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Alignment for radish unigene UN21431

               1      -     51
UN21431        --> GCAAGAGGGACAGGAATCGGTGGAGGGAATGATGAGAGGGAACAGACTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW728580       <-- ..................................................
EW719802       <-- ..................................................
EW728724       <-- ..................................................
EY920904       <-- ..................................................
EV532500       <-- ..................................................
FD961121       <-- ..................................................
FY449092       --> GCAAGAGGGACAGGAATCGGTGGAGGGAATGATGAGAGGGAACAGACTTT
EW724527       --> ..................................................
EY940046       --> ..................................................
EW715029       --> ..................................................
EV566015       --> ..................................................
EW723534       --> ..................................................
FD941717       --> ..................................................

               51     -    101
UN21431        --> GAACCAGTTGCTAACTGAGATGGATGGGTTTGAAGGTAACACTGGTATCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW728580       <-- ..................................................
EW719802       <-- ..................................................
EW728724       <-- ..................................................
EY920904       <-- ..................................................
EV532500       <-- ..................................................
FD961121       <-- ..................................................
FY449092       --> GAACCAGTTGCTAACTGAGATGGATGGGTTTGAAGGTAACACTGGTATCA
EW724527       --> ..................................................
EY940046       --> ..................................................
EW715029       --> ..................................................
EV566015       --> ..................................................
EW723534       --> ..................................................
FD941717       --> ..................................................

               101    -    151
UN21431        --> TCGTTGTTGCTGCAACCAATAGAGCAGACATTCTTGACTCTGCTTTGTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW728580       <-- ..................................................
EW719802       <-- ..................................................
EW728724       <-- ..................................................
EY920904       <-- ..................................................
EV532500       <-- ..................................................
FD961121       <-- ..................................................
FY449092       --> TCGTTGTTGCTGCAACCAATAGAGCAGACATTCTTGACTCTGCTTTGTTG
EW724527       --> ..................................gGACTCTGCTTTGTTG
EY940046       --> ..................................................
EW715029       --> ..................................................
EV566015       --> ..................................................
EW723534       --> ..................................................
FD941717       --> ..................................................

               151    -    201
UN21431        --> AGGCCAGGACGGTTTGATCGGCAGGTAAGTGTTGACGTTCCGGACATCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW728580       <-- ..................................................
EW719802       <-- ..................................................
EW728724       <-- ..................................................
EY920904       <-- ..................................................
EV532500       <-- ..................................................
FD961121       <-- ..................................................
FY449092       --> AGGCCAGGACGGTTTGATCGGCAGGTAAGTGTTGACGTTCCGGACATCAA
EW724527       --> AGGCCAGGACGGTTTGACCGGCAGGTAAGTGTTGACGTTCCAGACATCAA
EY940046       --> ..................................................
EW715029       --> ..................................................
EV566015       --> ..................................................
EW723534       --> ..................................................
FD941717       --> ..................................................

               201    -    251
UN21431        --> GGGGAGAACAGATATCCTCAAGGTTCATGCTGGTAATAAGAAGTTTGAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW728580       <-- ..................................................
EW719802       <-- ..................................................
EW728724       <-- ..................................................
EY920904       <-- ..................................................
EV532500       <-- ..................................................
FD961121       <-- ..................................................
FY449092       --> GGGGAGAACAGATATCCTCAAGGTTCATGCTGGTAATAAGAAGTTTGAAA
EW724527       --> GGGGAGAACAGATATCCTCAAGGTTCATGCTGGTAATAAGAAGTTTGAAA
EY940046       --> GGGGAGAACAGATATCCTCAAGGTTCATGCTGGCAATAAGAAGTTTGAAA
EW715029       --> ...GAGAACAGATATCCTCAAGGTTCATGCTGGTAATAAGAAGTTTGAAA
EV566015       --> ..................................................
EW723534       --> ..................................................
FD941717       --> ..................................................

               251    -    301
UN21431        --> ATGACGTCTCGCTTGAAGTGATAGCAATGAGAACACCTGGATTTAGCGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW728580       <-- ..................................................
EW719802       <-- ..................................................
EW728724       <-- ..................................................
EY920904       <-- ..................................................
EV532500       <-- ..................................................
FD961121       <-- ..................................................
FY449092       --> ATGACGTCTCGCTTGAAGTGATAGCAATGAGAACACCTGGATTTAGCGGA
EW724527       --> ATGACGTCTCGCTTGAAGTGATAGCAATGAGAACACCTGGATTTAGCGGA
EY940046       --> ATGACGTCTCGCTTGAAGTGATAGCAATGAGAACACCTGGATTTAGCGGA
EW715029       --> ATGACGTCTCGCTTGAAGTGATAGCAATGAGAACACCTGGATTTAGCGGA
EV566015       --> ..................................................
EW723534       --> ..................................................
FD941717       --> ..................................................

               301    -    351
UN21431        --> GCAGATCTTGCTAACCTCTTGAATGAAGCTGCTATATTGGCTGGACGACG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW728580       <-- ..........................................GGACGACG
EW719802       <-- ..................................................
EW728724       <-- ..................................................
EY920904       <-- ..................................................
EV532500       <-- ..................................................
FD961121       <-- ..................................................
FY449092       --> GCAGATCTTGCTAACCTCTTGAATGAAGCTGCTATATTGGCTGGACGACG
EW724527       --> GCAGATCTTACTAACCTGTTGAATGAGGCTGCCATATTGGCTGGACGACG
EY940046       --> GCAGATCTTGCTAACCTCTTGAATGAAGCTGCTATATTGGCTGGACGACG
EW715029       --> GCAGATCTTGCTAACCTCTTGAATGAAGCTGCTATATTGGCTGGACGACG
EV566015       --> ..................................................
EW723534       --> ..................................................
FD941717       --> ..................................................

               351    -    401
UN21431        --> TGCAAAGACGGCGATATCATCGAAAGAGATTGATGACTCTATTGACAGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW728580       <-- TGCGAAGACAGCGATATCATCGAAAGAGATTGATGACTCCATTGACAGAA
EW719802       <-- ..............TATCATCGAAAGAGATTGATGACTCTATTGACAGAA
EW728724       <-- ..................................................
EY920904       <-- ..................................................
EV532500       <-- ..................................................
FD961121       <-- ..................................................
FY449092       --> TGCAAAGACGGCGATATCATCGAAAGAGATTGATGACTCTATTGACAGAA
EW724527       --> TGCGAAGACAGCGATATCATCGAAAGAGATTGATGACTCCATTGACAGAA
EY940046       --> TGCAAAGACGGCGATATCATCGAAAGAGATTGATGACTCTATTGACAGAA
EW715029       --> TGCAAAGACGGCGATATCATCGAAAGAGATTGATGACTCTATTGACAGAA
EV566015       --> ..........................................gGACAGAA
EW723534       --> ..................................................
FD941717       --> ..................................................

               401    -    451
UN21431        --> TCGTTGCTGGTATGGAAGGAACTGTGATGACTGATAGCAAGAGCAAAAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW728580       <-- TCGTTGCTGGCATGGAAGGAACTGTGATGACTGATAGCAAGAGCAAGAGC
EW719802       <-- TCGTTGCTGGTATGGAAGGAACTGTGATGACTGATAGCAAGAGCAAAAGC
EW728724       <-- ...................gACTGTGATGACTGATAGCAAGAGCAAAAGC
EY920904       <-- ..................................................
EV532500       <-- ..................................................
FD961121       <-- ..................................................
FY449092       --> TCGTTGCTGGTATGGAAGGAACTGTGATGACTGATAGCAAGAGCAAAAGC
EW724527       --> TCGTTGCTGGCATGGAAGGAACTGTGATGACTGATAGCAAGAGCAAGAGC
EY940046       --> TCGTTGCTGGTATGGAAGGAACTGTGATGACTGATAGCAAGAGCAAAAGC
EW715029       --> TCGTTGCTGGTATGGAAGGAACTGTGATGACTGATAGCAAGAGCAAAAGC
EV566015       --> TCGTTGCTGGCATGGAAGGAACTGTGATGACTGATAGCAAGGGCAAAAGC
EW723534       --> ..................................................
FD941717       --> ..................................................

               451    -    501
UN21431        --> TTGGTTGCTTACCATGAAGTTGGTCATGCCGTGTGTGGAACATTGACTCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW728580       <-- TTGGTTGCTTACCATGAAGTTGGTCATGCCGTTTGTGGAACATTGACTCC
EW719802       <-- TTGGTTGCTTACCATGAAGTTGGTCGTGCCGTGTGTGGAACATTGACTCC
EW728724       <-- TTGGTTGCTTACCATGAAGTTGGTCATGCCGTGTGTGGAACATTGACTCC
EY920904       <-- ..................................................
EV532500       <-- ..................................................
FD961121       <-- ..................................................
FY449092       --> TTGGTTGCTTACCATGAAGTTGGTCATGCCGTGTGTGGAACATTGACTCC
EW724527       --> TTGGTTGCTTACCATGAAGTTGGTCATGCCGTTTGTGGAACATTGACTCC
EY940046       --> TTGGTTGCTTACCATGAAGTTGGTCATGCCGTGTGTGGAACATTGACTCC
EW715029       --> TTGGTTGCTTACCATGAAGTTGGTCGTGCCGTGTGTGGAACATTGACTCC
EV566015       --> TTGGTTGCTTACCATGAAGTTGGTCATGCCGTGTGTGGAGCATTGACTCC
EW723534       --> ........TTACCATGAAGTTGGTCATGCCGTGTGTGGAACATTGACTCC
FD941717       --> ..................................................

               501    -    551
UN21431        --> AGGACATGACGCTGTGCAAAAGGTAACGTTGGTACCAAGAGGACAAGCGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW728580       <-- AGGACATGACGCTGTGCAAAAGGTAACGTTGGTACCGAGAGGACAAGCGA
EW719802       <-- AGGACATGACGCTGTGCAAAAGGTAACGTTGGTACCAAGAGGACAAGCGA
EW728724       <-- AGGACATGACGCTGTGCAAAAGGCAACGTTGGTACCAAGAGGACAAGCGA
EY920904       <-- ..................................................
EV532500       <-- ..................................................
FD961121       <-- ..................................................
FY449092       --> AGGACATGACGCTGTGCAAAAGGTAACGTTGGTACCAAGAGGACAAGCGA
EW724527       --> AGGACATGACGCTGTGCAAAAGGTAACGTTGGTACCGAGAGGACAAGCGA
EY940046       --> AGGACATGACGCTGTGCAAAAGGTAACGTTGGTACCAAGAGGACAAGCGA
EW715029       --> AGGACATGACGCTGTGCAAAAGGTAACGTTGGTACCAAGAGGACAAGCGA
EV566015       --> AGGACATGACGCTGTGCAAAGGGTAACGTTGGTACCAAGAGGACAAGCGA
EW723534       --> AGGACATGACGCTGTGCAAAAGGCAACGTTGGTACCAAGAGGACAAGCGA
FD941717       --> ..................................................

               551    -    601
UN21431        --> GAGGTCTGACTTGGTTCATTCCATCAGATGACCCTACTCTCATCTCCAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW728580       <-- GAGGTCTGACTTGGTTCATTCCATCAGATGACCCTACTCTCATCTCCAAG
EW719802       <-- GAGGTCTGACTTGGTTCATTCCATCAGATGACCCTACTCTCATCTCCAAG
EW728724       <-- GAGGTCTGACTTGGTTCATTCCATCAGATGACCCTACTCTCATCTCCAAG
EY920904       <-- ..................................................
EV532500       <-- ..................................................
FD961121       <-- ..................................................
FY449092       --> GAGGTCTGACTTGGTTCATTCCATCAGATGACCCTACTCTCATCTCCAAG
EW724527       --> GAGGTCTGACTTGGTTCATTCCATCAGATGACCCTACTCTCATCTCCAAG
EY940046       --> GAGGTCTGACTTGGTTCATTCCATCAGATGACCCTACTCTCATCTCCAAG
EW715029       --> GAGGTCTGACTTGGTTCATTCCATCAGATGACCCTACTCTCATCTCCAAG
EV566015       --> GAGGTCTGACCTGATTCATTCCATCAGATGACCCTACTCTCATCTCCAAG
EW723534       --> GAGGTCTGACTTGGTTCATTCCATCAGATGACCCTACTCTCATCTCCAAG
FD941717       --> ..................................................

               601    -    651
UN21431        --> CAACAACTCTTTGCAAGAATAGTTGGTGGACTCGGTGGTAGAGCCGCTGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW728580       <-- CAACAACTCTTTGCAAGAATCGTTGGTGGACTCGGTGGTAGAGCCGCTGA
EW719802       <-- CAACAACTCTTTGCAAGAATAGTTGGTGGACTCGGTGGTAGAGCCGCTGA
EW728724       <-- CAACAACTCTTTGCAAGAATAGTTGGTGGACTCGGTGGTAGAGCCGCTGA
EY920904       <-- ..................................................
EV532500       <-- ..................................................
FD961121       <-- ..................................................
FY449092       --> CAACAACTCTTTGCAAGAATAGTTGGTGGACTCGGTGGTAGAGCCGCTGA
EW724527       --> CAACAACTCTTTGCAAGAATCGTTGGTGGACTCGGTGGTAGAGCCGCTGA
EY940046       --> CAACAACTCTTTGCAAGAATAGTTGGTGGACTCGGTGGTAGAGCCGCTGA
EW715029       --> CAACAACTCTTTGCAAGAATAGTTGGTGGACTCGGTGGTAGAGCCGCTGA
EV566015       --> CAACAACTCTTTGCAAGAATCGTTGGTGGACTCGGTGGTAGAGCCGCTGA
EW723534       --> CAACAACTCTTTGCAAGAATAGTTGGTGGACTCGGTGGTAGAGCCGCTGA
FD941717       --> ..................................................

               651    -    701
UN21431        --> AGAAATCATCTTTGGTGAGCCTGAGGTTACTACTGGAGCCGTTGGTGACT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW728580       <-- AGAAATCATCTTCGGTGAGCCTGAGGTTACTACTGGCGCGGTTGGTGACT  Raphanus sativus cv Early Scarlet Globe
EW719802       <-- AGAAATCATCTTTGGTGAGCCTGAGGTTACTACTGGAGCCGTTGGTGACT  Raphanus sativus var. oleiformis
EW728724       <-- AGAAATCATCTTTGGTGAGCCTGAGGTTACTACTGGAGCCGTTGGTGACT  Raphanus sativus cv Early Scarlet Globe
EY920904       <-- AGAAATCATGTTCGGTGAGCCTGAGGTTACTACTGGCGCGGTTGGTGACT  Raphanus raphanistrum subsp. landra
EV532500       <-- .....................................gcgGTTGGTGACT  Raphanus raphanistrum subsp. maritimus
FD961121       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FY449092       --> AGAAATCATCTTTGGTGAGCCTGAGGTTACTACTGGAGCCGTTGGTGACT  Raphanus sativus cv GSK3-1
EW724527       --> AGAAATCATCTTCGGTGAGCCTGAGGTTACTACTGGCGCGGTTGGTGACT  Raphanus sativus cv Early Scarlet Globe
EY940046       --> AGAAATCATCTTTGGTGAGCCTGAGGTTACTACTGGAGCCGTTGGTGACT  Raphanus sativus cv Early Scarlet Globe
EW715029       --> AGAAATCATCTTTGGTGAGCCTGAGGTTACTACTGGAGCCGTTGGTGACT  Raphanus sativus var. oleiformis
EV566015       --> AGAAATCATATTCGGTGAGCCTGAGGTTACTACTGGCGCGGTTGGTGACT  Raphanus raphanistrum subsp. landra
EW723534       --> AGAAATCATCTTTGGTGAGCCTGAGGTTACTACTGGAGCCGTTGGTGACT  Raphanus sativus cv Early Scarlet Globe
FD941717       --> ..................................................  Raphanus sativus var. oleiformis

               701    -    751
UN21431        --> TGCAACAGATCACCGGTTTGGCTAAGCAGATGGTAACAACATTTGGAATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW728580       <-- TGCAACAGATCACCGGTTTGGCTAAGCAGATGGTAACAACATTTGGAATG
EW719802       <-- TGCAACAGATCACCGGTTTGGCTAAGCAGATGGTAACAACATTTGGAATG
EW728724       <-- TGCAACAGATCACCGGTTTGGCTAAGCAGATGGTAACAACATTTGGAATG
EY920904       <-- TGCAACAGATCACCGGTTTGGCTAAGCAGATGGTAACAACATTTGGAATG
EV532500       <-- TGCAACAGATCACCGGTTTGGCTAAGCAGATGGTAACAACATTTGGAATG
FD961121       <-- ..................................................
FY449092       --> TGCAACAGATCACCGGTTTGGCTAAGCAGATGGTAACAACATTTGGAATG
EW724527       --> TGCAACAGATCACCGGTTTGGCTAAGCAGATGGTAACAACATTTGGAATG
EY940046       --> TGCAACAGATCACCGGTTTGGCTAAGCAGATGGTAACAACATTTGGAATG
EW715029       --> TGCAACAGATCACCGGTTTGGCTAAGCAGATGGTAACAACATTTGGAATG
EV566015       --> TACAACAGATCACCGGTTTGGCTAAGCAGATGGTAACAACATTTGGAATG
EW723534       --> TGCAACAGATCACCGGTTTGGCTAAGCAGATGGTAACAACATTTGGAATG
FD941717       --> ..................................................

               751    -    801
UN21431        --> TCTGAAATTGGACCATGGTCGTTGATGGATTCATCGGCGCAAAGCGATGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW728580       <-- TCTGAAATTGGACCATGGTCGTTGATGGATTCATCGGCGCAAAGCGATGT  Raphanus sativus cv Early Scarlet Globe
EW719802       <-- TCTGAAATTGGACCATGGTCGTTGATGGATTCATCGGCGCAAAGCGATGT  Raphanus sativus var. oleiformis
EW728724       <-- TCTGAAATTGGACCATGGTCGTTGATGGATTCATCGGCGCAAAGCGATGT  Raphanus sativus cv Early Scarlet Globe
EY920904       <-- TCTGAAATTGGACCATGGTCGTTGATGGATTCATCGGCACAAAGCGATGT  Raphanus raphanistrum subsp. landra
EV532500       <-- TTTGAAATTGGGCCATGGTCGTTGATGGATTCATCGGCACAAAGCGATGT  Raphanus raphanistrum subsp. maritimus
FD961121       <-- ....AAATTGGACCATGGTCGTTGATGGATTCATCGGCACAAAGCGATGT  Raphanus raphanistrum subsp. maritimus
FY449092       --> TCTGAAATTGGACCATGGTCGTTGATGGATTCATCGGCGCAAAGCGATGT  Raphanus sativus cv GSK3-1
EW724527       --> TCTGAAATTGGACCATGGTCGTTGATGGATTCATCGGCGCAAAGCGATGT  Raphanus sativus cv Early Scarlet Globe
EY940046       --> TCTGAAATTGGACCATGGTCGTTGATGGATTCATCGGCGCAAAGCGATGT  Raphanus sativus cv Early Scarlet Globe
EW715029       --> TCTGAAATTGGACCATGGTCGTTGATGGATTCATCGGCGCAA-GCGATGT  Raphanus sativus var. oleiformis
EV566015       --> TCTGAAATTGGACCATGGTCGTTGATGGATTCATCGGCACAAAGCGATGT  Raphanus raphanistrum subsp. landra
EW723534       --> TCTGAAATTGGACCATGGTCGTTGATGGATTCATCGGCGCAAAGCGATGT  Raphanus sativus cv Early Scarlet Globe
FD941717       --> ..................................................  Raphanus sativus var. oleiformis

               801    -    851
UN21431        --> GATCATGAGGATGATGGCAAGAAACTCCATGTCCGAGAAGCTCGCAGAGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW728580       <-- GATCATGAGGATGATGGCGAGAAACTCCGTGTCCGAGAAGCTTGCAGAGG
EW719802       <-- GATCATGAGGATGATGGCAAGAAACTCTATGTCCGAGAAGCTCGCAGAGG
EW728724       <-- GATCATGAGGATGATGGCAAGAAACTCCATGTCCGAGAAGCTCGCAGAGG
EY920904       <-- GATCATGAGGATGATGGCAAGAAACTCCATGTCCGAGAAGCTCGCAGAGG
EV532500       <-- GATCATGAGGATGATGGCAAGAAACTCCATGTCCGAGAAGCTCGCAGAGG
FD961121       <-- GATCATGAGGATGATGGCAAGAAACTCCATGCCCGAGAAGCTCGCAGAGG
FY449092       --> GATCATGAGGATG.....................................
EW724527       --> GATCATGAG-ATGATGGCGAGAAACTCCgtg...................
EY940046       --> GATCATGAGGATGATGGCAAGAAACTCCATGTCCGAGAAGCTCGCAGAGG
EW715029       --> GATCATGAGGATGATGGCAAGAA-CTCTATGTCCGAGAAGCTCGCAGAGG
EV566015       --> GATCATGAGGATGATGGCAAGAAACTCCATGTCCGAGAAGCTCGCAGAGG
EW723534       --> GATCATGAGGATGATGGCAAGAAACTCCATGTCCGAGAAGCTCGCAGAGG
FD941717       --> ..................................................

               851    -    901
UN21431        --> ACATTGACTCTGCGGTGAAGAAACTGTCAGACAGTGCATACGAGATAGCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW728580       <-- ACATTGACACTGCGGTGAAGAAACTATCGGACAGTGCATACGAGATAGCT
EW719802       <-- ACATTGACTCTGCGGCGAAGAAACTGTCAGACAGTGCATACGAGATAGCT
EW728724       <-- ACATTGACTCTGCGGTGAAGAAACTGTCAGACAGTGCATACGAGATAGCT
EY920904       <-- ACATTGACTTTGCGGTGAAGAAACTGTCAGACAGTGCATACGAGATAGCT
EV532500       <-- ACATTGATTTTGCGGTGAAGAAACTGTCAGACAGTGCATACGAGATAGCT
FD961121       <-- ACATTGATTCTGCGGTGAAGAAACTGTCAGACAGTGCATACGAGATAGCT
FY449092       --> ..................................................
EW724527       --> ..................................................
EY940046       --> ACATTGACTCTGCGGTGAAGAAACTGTCAGACAGTGCATACGAGATAGCT
EW715029       --> ACATTGACTCTGCGGCGAAGAAACTGTCAGACAGTGCATACGAGATAGCT
EV566015       --> ACATTGACTCTGCGGTGAAGAAACTGTCAGACAGTGCATACGAGATAGCT
EW723534       --> ACATTGACTCTGCGGTGAAGAAACTGTCAGACAGTGCATACGAGATAGCT
FD941717       --> ..................................................

               901    -    951
UN21431        --> TTAAGCCACATAAGGAACAACCGTGAAGCCATGGATAAGATAGTTGAAGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW728580       <-- TTAAGCCACATAAGGAACAACCGTGAAGCCATGGATAAGATAGTTGAAGT  Raphanus sativus cv Early Scarlet Globe
EW719802       <-- TTAAGCCACATAAGGAACAACCGTGAAGCCATGGATAAGATATTTGGAGT  Raphanus sativus var. oleiformis
EW728724       <-- TTAAGCCACATAAGGAACAACCGTGAAGCCATGGATAAGATAGTTGAAGT  Raphanus sativus cv Early Scarlet Globe
EY920904       <-- TTAAGCCACATAAGGAACAACCGTGAGGCCATGGATAAGATAGTTGAAGT  Raphanus raphanistrum subsp. landra
EV532500       <-- TTAAGCCACATAAGGAACAACCGTGAGGCCATGGATAAGATAGTTGAAGT  Raphanus raphanistrum subsp. maritimus
FD961121       <-- TTAAGCCACATAAGGAACAACCGTGAGGCCATGGATAAGATAGTTGAAGT  Raphanus raphanistrum subsp. maritimus
FY449092       --> ..................................................  Raphanus sativus cv GSK3-1
EW724527       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EY940046       --> CTAAGC-ACATAAGacaccgtga...........................  Raphanus sativus cv Early Scarlet Globe
EW715029       --> CTAAGCCACATAAGGAACAACCGTGAAGCCATGGA...............  Raphanus sativus var. oleiformis
EV566015       --> CTAAGCCACATAAGGAACAACCGTGAGGCCATGGATAAGATAGTTGAAGT  Raphanus raphanistrum subsp. landra
EW723534       --> CTAAGCCACATAAGGAACAACCGTGAAGCCATGGATAAGATAGTTGAAGT  Raphanus sativus cv Early Scarlet Globe
FD941717       --> ..................................................  Raphanus sativus var. oleiformis

               951    -   1001
UN21431        --> GCTTCTGGAGAAAGAAACTATCGGAGGCGACGAGTTCCGAGCAATTCTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW728580       <-- GCTTCTGGAGAAAGAAACTATCGGAGGCGACGAGTTCCGAGCAATTCTTT  Raphanus sativus cv Early Scarlet Globe
EW719802       <-- GCTTCTGGAGAAAGAAACTATCGGAGGCGACGAGTTCCGAGCAATTCTCT  Raphanus sativus var. oleiformis
EW728724       <-- GCTTCTGGAGAAAGAAACTATCGGAGGCGACGAGTTCCGAGCAATTCTCT  Raphanus sativus cv Early Scarlet Globe
EY920904       <-- GCTTCTAGAGAAAGAAACTATCGGAGGCGACGAGTTCCGAGCAATTCTCT  Raphanus raphanistrum subsp. landra
EV532500       <-- GCTTTTAGAGAAAGAAACTATCGGAGGGGACGAGTTCCGAGCAAT.....  Raphanus raphanistrum subsp. maritimus
FD961121       <-- GCTTCTAGAGAAAGAAACTATCGGAGGCGACGAGTTCCGAGCAATTCTCT  Raphanus raphanistrum subsp. maritimus
FY449092       --> ..................................................  Raphanus sativus cv GSK3-1
EW724527       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EY940046       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EW715029       --> ..................................................  Raphanus sativus var. oleiformis
EV566015       --> GCTTCTAGAGAAAGAAACTATCGGAGGCGACGAGTTCCGAGCAATTCTCT  Raphanus raphanistrum subsp. landra
EW723534       --> GCTTCTGGAGAAAGAAACTATCGGAGGCGACGAGTTCCGAGCAATTCTCT  Raphanus sativus cv Early Scarlet Globe
FD941717       --> ..................................................  Raphanus sativus var. oleiformis

               1001   -   1051
UN21431        --> CCGAGTTCACTGAGATCCCGCCGGAAAACCGAGTTCCTGCCTCAATCCCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW728580       <-- CCGAGTTCACTGAGATCCCGCCGGAAAACCGAGTTCCTACCTCAACCCCA
EW719802       <-- CCGAGTTCACTGAGATCCCGCCGGAAAACCGAGTTCCTGCCTCAATCCCA
EW728724       <-- CCGAGTTCACTGAGATCCCGCCGGAAAACCGAGTTCCTGCCTCAATCCCA
EY920904       <-- CCGAGTTCACTGAGATCCCGCCGGAAAACCGAGTTCCTGCCTCAATCCCA
EV532500       <-- ..................................................
FD961121       <-- CCGAGTTCACTGAGATCCCGCCGGAAAACCGAGTTCCTGCCTCAATCCCA
FY449092       --> ..................................................
EW724527       --> ..................................................
EY940046       --> ..................................................
EW715029       --> ..................................................
EV566015       --> CCGAGTTCACTGAGATCC-GCCGGAAAACCGAGTTCCTGCCTCAATCCCA
EW723534       --> CCGAGTTCACTGAGATCCCGCCGGAAAACCGAGTTCCTGCCTCAATCCCA
FD941717       --> ..................................................

               1051   -   1101
UN21431        --> ACATCTACACCAACGCCAGCTTCTGTCTAGGTAATGAATCTGTATACTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW728580       <-- ACATC.............................................
EW719802       <-- ACATCTACACCAACGCCAGCTTCTGTCTAGGTAATGAATCTGTATACTTC
EW728724       <-- ACATCTACACCAACGCCAGCTTCTGTCTAGGTAATGAATCTGTATACTTC
EY920904       <-- ACATTTACACCAACGCCAGCTTCTGTCTAGGTAATGAATCTGTATACTTC
EV532500       <-- ..................................................
FD961121       <-- ACATTTACACCAACGCCAGCTTCTGTTTAGGTAATGAATCTGTATACTTC
FY449092       --> ..................................................
EW724527       --> ..................................................
EY940046       --> ..................................................
EW715029       --> ..................................................
EV566015       --> ACATCTACACCAACGCCAGCTTCTGTCTAGGTAATGAATCTGTATACTTC
EW723534       --> ACATCTACACCAACGCCAGCTTCTGTCTAGGTAATGAATCTGTATACTTC
FD941717       --> ..................................................

               1101   -   1151
UN21431        --> CGATTTTTCTGTACATTTGTACTGTCAAAACTTGAGCTCTAGAAATATGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW728580       <-- ..................................................
EW719802       <-- CGATTTTTCTGTACATTTGTACTGTCAAAACTTGAGCTCTAGAAATATGT
EW728724       <-- CGATTTTTCTGTACATTTGTACTGTCAAAACTTGAGCTCTAGAAATATGT
EY920904       <-- TGATTTTTCTGTACATTTGTACTGTCAAAACTTGAGCTCTAGAAATATGT
EV532500       <-- ..................................................
FD961121       <-- CGATTTTTCTGTACATTTGTACTGTCAAAACTTGAGCTCTAGAAATATGT
FY449092       --> ..................................................
EW724527       --> ..................................................
EY940046       --> ..................................................
EW715029       --> ..................................................
EV566015       --> TGATTTTTCTGTACATTTGTACTGTCAAAACTTGAGCTCTAGAAATATGT
EW723534       --> CGATTTTTCTGTACATTTGTACTGTCAAAACTTGAGCTCTAGAAATATGT
FD941717       --> ...TTTTTCTGTACATTTGTACTGTCAAAACTTGAGCTCTAGAAATATGT

               1151   -   1201
UN21431        --> GGTGATGTCCCAATACTGTGTAACACAAGTAAATGTTATAAGTGGAATTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW728580       <-- ..................................................
EW719802       <-- GGTGATGTCCCAATACTGTGTAACACAAGTAAATGTTATAAGTGGAATTG
EW728724       <-- GGTGATGTCCCAATACTGTGTAACACAAGTAAATGTTATAAGTGGAATTG
EY920904       <-- GGTGATGTCCCAATACTGTGTAACACAAGTAAATGTTATAAGTGGAATTG
EV532500       <-- ..................................................
FD961121       <-- GGTGATGTCCCAATACTGTGTAACACAAGTAAATGTTATAAGTGGAATTG
FY449092       --> ..................................................
EW724527       --> ..................................................
EY940046       --> ..................................................
EW715029       --> ..................................................
EV566015       --> GGTGATGTCCCAATACTGTGTAGCACAAGTAAATGTTA............
EW723534       --> GGTGATGTCCCAATACTGTGTA-CACAAGTAAATGTTATAAGTGGGATTG
FD941717       --> GGTGATGTCCCAATACTGTGTAACACAAGTAAATGTTATAAGTGGAATTG

               1201   -   1251
UN21431        --> GTATATTCACCAATGCTTTGTTCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~
EW728580       <-- ........................
EW719802       <-- GTATATTCACCAA...........
EW728724       <-- GT......................
EY920904       <-- GTATATTCACCg............
EV532500       <-- ........................
FD961121       <-- GTATATTCACCAATGCTTTGTTCC
FY449092       --> ........................
EW724527       --> ........................
EY940046       --> ........................
EW715029       --> ........................
EV566015       --> ........................
EW723534       --> ........................
FD941717       --> GTATATTCACC.............