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Alignment for radish unigene UN21489

               1      -     51
UN21489        --> AATAAGCATATTCCGGGCCCTTTTTATTTGGTTGAGGCCCAATAAAAATT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX888258       <-- ..................................................
FD564687       <-- ..................................................
EX756335       <-- ..................................................
FD540157       <-- ..................................................
FD568107       --> AATAAGCATATTCCGG-CCCTTTTTATTTGGTTGAGGTCCAATAAAAATT
EX892225       --> ...gAGCATATTCCGGGCCCTTTTTATTTGGTTGAGGCCCAATACAAATT
FD536714       --> ...gAGCATATTCCGGGCCCTTTTTATTTGGTTGAGGCCCAATAAAAATT
EY933975       --> ............CCGGGCCCTTTTTATTTGGTTGAGGCCCAATACAAATT
EX760172       --> ...................................GGCCCAATAAAAATT

               51     -    101
UN21489        --> TATTATATCCAACAGAAATCTCACTCAAACTTTAGTCCCATTCAAAAACT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX888258       <-- ..................................................
FD564687       <-- ..................................................
EX756335       <-- ..................................................
FD540157       <-- ..................................................
FD568107       --> TATTATATCCAACAGAAATCTCACTCAAACTCTAGTCCCATTCAAAAACT
EX892225       --> TATTATATCCAACAGAAATCTCACTCAAACTTTAGTCCCATTCAAAAACT
FD536714       --> TATTATATCCAACAGAAATCTCACTCAAACTTTAGTCCCATTCAAAAACT
EY933975       --> TATTATATCCAACAGAAATCTCACTCAAACTTTAGTCCCATTCAAAAACT
EX760172       --> -ATTATATCCAACAGAAATCTCACTCAAACTTTAGTCCCATTCAAAAACT

               101    -    151
UN21489        --> GGAATGGATCGATGGTTTAATGTGAATGGTCCATGAGAGGAAACAAAGGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX888258       <-- ..................................................
FD564687       <-- ..................................................
EX756335       <-- ..................................................
FD540157       <-- ..................................................
FD568107       --> GGAATGGATCGATG-ATTAATGTGAATGGTCCATGAGAGGAAACAAAGGC
EX892225       --> GGAATGGATCGATGGTTTAATCTGAATGGTCCATGAGAGGAAACAAAGGC
FD536714       --> GGAATGGATCGATGGTTTAATGTGAATGGTCCATGAGAGGAAACAAAGGC
EY933975       --> GGAATGGATCGATGGTTTAATGTGA-TGGTCCATGAGAGGAAACAAAGGC
EX760172       --> GGAATGGATCGATGGTTTAATGTGAATGGTCCATGAGAGGAAACAAAGGC

               151    -    201
UN21489        --> AAGCCTCAAGGTCTGGGCTTGTGCAGACAAGGCCTGTTGCAAAAGATCCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX888258       <-- ..................................................
FD564687       <-- ..................................................
EX756335       <-- ..................................................
FD540157       <-- ..................................................
FD568107       --> AAGCCTCAAGGTCTGGGCTTGTGCAAACAAGGCCTGTTGCAAAAAATCCG
EX892225       --> AAGCCTCAAGGTCTGGGCTTGTGCAGACGAGGCCTGTTGCAAAAGATCCG
FD536714       --> AAGCCTCAAGGTCTGGGCTTGTGCAGACAAGGCCTGTTGCAGAAGATCCG
EY933975       --> AAGCCTCAAGGTCTGGGCTTGTGCAGACGAGGCCTGTTGCAAAAGATCCG
EX760172       --> AAGCCTCAAGGTCTGGGCTTGTGCAGACAAGGCCTGTTGCAGAAGATCCG

               201    -    251
UN21489        --> GCCATTGGCCCTCATGAATGCTGTGACAGCCACACTGATGCCCGCCCACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX888258       <-- ..................................................
FD564687       <-- ..................................................
EX756335       <-- ..................................................
FD540157       <-- ..................................................
FD568107       --> GCCATTGGCCCTCATGAATGCTGCTACAGCCACACTGATGCCCGCCCACA
EX892225       --> GCCATTGGCCCTCATGAATGCTGTGACAGCCACACTGATGCCCGCCCACA
FD536714       --> GCCATTGGCCCTCATGAATGCTGCGACAGCCACACTGATGCCCGCCCACA
EY933975       --> GCCATTGGCCCTCATGAATGCTGCGACAGCCACACTGATTCCCGCCCACA
EX760172       --> GCCATTGGCCCTCATGAATGCTGAGACAGCCACACTGATGCCCGCCCACA

               251    -    301
UN21489        --> CCAATGAGAAAAACAAGTGCTTGTAATCGCTCCCAGCTCGTTTCACAGAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX888258       <-- ..................................................
FD564687       <-- ..................................................
EX756335       <-- ..................................................
FD540157       <-- ..................................................
FD568107       --> CCAATGAAAAAAACAAGTGCTTGTAATCGCTCCCAGCTCGTTTCACAGAC
EX892225       --> CCAATGAGAAAAACAAGTGCTTGTAATCGCTCCCAGCTCGTTTCACAGAC
FD536714       --> CCAATGAGAAAAACAAGTGCTTGTAATCGCTCCCAGCTCGTTTCACAGAC
EY933975       --> CCAATGGGAAAAACAAGTGCTTGTAATCGCTCCCAGCTCGTTTCACAGAC
EX760172       --> CCAATGAGAAAAACAAGTGCTTGTAATCGCTCCCAGCTCGTTTCACAGAC

               301    -    351
UN21489        --> ATTGTTGCAAACCATAAACTGATCAGAACCACGGCCAATGCCACTGGAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX888258       <-- ..................................................
FD564687       <-- ..................................................
EX756335       <-- ..................................................
FD540157       <-- ..................................................
FD568107       --> ATTGTTGCAAACCATAAACTGATCAGAACCACGGCCAATGCCACTGGAAA
EX892225       --> ATGGTTGCAAACCATAAACTGATCAGAACAACAGCCAATGCCACTGGAAA
FD536714       --> ATTGTTGCAAACCATAAACTGATCAGAACCACGGCCAATGCCACTGGAAA
EY933975       --> ATTGTTGTAAACCATAAACTGATCAGAACAACAGCCAATGCCAATGGAAA
EX760172       --> ATTGTTGCAAACCATAAACTGATCAGAACCACGGCCAATGCCACTGGAAA

               351    -    401
UN21489        --> GTTGGCTACAGCCTCGAGACCTCCCTTTCGAGGCACAGGAGCCATGTCTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX888258       <-- ........................CTTTCGGGGCACAGGAGCCATGTCTC
FD564687       <-- ..................................................
EX756335       <-- ..................................................
FD540157       <-- ..................................................
FD568107       --> GTTGGCTACAGCCTCGAGACCTCCCTTTCGAGGCACAGGAGCCATGTCTC
EX892225       --> GTTGGCTACAGCCTCGAGACCTCCCTTTCGGGGCACAGGAGCCATGTCTC
FD536714       --> GTTGGCTACAGCCTCGAGACCTCCCTTTCGAGGCACAGGAGCCATGTCTC
EY933975       --> GTTGGCTACAGCCTCGAGACCTCCCTTTCGAGGCACAGGAGCCATGTCTC
EX760172       --> GTTGGCTACAGCCTCGAGACCTTCCTTTCGAGGCACAGGAGCCATGTCTC

               401    -    451
UN21489        --> GGTTCACAGCAACTATATAGTGTCCTTGCACAAGATCAATCGCATCCTGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX888258       <-- GGTTCACAGCAACTATATAGTGTCCTTGCACAAGATCAATCGCGTCGTGC
FD564687       <-- ..................................................
EX756335       <-- ..................................................
FD540157       <-- ..................................................
FD568107       --> GGTTCACAGCAACTATATAGTGTCCTTGCACAAGATCAATCGCATCCTGC
EX892225       --> GGTTCACAGCAACTATATAGTGTCCTTGCACAAGATCAATCGCGTCCTGC
FD536714       --> GGTTAACAGCAACTATATAGTGTCCTTGCACAAGATCAATCGCATCCTGC
EY933975       --> GGTTCACAGCAACTATATAGTGTCCTTGCACAAGATCAATCGCATCCTGC
EX760172       --> GGTTAACAGCAACTATATAGTGTCCTTGCACAAGATCAATCGCATCCTGC

               451    -    501
UN21489        --> TTAGTTCCATCAGCAAAGTTGTTCAGGTAGTAGCGGGCGAGGGCATTCCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX888258       <-- TTAGTTCCATCAGCAAAGTTGTTCAGGTAGTAGCGTGCGAGGGCATTCCA
FD564687       <-- ..............agcaagtgTCAGGTAGTAGCGG-CGAGGGCAT-CCA
EX756335       <-- ..................................................
FD540157       <-- ..................................................
FD568107       --> TTAGTTCCATCAGCAAAGTTGTTCAGGTAGTAGCGGGCGAGGGCATTCCA
EX892225       --> TTAGTTCCATCAGCAAAGTTGTTCAGGTAGTAGCGTGCGAGGGCATTCCA
FD536714       --> TTAGTTCCATCAGCAAAGTTGTTCAGGTAGTAGCGGGCGAGGGCATTCCA
EY933975       --> TTAGTTCCATCAGCAAAGTTGTTCAGGTAGTAGCGGGCGAGGGCATTCCA
EX760172       --> TTAGTTCCATCAGCAAAGTTGTTCAGGTAGTAGCGGGCGAGGGCATTCCA

               501    -    551
UN21489        --> GCCATCATTAAGGATCCCTTGAACAGTCCTTCGACCATACCTGACAAAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX888258       <-- GCCATCATTAAGGATCCCTTGAACAGTCCTTCGACCATACCTGACAAAAT
FD564687       <-- GCCATTATTAAGGATCC-TTGAACAGTC-TTCGACCATAC-TGACAAAAT
EX756335       <-- ..................................................
FD540157       <-- ..................................................
FD568107       --> GCCATTATTAAGGATCCCTTGAACAGTCCTTCGACCATACCTGACAAAAT
EX892225       --> GCCATCATTAAGGATCCCTTGAACAGTCCTTCGACCATACCTGACAAAAT
FD536714       --> GCCATCATTAAGGATCCCTTGAACAGTCCTTCGACCATACCTGACAAAAT
EY933975       --> GCCATCATTAAGGATCCCTTGAACAGTCCTTCGACCATACCTGACAAAAT
EX760172       --> GCCATCATTAAGGATCCCTTGAACAGTCCTTCGAC-ATACCTGACAAAAT

               551    -    601
UN21489        --> CTCCTTTAAGTGCAGGAGTGCCGGAGTACTGAATGCTAATGTCGTCACCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX888258       <-- CTCCTTTAAGTGCAGGAGTGCCGGAGTACTGAATGCTAATGTCGTCACCG
FD564687       <-- CTC-TTTAAGTGCAGGAGTGCGGGAGTACTGAATGCTAATGTCGTCACCG
EX756335       <-- ..................................................
FD540157       <-- ..................................................
FD568107       --> CTCCTTTAAGTGCAGGAGTGCCGGAGTACTGAATGCTAATGTCGTCACCG
EX892225       --> CTCCTTTAAGTGCAGGAGTGCCGGAGTACTGAATGCTAATGTCGTCACCG
FD536714       --> CTCCTTTAAGTGCAGGAGTGCCGGAGTACTGAATGCTAATGTCGTCACCG
EY933975       --> CTCCTTTAAGTGCAGGAGTGCCGGAGTACTGAATGCTAATGTCGTCACCG
EX760172       --> CTCCTTTAAGTGCAGGAGTGCCGGAATACTGAATGCTAATGTCGTCACCG

               601    -    651
UN21489        --> TGATTAGCCCATAATATTTTATAGCGCTCGTCAAAATTAGGATGCGAGCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX888258       <-- TGATTAGCCCATAATATTTTATAGCGCTCGTCAAAATTAGGATGCGAGCT  Raphanus sativus var. oleiformis
FD564687       <-- TGATTAGCCCATAA--TTTTATAGCGCTCGTCAAAATTAGGATGCGAGCT  Raphanus sativus var. oleiformis
EX756335       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD540157       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD568107       --> TGATTAGCCCATAAT--TTTATAGCGCTCGTCAAAATTAGGATGCGAGCT  Raphanus sativus var. oleiformis
EX892225       --> TGATTAGCCCATAATATTTTATAGCGCTCGTCAAAATTAGGATGCGAGCT  Raphanus sativus var. oleiformis
FD536714       --> TGATTAGCCCATAATATTTTATAGCGCTCGTCAAAATTAAGATGCGAGCT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY933975       --> TGATTAGCCCATAATATTTTATAGCGGTCGTCAAAGTTTAGGTGCGAGCT  Raphanus sativus cv Early Scarlet Globe
EX760172       --> TGATTAGCCCATAATATTTTATAGCGCTCGTCAAAATTAAGATGCGAGCT  Raphanus raphanistrum subsp. raphanistrum (MS)

               651    -    701
UN21489        --> TATAACTTCTTCGGCCCCAAAAACACCAATCCTTCTGAGTTGAAGTTCCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX888258       <-- TATAACTTCTTCGGCCCCAAAAACGCCAATCCTTCTGAGTTGAAGTTCCA
FD564687       <-- TATAACTTCTTCGGCCCCAAAAACACCAATCCTTCTGAGTTGAAGTTCCA
EX756335       <-- ..................................................
FD540157       <-- ..................................................
FD568107       --> TATAACTTCTTCGGCCCCAAAAACACCAATCCTTCTGAGTTGAAGTTCCA
EX892225       --> TATAACTT..........................................
FD536714       --> TATAACTTCTTCGGCCCCAAAAACACCAATCCTTCTGAGTTGAAGTTCCA
EY933975       --> TATAACTTCTTCGGCCCCAAAAACACCAATCCTTCTGAGTTGAAGTTCCA
EX760172       --> TATAACTTCTTCGGCCCCAAAAACACCAATCCTTCTGAGTTGAAGTTCCA

               701    -    751
UN21489        --> GCATCTTGCGGCCTATCATGCTCTGCGTGACATTTGTACGGTCTAAACAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX888258       <-- GCATCTTGCGGCCTATCATGCTCTGCGTGACATTTGTACGGTCTAAACAA
FD564687       <-- GCATCTTGCGGCCTATCATGCTCTGCGTGACATTTGTACGGTCTAAACAA
EX756335       <-- ..................................................
FD540157       <-- ..................................................
FD568107       --> GCATCTTGCGGCCTATCATGCTCTGCGTGACATTTGTACGGTCTAAACAA
EX892225       --> ..................................................
FD536714       --> GCATCTTGCGGCCTATCGTGCTCTGCGTGACATTTGTACGGTCTAAACAA
EY933975       --> GCATCTTACGGCCTATCATGCTCTGCGTGACATTTGTACGGTCTAAACAA
EX760172       --> GCATCTTGCGGCCTATCATGCTCTGCGTGACATTTGTACGGTCTAAACAA

               751    -    801
UN21489        --> TCAATGCAGTTAGTGCGCACAATACCAGACTGCTCCTTCATTTTCTCACC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX888258       <-- TCAATGCAGTTAGTGCGCACAATACCAGACTGCTCCTTCATTTTCTCACC
FD564687       <-- TCAATGCAGTTAGTGAGCACAATACCAGACTGCTCCTTCATTTTCTCACC
EX756335       <-- ..................................................
FD540157       <-- ..................................................
FD568107       --> TCAATGCAGTTAGTGAGCACAATACCAGACTGCTCCTTCATTTTCTCACC
EX892225       --> ..................................................
FD536714       --> TCAATGCAGTTAGTGCGCACAATACCAGACTG..................
EY933975       --> TCTATGCAGTTAGTGCGCACAATACCAGACTGCTCCTTCATTTTCTCACC
EX760172       --> TCAATG-AGTTAGTGCGCACAATACCAGACTGCTC...............

               801    -    851
UN21489        --> CTTTTCATTCAACAAAAAGTACCCGCTTTTGTCAAGGAAATCCTCCATCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX888258       <-- CTTTTCATTCAACAAAAAGTACCCGCTTTTGTCAAGGAAATCCTCCATCT
FD564687       <-- CTTTTCATTCAACAAAAAGTACCCGCTTTTGTCAAGGAAATCCTCCATCT
EX756335       <-- ..................................................
FD540157       <-- ..................................................
FD568107       --> CTTT-CATTCAACAAAA-GTACCCGCTTTTGTCAAG-AAATCCTCCATCT
EX892225       --> ..................................................
FD536714       --> ..................................................
EY933975       --> CT................................................
EX760172       --> ..................................................

               851    -    901
UN21489        --> GCTCATACAGAATTGCTAAGCGTTCAAAGTGAATATGCCCACAGATGTGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX888258       <-- GCTCATACAGAATTGCTAAGCGTTCAAAGTGAATATGCCCACAGATATGA
FD564687       <-- GCTCATACAGAATTGCTAAGCGTTCAAAGTGAATATGCCCACAGATGTGA
EX756335       <-- ..................................................
FD540157       <-- ..................................................
FD568107       --> GCTCAT............................................
EX892225       --> ..................................................
FD536714       --> ..................................................
EY933975       --> ..................................................
EX760172       --> ..................................................

               901    -    951
UN21489        --> TGAAAATCAAAGTGCAGGTATCTTACATCATCGCCGTTGATGTGCTGCAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX888258       <-- TGAAAATCAAAGTGCAGGTATCTTACATCATCACCGTTGATGTGCTGCAT
FD564687       <-- TGAAAATCAAAGTGCAGGTATCTTACATCATCGCCGTTGATGTGCTGCAT
EX756335       <-- ..................................................
FD540157       <-- ..................................................
FD568107       --> ..................................................
EX892225       --> ..................................................
FD536714       --> ..................................................
EY933975       --> ..................................................
EX760172       --> ..................................................

               951    -   1001
UN21489        --> AGCACCTGCGAACCTCTCGCTTAAGCGCCCCTCACCTCCATGCTTATTGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX888258       <-- AGCACCTGCAAACCTCTCGCTTAAGCGCCCCTCACCTCCATGCTTATTGA
FD564687       <-- AGCACCTGCGAACCTCTCGCTTAAGCGCCCCTCACCTCCATGCTTATTGA
EX756335       <-- ................TCGCTTAAGCGCCCCTCACCTCCATGCTTATTGA
FD540157       <-- ..................................................
FD568107       --> ..................................................
EX892225       --> ..................................................
FD536714       --> ..................................................
EY933975       --> ..................................................
EX760172       --> ..................................................

               1001   -   1051
UN21489        --> CAAGATCAACAGCCAAAACTGATCCATATTTTTTCCTGAGGTCCAGAAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX888258       <-- CAAGATCAACAGCCAAAACTGATCCATATTTTTTCCTGAGGTACAGAAAG
FD564687       <-- CAAGATCAACAGCCAAAACTGATCCATATTTTTTCCTGAGGTCCAGAAAG
EX756335       <-- CAAGATCAACAGCCAAAACTGATCCATATTTT--TCTGAGGTCCAGAAAG
FD540157       <-- ..................................................
FD568107       --> ..................................................
EX892225       --> ..................................................
FD536714       --> ..................................................
EY933975       --> ..................................................
EX760172       --> ..................................................

               1051   -   1101
UN21489        --> TGACGCTCAGCTATCCTCGCAGCTTCTTCAGGTTGGACAATCTCAAACTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX888258       <-- TGACGCTCAGCTATCCTCGCAGCTTCTTCAGGTTGGACAATCTCAAACTT
FD564687       <-- TGACGCTCGGCTATCCTCGCAGCTTCTTCAGGTTGGACAATCTCAAACTT
EX756335       <-- TGACGCTCAGCTATCCCCGCAGCTTCTTCAGGTTGGACAATCTCAAACTT
FD540157       <-- ..................................................
FD568107       --> ..................................................
EX892225       --> ..................................................
FD536714       --> ..................................................
EY933975       --> ..................................................
EX760172       --> ..................................................

               1101   -   1151
UN21489        --> GGGCTTGTAGGTCAGATCAACAATTTGCTCCCACATAAAAGGCATGGATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX888258       <-- GGGCTTGTAGGTC.....................................
FD564687       <-- GGGCTTGTAGGTCAGATCAAAAATTTGCTCCCACATAAAAGGCATGGATC
EX756335       <-- GGGCTTGTAGGTCAGATCAACAATTTGCTCCCACATAAAAGGCATGGATC
FD540157       <-- ..................................................
FD568107       --> ..................................................
EX892225       --> ..................................................
FD536714       --> ..................................................
EY933975       --> ..................................................
EX760172       --> ..................................................

               1151   -   1201
UN21489        --> CTCTAATCTGAGTTAACGATGATGTGTATCCGTTCATCTGTACAATTTGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX888258       <-- ..................................................
FD564687       <-- CTCTAATCTGAGTTAACGATGATGTGTATCCGTTCATCTGTACAATTTGC
EX756335       <-- CTCTAATCTGAGTTAACGATGATGTGTATCCGTTCATCTGTACAATTTGC
FD540157       <-- ..................................................
FD568107       --> ..................................................
EX892225       --> ..................................................
FD536714       --> ..................................................
EY933975       --> ..................................................
EX760172       --> ..................................................

               1201   -   1251
UN21489        --> TCAGTCTCCACAAAATTAGCAACATAACCATCAGGGTCAGCTCCTCTCCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX888258       <-- ..................................................
FD564687       <-- TCAGTCTCCACAAAATTAGCAACATAACCATCAGGGTCc...........
EX756335       <-- TCAGTCTCCACAAAATTAGCAACATAACCATCAGGGTCAGCTCCTCTCCG
FD540157       <-- ..................................................
FD568107       --> ..................................................
EX892225       --> ..................................................
FD536714       --> ..................................................
EY933975       --> ..................................................
EX760172       --> ..................................................

               1251   -   1301
UN21489        --> CCACATGCGAGTACAATTTCTTCTGGTGCACCTCCTAGCAATCAGAGTAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX888258       <-- ..................................................
FD564687       <-- ..................................................
EX756335       <-- CCACATGCGAGTACAATTTCTTCTGGTGCACCTCCTAGCAATCAGAGTAA
FD540157       <-- ...........................gtgcactCTAGCAATCAGAGTAA
FD568107       --> ..................................................
EX892225       --> ..................................................
FD536714       --> ..................................................
EY933975       --> ..................................................
EX760172       --> ..................................................

               1301   -   1351
UN21489        --> TGTCAACAATATCTCTTCCTATGGCTGTTTGAAAACTATGGAAACTTCCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX888258       <-- ..................................................
FD564687       <-- ..................................................
EX756335       <-- TGTCAACAATATCTCTTCCTATGGCTGTTTGAAAACTATGGAAACTTCCT
FD540157       <-- TGTCAACAATATCTC--TCTATGGCTGTT-GAAAACTATGGAAACTTCCT
FD568107       --> ..................................................
EX892225       --> ..................................................
FD536714       --> ..................................................
EY933975       --> ..................................................
EX760172       --> ..................................................

               1351   -   1401
UN21489        --> TGAATTACTGGAAGCAAGAACTGATCAAGCTTATTATCGATAAGCACTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX888258       <-- ..................................................
FD564687       <-- ..................................................
EX756335       <-- TGAATTACTGGAAGCAAGAACTGATCAAGCTTATTATCGATAAGCACTTC
FD540157       <-- TGAATTACTGGAAGCAAGAACTGATCAAGCTTATTATCGATAAGCACTTC
FD568107       --> ..................................................
EX892225       --> ..................................................
FD536714       --> ..................................................
EY933975       --> ..................................................
EX760172       --> ..................................................

               1401   -   1451
UN21489        --> TAACATATAATTGTTCCAAAGAAATCGAGGCTCAGCCTGTCTCCACAGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX888258       <-- ..................................................
FD564687       <-- ..................................................
EX756335       <-- CAACATATAATTGTTCCAAAGAAATCGAGGCTCAGCCTGTCTCCACAGAG
FD540157       <-- TAACATATAATTGTTCCAAAGAAATCGAGGCTCAGCCTGTCTCCACAGAG
FD568107       --> ..................................................
EX892225       --> ..................................................
FD536714       --> ..................................................
EY933975       --> ..................................................
EX760172       --> ..................................................

               1451   -   1501
UN21489        --> GAAGTGACTTAGACTCATCCCCCCAGATCATGCAAGCGCTGTGCACTGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX888258       <-- ..................................................
FD564687       <-- ..................................................
EX756335       <-- GAAGTGACTTAGACTCATCCCCC-AGATCATGCAAGCGCTGTGCACTGAG
FD540157       <-- GAAGTGACTTAGACTCATCCCCCCAGATCATGCAAGCGCTGTGCACTGAG
FD568107       --> ..................................................
EX892225       --> ..................................................
FD536714       --> ..................................................
EY933975       --> ..................................................
EX760172       --> ..................................................

               1501   -   1551
UN21489        --> AGTCAAGTTAATTTCATATGAGAAGTAGAGACCATTTGTCCTCTCTGCGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX888258       <-- ..................................................
FD564687       <-- ..................................................
EX756335       <-- AGTCAAGTTAATTTCATATGAGAAGTAGAGACCATTTGTCCTCTCTGCGA
FD540157       <-- AGTCAAGTTAATTTCATATGAGAAGTAGAGACCATTTGTCCTCTCTGCGA
FD568107       --> ..................................................
EX892225       --> ..................................................
FD536714       --> ..................................................
EY933975       --> ..................................................
EX760172       --> ..................................................

               1551   -   1601
UN21489        --> CACTTAGCAGCCTAGAGAAGTCGGTCTCAACCTTTTTCTGTTCTTCAGGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX888258       <-- ..................................................
FD564687       <-- ..................................................
EX756335       <-- CACTTAGCAGCCTAGAGAAGTCGGTCTCAACCTTTTTCTGTTCTTCAGGC
FD540157       <-- CACTTAGCAGCCTAGAGAAGTCGGTCTCAACCTTTTTCTGTTCTTCAGGC
FD568107       --> ..................................................
EX892225       --> ..................................................
FD536714       --> ..................................................
EY933975       --> ..................................................
EX760172       --> ..................................................

               1601   -   1651
UN21489        --> GAGTTTTTAAGTGAATGATCACAAGGAAGAACCTTGAGTGAATTAATTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX888258       <-- ..................................................
FD564687       <-- ..................................................
EX756335       <-- GAGTTTTTAAGTGAATGATCACAAGGAAGAACCTTGAGTc..........
FD540157       <-- GAGTTTTTAAGTGAATGATCACAAGGAAGAACCTTGAGTGAATTAATTCT
FD568107       --> ..................................................
EX892225       --> ..................................................
FD536714       --> ..................................................
EY933975       --> ..................................................
EX760172       --> ..................................................

               1651   -   1701
UN21489        --> GAAAATGGGATGCCCCAGGAACGAGCCAACAGATTGGCTCTCTGTCACCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX888258       <-- ..................................................
FD564687       <-- ..................................................
EX756335       <-- ..................................................
FD540157       <-- GAAAATGGGATGCCCCAGGAACGAGCCAACAGATTGGCTCTCTGTCACCA
FD568107       --> ..................................................
EX892225       --> ..................................................
FD536714       --> ..................................................
EY933975       --> ..................................................
EX760172       --> ..................................................

               1701   -   1751
UN21489        --> CCACCAAGTATGATCCTGCCAGGAGCTTCAGCACCCCAACGACACCGAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX888258       <-- ..................................................
FD564687       <-- ..................................................
EX756335       <-- ..................................................
FD540157       <-- CCACCAAGTATGATCCTGCCAGGAGCTTCAGCACCCCAACGACACCGAAT
FD568107       --> ..................................................
EX892225       --> ..................................................
FD536714       --> ..................................................
EY933975       --> ..................................................
EX760172       --> ..................................................

               1751   -   1801
UN21489        --> ATGGAACGGATCTTAGGGACACGCAAAGAGTTGCATTCTGCGACTTGATA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX888258       <-- ..................................................
FD564687       <-- ..................................................
EX756335       <-- ..................................................
FD540157       <-- ATGGAACGGATCTTAGGGACACGCAAAGAGTTGCATTCTGCGACTTGATA
FD568107       --> ..................................................
EX892225       --> ..................................................
FD536714       --> ..................................................
EY933975       --> ..................................................
EX760172       --> ..................................................

               1801   -   1851
UN21489        --> AATGAGCTTCATGGAGCCGTCAAGACGACTAATGTCCAAGCATGGAGCGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX888258       <-- ..................................................
FD564687       <-- ..................................................
EX756335       <-- ..................................................
FD540157       <-- AATGAGCTTCATGGAGCCGTCAAGACGACTAATGTCCAAGCATGGAGCGG
FD568107       --> ..................................................
EX892225       --> ..................................................
FD536714       --> ..................................................
EY933975       --> ..................................................
EX760172       --> ..................................................

               1851   -   1901
UN21489        --> CCGAACCATCGGTCGGCTCGATAACGTACTGATCAGGAAATTCCCATAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX888258       <-- ..................................................
FD564687       <-- ..................................................
EX756335       <-- ..................................................
FD540157       <-- CCGAACCATCGGTCGGCTCGATAACGTACTGATCAGGAAATTCCCATAAA
FD568107       --> ..................................................
EX892225       --> ..................................................
FD536714       --> ..................................................
EY933975       --> ..................................................
EX760172       --> ..................................................

               1901   -   1951
UN21489        --> CGCAAGCCAGAGTGTAATCTGTGCCTAGGGGCCTCCATCTCCAACACAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX888258       <-- ..................................................
FD564687       <-- ..................................................
EX756335       <-- ..................................................
FD540157       <-- CGCAAGCCAGAGTGTAATCTGTGCCTAGGGGCCTCCATCTCCAACACAAC
FD568107       --> ..................................................
EX892225       --> ..................................................
FD536714       --> ..................................................
EY933975       --> ..................................................
EX760172       --> ..................................................

               1951   -   2001
UN21489        --> ACAACACAGGATCAAT
                   ~~~~~~~~~~~~~~~~
EX888258       <-- ................
FD564687       <-- ................
EX756335       <-- ................
FD540157       <-- ACAACACAGGATCAAT
FD568107       --> ................
EX892225       --> ................
FD536714       --> ................
EY933975       --> ................
EX760172       --> ................