCTCTTAGGGTTAATAGCCTTTCTGATTTTGAAAGCAGCC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX899028       --> GTTTGAGAACGCTCTTAGGATTAATAGCCTTTCTGATTTTGAAAGCAGCC  Raphanus sativus cv Early Scarlet Globe
EX753324       --> GTTTGAGAACGCTCTTAGGATTAATAGCCTTTCTGATTTTGAAAGCAGCC  Raphanus raphanistrum subsp. maritimus
FD960900       --> GTTTGAAAACGCTCTTAGGATTAATAGCCTTTCTGATTTTGAAAGCAGCC  Raphanus raphanistrum subsp. maritimus
EV541597       --> GTTTGAGAACGCTCTTAGGGTTAATAGCCTTTCTGATTTTGAAAGCAGCC  Raphanus raphanistrum subsp. raphanistrum (MS)

               451    -    501
UN21416        --> CAGGCTGTCCCAAAAGCATGTCCCACTGCGTCTAGCCCTTCGTTTGTCGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD560499       <-- CAGGCTGTCCCAAAAGCATGTCCCACTGCCTCTAGCCCTTCGTTTGTCGC  Raphanus sativus var. oleiformis
FD988070       <-- CAGGCTGTCCCAAAAGCATGTCCCACTGCGTCTAGCCCTTCGTTTGTCGC  Raphanus raphanistrum subsp. landra
EV537349       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD540338       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD536860       --> CAGGCTGTCCCAAAAGCATGTCCCACTGCCTCTAGCCCTTCGTTTGTCGC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX766488       --> CAGGCTGTCCCAAAAGCATGTCCCACTGCCTCTAGCCCTTCGTTTGTCGC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX899028       --> CAGGCTGTCCCAAAAGCATGTCCCACTGCGTCTAGCCCTTCGTTTGTCGC  Raphanus sativus cv Early Scarlet Globe
EX753324       --> CAGGCTGTCCCAAAAGCATGTCCCACTGCGTCTAGCCCTTCGTTTGTCGC  Raphanus raphanistrum subsp. maritimus
FD960900       --> CAGGCTGTCCCAAAAGCATGTCCCACTGCGTCTAGCCCTTCGTTTGTCGC  Raphanus raphanistrum subsp. maritimus
EV541597       --> CAGGCTGTCCCAAAAGCATGTCCCACTGCCTCTAGCCCTTCGTTTGTCGC  Raphanus raphanistrum subsp. raphanistrum (MS)

               501    -    551
UN21416        --> CTCTGCCGCTTTACCACCATGCCTGTGATCAACAAGTTCGGTTGCAACGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD560499       <-- CTCTGCCGCTTTACCACCATGCCTGTGATCAACAAGTTCGGTTGCAACGG
FD988070       <-- CTCTGCCGCTTTACCACCATGCCTGTGATCAACAAGTTCGGTTGCAACGG
EV537349       <-- ........................................GTTGCAACGG
FD540338       <-- ..................................................
FD536860       --> CTCTGCCGCTTTACCACCATGCCTGTGATCAACAAGTTCGGTTGCAACGG
EX766488       --> CTCTGCCGCTTTACCACCATGCCTGTGATCAACAAGTTCGGTTGCAACGG
EX899028       --> CTCTGCCGCTTTACCACCATGCCTGTGATCAACAAGTTCGGTTGCAACGG
EX753324       --> CTCTGCCGCTTTACCACCATGCCTGTGATCAACAAGTTCGGTTGCAACGG
FD960900       --> CTCTGCCGCTTTACCACCATGCCTGTGATCAACAAGTTCGGTTGCAACGG
EV541597       --> CTCTGCCGCTTTACCACCATGCCTGTGATCAACAAGTTTGGTTGCAACGG

               551    -    601
UN21416        --> TGGACGAGGTTGACATCACGTTCCTTCCAGCTACTTCAACAGCGTCACAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD560499       <-- TGGACGAGGTTGACATCACGTTCCTTCCAGCTACTTCAACAGCGTCACAG
FD988070       <-- TGGACGAGGTTGACATCACGTTCCTTCCAGCTACTTCAACAGCGTCACAG
EV537349       <-- TGGACGAGGTTGACATCACGTTCCTTCCAGCTACTTCAACAGCGTCACAG
FD540338       <-- ..................................................
FD536860       --> TGGACGAGGTTGACATCACGTTCCTTCCAGCTACCTCAACAGCGTCACAG
EX766488       --> TGGACGAGGTTGACATCACGTTCCTGCCAGCTACTTCAACAGCGTCACAG
EX899028       --> TGGACGAGGTTGACATCACGTTCCTTCCAGCTACTTCAACAGCGTCACAG
EX753324       --> TGGACGAGGTTGACATCACGTTCCTTCCAGCTACTTCAACAGCGTCACAG
FD960900       --> TGGACGAGGTTGACATCACGTTCCTTCCAGCTACTTCAACAGCGTCACAA
EV541597       --> TGGACGAGGTTGACATCACGTTCCTTCCAGCTACTTCAACAGCGTCACAG

               601    -    651
UN21416        --> ACCTTATTGAAACCGTCAAGAGTTGCAAGGACGATTTCTCCAGGGAGAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD560499       <-- ACCTTATTGAAACCGTCAAGAGTTGCAAGGACGATTTCTCCAGGGAGAAG
FD988070       <-- ACCTTATTGAAACCGTCAAGAGTTGCAAGGACGATTTCTCCAGGGAGAAG
EV537349       <-- ACCTCGTTGAAACCGTCAAGAGTTGCAAGGACGATTTCTCCAGGGAGAAG
FD540338       <-- ..................................................
FD536860       --> ACCTTGTTGAAACCGTCAAGAGTTGCAAGGACGATTTCTCCAGGGAGAAG
EX766488       --> ACCTTATTGAAACCGTCAAGAGTTGCAAGGACGATTTCTCCAGGGAGAAG
EX899028       --> ACCTTATTGAAACCGTCAAGAGTTGCAAGGACGATTTCTCCAGGGAGAAG
EX753324       --> ACCTTATTGAAACCGTCAAGAGTTGCAAGGACGATTTCTCCAGGGAGAAG
FD960900       --> ACCTTATTGAAACCGTCAAGAGTTGCAAGGACGATTTCTCCAGGGAGAAG
EV541597       --> ACCTCGTTGAAACCGTCAAGAGTTGCAAGGACGATTTCTCCAGGGAGAAG

               651    -    701
UN21416        --> GCTAAAGAATTTCTTTCCTACTTTGGTGTTTGCAACTGAACTTGTGAAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD560499       <-- GCTAAAGAATTTCTTTCCTGCTTTGGTGTTTGCAACTGAACTTGTGAAGA
FD988070       <-- GCTAAAGAATTTCTTTCCTGCTTTGGTGTTTGCAACTGAACTTGTGAAGA
EV537349       <-- GCT...............................................
FD540338       <-- ..................................................
FD536860       --> GCTAAAAAATTTCTTTCCTACTTTGGTGTTTGCAACTGAACTTGTGAAGA
EX766488       --> GCTAAAGAATTTCTTTCCTACTTTGGTGTTTGCAACTGAACTTGTGAAGA
EX899028       --> GCTAAAGAATTTCTTTCCTACTTTGGTGTTTGCAACTGAACTTGTGAAGA
EX753324       --> GCTAAAGAATTTCTTTCCTACTTTGGTGTTTGCAACTGAACTTGTGAAGA
FD960900       --> GCTAAAGAATTTCTTTCCTACTTTGGTGTTTGCAACT-AACTTGTGATGA
EV541597       --> GCTAAAAAATTTCTTTCCTACTTTGGTGTTTGCAACTGAACTTGTGAAGA

               701    -    751
UN21416        --> AGCCTGAAACTTTAATTACTCCAGACAGAACACCGTTTGCCACACTTTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD560499       <-- AGCCTGAAACTTTAATTACTCC............................
FD988070       <-- AGCCTGAAACTTTAATTAATCCAGACAGAACACCGTTTGCCACACTTTCT
EV537349       <-- ..................................................
FD540338       <-- ..........................AGAACACCGTTTGCCACACTTTCT
FD536860       --> AGCCTGAAACTTTAATTACTCCAGACAGAACACCGTTTGCCACACTTTCT
EX766488       --> AGCCTGAAACTTTAATTACTCCAGACAGAACACCGTTTGCCACACTct..
EX899028       --> AGCCTGAAACTTTAATTACTCCAGACAGAACACCGTTTGCCACACTCTCT
EX753324       --> AGCCTGAAACTTTAATTACTCCAGACAGAACACCGTTTGCCACACTCTCT
FD960900       --> AGCCTGAAACTTTAATTACTCC............................
EV541597       --> AGCCTGAAACTTTAATTACTCCAGACAGAACACCGTTTGCCACACTTTCT

               751    -    801
UN21416        --> GTCATCTTGGTCATCTTCTTCACTCTCTTGATCCTTTTCAAGGTATCAGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD560499       <-- ..................................................
FD988070       <-- GTCATCTTGGTCATCTTCTTCACTCTCTTGATTCTTTTCAAGGTGTCAGG
EV537349       <-- ..................................................
FD540338       <-- GTCATCTTGGTCATCTTCTTCACTCTCTTGATCCTTTTCAAGGTATCAGG
FD536860       --> GTCATCTTGGTCATCTTCTTCACTCTCTTGATCCTTTT............
EX766488       --> ..................................................
EX899028       --> GTCATCTTGGTCATCTTCTTCACTCTC.......................
EX753324       --> GTCATCTTGGTCATCTTCTTCACTCTCTTGATTCTTTTCAAGGTATCA..
FD960900       --> ..................................................
EV541597       --> GTCATCTTGGTCATCTTCTTCACTCTCTTGATCCTTTTCAAGGTATCAGG

               801    -    851
UN21416        --> ATGAACATCCCTCTCCTTCTCAGCCTTACTCAACCTCCGTTTCATGAAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD560499       <-- ..................................................
FD988070       <-- ATGAACATCCCTCTCCTTCTCAGCCTTGCTCAACCTCCGTTTCATGAAGT
EV537349       <-- ..................................................
FD540338       <-- ATGAACATCCCTCTCCTTCTCAGCCTTACTCAACCTCCGTTTCATGAAAT
FD536860       --> ..................................................
EX766488       --> ..................................................
EX899028       --> ..................................................
EX753324       --> ..................................................
FD960900       --> ..................................................
EV541597       --> ATGAACATCCCTCTCCTTCTCAGCCTTACTCAACCTCCGTTTCATGAAAT

               851    -    901
UN21416        --> CATTCCCCCAGTTGAGCCTATCCATAGTCACATCACCACACCATAGAATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD560499       <-- ..................................................
FD988070       <-- CATTCCCCCAGTTGAGCCTATCCATAGTCACATCACCACACCATAGAATC
EV537349       <-- ..................................................
FD540338       <-- CATTCCCCCAGTTGAGCCTATCCATAGTCACATCACCACACCATAGAATC
FD536860       --> ..................................................
EX766488       --> ..................................................
EX899028       --> ..................................................
EX753324       --> ..................................................
FD960900       --> ..................................................
EV541597       --> CATTCCCCCAGTTGAGCCTATCCATAGTCACATCACCACACCATccccg.

               901    -    951
UN21416        --> CCTTTGATCAGATGCCCGGAGCCACTAGCTATCAGCTTCGCCGTCTTCCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD560499       <-- ..................................................
FD988070       <-- CCTTTGATCAGATGCCCGGAGCCACTAGCTATCAGCTTCGCCGTCTTCCC
EV537349       <-- ..................................................
FD540338       <-- CCTTTGATCAGATGCCCCGAGCCACTAGCTATCAGCTTCGCCGTCTTCCC
FD536860       --> ..................................................
EX766488       --> ..................................................
EX899028       --> ..................................................
EX753324       --> ..................................................
FD960900       --> ..................................................
EV541597       --> ..................................................

               951    -   1001
UN21416        --> ACTGTAATCCTCTACATTTGGAGCTAAAGTCGTCCAATAAGCAGCACACT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD560499       <-- ..................................................
FD988070       <-- ACTGTAATCCTCTACATTTGGAGCTAAAGTCGTCCAATACACAGCACACT
EV537349       <-- ..................................................
FD540338       <-- ACTATAATCCTCCACATTTGGAGCTAAAGTCGTCCAATAAGCAGCACACT
FD536860       --> ..................................................
EX766488       --> ..................................................
EX899028       --> ..................................................
EX753324       --> ..................................................
FD960900       --> ..................................................
EV541597       --> ..................................................

               1001   -   1051
UN21416        --> GCTTCTCCACAACCTCTTTCCTCTCTCCAGTAAGCTCCACTGGAGACGTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD560499       <-- ..................................................
FD988070       <-- GCTTCTCCACAACCTCTTTCCTCTCTCCAGTAAGCTCCACCGGAGACGTC
EV537349       <-- ..................................................
FD540338       <-- GCTTCTCCACAACCTCTTTCCTCTCTCCAGTAAGCTCCACTGGAGAAGTC
FD536860       --> ..................................................
EX766488       --> ..................................................
EX899028       --> ..................................................
EX753324       --> ..................................................
FD960900       --> ..................................................
EV541597       --> ..................................................

               1051   -   1101
UN21416        --> TCTCTCGCCACCGTCACATCCAAAATCTTTTCCCCTGTTTCCTTCGCTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD560499       <-- ..................................................
FD988070       <-- TCTCTCGCCACCGTCACATCCAAAATCTCTTCCCCTc.............
EV537349       <-- ..................................................
FD540338       <-- TCCCTCGCCACCGCCACATCCAAAACCTTTTCCCCTGTTTCCTTCGCTTC
FD536860       --> ..................................................
EX766488       --> ..................................................
EX899028       --> ..................................................
EX753324       --> ..................................................
FD960900       --> ..................................................
EV541597       --> ..................................................

               1101   -   1151
UN21416        --> CTCCGACACTTTCTGAACCGTGAAACAGCTGTAGTGATCCAAGAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD560499       <-- .............................................
FD988070       <-- .............................................
EV537349       <-- .............................................
FD540338       <-- CTCCGACACTTTCTGAACCGTGAAACAGCTGTAGTGATCCAAGAC
FD536860       --> .............................................
EX766488       --> .............................................
EX899028       --> .............................................
EX753324       --> .............................................
FD960900       --> .............................................
EV541597       --> .............................................