RadishBase

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Alignment for radish unigene UN21434

               1      -     51
UN21434        --> GTTACGTTTTCTGGATTGTTTGCAACTTGT-AGGGAAGAGAGGAGGGGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV529399       <-- ..................................................
FD583313       <-- ..................................................
EW722005       <-- ..................................................
EX753020       <-- ..................................................
FD530956       <-- ..................................................
FD537688       <-- ..................................................
EY909223       <-- ..................................................
EX767886       <-- ..................................................
FD567268       <-- ..................................................
FD584037       <-- ..................................................
EY894570       <-- ..................................................
FD961460       <-- ..................................................
FD545177       <-- ..................................................
FD566614       <-- ..................................................
EX749283       --> GTTACGTTTTCTTCATTGTTTGCAACTTGT-AGGGAAGAGAGGAGGGGAG
EV525977       --> ............GGATTGTTTGCAACTTGT-AGGGAAGAGAGGAGGGGAG
EY912894       --> ............GGATTGTTTGCAACTTGT-AGGGAAGAGAGGAGGGGAG
FD535259       --> ............GGATTGTTTGCAACTTGT-AGGGAAGAGAGGAGGGGAG
FD579303       --> ............GGATTGTTTGCAACTTGTCAGGGAAGAGAGGAGGGGAG
FD965831       --> ............GGATTGTTTGCAACTTGT-AGGGAAGAGAGGAGGGGAG
FD549085       --> .............GATTGTTTGCAACTTGTCAGGGAAGAGAGGAGGGGAG
EW718258       --> ...............ggGTTTGCAACTTGTCAGGGAAGAGAGGAGGGGAG
EV524396       --> .........................CTTGT-AGGGAAGAGAGGAGGGGAG
EY898539       --> ..................................................

               51     -    101
UN21434        --> AGAGAG--GGGGAAACCCTAGATTCCGTTTGCTCCGTCTCTCTCTGAATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV529399       <-- ..................................................
FD583313       <-- ..................................................
EW722005       <-- ..................................................
EX753020       <-- ..................................................
FD530956       <-- ..................................................
FD537688       <-- ..................................................
EY909223       <-- ..................................................
EX767886       <-- ..................................................
FD567268       <-- ..................................................
FD584037       <-- ..................................................
EY894570       <-- ..................................................
FD961460       <-- ..................................................
FD545177       <-- ..................................................
FD566614       <-- ..................................................
EX749283       --> AGAGAG--GGGGAAACCCTAGATTCCGTTTGCTCCGTCTCTCTCTGAATC
EV525977       --> AGAGAG--GGGGAAACCCTAGATTCCGTTTGCTCCGTCTCTCTCTGAATC
EY912894       --> AGAGAGAGGGGGAAACCCTAGATTCCGTTTGCTCCGACTCTCTCTGAATC
FD535259       --> AGAGAG--GGGGAAACCCTAGATTCCGTTTGCTCCGTCTCTCTCTGAATC
FD579303       --> AGAGAG--GGGGAAACCCTAGATTCCGTGTGCTCCGTCTCTCTCTGAATC
FD965831       --> AGAGAG--GGGGAAACCCTAGATTCCGTTTGCTCCGTCTCTCTCTGAATC
FD549085       --> AGAGAG--GGGGAAACCCTAGATTCCGTGTGCTCCGTCTCTCTCTGAATC
EW718258       --> AGAGAG--GGGGAAACCCTAGATTCCGTGTGCTCCGTCTCTCTCTGAATC
EV524396       --> AGAGAG--GGGGAAACCCTAGATTCCGTTTGCTCCGTCTCTCTCTGAATC
EY898539       --> ..................................................

               101    -    151
UN21434        --> GAAGGCGATGGTGTTCTACTTCAAGGCACGACCAGATGCTGGAGACTACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV529399       <-- ................................................CA
FD583313       <-- ..................................................
EW722005       <-- ..................................................
EX753020       <-- ..................................................
FD530956       <-- ..................................................
FD537688       <-- ..................................................
EY909223       <-- ..................................................
EX767886       <-- ..................................................
FD567268       <-- ..................................................
FD584037       <-- ..................................................
EY894570       <-- ..................................................
FD961460       <-- ..................................................
FD545177       <-- ..................................................
FD566614       <-- ..................................................
EX749283       --> GAAGGCGATGGTGTTCTACTTCAAGGCACGACCAGAT-CTGGAGACTACA
EV525977       --> GAAGGCGATGGTGTTCTACTTCAAGGCACGACCAGATGCTGGAGACTACA
EY912894       --> GAAGGCGATGGTGTTCTACTTCAAGGCACGACCAGATGCTGGAGACTACA
FD535259       --> GAAGGCGATGGTGTTCTACTTCAAGGCACGACCAGATGCTGGAGACTACA
FD579303       --> GAAGGCGATGGTGTTCTACTTCAAGGCACGACCAGATGCTGGAGACTACA
FD965831       --> GAAGGCGATGGTGTTCTACTTCAAGGCACGACCAGATGCTGGAGACTACA
FD549085       --> GAAGGCGATGGTGTTCTACTTCAAGGCACGACCAGATGCTGGAGACTACA
EW718258       --> GAAGGCGATGGTGTTCTACTTCAAGGCACGACCAGATGCTGGAGACTACA
EV524396       --> GAAGGCGATGGTGTTCTACTTCAAGGCACGACCAGATGCTGGAGACTACA
EY898539       --> ..gGGCGATGGTGTTCTACTTCAAGGCACGACCAGATGCTGGAGACTACA

               151    -    201
UN21434        --> CCATCTTCATGGGGCTTGACAAGTTCGAGAACGAGGAGCTCATCAAGTAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV529399       <-- CCATCTTCATGGGGCTTGACAAGTTCGAGAACGAGGAGCTCATCAAGTAC
FD583313       <-- ....................................AGCTCATCAAGTAC
EW722005       <-- ..................................................
EX753020       <-- ..................................................
FD530956       <-- ..................................................
FD537688       <-- ..................................................
EY909223       <-- ..................................................
EX767886       <-- ..................................................
FD567268       <-- ..................................................
FD584037       <-- ..................................................
EY894570       <-- ..................................................
FD961460       <-- ..................................................
FD545177       <-- ..................................................
FD566614       <-- ..................................................
EX749283       --> CCATCTTCATGGGGCTTGACAAGTTCGAGAACGAGGAGCTCATCAAGTAC
EV525977       --> CCATCTTCATGGGGCTTGACAAGTTCGAGAACGAGGAGCTCATCAAGTAC
EY912894       --> CCATCTTCATGGGGCTTGACAAGTTCGAGAACGAGGAGCTCATCAAGTAC
FD535259       --> CCATCTTCATGGGGCTTGACAAGTTCGAGAACGAGGAGCTCATCAAGTAC
FD579303       --> CCATCTTCATGGGGCTTGACAAGTTCGAGAACGAGGAGCTCATCAAGTAC
FD965831       --> CCATCTTCATGGGGCTTGACAAGTTCGAGAACGAGGAGCTCATCAAGTAC
FD549085       --> CCATCTTCATGGGGCTTGACAAGTTCGAGAACGAGGAGCTCATCAAGTAC
EW718258       --> CCATCTTCATGGGGCTTGACAAGTTCGAGAACGAGGAGCTCATCAAGTAC
EV524396       --> CCATCTTCATGGGGCTTGACAAGTTCGAGAACGAGGAGCTCATCAAGTAC
EY898539       --> CCATCTTCATGGGGCTTGACAAGTTCGAGAACGAGGAGCTCATCAAGTAC

               201    -    251
UN21434        --> GGCTTCCCCGAAGACGTCTGGTTTCACGTTGACAAAATGTCCTCAGCTCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV529399       <-- GGCTTCCCCGAAGACGTCTGGTTTCACGTTGACAAAATGTCCTCAGCTCA  Raphanus raphanistrum subsp. maritimus
FD583313       <-- GGCTTCCCCGAAGACGTCTGGTTTCACGTTGACAAAATGTCTTCAGCTCA  Raphanus sativus cv Rat-Tail Radish #3870
EW722005       <-- ............GACGTCTGGTTTCACGTTGACAAAATGTCTTCAGCTCA  Raphanus sativus var. oleiformis
EX753020       <-- .............ACGTCTGGTTTCACGTTGACAAAATGTCCTCAGCTCA  Raphanus raphanistrum subsp. maritimus
FD530956       <-- ..............CGTCTGGTTTCACGTTGACAAAATGTCCTCAGCTCA  Raphanus raphanistrum subsp. maritimus
FD537688       <-- ...............................................TCA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY909223       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX767886       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD567268       <-- ..................................................  Raphanus sativus var. oleiformis
FD584037       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY894570       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD961460       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD545177       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD566614       <-- ..................................................  Raphanus sativus var. oleiformis
EX749283       --> GGCTTCCCCGAAGACGTCTGGTTTCACGTTGACAAAATGTCCTCAGCTCA  Raphanus raphanistrum subsp. maritimus
EV525977       --> GGCTTCCCCGAAGACGTCTGGTTTCACGTTGACAAAATGTCCTCAGCTCA  Raphanus raphanistrum subsp. maritimus
EY912894       --> GGCTTCCCCGAAGACGTCTGGTTTCACGTTGACAAAATGTCCTCAGCTCA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD535259       --> GGCTTCCCCGAAGACGTCTGGTTTCACGTTGACAAAATGTCCTCAGCTCA  Raphanus raphanistrum subsp. maritimus
FD579303       --> GGCTTCCCCGAAGACGTCTGGTTTCACGTTGACAAAATGTCTTCAGCTCA  Raphanus sativus cv Rat-Tail Radish #3870
FD965831       --> GGCTTCCCCGAAGACGTCTGGTTTCACGTTGACAAAATGTCCTCAGCTCA  Raphanus raphanistrum subsp. maritimus
FD549085       --> GGCTCCCCCGAAGACGTCTGGTTTCACGTTGACAAAATGTCCTCAGCTCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EW718258       --> GGCTTCCCCGAAGACGTCTGGTTTCACGTTGACAAAATGTCTTCAGCTCA  Raphanus sativus var. oleiformis
EV524396       --> GGCTTCCCCGAAGACGTCTGGTTTCACGTTGACAAAATGTCCTCAGCTCA  Raphanus raphanistrum subsp. maritimus
EY898539       --> GGCTTCCCCGAAGACGTCTGGTTTCACGTTGACAAAATGTCCTCAGCTCA  Raphanus raphanistrum subsp. maritimus

               251    -    301
UN21434        --> TGTTTACTTAAGGCTTCATAAAGGCCAAGGTCTTGATAACATTAACGAA-
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV529399       <-- TGTTTACTTAAGGCTTCATAAAGGCCAAGGTCTTGATAACATTAACGAA-  Raphanus raphanistrum subsp. maritimus
FD583313       <-- TGTTTACTTAAGGCTTCACAAAGGCCAAGGTTTTGATAACATTAACGAA-  Raphanus sativus cv Rat-Tail Radish #3870
EW722005       <-- TGTTTACTTAAGGCTTCACAAAGGCCAAGGTTTTGATAACATTAACGAA-  Raphanus sativus var. oleiformis
EX753020       <-- TGTTTACTTAAGGCTTCATAAAGGCCAAGGTCTTGATAACATTAACGAA-  Raphanus raphanistrum subsp. maritimus
FD530956       <-- TGTTTACTTAAGGCTTCATAAAGGCCAAGGTCTTGATAACATTAACGAA-  Raphanus raphanistrum subsp. maritimus
FD537688       <-- TGTTTACTTAAGGCTTCATAAAGGCCAAGGTTTTGATAACATTAACGAA-  Raphanus raphanistrum subsp. raphanistrum (MS)
EY909223       <-- ....................AAGGCCAAGGTCTTGATAACATTAACGAA-  Raphanus raphanistrum subsp. raphanistrum (NY)
EX767886       <-- .........................................TTAACGAAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD567268       <-- ...............................................AA-  Raphanus sativus var. oleiformis
FD584037       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY894570       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD961460       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD545177       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD566614       <-- ..................................................  Raphanus sativus var. oleiformis
EX749283       --> TGTTTACTTAAGGCTTCATAAAGGCCAAGGTCTTGATAACATTAACGAA-  Raphanus raphanistrum subsp. maritimus
EV525977       --> TGTTTACTTAAGGCTTCATAAAGTCCAAGGTCTTGATAACATTAACGAA-  Raphanus raphanistrum subsp. maritimus
EY912894       --> TGTTTACTTAAGGCTTCATAAAGGCCAAGGTCTTGATAACATTAACGAA-  Raphanus raphanistrum subsp. raphanistrum (NY)
FD535259       --> TGTTTACTTAAGGCTTCATAAAGGCCAAGGTCTTGATAACATTAACGAA-  Raphanus raphanistrum subsp. maritimus
FD579303       --> TGTTTACTTAAGGCTTCACAAAGGCCAAGGTTTTGATAACATTAACGAA-  Raphanus sativus cv Rat-Tail Radish #3870
FD965831       --> TGTTTACTTAAGGCTTCATAAAGGCCAAGGTCTTGATAACATTAACGAA-  Raphanus raphanistrum subsp. maritimus
FD549085       --> CGTTTACTTAAGGt....................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EW718258       --> TGTTTACTTAAGGCTTCACAAAGGCCAAGGTTTTGATAACATTAACGAA-  Raphanus sativus var. oleiformis
EV524396       --> TGTTTACTTAAGGCTTCATAAAGGCCAAGGTCTTGATAACATTAACGAA-  Raphanus raphanistrum subsp. maritimus
EY898539       --> TGTTTACTTAAGGCTTCATAAAGGCCAAGGTCTTGATAACATTAACGAA-  Raphanus raphanistrum subsp. maritimus

               301    -    351
UN21434        --> GGTGTTCTGGAGGACTGTGCTCAGCTTGTGAAAGCTAACTCCATTCAAGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV529399       <-- GGTGTTCTGGAGGACTGTGCTCAGCTTGTGAAAGCTAACTCCATTCAAGG  Raphanus raphanistrum subsp. maritimus
FD583313       <-- GGTGTGCTGGAGGACTGTGCTCAGCTTGTGAAAGCTAACTCCATTCAAGG  Raphanus sativus cv Rat-Tail Radish #3870
EW722005       <-- GGTGTGCTGGAGGACTGTGCTCAGCTTGTGAAAGCTAACTCCATTCAAGG  Raphanus sativus var. oleiformis
EX753020       <-- GGTGTTCTGGAGGACTGTGCTCAGCTTGTGAAAGCTAACTCCATTCAAGG  Raphanus raphanistrum subsp. maritimus
FD530956       <-- GGTGTTCTGGAGGACTGTGCTCAGCTTGTGAAAGCTAACTCCATTCAAGG  Raphanus raphanistrum subsp. maritimus
FD537688       <-- GGTGTGCTGGAGGACTGTGCTCAGCTTGTGAAAGCTAACTCCATTCAAGG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY909223       <-- GGTGTTCTGGAGGACTGTGCTCAGCTTGTGAAAGCTAACTCCATTCAAGG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX767886       <-- GGTGTTCTGGAGGACTGTGCTCAGCTTGTGAAAGCTAACTCCATTCAAGG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD567268       <-- GGTGTGCTGGAGGACTGTGCTCAGCTTGTGAAAGCTAACCCCATTCAAGG  Raphanus sativus var. oleiformis
FD584037       <-- ........................CTTGTGAAAGCTAACTCCATTCAAGG  Raphanus sativus cv Rat-Tail Radish #3870
EY894570       <-- ................................AGCTAACTCCATTCAAGG  Raphanus raphanistrum subsp. maritimus
FD961460       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD545177       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD566614       <-- ..................................................  Raphanus sativus var. oleiformis
EX749283       --> GGTGTTCTGGAGGACTGTGCTCAGCTTGTGAAAGCTAACTCCATTCAAGG  Raphanus raphanistrum subsp. maritimus
EV525977       --> GGTGTTCTGGAGGACTGTGCTCAGCTTGTGAAAGCTAACTCCATTCAAGG  Raphanus raphanistrum subsp. maritimus
EY912894       --> GGTGTTCTGGAGGACTGTGCTCAGCTTGTGAAAGCTAACTCCATTCAAGG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD535259       --> GGTGTTCTGGAGGACTGTGCTCAGCTTGTGAAAGCTAACTCCATTCAAGG  Raphanus raphanistrum subsp. maritimus
FD579303       --> GGTGTGCTGGAGGACTGTGCTCAGCTTGTGAAAGCTAACTCCATTCAAGG  Raphanus sativus cv Rat-Tail Radish #3870
FD965831       --> GGTGTTCTGGAGGACTGTGCTCAGCTTGTGAAAGCTAACTCCATTCAAGG  Raphanus raphanistrum subsp. maritimus
FD549085       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EW718258       --> GGTGTGCTGGAGGACTGTGCTCAGCTTGTGAAAGCTAACTCCATTCAAGG  Raphanus sativus var. oleiformis
EV524396       --> GGTGTTCTGGAGGACTGTGCTCAGCTTGTGAAAGCTAACTCCATTCAAGG  Raphanus raphanistrum subsp. maritimus
EY898539       --> GGTGTTCTGGAGGACTGTGCTCAGCTTGTGAAAGCTAACTCCATTCAAGG  Raphanus raphanistrum subsp. maritimus

               351    -    401
UN21434        --> CAACAAGGTGAACAACGTCGATGTTGTGTACACCCCGTGGTCCAACTTGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV529399       <-- CAACAAGGTGAACAACGTCGATGTTGTGTACACCCCGTGGTCCAACTTGA  Raphanus raphanistrum subsp. maritimus
FD583313       <-- CAACAAGGTGAACAACGTTGATGTTGTGTACACTCCGTGGTCCAACTTGA  Raphanus sativus cv Rat-Tail Radish #3870
EW722005       <-- CAACAAGGTGAACAACGTTGATGTTGTGTACACTCCGTGGTCCAACTTGA  Raphanus sativus var. oleiformis
EX753020       <-- CAACAAGGTGAACAACGTCGATGTTGTGTACACCCCGTGGTCCAACTTGA  Raphanus raphanistrum subsp. maritimus
FD530956       <-- CAACAAGGTGAACAACGTCGATGTTGTGTACACCCCGTGGTCCAACTTGA  Raphanus raphanistrum subsp. maritimus
FD537688       <-- CAACAAGGTGAACAACGTTGATGTTGTGTACACCCCGTGGTCCAACTTGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY909223       <-- CAACAAGGTGAACATCGTCGATGTTGTGTACACCCCGTGGTCCAACTCGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX767886       <-- CAACAAGGTGAACAACGTCGATGTTGTGTACACCCCGTGGTCCAACTTGA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD567268       <-- CAACAAGGTGAACAACGTTGATGTTGTGTACACTCCGTGGTCCAACTTGA  Raphanus sativus var. oleiformis
FD584037       <-- CAACAAGGTGAACAACGTTGATGTTGTGTACACTCCGTGGTCCAACTTGA  Raphanus sativus cv Rat-Tail Radish #3870
EY894570       <-- CAACAAGGTGAACAACGTCGATGTTGTGTACACCCCGTGGTCCAACTTGA  Raphanus raphanistrum subsp. maritimus
FD961460       <-- ..........................TGTACACCCCGTGGTCCAACTTGA  Raphanus raphanistrum subsp. maritimus
FD545177       <-- ............................TACACCCCGTGGTCCAACTTGA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD566614       <-- ..................................................  Raphanus sativus var. oleiformis
EX749283       --> CAACAAGGTGAACAACGTCGATGTTGTGTACACCCCGTGGTCCAACTTGA  Raphanus raphanistrum subsp. maritimus
EV525977       --> CAACAAGGTGAACAACGTCGATGTTGTGTACACCTCGTGGTCCAACTTGA  Raphanus raphanistrum subsp. maritimus
EY912894       --> CAACAAGGTGAACATCGTCGATGTTGTGTACACCCCGTGGTCCAACTCGA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD535259       --> CAACAAGGTGAACAACGTCGATGTTGTGTACACCCCGTGGTCCAACTTGA  Raphanus raphanistrum subsp. maritimus
FD579303       --> CAACAAGGTGAACAACGTTGATGTTGTGTACACTCCGTGGTCCAACTTGA  Raphanus sativus cv Rat-Tail Radish #3870
FD965831       --> CAACAAGGTGAACAACGTCGATGTTGTGTACACCCCGTGGTCCAACTTGA  Raphanus raphanistrum subsp. maritimus
FD549085       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EW718258       --> CAACAAGGTGAACAACGTTGATGTTGTGTACACTCCGTGGTCCAACTTGA  Raphanus sativus var. oleiformis
EV524396       --> CAACAAGGTGAACAACGTCGATGTTGTGTACACCCCGTGGTCCAACTTGA  Raphanus raphanistrum subsp. maritimus
EY898539       --> CAACAAGGTGAACAACGTCGATGTTGTGTACACCCCGTGGTCCAACTTGA  Raphanus raphanistrum subsp. maritimus

               401    -    451
UN21434        --> AGAAAACCGCCTCCATGGATGTTGGTCAAGTTGGTTTCCACAATTCAAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV529399       <-- AGAAAACCGCCTCCATGGATGTTGGTCAAGTTGGTTTCCACAATTCAAAG  Raphanus raphanistrum subsp. maritimus
FD583313       <-- AGAAAACCGCCTCCATGGATGTTGGTCAAGTTGGTTTCCACAATTCGAAG  Raphanus sativus cv Rat-Tail Radish #3870
EW722005       <-- AGAAAACCGCCTCCATGGATGTTGGTCAAGTTGGTTTCCACAATTCGAAG  Raphanus sativus var. oleiformis
EX753020       <-- AGAAAACCGCCTCCATGGATGTTGGTCAAGTTGGTTTCCACAATTCAAAG  Raphanus raphanistrum subsp. maritimus
FD530956       <-- AGAAAACCGCCTCCATGGATGTTGGTCAAGTTGGTTTCCACAATTCAAAG  Raphanus raphanistrum subsp. maritimus
FD537688       <-- AGAAAACCGCCTCCATGGATGTTGGTCAAGTTGGTTTCCACAATTCAAAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY909223       <-- AGAAAACCGCCTCCATGGATGTTGGTCAAGTTGGTTTCCACAATTCAAAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX767886       <-- AGAAAACCGCCTCCATGGATGTTGGTCAAGTTGGTTTCCACAATTCAAAG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD567268       <-- A-AAAACCGCCTCCATGGATGTTGGTCAAGTTGGTTTCCACAATTCGAAG  Raphanus sativus var. oleiformis
FD584037       <-- AGAAAACCGCCTCCATGGATGTTGGTCAAGTTGGTTTCCACAATTCGAAG  Raphanus sativus cv Rat-Tail Radish #3870
EY894570       <-- AGAAAACCGCCTCCATGGATGTTGGTCAAGTTGGTTTCCACAATTCAAAG  Raphanus raphanistrum subsp. maritimus
FD961460       <-- AGAAAACCGCCTCCATGGATGTTGGTCAAGTTGGTTTCCACAATTCAAAG  Raphanus raphanistrum subsp. maritimus
FD545177       <-- AGAAAACCGCCTCCATGGATGTTGGTCAAGTTGGTTTCCACAATTCAAAG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD566614       <-- ..................................................  Raphanus sativus var. oleiformis
EX749283       --> AGAAAACCGCCTCCATGGATGTTGGTCAAGTTGGTTTCCACAATTCAAAG  Raphanus raphanistrum subsp. maritimus
EV525977       --> AGAAAACCGCCTCCATGGATGTTGGTCAAGTTGGTTTCCACAATTCAAAG  Raphanus raphanistrum subsp. maritimus
EY912894       --> AGAAAACCGCCTCCATGGATGTTGGTCAAGTTGGTTTCCACAATTCAAAG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD535259       --> AGAAAACCGCCTCCATGGATGTTGGTCAAGTTGGTTTCCACAATTCAAAG  Raphanus raphanistrum subsp. maritimus
FD579303       --> AGAAAACCGCCTCCATGG................................  Raphanus sativus cv Rat-Tail Radish #3870
FD965831       --> AGAAAACCGCCTCCATGGATGTTGGTCAAGTTGGTTTCCACAATTCAAAG  Raphanus raphanistrum subsp. maritimus
FD549085       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EW718258       --> AGAAAACCGCCTCCATGGATGTTGGTCAAGTTGGTTTCCACAATTCGAAG  Raphanus sativus var. oleiformis
EV524396       --> AGAAAACCGCCTCCATGGATGTTGGTCAAGTTGGTTTCCACAATTCAAAG  Raphanus raphanistrum subsp. maritimus
EY898539       --> AGAAAACCGCCTCCATGGATGTTGGTCAAGTTGGTTTCCACAATTCAAAG  Raphanus raphanistrum subsp. maritimus

               451    -    501
UN21434        --> ATGGTCCGGACTATCAGAGTGGAGAAACGAGTCAATGATATTGTTAACAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV529399       <-- ATGGTCCGGACTATCAGAGTGGAGAAACGAGTCAATGATATTGTTAACAG
FD583313       <-- ATGGTCCGGACTATCAGAGTGGAGAAACGAGTCAATGATATTGTTAACAG
EW722005       <-- ATGGTCCGGACTATCAGAGTGGAGAAACGAGTCAATGATATTGTTAACAG
EX753020       <-- ATGGTCCGGACTATCAGAGTGGAGAAACGAGTCAATGATATTGTTAACAG
FD530956       <-- ATGGTCCGGACTATCAGAGTGGAGAAACGAGTCAATGATATTGTTAACAG
FD537688       <-- ATGGTCCGGACTATCAGAGTGGAGAAACGAGTCAACGATATAGTTAACAG
EY909223       <-- ATGGTCCGGACTATCAGAGTGGAGAAACGAGTCAATGATATTGTTAACAG
EX767886       <-- ATGGTCCGGACTATCAGAGTGGAGAAACGAGTCAATGATATTGTTAACAG
FD567268       <-- ATGGTCCGGACTATCAGAGTGGAGAAACGAGTCAATGATATTGTTAACAG
FD584037       <-- ATGGTCCGGACTATCAGAGTGGAGAAACGAGTCAATGATATTGTTAACAG
EY894570       <-- ATGGTCCGGACTATCAGAGTGGAGAAACGAGTCAATGATATTGTTAACAG
FD961460       <-- ATGGTCCGGACTATCAGAGTGGAGAAACGAGTCAATGATATTGTTAACAG
FD545177       <-- ATGGTCCGGACTATCAGAGTGGAGAAACGAGTCAATGATATTGTTAACAG
FD566614       <-- ..................................................
EX749283       --> ATGGTCCGGACTATCAGAGTGGAGAAACGAGTCAATGATATTGTTAACAG
EV525977       --> ATGGTCCGGACTATCAGAGTGGAGAAACGAGTCAATGATATTGTTAACAG
EY912894       --> ATGGTCCGGACTATCAGAGTGGAGAAACGAGTCAATGATATTGTTAACAG
FD535259       --> ATGGTCCGGACTATCAGAGTGGAGAAACGAGTCAATGATATTGTTAACAG
FD579303       --> ..................................................
FD965831       --> ATGGTCCGGACTATCAGAGTGGAGAAACGAGTCAATGATATTGTTAACAG
FD549085       --> ..................................................
EW718258       --> ATGGTCCGGACTATCAGAGTGGAGAAACGAGTCAATGATATTGTTAACAG
EV524396       --> ATGGTCCGGACTATCAGAGTGGAGAAACGAGTCAATGATATTGTTAACAG
EY898539       --> ATGGTCCGGACTATCAGAGTGGAGAAACGAGTCAATGATATTGTTAACAG

               501    -    551
UN21434        --> GTTGAACAAAACAAAGGTTGAGAGAACCCC-TGATCTGAGAGCCGAGAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV529399       <-- GTTGAACAAAACAAAGGTTGGGAGAACCCC-TGATCTGAGAGCCGAGAGA
FD583313       <-- GTTGAACAAAACAAAGGTTGAGAGAACCCC-TGATTTGAGAGCCGAGAGA
EW722005       <-- GTTGAACAAAACAAAGGTTGAGAGAACCCC-TGATCTGAGAGCCGAGAGA
EX753020       <-- GTTGAACAAAACAAAGGTTGAGAGAACCCC-TGATCTGAGAGCCGAGAGA
FD530956       <-- GTTGAACAAAACAAAGGTTGAGAGAACCCC-TGATTTGAGAGCCGAGAGA
FD537688       <-- GTTGAACAAAACAAAGGTTGAGAGAACCCC-TGATCTGAGAGCCGAGAGA
EY909223       <-- GTTGAACAAAACAAAGGTTGAGAGAACCCC-TGATTTGAGAGCCGAGAGA
EX767886       <-- GTTGAACAAAACAAAGGTTGAGAGAACCCC-TGATTTGAGAGCCGAGAGA
FD567268       <-- GTTGAACAAAACAAAGGTTGAGAGAACCCC-TGATTTGAGAGCCGAGAGA
FD584037       <-- GTTGAACAAAACAAAGGTTGAGAGAACCCC-TGATCTGAGAGCCGAGAGA
EY894570       <-- GTTGAACAAAACAAAGGTTGAGAGAACCCC-TGATCTGAGAGCCGAGAGA
FD961460       <-- GTTGAACAAAACAAAGGTTGAGAGAACCCC-TGATTTGAGAGCCGAGAGA
FD545177       <-- GTTGAACAAAACAAAGGTTGAGAGAACCCC-TGGTCTGAGAGCCGAGAGA
FD566614       <-- ..................................................
EX749283       --> GTTGAACAAAACAAAGGTTGAGAGAACCCC-TGATCTGAGAGCCGAGAGA
EV525977       --> GTTGAACAAAACAAAGGTTGAGAGAACCCC-TGATCTGAGAGCCGAGAGA
EY912894       --> GTTGAACAAAACAAAGGTTGAGAGAACCCC-TGATCTGAGAGCCGAGAGA
FD535259       --> GTTGAACAAAACAAAGGTTGAGAGAACCCC-TGATCTGAGAGCCGAGAGA
FD579303       --> ..................................................
FD965831       --> GTTGAACAAAACAAAGGTTGAGAGAACCCC-TGATCTGAGAGCCGAGAGA
FD549085       --> ..................................................
EW718258       --> GTTGAACAAAACAA-GGTTGAGAGAACCCC-TGATCTGAGAGCCGAGAGA
EV524396       --> GTTGAACAAAACAAAGGTTGGGAGAACCCCCTGATCTGAGAGCCGAGAGA
EY898539       --> GTTGAACAAAACAAAGGTTGAGAGAACCCC-TGATCTGAGAGCCGAGAGA

               551    -    601
UN21434        --> GAAGCAGTGAACGCTGCAGAAAGAGCTGAGAGGAAGCAGCATCTCAGGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV529399       <-- GAAGCAGTGAACGCTGCAGAAAGAGCTGAGAGGAAGCAGCATCTCAGGGA
FD583313       <-- GAAGCAGTGAACGCTGCAGAAAGAGCTGAGAGGAAGCAGCATCTCAGGGA
EW722005       <-- GAAGCAGTGAACGCTGCAGAAAGAGCTGAGAGGAAGCAGCATCTCAGGGA
EX753020       <-- GAAGCAGTGAACGCTGCAGAAAGAGCTGAGAGGAAGCAGCATCTCAGGGA
FD530956       <-- GAAGCAGTGAACGCTGCAGAAAGAGCTGAGAGGAAGCAGCATCTCAGGGA
FD537688       <-- GAAGCAGTGAATGCTGCAGAAAGAGCTGAGAGGAAGCATCATCTCAGGGA
EY909223       <-- GAAGCAGTGAACGCTGCAGAAAGAACTGAGAGGAAGCAGCATTTCAGGGA
EX767886       <-- GAAGCAGTGAACGCTGCAGAAAGAGCTGAGAGGAAGCAGCATTTCAGGGA
FD567268       <-- GAAGCAGTGAACGCTGCAGAAAGAGCTGAGAGGAAGCAGCATTTCAGGGA
FD584037       <-- GAAGCAGTGAACGCTGCAGAAAGAGCTGAGAGGAAGCAGCATTTCAGGGA
EY894570       <-- GAAGCAGTGAACGCTGCAGAAAGAGCTGAGAGGAAGCAGCATCTCAGGGA
FD961460       <-- GAAGCAGTGAACGCTGCAGAAAGAGCTGAGAGGAGGCAGCATTTCAGGGA
FD545177       <-- GAAGCAGTGAACGCTGCAGAAAGAGCTGAGAGGAAGCAGCATCTCAGGGA
FD566614       <-- ............................AGAGGAAGCAGCATCTCAGGGA
EX749283       --> GAAGCAGTGAACGCTGCAGAAAGAGCTGAGAGGAAGCAGCATCTCAGGGA
EV525977       --> GAAGCAGTGAACGCTGCAGAAAGAGCTGAGAGGAAGCAGCATCTCAGGGA
EY912894       --> GAAGCAGTGAACGCTGCAGAAAGAACTGAGAGGAAGCAGCATC.......
FD535259       --> GAAGCAGTGAACGCTGCAGAAAGAGCTGAGAGGAAGCAGCATC.......
FD579303       --> ..................................................
FD965831       --> GAAGCAGTGAACGCTGCAGAAAGAGCTGAGAGGAGGCAGCATCTCAGGGA
FD549085       --> ..................................................
EW718258       --> GAAGCAGTGAACGCTGCAGAAAGAGCTGAGAGGAAGCAGCATCTCAGGGA
EV524396       --> GAAGCAGTGAACGCTGCAGAAAGAGCTGAGAGGAAGCAGCATCTCAGGGA
EY898539       --> GAAGCAGTGAACGCTGCAGAAAGAGCTGAGAGGAAGCAGCATCTCAGGGA

               601    -    651
UN21434        --> GAAGAAGAAACGTGAAGAGATAGAGAGGCTGGAGAAGGAGAGGCAAGCAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV529399       <-- GAAGAAGAAACGTGAAGAGATAGAGAGGCTGGAGAAGGAGAGGCAAGCAG  Raphanus raphanistrum subsp. maritimus
FD583313       <-- GAAGAAGAAGCGTGAAGAGATAGAGAGGCTGGAGAAGGAGCGGCAAGCAG  Raphanus sativus cv Rat-Tail Radish #3870
EW722005       <-- GAAGAAGAAGCGTGAAGAGATAGAGAGGCTGGAGAAGGAGCGGCAAGCAG  Raphanus sativus var. oleiformis
EX753020       <-- GAAGAAGAAACGTGAAGAGATAGAGAGGCTGGAGAAGGAGAGGCAAGCAG  Raphanus raphanistrum subsp. maritimus
FD530956       <-- GAAGAAGAAACGTGAAGAGATAGAGAGGCTGGAGAAGGAGAGGCAAGCAG  Raphanus raphanistrum subsp. maritimus
FD537688       <-- GAAGAAGAAACGTGAAGACATAGAGAGGCTGGAGAAGGAGAGGCAAGCAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY909223       <-- GAAGAAGAAACGTGAAGAGATAGAGAGGCTGTAGAAGGAGAGGCAAGCAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX767886       <-- GAAGAAGAAACGTGAAGAGATAGAGAGGCTGGAGAAGGAGAGGCAAGCAG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD567268       <-- GAAGAAGAAGCGTGAAGAGATAGAGAGGCTGGAGAAGGAGCGGCAAGCAG  Raphanus sativus var. oleiformis
FD584037       <-- GAAGAAGAAGCGTGAAGAGATAGAGAGGCTGGAGAAGGAGCGGCAAGCAG  Raphanus sativus cv Rat-Tail Radish #3870
EY894570       <-- GAAGAAGAAACGTGAAGAGATAGAGAGGCTGGAGAAGGAGAGGCAAGCAG  Raphanus raphanistrum subsp. maritimus
FD961460       <-- GAAGAAGAAACGTGAAGAGATAGAGAGGCTGGAGAAGGAGAGGCAAGCAG  Raphanus raphanistrum subsp. maritimus
FD545177       <-- GAAGAAGAAACGTGAAGAGATAGAGAGGCTGGAGAAGGAGAGGCAAGCAG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD566614       <-- GAAGAAGAAGCGTGAAGAGATAGAGAGGCTGGAGAAGGAGCGGCAAGCAC  Raphanus sativus var. oleiformis
EX749283       --> GAAGAAGAAACGTGAAGAGATAGAGAGGCTGGAGAAGGAGAGGCAAGCAG  Raphanus raphanistrum subsp. maritimus
EV525977       --> GAAGAAGAAACGTGAAGAGATAGAGAGGCTGGAGAAGGAGAGGCAAGCAG  Raphanus raphanistrum subsp. maritimus
EY912894       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD535259       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD579303       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD965831       --> GAAGAAGAAACGTGAAGAGATAGAGAGGCTGGAGAAGGAGAGGCAAGCAG  Raphanus raphanistrum subsp. maritimus
FD549085       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EW718258       --> GAAGAAGAAGCGTGAAGAGATAGAGAGGCTG...................  Raphanus sativus var. oleiformis
EV524396       --> GAAGAAGAAACGTGAAGAGATAGAGAGGCTGGAGAAGGAGAGGCAAGCAG  Raphanus raphanistrum subsp. maritimus
EY898539       --> GAAGAAGAAACGTGAAGAGATAGAGAGGCTGGAGAAGGAGAGGCAAGCAG  Raphanus raphanistrum subsp. maritimus

               651    -    701
UN21434        --> AGATGAGGAGTTACAA-GGGACTGATGGTAACTGATAAAATGACATCCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV529399       <-- AGATGAGGAGTTACAA-GGGACTGATGGTAACTGATAAAATGACATCCAA  Raphanus raphanistrum subsp. maritimus
FD583313       <-- AGATGAGGAGCTACAA-GGGACTGATGGTAACTGATAAAATGACATCCAA  Raphanus sativus cv Rat-Tail Radish #3870
EW722005       <-- AGATGAGGAGCTACAA-GGGACTGATGGTAACTGATAAAATGACATCCAA  Raphanus sativus var. oleiformis
EX753020       <-- AGATGAGGAGTTACAA-GGGACTGATGGTAACTGATAAAATGACATCCAA  Raphanus raphanistrum subsp. maritimus
FD530956       <-- AGATGAGGAGTTACAA-GGGACTGATGGTAACTGATAAAATGACATCCAA  Raphanus raphanistrum subsp. maritimus
FD537688       <-- AGATGAGGAGTTACAA-GGGACTGATGGTAACTGATAGAATGACATCCAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY909223       <-- AGATGAGGAGTTACAA-GGGACTGATGGTAACTGATAAAATGACATCCAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX767886       <-- AGATGAGGAGTTACAA-GGGACTGATGGTAACTGATAAAATGACATCCAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD567268       <-- AGATGAGGAGCTACAA-GGGACTGATGGTAACTGATAAAATGACATCCAA  Raphanus sativus var. oleiformis
FD584037       <-- AGATGAGGAGCTACAA-GGGACTGATGGTAACTGATAAAATGACATCCAA  Raphanus sativus cv Rat-Tail Radish #3870
EY894570       <-- AGATGAGGAGCTACAA-GGGACTGATGGTAACTGATAAAATGACATCCAA  Raphanus raphanistrum subsp. maritimus
FD961460       <-- AGATGAGGAGTTACAA-GGGACTGATGGTAACTGATAAAATGACATCCAA  Raphanus raphanistrum subsp. maritimus
FD545177       <-- AGATGAGGAGTTACAA-GGGACTGATGGTAACTGATAAAATGACATCCAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD566614       <-- AGATGAGGAGCTACAA-GGGACTGATGGTAACTGATAAAATGACATCCAA  Raphanus sativus var. oleiformis
EX749283       --> AGATGAGGAGTTACAA-GGGACTGATGGTAACTGATAAAATGACATCCAA  Raphanus raphanistrum subsp. maritimus
EV525977       --> AGATGAGGAGTTACAA-GGGACTGATGGTAACTGATAAAATGACATCCAA  Raphanus raphanistrum subsp. maritimus
EY912894       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD535259       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD579303       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD965831       --> AGATGAGGAGTTACAA-GG-ACTGATGGTAACTGATAAAATGACATCCAA  Raphanus raphanistrum subsp. maritimus
FD549085       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EW718258       --> ..................................................  Raphanus sativus var. oleiformis
EV524396       --> AGATGAGGAGTTACAA-GGGACTGATGGTAACTGATAAAATGACATCCAA  Raphanus raphanistrum subsp. maritimus
EY898539       --> AGATGAGGAGCTACAAAGGGACTGATGGTAACTGATAAAATGACATCCAA  Raphanus raphanistrum subsp. maritimus

               701    -    751
UN21434        --> CAAAGACATTGCTTCAAGCAACAAATCGCTTCAAGAACTCGAAGACGATT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV529399       <-- CAAAGACATTGCTTCAAGCAACAAATCGCTTCAAGAACTCGAAGACGATT  Raphanus raphanistrum subsp. maritimus
FD583313       <-- CAAGGGCATTGCTTCGAGCAACAAATCGCTTCAAGAACTCGAAGACGATT  Raphanus sativus cv Rat-Tail Radish #3870
EW722005       <-- CAAAGACATTGCTTCGAGCAACAAATCGCTTCAAGAACTCGAAGACGATT  Raphanus sativus var. oleiformis
EX753020       <-- CAAAGACATTGCTTCAAGCAACAAATCGCTTCAAGAACTCGAAGACGATT  Raphanus raphanistrum subsp. maritimus
FD530956       <-- CAAAGACATTGCTTCAAGCAACAAATCGCTTCAAGAACTCGAAGACGATT  Raphanus raphanistrum subsp. maritimus
FD537688       <-- CAAAGACATTGCTGCAAGCAACAAATCTCTTCAAGAACTCGAAGACGATT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY909223       <-- CAAAGACATTGCTTCAAGCAACAAATCGCTTCAAGAACTCGAAGACGATT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX767886       <-- CAAAGACATTGCTTCAAGCAACAAATCGCTTCAAGAACTCGAAGACGATT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD567268       <-- CAAAGACATTGCTTCGAGCAACAAATCGCTTCAAGAACTCGAAGACGATT  Raphanus sativus var. oleiformis
FD584037       <-- CAAAGACATTGCTTCGAGCAACAAATCGCTTCAAGAACTCGAAGACGATT  Raphanus sativus cv Rat-Tail Radish #3870
EY894570       <-- CAAAGACATTGCTTCAAGCAACAAATCGCTTCAAGAACTCGAAGACGATT  Raphanus raphanistrum subsp. maritimus
FD961460       <-- CAAAGACATTGCTTCAAGCAACAAATCGCTTCAAGAACTCGAAGACGATT  Raphanus raphanistrum subsp. maritimus
FD545177       <-- CAAAGACATTGCTTCAAGCAACAAATCGCTTCAAGAACTCGAAGACGATT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD566614       <-- CAAAGACATTGCTTCGAGCAACAAATCGCTTCAAGAACTCGAAGGCGATT  Raphanus sativus var. oleiformis
EX749283       --> CAAAGACATTGCTTCAAGCA-CAAATCGCTTCAAGA-CTCGAAGACGATT  Raphanus raphanistrum subsp. maritimus
EV525977       --> CAAAGACATTGCTTCAAGCAACAAATCGCTTCAAGAACTCGAAGACGATT  Raphanus raphanistrum subsp. maritimus
EY912894       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD535259       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD579303       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD965831       --> CAAAGACATTGCTTCAAGCAACAAATCGCTTCA-GAACTCGAAGACGATT  Raphanus raphanistrum subsp. maritimus
FD549085       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EW718258       --> ..................................................  Raphanus sativus var. oleiformis
EV524396       --> CAAAGACATTGCTTCAAGCAACAAATCGCTTCAAGAACTCGAAGACGATT  Raphanus raphanistrum subsp. maritimus
EY898539       --> CAAAGACATTGCTTCAAGCAACAAATCGCTTCAAGAACTCGAAGACGATT  Raphanus raphanistrum subsp. maritimus

               751    -    801
UN21434        --> TCATGTAAAACTCTGATTTGGTTCTTAAAGACTCTTTCGTCCCATTGAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV529399       <-- TCATGTAAAACTCTGATTTGGTTCTTAAAGACTCTTTCGTCCCATTGAAA
FD583313       <-- TCATGTAAAACTTTGATTTGGTTTTTAAAGACTCTTTCGTCCCATTGAAA
EW722005       <-- TCATGTAAAACTCTGATTTGGTTCTTAAAGACTCTTTCGTCCCATTGAAA
EX753020       <-- TCATGTAAAACTCTGATTTGGTTCTTAAAGACTCTTTCGTCCCATTGAAA
FD530956       <-- TCATGTAAAACTTTGATTTGGTTTTTAAAGACTCTTTCGTCCCATTGAAA
FD537688       <-- TCATGTAAAACTCTGATTTGGTTCTTAAAGACTCTTTCGTCCCATTGAAA
EY909223       <-- TCATGTAAAACTTTGATTTGGTTTTTAAAGACTCTTTCGTCCCATTGAAA
EX767886       <-- TCATGTAAAACTCTGATTTGGTTCTTAAAGACTCTTTCGTCCCATTGAAA
FD567268       <-- TCATGTAAAACTCTGATTTGGTTCTTAAAGACTCTTTCGTCCCATTGAAA
FD584037       <-- TCATGTAAAACTTTGATTTGGTTCTTAAAGACTCTTTCGTCCCATTGAAA
EY894570       <-- TCATGTAAAACTCTGATTTGGTTCTTAAAGACTCTTTCGTCCCATTGAAA
FD961460       <-- TCATGTAAAACTTTGATTTGGTTTTTAAAGACTCTTTCGTCCCATTGAAA
FD545177       <-- TCATGTAAAACTTTGATTTGGTTTTTAAAGACTCTTTCGTCCCATTGAAA
FD566614       <-- TCATGTAAAACTCTGATTTGGTTTTTAAAGACTCTTTCGTCCCATTGAAA
EX749283       --> TCATGTAAA-CTCTGATTTG..............................
EV525977       --> TCATGTAAAACTCTGATTTGGTTCTTAAAGACTCTTTCGTCCCATTGAAA
EY912894       --> ..................................................
FD535259       --> ..................................................
FD579303       --> ..................................................
FD965831       --> TCATGTAAA-CTCTGATTTGGTTCT-AAAGACTCTTTCGTCCCATTGAA-
FD549085       --> ..................................................
EW718258       --> ..................................................
EV524396       --> TCATGTAAA-CTCTGATTTGGTTCTTAAAGACTCTTTCGTCCCATTGAAt
EY898539       --> TCATGTAAA-CTCTGATTTGGTTCTTAAAGACTCTTTCGTCC-ATTGAAA

               801    -    851
UN21434        --> TGTTTCAGAGGATTGAGTCTTTGAGTTGTGAGGAAAAAAAAA-CAGAGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV529399       <-- TGTTTCAGAGGATTGAGTCTTTGAGTTGTGAGGAAAAAAAAA-CAGAGAG
FD583313       <-- TGTTTCAGAGGATTGAGTCTTTGAGTTGTGAGGAAAAAAAA--CAGAGAG
EW722005       <-- TGTTTCAGAGGATTGAGTCTTTGAGTTGTGAGGAAAAAAAAA-CAGAGAG
EX753020       <-- TGTTTCAGAGGATTGAGTCTTTGAGTTGTGAGGAAAAAAAAA-CAGAGAG
FD530956       <-- TGTTTCAGAGGATTGAGTCTTTGAGTTGTGAGGAAAAAAAAA-CAGAGAG
FD537688       <-- TGTTTCAGAGGATTGAGTCTTTGAGTTGTGAGGAAAAAAAAA-CAGAGAG
EY909223       <-- TGTTTCAGAGGATTGAGTCTTTGAGTTGTGAGGAAAAAAAAA-CAGAGAG
EX767886       <-- TGTTTCAGAGGATTGAGTCTTTGAGTTGTGAGGAAAAAAAAAACAGAGAG
FD567268       <-- TGTTTCAGAGGATTGAGTCTTTGAGTTGTGAGGAAAAAAAAA-CAGAGAG
FD584037       <-- TGTTTCAGAGGATTGAGTCTTTGAGTTGTGAGGAAAAAAAAA-CAGAGAG
EY894570       <-- TGTTTCAGAGGATTGAGTCTTTGAGTTGTGAGGAAAAAAAAA-CAGAGAG
FD961460       <-- TGTTTCAGAGGATTGAGTTTTTGAGTTGTGAGGAAAAAAAAA-CAGAGAG
FD545177       <-- TGTTTCAGAGGATTGAGTTTTTGAGTTGTGAGGAAAAAAAAA-CAGAGAG
FD566614       <-- TGTTTCAGAGGATTGAGTCTTTGAGTTGTGAGGAAAAAAAA--CAGAGAG
EX749283       --> ..................................................
EV525977       --> TGTTTCAGAGGATTGAGTCTTTGAGTTGTGAGG.................
EY912894       --> ..................................................
FD535259       --> ..................................................
FD579303       --> ..................................................
FD965831       --> TGTTTCAGAGGAT-GAGTCTTTGAGTTGTGAGGA................
FD549085       --> ..................................................
EW718258       --> ..................................................
EV524396       --> gtt...............................................
EY898539       --> TGTTTC............................................

               851    -    901
UN21434        --> CATTTACTCAGGTGATGCCATTGATTTGTTGCGATCATGGTTTACTCTAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV529399       <-- CATTTACTCAGGTGATGCCATTGATTTGTTGCGATCATGGTTTACTCTAC
FD583313       <-- CATTTACTCAGGTGATGCCATTGATTTGTTGCGATCATGGTTTACTCTAC
EW722005       <-- CATTTACTCAGGTGATGCCATTGATTTGTTGCGATCATGGTTTACTCTAC
EX753020       <-- CATTTACTCAGGTGATGCCATCGATTTGTTGCGATCATGGTTTACTCTAC
FD530956       <-- CATTTACTCAGGTGATGCCATTGATTTGTTGCGATCATGGTTTACTCTAC
FD537688       <-- CATTTACTCAGGTGATGCCATTGATTTGTTGCGATCATGGTTTACTCTGC
EY909223       <-- CATTTACTCAGGTGATGTCATTGATTTGTTGCGATCATGGTTTACTCTAC
EX767886       <-- CATTTACTCAGGTGATGCCATTGATTTGTTGCGATCATGGTTTACTCTAC
FD567268       <-- CATTTACTCAGGTGATGCCATTGATTTGTTGCGATCATGGTTTACTCTAC
FD584037       <-- CATTTACTCAGGTGATGCCATTGATTTGTTGCGATCATGGTTTACTCTAC
EY894570       <-- CATTTACTCAGGTGATGCCATTGATTTGTTGCGATCATGGTTTACTCTAC
FD961460       <-- CATTTACTCAGGTGATGC--CTGATTTGTTGCGATCATGGTTTACTTTAC
FD545177       <-- CATTTACTCAGGTGATGCCATTGATTTGTTGCGATCATGGTTTACTCTAC
FD566614       <-- CATTTACTCAGGTGATGCCATTGATT-GTTGCGATCATGGTTTACTCTAC
EX749283       --> ..................................................
EV525977       --> ..................................................
EY912894       --> ..................................................
FD535259       --> ..................................................
FD579303       --> ..................................................
FD965831       --> ..................................................
FD549085       --> ..................................................
EW718258       --> ..................................................
EV524396       --> ..................................................
EY898539       --> ..................................................

               901    -    951
UN21434        --> CTTGCTGTGTTTGTTGAAAATCATTTTACCACTCTTATATTTTTATCCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV529399       <-- CTTGCTGTGTTTGTTGAAAAgc............................
FD583313       <-- CTTGCTGTGTTTGTTGAAAATCATTTTACCCCTCTTATATTTTTATCCTT
EW722005       <-- CTTGCTGTGTTTGTTGAAAATCATTTTACCACTCTTATATTTTTATCCTT
EX753020       <-- CTTGCTGTGTTTGTTGAAAATCATTTTACCACTCTTATATTTTTATCCTT
FD530956       <-- CTTGCTGTGTTTGTTGAAAATCATTTTACCACTCTTATATTTTTATCCTT
FD537688       <-- CTTGCTGTGTTTGTTGAAAATCATTTTACCACTCTTATATTTTTATCCTT
EY909223       <-- CTTGCTGTGTTTGTTGAAAACCATTTTACCACTCTTATATTTTTATCCTT
EX767886       <-- CTTGCTGTGTTTGTTGAAAATCATTTTACCACTCTTATATTTTTATCCTT
FD567268       <-- CTTGCTGTGTTTGTTGAAAATCATTTTACCACTCTTATATTTTTATCCTT
FD584037       <-- CTTGCTGTGTTTGTTGAAAATCATTTTACCACTCTTATATTTTTATCCTT
EY894570       <-- CTTGCTGTGTTTGTTGAAAATCATTTTACCACTCTTATATTTTTATCCTT
FD961460       <-- CTTGCTGTGTTTGTTGAAAATCATTTTACCACTTTTATATTTTTATCCTT
FD545177       <-- CTTGCTGTGTTTGTTGAAAATCATTTTACCACTCTTATATTTTTATCCTT
FD566614       <-- CTTGCTGTGTTTGTTGAAAATCATTTTACCACTCTTATATTTTTATCCTT
EX749283       --> ..................................................
EV525977       --> ..................................................
EY912894       --> ..................................................
FD535259       --> ..................................................
FD579303       --> ..................................................
FD965831       --> ..................................................
FD549085       --> ..................................................
EW718258       --> ..................................................
EV524396       --> ..................................................
EY898539       --> ..................................................

               951    -   1001
UN21434        --> TTACATTTTATCCCAAAATTAATTTACATACAAGGTAACCTCGCTTCGTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV529399       <-- ..................................................
FD583313       <-- TTgcg.............................................
EW722005       <-- TTACATTTTATCCCAAAATTAATTTACATACAAGGTAACCTCGCTTCGTA
EX753020       <-- TTACATTTTATCCCAAAATTAATTTACATACAAGGTAACCTCGCTTCGTA
FD530956       <-- TTACATTTT.........................................
FD537688       <-- TTAC..............................................
EY909223       <-- TTACATT...........................................
EX767886       <-- TTACATTTTATCCCAAAATTAATTTACAc.....................
FD567268       <-- TTACATTTTATCCCAAAATTAATTTAC.......................
FD584037       <-- TTAC..............................................
EY894570       <-- TTAC..............................................
FD961460       <-- TT................................................
FD545177       <-- TTACgt............................................
FD566614       <-- TTACATTTT.........................................
EX749283       --> ..................................................
EV525977       --> ..................................................
EY912894       --> ..................................................
FD535259       --> ..................................................
FD579303       --> ..................................................
FD965831       --> ..................................................
FD549085       --> ..................................................
EW718258       --> ..................................................
EV524396       --> ..................................................
EY898539       --> ..................................................

               1001   -   1051
UN21434        --> TT
                   ~~
EV529399       <-- ..
FD583313       <-- ..
EW722005       <-- TT
EX753020       <-- TT
FD530956       <-- ..
FD537688       <-- ..
EY909223       <-- ..
EX767886       <-- ..
FD567268       <-- ..
FD584037       <-- ..
EY894570       <-- ..
FD961460       <-- ..
FD545177       <-- ..
FD566614       <-- ..
EX749283       --> ..
EV525977       --> ..
EY912894       --> ..
FD535259       --> ..
FD579303       --> ..
FD965831       --> ..
FD549085       --> ..
EW718258       --> ..
EV524396       --> ..
EY898539       --> ..