RadishBase

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Alignment for radish unigene UN21490

               1      -     51
UN21490        --> ATTTATCATTGTTTATGTGGTAATTTATCATTGTCTAGAGAGTACACTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD556827       <-- ATTTATCATTGTTTATGTGGTAATTTATCATTGTCTAGAGAGTACACTTT
FD550953       <-- ..................................................
FD557790       <-- ..................................................
EV548032       <-- ..................................................
FY432034       <-- ..................................................
FY429985       <-- ..................................................
EY940478       <-- ..................................................
EW715827       <-- ..................................................
EW715710       <-- ..................................................
EX886885       <-- ..................................................
FD561430       <-- ..................................................
FD544339       <-- ..................................................
EX754570       <-- ..................................................
FD972277       <-- ..................................................
FD579953       <-- ..................................................
EW720329       --> ....ATCATTGTTTATGTGGTAATTTATCATTGTCTAGAGAGTACACTTT
FD546843       --> ..................................................
EY936232       --> ..................................................
EX891168       --> ..................................................
FD552909       --> ..................................................
FD565595       --> ..................................................
FD583839       --> ..................................................
EW719407       --> ..................................................

               51     -    101
UN21490        --> GAATATCTCAACAACATTCTTACCAAACTCTTAACATTCATT--ATTAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD556827       <-- GAATATCTCAACAACATTCTTACCAAACTCTTAACATTCATT--ATTAAA
FD550953       <-- ....ATCTCAACGACATTCTTACCAAACTCTTAACATTAATTTTATTAAA
FD557790       <-- ....ATCTCAACAACATTCTTACCAAACTCTTAACATTCATT--ATTAAA
EV548032       <-- ......................CCAAACTCTTAACATTCATT--ATTAAA
FY432034       <-- ..................................................
FY429985       <-- ..................................................
EY940478       <-- ..................................................
EW715827       <-- ..................................................
EW715710       <-- ..................................................
EX886885       <-- ..................................................
FD561430       <-- ..................................................
FD544339       <-- ..................................................
EX754570       <-- ..................................................
FD972277       <-- ..................................................
FD579953       <-- ..................................................
EW720329       --> GAATATCTCAACAACATTCTTACCAAACTCTTAACATTCATT--ATTTAA
FD546843       --> ....ATCTCAACGACATTCTTACCAAACTCTTAACATTAATTTTATTAAA
EY936232       --> ............agCATTCTTACCAAACTCTTAACATTCATT--ATTAAA
EX891168       --> .....................ACCAAACTCTTAACATTCATT--ATTAAA
FD552909       --> .....................ACCAAACTCTTAACATTCATT--ATTAAA
FD565595       --> ....................agCCAAACTCTTAACATTCATT--ATTTAA
FD583839       --> .....................gCCAAACTCTTAACATTCATT--ATTAAA
EW719407       --> ...............................................AAA

               101    -    151
UN21490        --> TAGAACAATTCGCTTTTGATAGGTGGCGTGATAATTAACACAACATCATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD556827       <-- TAGAACAATTCGCTTTTGATAGGTGGCGTGATAATTAACACAACATCATC
FD550953       <-- TAGAACAATTCGCGTTTGATAGGTGGCGTGATAATTAACACAACATCATC
FD557790       <-- TAGAACAATTCGCTTTTGATAGGTGGCGTGATAATTAACACAACATCATC
EV548032       <-- TAGAACAATTCGCTTTTGATAGGTGGCGTGATAATTAACACAACATCATC
FY432034       <-- ..................................................
FY429985       <-- ..................................................
EY940478       <-- ..................................................
EW715827       <-- ..................................................
EW715710       <-- ..................................................
EX886885       <-- ..................................................
FD561430       <-- ..................................................
FD544339       <-- ..................................................
EX754570       <-- ..................................................
FD972277       <-- ..................................................
FD579953       <-- ..................................................
EW720329       --> TAGAACAATTCGCTTTCGATAGGTGGC-CGATAATTAACACAACATCATC
FD546843       --> TAGAACAATTCGCGTTTGATAGGTGGCGTGATAATTAACACAACATCATC
EY936232       --> TAGAACAATTCGCTTTTGATAGGTGGCGTGATAATTAACACAACATCATC
EX891168       --> TAGAACAATTCGCTTTTGATAGATGGCGTGATAATTAACACAACATCATC
FD552909       --> TAGAACAATTCGCTTTTGATAGGTGGCGTGATAATTAACACAACATCATC
FD565595       --> TAGAACAATTCGCTTTCGATAGGTGGCGTGATAATTAACACAACATCATC
FD583839       --> TAGAACAATTCGCTTTTGATAGGTGGCGTGATAATTAACACAACATCATC
EW719407       --> TAGAACAATTCGCTTTTGATAGATGGCGTGATAATTAACGCAACATCATC

               151    -    201
UN21490        --> GTACAGATAAAAGACATACTGCTACTTATTTCTTCTCACGCCATTAAACC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD556827       <-- GTACAGATAAAAGACATACTGCTACTTATTTCTTCTCACGCCATTAAACC
FD550953       <-- ATACAGATAAAAGACATACTACTACTTATTTCTTCTCACGCCATTAAACC
FD557790       <-- GTACAGATAAAAGACATACTGCTACTTc......................
EV548032       <-- GTACAGATAAAAGACATACTGCTACTTATTTCTTCTCACGCCATTAAACC
FY432034       <-- ..................................................
FY429985       <-- ..................................................
EY940478       <-- ..................................................
EW715827       <-- ..................................................
EW715710       <-- ..................................................
EX886885       <-- ..................................................
FD561430       <-- ..................................................
FD544339       <-- ..................................................
EX754570       <-- ..................................................
FD972277       <-- ..................................................
FD579953       <-- ..................................................
EW720329       --> GTACAGATAAAAGACATACTGCTACTTATTTCTTCTCACGCCATTAAACC
FD546843       --> ATACAGATAAAAGACATACTACTACTTATTTCTTCTCACGCCATTAAACC
EY936232       --> GTACAGATAAAAGACATACTGCTACTTATTTCTTCTCACGCCATTAAACC
EX891168       --> GTACAGATAAAAGACATACTGCTACTTATTTCTTCTCACGCCATTAAACC
FD552909       --> GTACAGATAAAAGACATACTGCTACTTATTTCTTCTCACGCCATTAAACC
FD565595       --> GTACAGATAAAAGACATACTGCTACTTATTTCTTCTCACGCCATTAAACC
FD583839       --> GTACAGATAAAAGACATACTGCTACTTATTTCTTCTCACGCCATTAAACC
EW719407       --> GTACAGATAAAAGACATACTGCTACTTATTTCTTCTCACGCCATTAAACC

               201    -    251
UN21490        --> AAATCAACAAGCCTTAAGTGGGGTCCCACAAAGACAGAGGTTGTGAGAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD556827       <-- AAATCAACAAGCCTTAAGTGGGGTCCCACAAAGACAGAGGTTGTGAGAGA
FD550953       <-- AAATCAACAAGCCTTAAGTGGGGTCCCACAAAGACAGAGGTTGTGAGAGA
FD557790       <-- ..................................................
EV548032       <-- AAATCAACAAGCCTTAAGTGGGGTCCCACAAAGACAGAGGTTGTGAGAGA
FY432034       <-- ..................................................
FY429985       <-- ..................................................
EY940478       <-- ..................................................
EW715827       <-- ..................................................
EW715710       <-- ..................................................
EX886885       <-- ..................................................
FD561430       <-- ..................................................
FD544339       <-- ..................................................
EX754570       <-- ..................................................
FD972277       <-- ..................................................
FD579953       <-- ..................................................
EW720329       --> AAATCAACAAGCCTTAAGTGGGGTCCCACAAAGACAGAGGTTGTGAGAGA
FD546843       --> AAATCAACAAGCCTTAAGTGGGGTCCCACAAAGACAGAGGTTGTGAGAGA
EY936232       --> AAATCAACAAGCCTTAAGTGGGGTCCCACAAAGACAGAGGTTGTGAGAGA
EX891168       --> AAATCAACAAGCCTTAAGTGGGGTCCCACAAAGACAGAGGTTGTGAGAGA
FD552909       --> AAATCAACAAGCCTTAAGTGGGGTCCCACAAAGACAGAGGTTGTGAGAGA
FD565595       --> AAATCAACAAGCCTTAAGTGGGGTCCCACAAAGACAGAGGTTGTGAGAGA
FD583839       --> AAATCAACAAGCCTTAAGTGGGGTCCCACAAAGACAGAGGTTGTGAGAGA
EW719407       --> AAATCAACAAGCCTTAAGTGTGGTCCCACAAAGACAGAGGTTGTGAGAGA

               251    -    301
UN21490        --> AAGCAGATGGTTCAAATGTCTGAAGGAGACCACCACGTGGGATTTTTCCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD556827       <-- AAGCAGATGGTTCAAATGTCTGAAGGAGACCACCACGTGGGATTTTTCCG
FD550953       <-- AAGCAGATGGTTCAAATGTCTGAAGGAGACCACCACGTGGGATTTTTCCG
FD557790       <-- ..................................................
EV548032       <-- AAGCAGATGGTTCAAATGTCTGAAGGAGACCACCACGTGGGATTTTTCCG
FY432034       <-- ..................................................
FY429985       <-- ..................................................
EY940478       <-- ..................................................
EW715827       <-- ..................................................
EW715710       <-- ..................................................
EX886885       <-- ..................................................
FD561430       <-- ..................................................
FD544339       <-- ..................................................
EX754570       <-- ..................................................
FD972277       <-- ..................................................
FD579953       <-- ..................................................
EW720329       --> AAGCAGATGGTTCAAATGTCTGAAGGAGACCACCACGTGGGATTTTTCCG
FD546843       --> AAGCAGATGGTTCAAATGTCTGAAGGAGACCACCACGTGGGATTTTTCCG
EY936232       --> AAGCAGATGGTTCAAATGTCTGAAGCAGACCACCACGTGGGATTTTTCCG
EX891168       --> AAGCAGATGGTTCAAATGTCTGAAGGAGACCACCACGTGGGATTTTTCCG
FD552909       --> AAGCAAATGGTTCAAATGTCTGAAGGAGACCACCACGTGGGATTTTTCCG
FD565595       --> AAGCAGATGGTTCAAATGTCTGAAGGAGACCACCACGTGGGATTTTTCCG
FD583839       --> AAGCAGATGGTTCAAATGTCTGAAGGAGACCACCACGTGGGATTTTTCCG
EW719407       --> AAGCAGATGGTTCAAATGTCTGAAGGAGACCACCACGTGGGATTTTTCCG

               301    -    351
UN21490        --> CATAGATGATTGTAACTAACGTCGAAATGCTCGAGACGCAGCTTACTCAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD556827       <-- CATAGATGATTGTAACTAACGTCGAAATGCTCGAGACGCAGCTTACTCAG
FD550953       <-- CATAGATGATTGTAACTAACGTCGAAATGCTCGAGACGCAGCTTACTCAG
FD557790       <-- ..................................................
EV548032       <-- CATAGATGATTGTAACTAACGTCGAAACGCTCGAGACGCAGCTTACTCAG
FY432034       <-- CATAGATGATTGTAACTAACGTCGAAATGCTCGAGACGCAGCTTACTCAG
FY429985       <-- ......................CGAAATGCTCGAGACGCAGCTTACTCAG
EY940478       <-- ..................................................
EW715827       <-- ..................................................
EW715710       <-- ..................................................
EX886885       <-- ..................................................
FD561430       <-- ..................................................
FD544339       <-- ..................................................
EX754570       <-- ..................................................
FD972277       <-- ..................................................
FD579953       <-- ..................................................
EW720329       --> CATAGATGATTGTAACTAACGTCGAAATGCTCGAGACGCAGCTTACTCAG
FD546843       --> CATAGATGATTGTAACTAACGTCGAAATGCTCGAGACGCAGCTTACTCAG
EY936232       --> CATAAATGATTGTAACTAACGTCGAAATGCTCGAGACGCAGCTTACTCAG
EX891168       --> CATAGATGATTGTAACTAACGTCGAAATGCTCGAGACGCAGCTTACTCAG
FD552909       --> CATAGATGATTGTAACTAACGTCGAAATGCTCGAGACGCAGCTTACTCAG
FD565595       --> CATAGATGATTGTAACTAACGTCGAAATGCTCGAGACGCAGCTTACTCAG
FD583839       --> CATAGATGATTGTAACTAACGTCGAAATGCTCGAGACGCAGCTTACTCAG
EW719407       --> CATAGATGATTGTAACTAACGTCGAAATGCTCGAGACGCAGCTTACTCAG

               351    -    401
UN21490        --> CTCCCTAGGAAACTTCCCGAAGATTTTGTTATGGCTCAGATCCAACGACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD556827       <-- CTCCCTAGGAAACTTCCCGAAGATTTTGTTATGGCTCAGATCCAACGACA
FD550953       <-- CTCCCTAGGAAACTTCCCGAAGATTTTGTTATGGCTCAGATCCAACGACA
FD557790       <-- ..................................................
EV548032       <-- CTCCCTAGGAAACTTCCCGAAGATTTTGTTATGGCTCAGATCCAACGACA
FY432034       <-- CTCCCTAGGAAACTTCCCGAAGATTTTGTTATGGCTCAGATCCAACGACA
FY429985       <-- CTCCCTAGGAAACTTCCCGAAGATTTTGTTATGGCTCAGATCCAACGACA
EY940478       <-- .....................GATTTTGTTGTGGCTCAGATCCAACGACA
EW715827       <-- .......................gatttgTATGGCTCAGATCCAACGACA
EW715710       <-- ..................................................
EX886885       <-- ..................................................
FD561430       <-- ..................................................
FD544339       <-- ..................................................
EX754570       <-- ..................................................
FD972277       <-- ..................................................
FD579953       <-- ..................................................
EW720329       --> CTCCCTAGGAAACTTCCCGAAGATTTTGTTATGGCTCAAATCCAACGACA
FD546843       --> CTCCCTAGGAAACTTCCCGAAGATTTTGTTATGGCTCAAATCCAACGACA
EY936232       --> CTCCCTAGGAAACTTCCCGAAGATTTTGTTGTGGCTCAGATCCAACGACA
EX891168       --> CTCCCTAGGAAACTTCCCGAAGATTTTGTTATGGCTCAGATCCAACGACA
FD552909       --> CTCCCTAGGAAACTTCCCGAAAATTTTGTTATGGCTCAGATCCAACGACA
FD565595       --> CTCCCTAGGAAACTTCCCGAAGATTTTGTTATGGCTCAAATCCAACGACA
FD583839       --> CTCCCTAGGAAACTTCCCGAAAATTTTGTTATGGCTCAAATCCAACGACA
EW719407       --> CTCCCTAGGAAACTTCCCGAAGATTTTGTTATGGCTCAGATCCAACGACA

               401    -    451
UN21490        --> CTATGCTCCTAGCAAACTTAACCTTGGCGAGATCGAACTCAAACATGTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD556827       <-- CTATGCTCCTAGCAAACTTAACCTTGGCGAGATCGAACTCAAACATGTTC  Raphanus raphanistrum subsp. landra
FD550953       <-- CTATGCTCCTAGCAAACTTAACCTTGGAGAGATCGAACTCAAACATGTTC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD557790       <-- ..................................................  Raphanus raphanistrum subsp. landra
EV548032       <-- CTATGCTCCTAGCAAACTTAACCTTGGCGAGATCGAACTCAAACATGTTC  Raphanus raphanistrum subsp. raphanistrum (NY)
FY432034       <-- CTATGCTCCTAGCAAACTTAACCTTGGCGAGATCGAACTCAAACATGTTC  Raphanus sativus cv GSK3-1
FY429985       <-- CTATGCTCCTAGCAAACTTAACCTTGGCGAGATCGAACTCAAACATGTTC  Raphanus sativus cv GSK3-1
EY940478       <-- CTATGCTCCTAGCAAACTTAACCTTGGAGAGGTCGAACTCAAACATGTTC  Raphanus sativus cv Early Scarlet Globe
EW715827       <-- CTATGCTCCTAGCAAACTTAACCTTGGCGGGATCGAACTCAAACATATTC  Raphanus sativus var. oleiformis
EW715710       <-- ...........................CGAGATCGAACTCAAACATGTTC  Raphanus sativus var. oleiformis
EX886885       <-- ...........................CGAGATCGAAATCAAACATGTTC  Raphanus sativus var. oleiformis
FD561430       <-- ...........................CGAGATCGAACTCAAACATATTC  Raphanus sativus var. oleiformis
FD544339       <-- ..............................GATCGA-CTCAAACATGTTC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX754570       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD972277       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD579953       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EW720329       --> CTATGCTCCTAGCAAACTTAACCTTGGCGGGATCGAACTCAAACATATTC  Raphanus sativus var. oleiformis
FD546843       --> CTATGCTCCTAGCAAACTTAACCTTGGAGAGATCGAACTCAAACATGTTC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY936232       --> CTATGCTCCTAGCAAACTTAACCTTGGAGAGGTCGAACTCAAACATGTTC  Raphanus sativus cv Early Scarlet Globe
EX891168       --> CTATGCTCCTAGCAAACTTAACCTTGGCGAGATCGAAATCAAACATGTTC  Raphanus sativus var. oleiformis
FD552909       --> CTATGCTCCTAGCAAACTTAACCTTGGCGAGATCGAACTTAAACATGTTT  Raphanus raphanistrum subsp. landra
FD565595       --> CTATGCTCCTAGCAAACTTAACCTTGGCGAGATCGAACTCAAACATATTC  Raphanus sativus var. oleiformis
FD583839       --> CTATGCTCCTAGCAAACTTAACCTTGGCGAGATCGAACTCAAACATGTTC  Raphanus sativus cv Rat-Tail Radish #3870
EW719407       --> CTATGCTCCTAGCAAACTTAACCTTGGCGAGATCGAACTCAAACATGTTC  Raphanus sativus var. oleiformis

               451    -    501
UN21490        --> CTGGATAGATTCACACGTATTGTTGTTTTGTTACGTCCGAAAAACATCGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD556827       <-- CTGGc.............................................
FD550953       <-- CTGCATAGATTCACACGTATTGTTGTTTTGTTACGTCCGAAAAACATCGA
FD557790       <-- ..................................................
EV548032       <-- CTGGATAGATTCACACGTATTGTTGTTTTGTTACGTCCGAAAAACATCGA
FY432034       <-- CTGGATAGATTCACACGTATTGTTGTTTTGTTACGTCCGAAAAACATCGA
FY429985       <-- CTGGATAGATTCACACGTATTGTTGTTTTGTTACGTCCGAAAAACATCGA
EY940478       <-- CTGGCTAGATTCACACGTATTGTTGTTTTGTTACGTCCGAAAAACATCGA
EW715827       <-- CTGGATAGATTCACACGTATTGTTGTTT-GTCACGTCCGAAAAACATCGA
EW715710       <-- CTGGATAGATTCACACGTATTGTTGTTTTGTTACGTCCGAAAAACATCGA
EX886885       <-- CTGGATAGATTCACACGTATTGTTGTTTTGTTACGTCCGAAAAACATCGA
FD561430       <-- CTGGATAGATTCACACGTATTGTTGTTT-GTTACGTCCGAAAAACATCGA
FD544339       <-- CTGGCTATATTCACACGTATTGTTATTT-GTTACGTCCGAAAAACATCGA
EX754570       <-- ...............................TACGTCCGAAAAACATCGA
FD972277       <-- ..................................................
FD579953       <-- ..................................................
EW720329       --> CTGGATAGATTCACACGTATTGTTGTTTTGTCACGTCCGAAAAACATCGA
FD546843       --> CTGCATAGATTCACACGTATTGTTGTTTTGTTACGTCCGAAAAACATCGA
EY936232       --> CTGGCTAGATTCACACGTATTGTTGTTTTGTTACGTCCGAAAAA......
EX891168       --> CTGGATAGATTCACACGTATTGTTGTTTTGTTACGTCCGAAAAACATCGA
FD552909       --> TTGGATAGATTCACACGTATTGTTGTTTTGTTACGTCCGAAAAACATCGA
FD565595       --> CTGGATAGATTCACACGTATTGTTGTTTTGTTACGTCCGAAAAACATCGA
FD583839       --> CTGGATAGATTCACACGTATTGTTGTTTTGTTACGTCCGAAAAACATCGA
EW719407       --> CTGGATAGATTCACACGTATTGTTGTTTTGTTACGTCCGAAAAACATCGA

               501    -    551
UN21490        --> ACC-ATCTCCTGTGAAGCCGTTTCCCGACAGATCCACTGCGTTAAAGTCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD556827       <-- ..................................................
FD550953       <-- ACC-ATCTCCTGTGAAACCGTTTCCCGACAGATCCACTGCGTTAAAGTCG
FD557790       <-- ..................................................
EV548032       <-- ACC-ATCTCCTGTGAAGCCGTTTCCCGACAGATCCACTGCGTTAAAGTCG
FY432034       <-- ACC-ATCTCCTGTGAAGCCGTTTCCCGACAGATCCACTGCGTTAAAGTCG
FY429985       <-- ACC-ATCTCCTGTGAAGCCGTTTCCCGACAGATCCACTGCGTTAAAGTCG
EY940478       <-- GCC-ATCTCCTGTGAAACCGTTTCCCGACAGATCCACTGCGTTAAAGTCG
EW715827       <-- ACCCATCTCCTGTGAAGCCGTTTCCCGACAGATCCACTGCGTTAAAGTCG
EW715710       <-- ACC-ATCTCCTGTGAAGCCGTTTCCCGACAGGTCCACTGCGTTAAAGTCG
EX886885       <-- ACC-ATCTCCTGTGAAGCCGTTTCCCGACAGATCCACTGCGTTAAAGTCG
FD561430       <-- ACC-ATCTCCTGTGAAGCCGTTTCCCGACAGATCCACTGCGTTAAAGTCG
FD544339       <-- ACC-ATCTCCTGTGAAACCGTTTCCCGACAGATCCACTGCGTTAAAGTCG
EX754570       <-- ACC-ATCTC-TGTGAA-CCGTT-CCCGACAGATCCACTGCGT-AAAGTCG
FD972277       <-- .......................CCCGACAGATCCACTGCGTTAAAGTCG
FD579953       <-- ..................................................
EW720329       --> ACC-ATCTCCTGTGAAGCCGTTTCCCGACAGATCCACTGCGTTAAAGTCG
FD546843       --> ACC-ATCTCCTGTGAAACCGTTTCCCGACAGATCCACTGCGTTAAAGTCG
EY936232       --> ..................................................
EX891168       --> ACC-ATCTCCTGTGAAGCCGTTTCCCGACAGATCCACTGCGTTAAAGTCG
FD552909       --> ACC-ATCTCCTGTGAAGCCGTTTCCCGACAGATCCACTGCGTTAAAGTCG
FD565595       --> ACC-ATCTCCTGTGAAGCCGTTTCCCGACAGATCCACTGCGTTAAAGTCG
FD583839       --> ACC-ATCTCCTGTGAAGCCGTTTCCCGACAGATCCACTGCGTTAAAGTCG
EW719407       --> ACC-ATCTCCTGTGAAGCCGTTTCCCGACAGGTCCACTGCGTTAAAGTCG

               551    -    601
UN21490        --> TACTTTGACAACGATTCCGGTACTTTTCCTGAGAGCTTATTGTTAAACAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD556827       <-- ..................................................
FD550953       <-- TACTTTAACAACGc....................................
FD557790       <-- ..................................................
EV548032       <-- TACTTTGACAACGATTCCGGTACTTTTCCTGAGAGCTTATTGTTAAACAG
FY432034       <-- TACTTTGACAACGATTCCGGTACTTTTCCTGAGAGCTTATTGTTAAACAG
FY429985       <-- TACTTTGACAACGATTCCGGTACTTTTCCTGAGAGCTTATTGTTAAACAG
EY940478       <-- TACATTGACAACGATTCCGGTACTTTTCCTGAGAGCTTATTGTTAAACAG
EW715827       <-- TACTTTGACAACGATTCCGGTACTTTTCCTGAGAGCTTATTGTTAAACAG
EW715710       <-- TACTTTGACAACGATTCCGGTACTTTTCCTGAGAGCTTATTGTTAAACAG
EX886885       <-- TACTTTGACAACGATTCCGGTACTTTTCCTGAGAGCTTATTGTTAAACAG
FD561430       <-- TACTTTGACAACGATTCCGGTACTTTTCCTGAGAGCTTATTGTTAAACAG
FD544339       <-- TACTTTGACAACGATTCTGGTACTTTTCCTGAGAGCTTATTGTTAAACAG
EX754570       <-- TACTTTGACAACGATTCTGGTACTT--TCTGAGAGCTTATTGTTAAGCAG
FD972277       <-- TACTTTGACAACGATTCTGGTACTTTTC-TGAGAGCTTATTGTTAAACAG
FD579953       <-- ..................................................
EW720329       --> TACTTTGACAACGATTCCGGTACTTTTCCTGAGAGCTTATTGTTAAACAG
FD546843       --> TACTTTAACAACGc....................................
EY936232       --> ..................................................
EX891168       --> TACTTTGACAACGATTCCGGTACTTTTCCTGAGAGCTTATTGTTAAACAG
FD552909       --> TACTTTGACAACGATTCCGGTACTTTTCCTGAGAGCTTATTGTTAAACAG
FD565595       --> TACTTTGACAACGATTCCGGTACTTTTCCTGAGAGCTTATTGTTAAACAG
FD583839       --> TACTTTGACAACGATTCCGGTACTTTTCCTGAGAGCTTATTGTTAAACAG
EW719407       --> TACTTTGACAACGATTCCGGTACTTTTCCTGAGAGCTTATTGTTAAACAG

               601    -    651
UN21490        --> GTAGAGATTAGGAACGGTGCCTACAAAAGAACCGAAAGAGTCTGGTATAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD556827       <-- ..................................................
FD550953       <-- ..................................................
FD557790       <-- ..................................................
EV548032       <-- GTAGAGATTAGGAACGGTGCCTACAAAAGAACCGAAAGAGTCTGGTATAG
FY432034       <-- GTAGAGATTAGGAACGGTGCCTACAAAAGAACCGAAAGAGTCTGGTATAG
FY429985       <-- GTAGAGATTAGGAACGGTGCCTACAAAAGAACCGAAAGAGTCTGGTATAG
EY940478       <-- GTAGAGATTAGGAACGGTGCCTACAAAAGAACCGAAAGAGTCTGGTATAG
EW715827       <-- GTAGAGATTAGGAACGGTGCCTACAAAAGAACCGAAAGAGTCTGGTATAG
EW715710       <-- GTAGAGATTAGGAACGGTGCCTACAAAAGAACCGAAAGAGTCTGGTATAG
EX886885       <-- GTAGAGATTAGGAACGGTGCCTACAAAAGAACCGAAAGAGTCTGGTATAG
FD561430       <-- GTAGAGATTAGGAACGGTGCCTACAAAAGAACCGAAAGAGTCTGGTATAG
FD544339       <-- GTAGAGATTAGGAACGGTGCCTACAAAAGAACCGAAAGAGTCTGGTATAG
EX754570       <-- GTAGAGATTAGGAACGGTGCCTACAAAAGAACCGAAAGAGTCTGGTATAG
FD972277       <-- GTAGAGATTAGGAACGGTGCCTACAAAAGAACCGAAAGAGTCTGGTATAG
FD579953       <-- ........................AAAAGAACCGAAAGAGTCTGGTATAG
EW720329       --> GTAGAGATTAGGAACGGTGCCTACAAAAGAACCGAAAGAGTCTGGTATAG
FD546843       --> ..................................................
EY936232       --> ..................................................
EX891168       --> GTAGAGATTAGGAACGGTGCCTACAAAAGAACCGAAAGAGTCTGGTATAG
FD552909       --> GTAGAGATTAGGAACGGTGCCTACAAAAGAACCGAAAGAGTCTGGTATAG
FD565595       --> GTAGAGATTAGGAACGGTGCCTACAAAAGAACCGAAAGAGTCTGGTATAG
FD583839       --> GTAGAGATTAGGAACGGTGCCTACAAAAGAACCGAAAGAGTCTGG.....
EW719407       --> GTAGAGATTAGGAACGGTGCCTACAAAAGAACCGAAAGAGTCTGGTATAG

               651    -    701
UN21490        --> AACCGGTTAACTTATTATCGTTGATCTGAAGGGCTCCTAGCTTCGGCATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD556827       <-- ..................................................
FD550953       <-- ..................................................
FD557790       <-- ..................................................
EV548032       <-- AACCGGTTAACTTATTATCGTTGATCTGAAGGGCTCCTAGCTTCGGCATC
FY432034       <-- AACCGGTTAACTTATTATCGTTGATCTGAAGGGCTCCTAGCTTCGGCATC
FY429985       <-- AACCGGTTAACTTATTATCGTTGATCTGAAGGGCTCCTAGCTTCGGCATC
EY940478       <-- AACCGGTTAACTTATTATCGTTGATCTGAAGGGCTCCTAGCTTCGGCATC
EW715827       <-- AACCGGTTAACTTATTATCGTTGATCTGAAGGGCTCCTAGCTTCGGCATC
EW715710       <-- AACCGGTTAACTTATTATCGTTGATCTGAAGGGCTCCTAGCTTCGGTATC
EX886885       <-- AACCGGTTAACTTATTATCGTTGATCTGAAGGGCTCCTAGCTTCGGTATC
FD561430       <-- AACCGGTTAACTTATTATCGTTGATCTGAAGGGTTCCTAGCTTCGGCATC
FD544339       <-- AACCGGTTAACTTATTATCGTTGATCTGAAGGGCTCCTAGCTTCGGCATC
EX754570       <-- AACCGGTTAACTTATTATCGTTGATCTGAAGGGCTCCTAGCTTCGGCATC
FD972277       <-- AACCGGTTAACTTATTATCGTTGATCTGAAGGGCTCCTAGCTTCGGCATC
FD579953       <-- AACCGGTTAACTTATTATCGTTGATCTGAAGGGCTCCTAGCTTCGGCATC
EW720329       --> AACCGGTTAACTTATTATCGTTGATCTGAAGGGCTCCTAGCTTCGGCATC
FD546843       --> ..................................................
EY936232       --> ..................................................
EX891168       --> AACCGGTTAACTTATTATCGTTGATCTGAAGGGCTCCTAGCTTCGGTATC
FD552909       --> AACCGGTTAACTTATTATCGTTGATCTGAAGGGCTCCTAGCTTCGGCATC
FD565595       --> AACCGGTTAACTTATTATCGTTGATCTGAAGGGTTCCTAGCTTCGGCATC
FD583839       --> ..................................................
EW719407       --> AACCGGTTAACTTATTATCGTTGATCTGAAGGGCTCCTAGCTTCGGTATC

               701    -    751
UN21490        --> TGAGAAATCGAACCGGGAATTGGACCGGTAAACTGGTTAAAGGAAAGGTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD556827       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD550953       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD557790       <-- ..................................................  Raphanus raphanistrum subsp. landra
EV548032       <-- TGAGAAATCGACCCGGGAATTGGACCGGTAAACTGGTTAAAGGAAAGGTC  Raphanus raphanistrum subsp. raphanistrum (NY)
FY432034       <-- TGAGAAATCGAACCGGGAATTGGACCGGTAAACTGGTTAAAGGAAAGGTC  Raphanus sativus cv GSK3-1
FY429985       <-- TGAGAAATCGAACCGGGAATTGGACCGGTAAACTGGTTAAAGGAAAGGTC  Raphanus sativus cv GSK3-1
EY940478       <-- TGAGAAATCGAACCGGGAATTGGACCGGTAAACTGGTTAAAGGAAAGGTC  Raphanus sativus cv Early Scarlet Globe
EW715827       <-- TGAGAAATCGAACCGGGAATTGGACCGGTAAACTGGTTAAAGGAAAGGTC  Raphanus sativus var. oleiformis
EW715710       <-- TGAGAAATCGAACTGGGAATTGGACCGGTAAACTGGTTAAAGGAAAGGTC  Raphanus sativus var. oleiformis
EX886885       <-- TGAGAAATCGAACCGGGAATTGGACCGGTAAACTGGTTAAAGGAAAGGTC  Raphanus sativus var. oleiformis
FD561430       <-- TGAGAAATCGAACCGGGAATTGGACCGGTAAACTGGTTAAAGGAAAGGTC  Raphanus sativus var. oleiformis
FD544339       <-- TGAGAAATCGAACTGGGAATTGGACCGGTAAACTGGTTAAAGGAAAGGTC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX754570       <-- TGAGAAATCGAACTGGGAATTGGACCGGTAAACTGGTTAAAGGAAAGGTC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD972277       <-- TGAGAAATCGAACTGGGAATTGGACCGGTAAACTGGTTAAAGGAAAGGTC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD579953       <-- TGAGAAATCGAACCAGGAATTGGACCGGTAAACTGGTTAAAGGAAAGGTC  Raphanus sativus cv Rat-Tail Radish #3870
EW720329       --> TGAGAAATCGAACCGGGAATTGGACCGGTAAACTGGTTAAAGGAAAGGTC  Raphanus sativus var. oleiformis
FD546843       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY936232       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EX891168       --> TGAGAAATCGAACCGGGAATTGGACCGGTAAACTGGTTAAAGGAAAGGTC  Raphanus sativus var. oleiformis
FD552909       --> TGAGAAATCGACCCGGGAATTGGACCGG......................  Raphanus raphanistrum subsp. landra
FD565595       --> TGAGAAATCGAACCGGGAATTGGACCGGTAAACTGGTTAAAGGAAAGGTC  Raphanus sativus var. oleiformis
FD583839       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EW719407       --> TGAGAAATCGAACTGGGAATTGGACCGGTAAACTGGTTAAAGGAAAGGTC  Raphanus sativus var. oleiformis

               751    -    801
UN21490        --> TAAGAACGTAACGCTCTTGAGCTCGCTGACGAAATCAGGAATTGAACCAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD556827       <-- ..................................................
FD550953       <-- ..................................................
FD557790       <-- ..................................................
EV548032       <-- TAAGAACGTAACGCTCTTGAGCTCGCTc......................
FY432034       <-- TAAGAACGTAACGCTCTTGAGCTCGCTGACGAAATCAGGAATTGAACCAG
FY429985       <-- TAAGAACGTAACGCTCTTGAGCTCGCTGACGAAATCAGGAATTGAACCAG
EY940478       <-- TAAGAACGTAACGCTCTTGAGCTCGCTGACGAAATCAGGAATTGAACCAG
EW715827       <-- TAAGAACGTAACGCTCTTGAGCTCGCTGACGAAATCAGGAATTGAACCAG
EW715710       <-- TAAGAACGTAACGCTCTTGAGCTCGCTGACGAAATCAGGAATTGAACCAG
EX886885       <-- TAAGAACGTAACGCTCTTGAGCTCGCTGACGAAATCAGGAATTGAACCAG
FD561430       <-- TAAGAACGTAACGCTCTTGAGCTCGCTGACGAAATCAGGAATTGAACCAG
FD544339       <-- TAAGAACGTAACACTCTTGAGCTCGCTGATGAAATCAGGGATTGGACCGG
EX754570       <-- TAAGAACGTAACACTCTTGAGCTCGCTGATGAAATCAGGGATTGGACCGG
FD972277       <-- TAAGAACGTAACACTCTTGAGCTCGCTGATGAAATCAGGGATTGGACCGG
FD579953       <-- TAAGAACGTAACGCTCTTGAGCTCGCTGACGAAATCAGGAATTGAACCAG
EW720329       --> TAAGAACGTAACGCTCTTGAGCTCGCTGAC....................
FD546843       --> ..................................................
EY936232       --> ..................................................
EX891168       --> TAAGAACGTAACGCTCTTGAGCTCGCTGACGAAATCAGGAATTGAACCAG
FD552909       --> ..................................................
FD565595       --> TAAGAACGTAACGCTCTTGAGCTCGCTGACGAAATCAGGAATTGAACCAG
FD583839       --> ..................................................
EW719407       --> TAAGAACGTAACGCTCTTGAGCTCGCTGACGAAATCAGGAATTGAACCAG

               801    -    851
UN21490        --> AGAGATTGGTCTCCTTTAACCGGAGGAGGTCCAGGTACTTGAGTTTGGTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD556827       <-- ..................................................
FD550953       <-- ..................................................
FD557790       <-- ..................................................
EV548032       <-- ..................................................
FY432034       <-- AGAGATTGGTCTCCTTTAACCGGAGGAGGTCCAGGTACTTGAGTTTGGTG
FY429985       <-- AGAGATTGGTCTCCTTTAACCGGAGGAGGTCCAGGTACTTGAGTTTGGTG
EY940478       <-- AGAGATTGGTCTCCTTTAACCGGAGGAGGTCCAGGTACTTGAGTTTGGTG
EW715827       <-- AGAGATTGGTCTCCTTTAACCGGAGGAGGTCCAGGTACTTGAGTTTGGTG
EW715710       <-- AGAGATTGGTCTCCTTTAACCGGAGGAGGTCCAGGTACTTGAGTTTGGTG
EX886885       <-- AGAGATTGGTCTCCTTTAACCGGAGGAGGTCCAGGTACTTGAGTTTGGTG
FD561430       <-- AGAGATTGGTCTCCTTTAACCGGAGGAGGTCCAGGTACTTGAGTTTGGTG
FD544339       <-- AGAGATTGGTCTCCTTTAACCGGAGGAGGTCCAGGTACTTGAGTTTGGTG
EX754570       <-- AGAGATTGGTCTCCTTTAACCGGAGGAGGTCCAGGTACTTGAGTTTGGTG
FD972277       <-- AGAGATTGGTCTCCTTTAACCGGAGGAGGTCCAGGTACTTGAGTTTGGTG
FD579953       <-- AGAGATTGGTCTCCTTTAACCGGAGGAGGTCCAGGTACTTGAGTTTGGTG
EW720329       --> ..................................................
FD546843       --> ..................................................
EY936232       --> ..................................................
EX891168       --> AGAGATTGGTCTCCTTTAACCGGAGGAGGTCCAGGTACTTGAGTTTGGTG
FD552909       --> ..................................................
FD565595       --> AGAGATTGGTCTCCT...................................
FD583839       --> ..................................................
EW719407       --> AGAGATTGGTCTCCTTTAACCGGAGGAGGTCCAGGTACTTGAGTTTGGTG

               851    -    901
UN21490        --> ATAGTGTGTGGAATGTTCCCAGTGAGATGAGTCAAGTAACTGAAGTCAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD556827       <-- ..................................................
FD550953       <-- ..................................................
FD557790       <-- ..................................................
EV548032       <-- ..................................................
FY432034       <-- ATAGTGTGTGGAATGTTCCCAGTGAGATGAGTCAAGTAACTGAAGTCAAG
FY429985       <-- ATAGTGTGTGGAATGTTCCCAGTGAGATGAGTCAAGTAACTGAAGTCAAG
EY940478       <-- ATAGTGTGTGGAATGTTCCCAGTGAGATGAGTCAAGTAACTGAAGTCAAG
EW715827       <-- ATAGTGTGTGGAATGTTCCCAGTGAGATGAGTCAAGTAACTGAAGTCAAG
EW715710       <-- ATAGTGTGTGGAATGTTCCCAGTGAGATGAGTCAAGTAA-AGAAGTCAAG
EX886885       <-- ATAGTGTGTGGAATGTTCCCAGTGAGATGAGTCAAGTAACTGAAGTCAAG
FD561430       <-- ATAGTGTGTGGAATGTTCCCAGTGAGATGAGTCAAGTAACTGAAGTCAAG
FD544339       <-- ATGGTGTGTGGAATGTTTCCAGTGAGATGAGTCAAGTAACTGAAGTCAAG
EX754570       <-- ATGGTGTGTGGAATGTTTCCAGTGAGATGAGTCAAGTAACTGAAGTCAAG
FD972277       <-- ATGGTGTGTGGAATGTTTCCAGTGAGATGAGTCAAGTAACTGAAGTCAAG
FD579953       <-- ATAGTGTGTGGAATGTTCCCAGTGAGATGAGTCAAGTAACTGAAGTCAAG
EW720329       --> ..................................................
FD546843       --> ..................................................
EY936232       --> ..................................................
EX891168       --> ATAGTGTGTGGAATGTTCCCAGTGAGATGAGTCAAGTA-CTGAA......
FD552909       --> ..................................................
FD565595       --> ..................................................
FD583839       --> ..................................................
EW719407       --> ATAGTGTGTGGAATGTTCCCAGTGAGATGAGTCAAGTAA-AGAAGTCAAG

               901    -    951
UN21490        --> CGTACGGAGCTCAAGGAGGTCGCCGATCTGAGCAGGGATCTGGCCGGAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD556827       <-- ..................................................
FD550953       <-- ..................................................
FD557790       <-- ..................................................
EV548032       <-- ..................................................
FY432034       <-- CGTACGGAGCTCAAGGAGGTCGCCGATCTGAGCAGGGATCTGGCCGGAAA
FY429985       <-- CGTACGGAGCTCAAGGAGGTCGCCGATCTGAGCAGGGATCTGGCCGGAAA
EY940478       <-- CGTACGGAGCTCAAGGAGGTCGCCGATCTGAGCAc...............
EW715827       <-- CATACGGAGCTCAAGGAGGTCGCCGATCTGAGCAGGGATCTGGCCGGAAA
EW715710       <-- CGTACGGAGCTCAAGGAGGTCGCCGATCTGAGCAGGGATCTGGCCGGAAA
EX886885       <-- CGTACGGAGCTCAAGGAGGTCGCCGATCTGAGCAGGGATCTGGCCGGAAA
FD561430       <-- CGTACGGAGCTCAAGGAGGTCGCCGATCTGAGCAGGGATCTGGCCGGAAA
FD544339       <-- CGTACGGAGCTCAAGGAGGTCGCCGGTCTGAACAGGGATCTGGCCGGATA
EX754570       <-- CGTACGGAGCTCAAGGAGGTCGCCGATCTGAACAGGGATCTGGCCGGATA
FD972277       <-- CGTACGGAGCTCAAGGAGGTCGCCGATCTGAACAGGGATCTGGCCGGATA
FD579953       <-- CGTACGGAGCTCAAGGAGGTCGCCGATCTGAGCAGGGATCTGGCCGGAAA
EW720329       --> ..................................................
FD546843       --> ..................................................
EY936232       --> ..................................................
EX891168       --> ..................................................
FD552909       --> ..................................................
FD565595       --> ..................................................
FD583839       --> ..................................................
EW719407       --> CGTACGGAGCT.......................................

               951    -   1001
UN21490        --> TTTCGCCGGAGGAGATGGTGAGGGCGGTGACACGGCCGTTGGTGCACTCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD556827       <-- ..................................................
FD550953       <-- ..................................................
FD557790       <-- ..................................................
EV548032       <-- ..................................................
FY432034       <-- TTTCGCCGGAGGAGATGGTGAGGGCGGTGACACGGCCGTTGGTGCACTCG
FY429985       <-- TTTCGCCGGAGGAGATGGTGAGGGCGGTGACACGGCCGTTGGTGCACTCG
EY940478       <-- ..................................................
EW715827       <-- TTTCGCCGGAGGAGATGGTGAGGGCGGTGACGCGGCCGTTGGTGCACTCG
EW715710       <-- TTTCGCCGGAGGAGATGGTGAGGGCGGTGACACGGCCGTTGGTGCACTCG
EX886885       <-- TTTCGCCGGAGGAGATGGTGAGGGCGGTGACACGGCCGTTGGTGCACTCG
FD561430       <-- TTTCGCCGGAGGAGATGGTGAGGGCGGTGACGCGGCCGTTGGTGCACTCG
FD544339       <-- TTTCGCCGGAGGAGATGGTGAGGGCGGTGACACGGCCGTTGGTGCACTCG
EX754570       <-- TTTCGCCGGAGGAGATGGTGAGGGCGGTGACACGGCCGTTGGTGCACTCG
FD972277       <-- TTTCGCCGGAGGAGATGGTGAGGGTGGTGACACGGCCGTTGGTGCACTCG
FD579953       <-- TTTCGCCGGAGGAGATGGTGAGGGCGGTGACACGGCCGTTGGTGCACTCG
EW720329       --> ..................................................
FD546843       --> ..................................................
EY936232       --> ..................................................
EX891168       --> ..................................................
FD552909       --> ..................................................
FD565595       --> ..................................................
FD583839       --> ..................................................
EW719407       --> ..................................................

               1001   -   1051
UN21490        --> ACGCCAGTCCAGGTGGTGCAGAAGTCGGTTTGTGGGTTCCAGGAGGAGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD556827       <-- ..................................................
FD550953       <-- ..................................................
FD557790       <-- ..................................................
EV548032       <-- ..................................................
FY432034       <-- ACGCCAGTCCAGGTGGTGCAGAAGTCGGTTTGTGGGTTCCAGGAGGAGAG
FY429985       <-- ACGCCAGTCCAGGTGGTGCAGAAGTCGGTTTGTGGGTTCCAGGAGGAGAG
EY940478       <-- ..................................................
EW715827       <-- ACGCCAGTCCAGGTGGTGCAGAAGTCGGTTTGTGGGTTCCAGGAGGAGAG
EW715710       <-- ACGCCAGTCCAGGTGATGCAGAAGTCGGTTTGTGGGTTCCAGGAGGAGAG
EX886885       <-- ACGCCAGTCCAGGTGGTGCAGAAGTCGGTTTGTGGGTTCCAGGAGGAGAG
FD561430       <-- ACGCCAGTCCAGGTGGTGCAGAAGTCGGTTTGTGGGTTCCAGGAGGAGAG
FD544339       <-- ACGCCAGTCCAGGTGGTGCAGAAGTCGGTTTGTGGGTTCCAGGAGGAGAG
EX754570       <-- ACGCCAGTCCAGGTGGTGCAGAAGTCGGTTTGTGGGTTCCAGGAGGAGAG
FD972277       <-- ACGCCAGTCCAGGTGGTGCAGAAGTCGGTTTGTGGGTTCCAGGAGGAGAG
FD579953       <-- ACGCCAGTCCAGGTGGTGCAGAAGTCGGTTTGTGGGTTCCAGGAGGAGAG
EW720329       --> ..................................................
FD546843       --> ..................................................
EY936232       --> ..................................................
EX891168       --> ..................................................
FD552909       --> ..................................................
FD565595       --> ..................................................
FD583839       --> ..................................................
EW719407       --> ..................................................

               1051   -   1101
UN21490        --> GAGTGGAGGGTTGTTTAAGGCTTTCTTGATTTCGAGGAGGGCAATCTTGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD556827       <-- ..................................................
FD550953       <-- ..................................................
FD557790       <-- ..................................................
EV548032       <-- ..................................................
FY432034       <-- GAGTGGAGGGTTGTTTAAGGCTTTCTTGATTTCGAGGAGGGCAATCTTGT
FY429985       <-- GAGTGGAGGGTTGTTTAAGGCTTTCTTGATTTCGAGGAGGGCAATCTTGT
EY940478       <-- ..................................................
EW715827       <-- GAGTGGAGGGTTGTTTAAGGCTTTCTTGATTTCGAGGAGGGCAATCTTGT
EW715710       <-- GAGTGGAGGGTTGTTTAAGGCTTTCTTGATTTCGAGGAGGGCAATCTTGT
EX886885       <-- GAGTGGAGGGTTGTTTAAGGCTTTCTTGATTTCGAGGAGGGCAATCTTGT
FD561430       <-- GAGTGGAGGGTTGTTTAAGGCTTTCTTGATTTCGAGGAGGGCAATCTTGT
FD544339       <-- GAGTGGAGGGTTGTTTAAGGCTTTCGTGATTTCGAGGAGGGCAATCTTGT
EX754570       <-- GAGTGGAGGGTTGTTTAAGGCTTTCTTGATTTCGAGGAGGGCAATCTTGT
FD972277       <-- GAGTGGAGGGTTGTTTAAGGCTTTCTTGATTTCGAGGAGGGCAATCTTGT
FD579953       <-- GAGTGGAGGGTTGTTTAAGGCTTTCTTGATTTCGAGGAGGGCAATCTTGT
EW720329       --> ..................................................
FD546843       --> ..................................................
EY936232       --> ..................................................
EX891168       --> ..................................................
FD552909       --> ..................................................
FD565595       --> ..................................................
FD583839       --> ..................................................
EW719407       --> ..................................................

               1101   -   1151
UN21490        --> CATTCGAGGAGGAGCTGTGAGAAGATGGGAGAGAGATGAAGAGTATGGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD556827       <-- ..................................................
FD550953       <-- ..................................................
FD557790       <-- ..................................................
EV548032       <-- ..................................................
FY432034       <-- CATTCGAGGAGGAGCTGTGAGAAGATGGGAGAGAGATGAAGAGTATG-AG
FY429985       <-- CATTCGAGGAGGAGCTGTGAGAAGATGGGAGAGAGATGAAGAGTA-GGAG
EY940478       <-- ..................................................
EW715827       <-- CATTCGAGGAGGAGCTGTGAGAAGATGGGAGAGAGATGAAGAGTATGGAG
EW715710       <-- CATTTGAGGAGGAGCTGTGAGAAGATGGGAGAGAGATGAAGAGTATGGAC
EX886885       <-- CATTTGAGGAGGAGCTGTGAGAAGATGGGAGAGAGATGAAGAGTATGGA.
FD561430       <-- CATTCGAGGAGGAGCTGTGAGAAGATGGGAGAGAGATGAAGAGTATGGAG
FD544339       <-- CATTCGAGGAGGAGCTGTGAGAAGATGGGAGAGAGATGAAGAGTATGGAG
EX754570       <-- CATTCGAGGAGGAGCTGTGAGAAGATGGGAGAGAGATGAAGAGTATGGAG
FD972277       <-- CATTCGAGGAGGAGCTGTGAGAAGATGGGAGAGAGATGAAGAGTATGGAG
FD579953       <-- CATTCGAGGAGGAGCTGTGAGAAGATGGGAGAGAGATGAAGAGTATGGAG
EW720329       --> ..................................................
FD546843       --> ..................................................
EY936232       --> ..................................................
EX891168       --> ..................................................
FD552909       --> ..................................................
FD565595       --> ..................................................
FD583839       --> ..................................................
EW719407       --> ..................................................

               1151   -   1201
UN21490        --> AAGAAGACAGAGAGATGAAGAAGGAACTTCATTGTGATTTTGAGTGGTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD556827       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD550953       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD557790       <-- ..................................................  Raphanus raphanistrum subsp. landra
EV548032       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FY432034       <-- AAGAAGACAGAGAGATGAAGAAG...........................  Raphanus sativus cv GSK3-1
FY429985       <-- AAGAAGACAGAGAGATGAAGAAGGAA........................  Raphanus sativus cv GSK3-1
EY940478       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EW715827       <-- AAGAAGACAGAGAGATGAAGAAGGAACTTCATTGTGATTTTGAGTGGCTG  Raphanus sativus var. oleiformis
EW715710       <-- AACAAGACAGAGAGATGAAGAAGGAACTTCATTGTGATTCTGAGTGGTTG  Raphanus sativus var. oleiformis
EX886885       <-- ..................................................  Raphanus sativus var. oleiformis
FD561430       <-- AAGAAGACAGAGAGATGAAGAAGGAACTTCATTGTGATTTTGAGTGGCTG  Raphanus sativus var. oleiformis
FD544339       <-- AACAAGACAGAGAGATGAGGAAGGAACTTCATTGTGATTTTGAGTGGTTG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX754570       <-- AACAAGACAGAGAGATGAGGAAGGAACTTCATTGTGATTTTGAGTGGTTG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD972277       <-- AACAAGACAGAGAGATGAGGAAGGAACTTCATTGTGATTTTGAGTGGTTG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD579953       <-- AAGAAGACAGAGAGATGAAGAAGGAACTTCATTGTGATTTTGAGTGGCTG  Raphanus sativus cv Rat-Tail Radish #3870
EW720329       --> ..................................................  Raphanus sativus var. oleiformis
FD546843       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY936232       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EX891168       --> ..................................................  Raphanus sativus var. oleiformis
FD552909       --> ..................................................  Raphanus raphanistrum subsp. landra
FD565595       --> ..................................................  Raphanus sativus var. oleiformis
FD583839       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EW719407       --> ..................................................  Raphanus sativus var. oleiformis

               1201   -   1251
UN21490        --> TGTTCTGAGTCC
                   ~~~~~~~~~~~~
FD556827       <-- ............
FD550953       <-- ............
FD557790       <-- ............
EV548032       <-- ............
FY432034       <-- ............
FY429985       <-- ............
EY940478       <-- ............
EW715827       <-- TGTTCTcc....
EW715710       <-- TGTcctcc....
EX886885       <-- ............
FD561430       <-- TGTTCTc.....
FD544339       <-- TGTTCTGAGTCC
EX754570       <-- TGTTCTcc....
FD972277       <-- TGTTCTcc....
FD579953       <-- TGTTCTcc....
EW720329       --> ............
FD546843       --> ............
EY936232       --> ............
EX891168       --> ............
FD552909       --> ............
FD565595       --> ............
FD583839       --> ............
EW719407       --> ............