RadishBase

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Alignment for radish unigene UN21509

               1      -     51
UN21509        --> CATATTGTGAGTAACTCCTTTCATAATCACCACCATTACAACAAGACTGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD987274       <-- ..................................................
FD981311       <-- ..................................................
EW716681       <-- ..................................................
EW734406       <-- ..................................................
FD551874       <-- ..................................................
FD564341       <-- ..................................................
EX894202       <-- ..................................................
EY902831       --> CATATTGTGAGTAACTCCTTTCATAATCACCACCATTACAACAAGACTGA
FD945162       --> ..................................................
EX898556       --> ..................................................
EY925692       --> ..................................................
FD572913       --> ..................................................
FD547715       --> ..................................................
EW720767       --> ..................................................
EW738336       --> ..................................................
FD584295       --> ..................................................
EX894122       --> ..................................................
FD977087       --> ..................................................
FD983353       --> ..................................................

               51     -    101
UN21509        --> GGTATGTGTTCAGAGTATCACCAAATCTTAATATGATTATGAAAGACAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD987274       <-- ..................................................
FD981311       <-- ..................................................
EW716681       <-- ..................................................
EW734406       <-- ..................................................
FD551874       <-- ..................................................
FD564341       <-- ..................................................
EX894202       <-- ..................................................
EY902831       --> GGTATGTGTTCAGAGTATCACCAAATCTTAATATGATTATGAAAGACAAT
FD945162       --> ....cGTGTTCAGAGTATCACCAAATCTTAATATGATTATGAAAGACAAT
EX898556       --> ................ATCACCAAATCTTAATATGATTATGAAAGACAAT
EY925692       --> ..................CACCAAATCTTAATATGATTATGAAAGACAAT
FD572913       --> ..................CACCAAATCTTAATATGATTATGAAAGACAAT
FD547715       --> ...................gCCAAATCATAATATGATTATGAAAGACAAT
EW720767       --> ..............................ATATGATTATGAAAGACAAT
EW738336       --> ................................ATGATTATGAAAGACAAT
FD584295       --> ..................................ggTTATGAAAGACAAT
EX894122       --> .........................................ggaagaAAT
FD977087       --> ..................................................
FD983353       --> ..................................................

               101    -    151
UN21509        --> CTTTTAATTACATTTTGTGTGCATCATGAATACAAGAAATTACATAATAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD987274       <-- ..................................................
FD981311       <-- ..................................................
EW716681       <-- ..................................................
EW734406       <-- ..................................................
FD551874       <-- ..................................................
FD564341       <-- ..................................................
EX894202       <-- ..................................................
EY902831       --> CTTTTAATTACATTTTGTGTGCATCATGAATACAAGAAATTACATAATAT
FD945162       --> CTTTTAATTACATTTTGTGTGCATCATGAATACAAGTAATTACATAATAT
EX898556       --> CTTTTAATTACATTTTGTGTGCATCATGAATACAAGAAATTACATAATAT
EY925692       --> TTTTTAATTACATTTTGTGTGCATCATGAATACAAGAAATTACATAATAT
FD572913       --> CTTTTAATTACATTTTGTGTGCATCATGAATACAAGAAATTACATAATAT
FD547715       --> CTTTTAATTACATTTTGTGTGCATCATGAATACAAGAAATTACATAATAT
EW720767       --> TTTTTAATTACATTTTGTGTGCATCATGAATACAAGAAATTACATAATAT
EW738336       --> CTTTTAATTACATTTTGTGTGCATCATGAATACAAGAAATTACATAATAT
FD584295       --> CTTTTAATTACATTTCGTATGCATCATGAATACAAGAAATTACGTAATAT
EX894122       --> CTTTTAATTACATTTTGGGGGCATCATGAATACAAGAAATTACATAATAT
FD977087       --> .....AATTACACTTTGTGTGCATCATGAATACGAGAAATTACATAATAT
FD983353       --> ..................................................

               151    -    201
UN21509        --> GTAGTATCGTCAGTAGGCTACAAACCTGATCGATATATTTACAAACAGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD987274       <-- ...........................GATCGATATATTTACAAACAGAT
FD981311       <-- ...............................................GAT
EW716681       <-- ..................................................
EW734406       <-- ..................................................
FD551874       <-- ..................................................
FD564341       <-- ..................................................
EX894202       <-- ..................................................
EY902831       --> GTAGTATCGTCAGTAGGCTACAAACCTGATCGATATATTTACAAACAGAT
FD945162       --> GTAGTATCGTCAGTAGGCTACAAACCTGATCGATATATTTACAAACAGAT
EX898556       --> GTAGTATCGTCAGTAGGCTACAAACCTGATCGATATATTTACAAA-AGAT
EY925692       --> GTAGTATCGTCAGTAGGCTACAAACCTGATCGATATATTTACAAACAGAT
FD572913       --> ATAGTATCGTCAGTAGGCTACAAACCTGATCGATATATTTACAAACAGAT
FD547715       --> GTAGTATCGTCAGTAGGCTACAAACCTGATCGATATATTTACAAACAGAT
EW720767       --> GTAGTATCGTCAGTAGGCTACAAACCTGATCGATATATTTACAAACAGAT
EW738336       --> GTAGTATCGTCAGTAGGCTACAAACCTGATCGATATATTTACAAACAGAT
FD584295       --> ATAGTATCGTCAGTAGGCTACAAACCTGATCGATATATTTACAAACAGAT
EX894122       --> GTAGTATCGTCAGTAGGCTACAAACCTGATCGATATATTTACAAACAGAT
FD977087       --> GTAGTATCGTCAGTAGGCTACAAACCTGATCGATATATTTACAAACAGAT
FD983353       --> ..................................................

               201    -    251
UN21509        --> TAAAAACTGTTAAGAGTTTTCGATTATATTAACAAATATATATACGAGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD987274       <-- TAAAAACTGTTAAGAGTTTTCGATTATATTAACAAATATATATACGAGGA
FD981311       <-- TAAAAACTGTTAAGAGTTT-CGATTATATTAACAAATATATATACGAGGA
EW716681       <-- ..................................................
EW734406       <-- ..................................................
FD551874       <-- ..................................................
FD564341       <-- ..................................................
EX894202       <-- ..................................................
EY902831       --> TAAAAACTGTTAAAAGTTTTTGATTATATTAACAAATATATATACGAGGA
FD945162       --> TAAAAACTGTTAAGAGTTTTCGATTATATTAACAAATATATATACGAGGA
EX898556       --> TAAAAACTGTTAAGAGTTTTCGATTATATTAACAAATATATATACGAGGA
EY925692       --> TAAAAACTGTTAAGAGTTTTCGATTATATTAACAAATATATATACGAGGA
FD572913       --> TAAAAACTGTTAAGAGTTTTCGATTATATTAACAAATATATATACGAGGA
FD547715       --> TAAAAACTGTTAAGAGTTTTCGATTATATTAACAAATATATATACGAGGA
EW720767       --> TAAAAACTGTTAAGAGTTTTCGATTATATTAACAAATATATATACGAGGA
EW738336       --> TAAAAACTGTTAAGAGTTTTCGATTATATTAACAAATATATATACGAGGA
FD584295       --> TAAAAACTGTTAAGAGTTTTCGATTATATTAACAAATATATATACGAGGA
EX894122       --> TAAAAACTGTTAAGAGTTTTCGATTATATTAACAAATATATATACGAGGA
FD977087       --> TAAAAACTGTTAAGAGTTTTCGATTATATTAACAAATATATATACGAGGA
FD983353       --> ................TTTTCGATTATATTAACAAATATATATACGAGGA

               251    -    301
UN21509        --> AAGCTAACAGTTGAATTTATAGCGGTACTAGCAGTTCCCTGGTCGGTTAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD987274       <-- AAGCTAACAGTTGAATTTATAGCGGTACTAGCAGTTCCCTGGTCGGTTAT
FD981311       <-- AAGCTAACAGTTGAATTTATAGCGGTACTAGCAGTTCCCTGGTCGGTTAT
EW716681       <-- ...........TGAATTTATAGCGGTACTAGCAGTTCCCTGGTCGACTAT
EW734406       <-- ..................................................
FD551874       <-- ..................................................
FD564341       <-- ..................................................
EX894202       <-- ..................................................
EY902831       --> AAGCTAACAGTTGAATTTATAGCGGTACTAGCAGTTCCCTGGTCGGTTGT
FD945162       --> AAGCTAACAGTTGAATTTATAGCGGTACTAGCAGTTCCCTGGTCGGTTAT
EX898556       --> AAGCTAACAGTTGAATTTATAGCGGTACTAGCAGTTCCCTGGTCGGTTAT
EY925692       --> AAGCTAACAGTTGAATTTATAGCGGTACTAGCAGTTCCCTGGTCGATTAT
FD572913       --> AAGCTAACAGTTGAATTTATAGCGGTACTAGCAGTTCCCTGGTCGGTTAT
FD547715       --> AAGCTAACAGTTGAATTTATAGCGGTACTAGCAGTTCCCTGGTCGGTTAT
EW720767       --> AAGCTAACAGTTGAATTTATAGCGGTACTAGCAGTTCCCTGGTCGACTAT
EW738336       --> AAGCTAACAGTTGAATTTATAGCGGTACTAGCAGTTCCCTGGTCGGTTAT
FD584295       --> AAGCTAACAGTTGAATTTATAGCGGTACTAGCAGTTCCCTGGTCGATTAT
EX894122       --> AAGCTAACAGTTGAATTTATAGCGGTACTAGAAGTTCCCTGGTCGGTTAT
FD977087       --> AAGCTAACAGTTGAATTTATAGCGGTACTAGCAGTTCCCTGGTCGGTTAT
FD983353       --> AAGCTAACAGTTGAATTTATAGCGGTACTAGCAGTTCCCTGGTCGGTTAT

               301    -    351
UN21509        --> ACTTTGGAGGCAGAGATGGACACTGTTCATTCATATGCGTATAAGGTTCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD987274       <-- ACTTTGGAGGCAGAGATGGACACTGTTCATTCATATGCGTATAAGGTTCC
FD981311       <-- ACTTTGGAGGCAGAGATGGACACTGTTCATTCATATGCGTATAAGGTTCC
EW716681       <-- ACTTTGGAGGCAGAGATGGACACTGTTCATTCATATGCGTATAAGGTTCC
EW734406       <-- ..................................................
FD551874       <-- ..................................................
FD564341       <-- ..................................................
EX894202       <-- ..................................................
EY902831       --> ACTTGGGAGGCAAAAATGGACATTGTTCATTCATATGCGTATAAGGTTCC
FD945162       --> ACTTTGGAGGCAGAAATGGACACTGTTCATTCATATGCGTATAAGGTTCC
EX898556       --> ACTTTGGAGGCAGAGATGGACACTGTTCATTCATATGCGTATAAGGTTCC
EY925692       --> ACTTTGGAGGCAGAGATGGACACTGTTCATTCATATGCGTATAAGGTTCC
FD572913       --> ACTTTGGAGGCAGAGATGGGCACTGTTCATTCATATGCGTATAAGGTTCC
FD547715       --> ACTTTGGAGGCAGAGATGGACACTGTTCATTCATATGCGTATAAGGTTCC
EW720767       --> ACTTTGGAGGCAGAGATGGACACTGTTCATTCATATGCGTATAAGGTTCC
EW738336       --> ACTTTGGAGGCAGAGATGGACACTGTTCATTCATATGCGTATAAGGTTCC
FD584295       --> ACTTTGGAGGCAGAAATGGACACTGTTCATTCATATGCGTATAAGGTTCC
EX894122       --> ACTTTGGAGGCAGAGATGGACACTGTTCATTCATATGAGTATAAGGTTCC
FD977087       --> ACTTTGGAGGCAGAGATGGACACTGTTCATTCATATGCGTATAAGGTTCC
FD983353       --> ACTTTGGAGGCAGAGATGGACACTGTTCATTCATATGCGTATAAGGTTCC

               351    -    401
UN21509        --> ATAGTGTTGTAACCAGGAAGTTCCATTCTATATTTCCCTAGTATCTGACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD987274       <-- ATAGTGTTGTAACCAGGAAGTTCCATTCTATATTTCCCTAGTATCTGACA
FD981311       <-- ATAGTGTTGTAACCAGGAAGTTCCATTCTATATTTCCCTAGTATCTGACA
EW716681       <-- ATAGTGTTGTAACCAGGAAGTTCCATTCTATATTTCCCTAGTATCTGGCA
EW734406       <-- .....................................CTAGTATCTGACA
FD551874       <-- ........................................GTATCTGACA
FD564341       <-- ........................................GTATCTGACA
EX894202       <-- ..................................................
EY902831       --> ATAGTGTTGTAACCAGGAAGTTCCATTCTATACTTCCCTAGTATCTGACA
FD945162       --> ATAGTGTTGTAACCAGGAAGTTCCATTCTATATTTCCCTAGTATCTGACA
EX898556       --> CTAGTGTTGTAACCAGGAAGTTCCATTCTATATTTCCCTAGTATCTGACA
EY925692       --> ATAGTGTTGTAACCAGGAAGTTCCATTCTATATTTCCCTAGTATCTGACA
FD572913       --> ATAGTGTTGTAACCAGGAAGTTCCATTCTATATTTCCCTAGTATCTGACA
FD547715       --> ATAGTGTTGTAACCAGGAAGTTCCATTCTATATTTCCCTAGTATCTGACA
EW720767       --> ATAGTGTTGTAACCAGGAAGTTCCATTCTATATTTCCCTAGTATCTGGCA
EW738336       --> ATAGTGTTGTAACCAGGAAGTTCCATTCTATATTTCCCTAGTATCTGACA
FD584295       --> ATAGTGTTGTAACCAGGAAGTTCCATTCTATGTTTCCCTAGTATCTGACA
EX894122       --> ATAGTGTTGTAACCAGGAAGTTCCATTCTATATTTCCCTAGTATCTGACA
FD977087       --> ATAGTGTTGTAACCAGGAAGTTCCATTCTATATTTCCCTAGTATCTGACA
FD983353       --> ATAGTGTTGTAACCAGGAAGTTCCATTCTATATTTCCCTAGTATCTGACA

               401    -    451
UN21509        --> GTAAGGAAGCTTCACATTGTCATTGTCATTGCACCATTTTGGAAGATGGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD987274       <-- GTAAGGAAGCTTCACATTGTCATTGTCATTGCACCATTTTGGAAGATGGC  Raphanus raphanistrum subsp. landra
FD981311       <-- GTAAGGAAGCTTCACATTGTCATTGTCATTGCACCATTTTGGAAGATGGC  Raphanus raphanistrum subsp. raphanistrum (NY)
EW716681       <-- GTAAGGAAGCTTCACATTGTCATTGTCATTGCACCATTTTGGAAGACGAC  Raphanus sativus var. oleiformis
EW734406       <-- GTAAGGAAGCTTCACATTGTCATTGTCATTGCACCATTTTGGAAGATGGC  Raphanus sativus cv Rat-Tail Radish #3870
FD551874       <-- GTAAGGAAGCTTCACATTGTCATTGTCATTGCACCATTTTGGAAGATGGC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD564341       <-- GTAAGGAAGCTTCACATTGTCATTGTCATTGCACCATTTTGGAAGACGAC  Raphanus sativus var. oleiformis
EX894202       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY902831       --> GTAAGGAAGCTTCACACTGTCATTGTCATTGCACCATTTTGGAAGACGAC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD945162       --> GTAAGGAAGCTTCACATTGTCATTGTCATTGCACCATTTTGGAAGACGGC  Raphanus sativus cv Early Scarlet Globe
EX898556       --> GTAAGGAAGCTTCACATTGTCATTGTCATTGCACCATTTTGGAAGACGGC  Raphanus sativus cv Early Scarlet Globe
EY925692       --> GTAAGGAAGCTTCACATTGTCATTGTCATTGCACCATTTTGGAAGACGAC  Raphanus sativus var. oleiformis
FD572913       --> GTAAGGAAGCTTCACATTGTCATTGTCATTGCACCATTTTGGAAGACGGC  Raphanus sativus cv Early Scarlet Globe
FD547715       --> GTAAGGAAGCTTCACATTGTCATTGTCATTGCACCATTTTGGAAGATGGC  Raphanus raphanistrum subsp. raphanistrum (NY)
EW720767       --> GTAAGGAAGCTTCACATTGTCATTGTCATTGCACCATTTTGGAAGACGAC  Raphanus sativus var. oleiformis
EW738336       --> GTAAGGAAGCTTCACATTGTCATTGTCATTGCACCATTTTGGAAGATGGC  Raphanus sativus cv Rat-Tail Radish #3870
FD584295       --> GTAAGGAAGCTTCACATTGTCATTGTCATTGCACCATTTTGGAAGACGAC  Raphanus sativus cv Rat-Tail Radish #3870
EX894122       --> GTAAGGAAGCTTCACATTGTCATTGTCATTGCACCATTTTGGAAGATGGC  Raphanus sativus var. oleiformis
FD977087       --> GTAAGGAAGCTTCACATTGTCATTGTCATTGCACCATTTTGGAAGATGGC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD983353       --> GTAAGGAAGCTTCACATTGTCATTGTCATTGCACCATTTTGGAAGATGGC  Raphanus raphanistrum subsp. landra

               451    -    501
UN21509        --> TTGCATTGTTCTCGAAGAAGTTTAGCATGTAAGCATCTTTCAGCGTGAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD987274       <-- TTGCATTGTTCTCGAAGAAGTTTAGCATGTAAGCATCTTTCAGCGTGAAC
FD981311       <-- TTGCATTGTTCTCGAAGAAGTTTAGCATGTAAGCATCTTTCAGCGTGAAC
EW716681       <-- TTGCATTGTTCTCGAAGAAGTTTAGCATGTAAGCATCTTTGAGCGTGAAC
EW734406       <-- TTGCATTGTTCTCGAAGAAGTTTAGCATGTAAGCATCTTTCAGCGTGAAC
FD551874       <-- TTGCATTGTTCTCGAAGAAGTTTAGCATGTAAGCATCTTTCAGCGTGAAC
FD564341       <-- TTGCATTGTTCTCGAAGAAGTTTAGCATGTAAGCATCTTTGAGCGTGAAC
EX894202       <-- ..................................................
EY902831       --> TTGCATTGTTCTCGAAGAAGTTTAGCATGTAAGCATCTTTGAGCGTGAAC
FD945162       --> TTGCATTGTTCTCGAAGAAGTTTAGCATGTAAGCATCTTTCAGCGTGAAC
EX898556       --> TTGCATTGTTCTCGAAGAAGTTTAGCATGTAAGCATCTTTCAGCGTGAAC
EY925692       --> TTGCATTGTTCTCGAAGAAGTTTAGCATGTAAGCATCTTTGAGCGTGAAC
FD572913       --> TTGCATTGTTCTCGAAAAAGTTTAGCATGTAAGCATCTTTCAGCGTGAAC
FD547715       --> TTGCATTGTTCTCGAAGAAGTTTAGCATGTAAGCATCTTTCAGCGTGAAC
EW720767       --> TTGCATTGTTCTCGAAGAAGTTTAGCATGTAAGCATCTTTGAGCGTGAAC
EW738336       --> TTGCATTGTTCTCGAAAAAGTTTAGCATGTAAGCATCTTTCAGCGTGAAC
FD584295       --> TTGCATTGTTCTCGAAGAAGTTTAGCATGTAAGCATCTTTGAGCGTGAAC
EX894122       --> TTGCATTGTTCTCGAAGAAGTTTAGCATGTAAGCATCTTTCAGCGTGAAC
FD977087       --> TTGCATTGTTCTCGAAGAAGTTTAGCATGTAAGCATCTTTCAGCGTGAAC
FD983353       --> TTGCATTGTTCTCGAAGAAGTTTAGCATGTAAGCATCTTTCAGCGTGAAC

               501    -    551
UN21509        --> TCTGTGACTTGAATAGAATTAGCCAATGAGCCGAATAGGCCAGCTTCTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD987274       <-- TCTGTGACTTGAATAGAATTAGCCAATGAGCCGAATAGGCCAGCTTCTTT
FD981311       <-- TCTGTGACTTGAATAGAATTAGCCAATGAGCCGAATAGGCCAGCTTCTTT
EW716681       <-- TCTGTGACTTGAATAGAACTAGCCAATGAGCCGAATAGGCCAGCTTCTTT
EW734406       <-- TCTGTGACTTGAATAGAATTAGCCAATGAGCCGAATAGGCCAGCTTCTTT
FD551874       <-- TCTGTGACTTGAATAGAATTAGCCAATGAGCCGAATAGGCCAGCTTCTTT
FD564341       <-- TCTGTGACTTGAATAGAACTAGCCAATGAGCCGAATAGGCCAGCTTCTTT
EX894202       <-- ..................................................
EY902831       --> TCTGTGACTTGAATAGAACTAGCCAATGAGCCGAATAGGCCAGCTTCTTT
FD945162       --> TCTGTGACTTGAATAGAATTAGTCAATGAGCCGAATAGGCCAGCTTCTTT
EX898556       --> TCTGTGACTTGAATAGAATTAGTCAATGAGCCGAATAGGCCAGCTTCTTT
EY925692       --> TCTGCGACTTGAATAGAACTAGCCAATGAGCCGAATAGGCCAGCTTCTTT
FD572913       --> TCTGTGACTTGAATAGAATTAGTCAAAGAGCCGAATAGGCCAGCTTCTTT
FD547715       --> TCTGTGACTTGAATAGAATTAGCCAATGAGCCGAATAGGCCAGCTTCTTT
EW720767       --> TCTGTGACTTGAATAGAACTAGCCAATGAGCCGAATAGGGCAGCTTCTTT
EW738336       --> TCTGTGACTTGAATAGAATTAGCCAATGAGCCGAATAGGCCAGCTTCTTT
FD584295       --> TCTGTGACTTGAATAGAATTAGCCAATGAGCCGAATAGGCCAGCTCCTTT
EX894122       --> TCTGTGACTTGAATAGAATTAGCCAATGAGCCGAATAGGCCAGCTTCTTT
FD977087       --> TCTGTGACTTGAATAGAATTAGCCAATGAGCCGAATAGGCCAGCTTCTTT
FD983353       --> TCTGTGACTTGAATAGAATTAGCCAATGAGCCGAATAGGCCAGCTTCTTT

               551    -    601
UN21509        --> GTACATTTCGAGTATGAAAGCGATGCACGAGGTTGATTTACCATCGCTGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD987274       <-- GTACATTTCGAGTATGAAAGCGATGCACGAGGTTGATTTACCATCGCTGT  Raphanus raphanistrum subsp. landra
FD981311       <-- GTACATTTCGAGTATGAAAGCGATGCACGAGGTTGATTTACCATCGCTGT  Raphanus raphanistrum subsp. raphanistrum (NY)
EW716681       <-- GTACATTTCAAGGATGAAAGCAATGCACGAGGTTGATTTGCCATCGCTGT  Raphanus sativus var. oleiformis
EW734406       <-- GTACATTTCGAGTATGAAAGCGATGCACGAGGTTGATTTACCATCGCTGT  Raphanus sativus cv Rat-Tail Radish #3870
FD551874       <-- GTACATTTCGAGTATGAAAGCGATGCACGAGGTTGATTTACCATCGCTGT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD564341       <-- GTACGTTTCAAGGATGAAAGCAATGCACGAGGTTGATTTGCCATCGCTGT  Raphanus sativus var. oleiformis
EX894202       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY902831       --> GTACATTTCAAGGATGAAAGCAATGCACGAGGTTGATTTACCATCGCTGT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD945162       --> GTACATTTCGAGGATGAAAGCGATGCACGAGGTTGATTTACCATCGCTGT  Raphanus sativus cv Early Scarlet Globe
EX898556       --> GTACATTTCGAGGATGAAAGCGATGCACGAGGTTGATTTACCATCGCTGT  Raphanus sativus cv Early Scarlet Globe
EY925692       --> GTACATTTCAAGGATGAAAGCAATGCACGAGGTTGATTTGCCATCGCTGT  Raphanus sativus var. oleiformis
FD572913       --> GTACATTTCGAGGATGGAAGCGATGCACGAGGTTGATTTACCATCGCTGT  Raphanus sativus cv Early Scarlet Globe
FD547715       --> GTACATTTCGAGTATGAAAGCGATGCACGAGGTTGATTTACCATCGCTGT  Raphanus raphanistrum subsp. raphanistrum (NY)
EW720767       --> GTACATTTCAAGGATGAAAGCAATGCACGAGGTTGATTTGCCATCGCTGT  Raphanus sativus var. oleiformis
EW738336       --> GTACATTTCGAGTATGAAAGCGATGCACGAGGTTGATTTACCATCGCTGT  Raphanus sativus cv Rat-Tail Radish #3870
FD584295       --> GTACATTTCGAGGATGAAAGCGATGCACGAGGTTGATTTACCATCGCTGT  Raphanus sativus cv Rat-Tail Radish #3870
EX894122       --> GTACATTTCGAGTATGAAAGCGATGCACGAGGTTGATTTACCATCGCTGT  Raphanus sativus var. oleiformis
FD977087       --> GTACATTTCGAGTATGAAAGCGATGCACGAGGTTGATTTACCATCGCTGT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD983353       --> GTACATTTCGAGTATGAAAGCGATGCACGAGGTTGATTTACCATCGCTGT  Raphanus raphanistrum subsp. landra

               601    -    651
UN21509        --> AGATCCAGTCGTCTTGTTCGGGTACAGTCAGTAACTTGTCAAAAGAAGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD987274       <-- AGATCCAGTCGTCTTGTTCGGGTACAGTCAGTAACTTGTCAAAAGAAGAT
FD981311       <-- AGATCCAGTCGTCTTGTTCGGGTACAGTCAGTAACTTGTCAAAAGAAGAT
EW716681       <-- AGATCCAGTCGTCTTGTTCGGGTACAGTCAGTAACTTGTCAAAAGAAGAT
EW734406       <-- AGATCCAGTCGTCTTGTTCGGGTACAGTCAGTAACTTGTCAGAAGAAGAT
FD551874       <-- AGATCCAGTCGTCTTGTTCGGGTACAGTCAGTAACTTGTCAAAAGAAGAT
FD564341       <-- AGATCCAGTCGTCTTGTTCGGGTACAGTCAGTAACTTGTCAAAAGAAGAT
EX894202       <-- ..................................................
EY902831       --> A.................................................
FD945162       --> AGATCCAGTCGTCTTGTTCGGGTATAGTCAGTAATTTGTCAAAAGAAGAT
EX898556       --> AGATCCAGTCGTATTGTTCGGGTATAGTCAGTAATTTGTCAAAAGAAGAT
EY925692       --> AGATCCAGTCGTCTTGTTCGGGTACAGTCAGTAACTTGTCAAAAGAAGAT
FD572913       --> AGATCCAGTCGTCTTGTTCGGGTATAGTCAGTAATTTGTCAAAAGAAGAT
FD547715       --> AGA...............................................
EW720767       --> AGATCCAGTCGTCTTGTTCGGGTACAGTCAGTAACTTGTCAAAAGAAGAT
EW738336       --> AGATCCAGTCGTCTTGTTCGGGTACAGTCAGTAACTTGTCAgaa......
FD584295       --> ATATCCAGTCGTCTTGTTCGGGTACAGTCAGTAACTTGTCAAAAGAAGAT
EX894122       --> AGATCCAGTCGTCTTGTTCGGGTACAGTCAGTAACTTGTCAAAAGAAGAT
FD977087       --> AGATCCAGTCGTCTTGTTCGGGTACAGTCAGTAACTTGTCAAAAGAAGAT
FD983353       --> AGATCCAGTCGTCTTGTTCGGGTACAGTCAGTAACTTGTCAAAAGAAGAT

               651    -    701
UN21509        --> CCACGTTTCTCTACTTCTACCAGTACATCTGAAAGACCAAGACCCTCTGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD987274       <-- CCACGTTTCTCTACTTATACCAGTA.........................  Raphanus raphanistrum subsp. landra
FD981311       <-- CCACGTTTCTCTACTTCTACCAGTACATCTGAAAGACCAAGACCCTCTGT  Raphanus raphanistrum subsp. raphanistrum (NY)
EW716681       <-- CCACGCTTCTCTACTTCTACCAGTACATCTGAAAGACCAAGACCCTCTGT  Raphanus sativus var. oleiformis
EW734406       <-- CCACGTTTCTCTACTTCTACCAGTACATCTGAAAGACCAAGACCCTCTGT  Raphanus sativus cv Rat-Tail Radish #3870
FD551874       <-- CCACGTTTCTCTACTTCTACCAGTACATCTGAAAGACCAAGACCCTCTAT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD564341       <-- CCACGCTTCTCTACTTCTACCAGTACATCTGAAAGACCAAGACCCTCTGT  Raphanus sativus var. oleiformis
EX894202       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY902831       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD945162       --> CCACGTTTCTCTACTTCAACTAGTACAT......................  Raphanus sativus cv Early Scarlet Globe
EX898556       --> CCACGTTTCTCTACTTCAACTAGTACATCAGAAAGACCAAGACCCTCTGT  Raphanus sativus cv Early Scarlet Globe
EY925692       --> CCACGCTTCTCTACTTCTACCAGTACATCTGAAAGACCAAGACCCTCTGT  Raphanus sativus var. oleiformis
FD572913       --> CCACGTTTCTCTACTTCAACTAGTACATCAGAAAGACCAAGACCCTCTGT  Raphanus sativus cv Early Scarlet Globe
FD547715       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EW720767       --> CCACGCTTCTCTACTTCTACCAGTACATCTGAAAGACCAAGACCCTCTGT  Raphanus sativus var. oleiformis
EW738336       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD584295       --> CCACGTTTCTCTACTTCAACTAGTACATCAGAAAGACCAAGACCCTCTGT  Raphanus sativus cv Rat-Tail Radish #3870
EX894122       --> CCACGTTTCTCTACTTCTACCAGTACATCTGAAAGACCAAGACCCTCTGT  Raphanus sativus var. oleiformis
FD977087       --> CCACGTTTCTCTACTTCTACCAGTACATCTGAAAGACCAAGACCCTCTGT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD983353       --> CCACGTTTCTCTACTTATACCAGTACATCTG...................  Raphanus raphanistrum subsp. landra

               701    -    751
UN21509        --> TCCAAGCCGCTTGTTCAAGGCTTCATTCCACATATTAGCTGCATACTCAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD987274       <-- ..................................................
FD981311       <-- TCCAAGCCGCTTGTTCAAGGCTTCATTCCACATATTAGCTGCATACTCAG
EW716681       <-- TCCAAGCCGCTTGTTCAAGGCTTCATTCCACATATTAGCTGCATACTCAG
EW734406       <-- TCCAAGCCGCTTGTTCAAGGCTTCATTCCACATATTAGCTGCATACTCAG
FD551874       <-- TCCAAGCCGCTTGTTCAAGGCTTCATTCCACATATTAGCTGCATACTCAG
FD564341       <-- TCCAAGCCGCTTGTTCAAGGCTTCATTCCACATATTAGCTGCATACTCAG
EX894202       <-- ..................................................
EY902831       --> ..................................................
FD945162       --> ..................................................
EX898556       --> TCCAAGCCGCTTGTTCAAGGCTTCATTCCACATATTAGCAGCATACTCAG
EY925692       --> TCCAAGCCGCTTGTTCAAGGCTTCATTCCACATATTAGCTGCATACTCAG
FD572913       --> TCCAAGCCGCTTGTTCAAGGCTTCATTCCACATATTAGCTGCATACTCAG
FD547715       --> ..................................................
EW720767       --> TCCAAGCCGCTTGTTCAAGGCTTCATTCCACATATTAGCTGCATACTCAG
EW738336       --> ..................................................
FD584295       --> TCCAAGCCGCTTGTTCAAGGCTTCATTCCACATATTAGCAGCATACTCAG
EX894122       --> TCCGAGACGCTTGTTCAAGGCTTCATTCCACATATTAGCAGCATACTCAG
FD977087       --> TCCAAGCCGCTTGTTCAAGGCTTCATTCCACATATTAGCTGCATACTCAG
FD983353       --> ..................................................

               751    -    801
UN21509        --> GCTGCAATTTGTTCCAAACAGTCATGAAAGAAGCAACAAGATGAGCATCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD987274       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD981311       <-- GCTGCAATTTGTTCCAAACAGTCATGAATGAAGCAACAAGATGAGCATCT  Raphanus raphanistrum subsp. raphanistrum (NY)
EW716681       <-- GCTGCAATTTGTTCCAAACAGTCATGAAAGAAGCAACAAGATGAGCATCT  Raphanus sativus var. oleiformis
EW734406       <-- GCTGCAATTTGTTCCAAACAGTCATGAATGAAGCAACAAGATGAGCATCT  Raphanus sativus cv Rat-Tail Radish #3870
FD551874       <-- GCTGCAATTTGTTCCAAACAGTCATGAATGAAGCAACAAGATGAGCATCT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD564341       <-- GCTGCAATTTGTTCCAAACAGTCATGAAAGAAGCAACAAGATGAGCATCT  Raphanus sativus var. oleiformis
EX894202       <-- ........tttTTCCAAACAGTCATGAAAGAGGCAACAAGATGAGCATCT  Raphanus sativus cv Early Scarlet Globe
EY902831       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD945162       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EX898556       --> GCTGCAATTTGTTCCAAACAGTCATGAAAGAGGCAACAAGATGAGCATCT  Raphanus sativus cv Early Scarlet Globe
EY925692       --> GCTGCAATTTGTTCCAAACAGTCATGAAAGAAGCAACAAGATGAGCATCT  Raphanus sativus var. oleiformis
FD572913       --> GCTGCAATTTGTTCCAAACAGTCATGAAAGAGGCAACA............  Raphanus sativus cv Early Scarlet Globe
FD547715       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EW720767       --> GCTGCAATTTGTTCCAAACAGTCATGAAAGAAGCAACAAGATGAGCATCT  Raphanus sativus var. oleiformis
EW738336       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD584295       --> GCTGCAATTTGTTCCAAACAGTCATGAAAGAAGCAACAAGATGAGCATCT  Raphanus sativus cv Rat-Tail Radish #3870
EX894122       --> GCTGCAATTTGTTCCAAACAGTCATGAAAGAGGCAACAAGATGAGCATCT  Raphanus sativus var. oleiformis
FD977087       --> GCTGCAATTTGTTCCAAACAGTCATGAATGAAGCAACAAGATGAGCATCT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD983353       --> ..................................................  Raphanus raphanistrum subsp. landra

               801    -    851
UN21509        --> ATAGGAGGAGGGTAGTTTGCAGTAACGGTATCGATCCAGGCAAAAATCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD987274       <-- ..................................................
FD981311       <-- ATAGGAGGAGGGTAGTTTGCAGTAACGGTATCGATCCAGGCAAAAATCAA
EW716681       <-- ATAGGAGGAGGGTAGTTTGCAGTAACGGTATCGATCCAGGCAAAAATCAA
EW734406       <-- ATAGGAGGAGGGTAGTTTGCAGTAACGGTATCGATCCAGGCAAAAATCAA
FD551874       <-- ATAGGAGGAGGGTAGTTTGCAGTAACGGTATCGATCCAGGCAAAAATCAA
FD564341       <-- ATAGGAGGAGGGTAGTTTGCAGTAACGGTATCGATCCAGGCAAAAATCAA
EX894202       <-- ATAGGAGGAGGGTAGTTTGCAGTAACGGTATCGATCCAGGCAAAAATCAA
EY902831       --> ..................................................
FD945162       --> ..................................................
EX898556       --> ATAGGAGGAGGGTAGTTTGCAGTAA.........................
EY925692       --> ATAGGAGGAGGGTAGTTTGCAGTAACGGTATC..................
FD572913       --> ..................................................
FD547715       --> ..................................................
EW720767       --> ATAGGAGGAGGGTAGTTTGCAGTAA.........................
EW738336       --> ..................................................
FD584295       --> ATAGGAGGAGGGTAGTTTGCAGTAACGGTATCGA................
EX894122       --> ATAGGAGGAGGGTAGTTTGCAGTAACGGTATCGATCCAGGCAAAAATCAA
FD977087       --> ATAGGAGGAGGGTAGTTTGCAGTAACGGTATC..................
FD983353       --> ..................................................

               851    -    901
UN21509        --> GTTGTGATAACCATATGGTTTATTCTCCATGCTCCGAGCATATTCCCACG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD987274       <-- ..................................................
FD981311       <-- GTTGTGATAACCATATGGTTTATTCTCCATGCTCCGAGCATATTCCCACG
EW716681       <-- GTTGTGATAACCATATGGTTTATTCTCCATGCTCCGAGCATATTCCCACG
EW734406       <-- GTTGTGATAACCATATGGTTTATTCTCCATGCTCCGAGCATATTCCCACG
FD551874       <-- GTTGTGATAACCATATGGTTTATTCTCCATGCTCCGAGCATATTCCCACG
FD564341       <-- GTTGTGGTAACCATATGGTTTATTCTCCATGCTCCGAGCATATTCCTACG
EX894202       <-- GTTGTGGTAACCATATGGTTTATTCTCCATGCTGCGAGCATATTCCCACG
EY902831       --> ..................................................
FD945162       --> ..................................................
EX898556       --> ..................................................
EY925692       --> ..................................................
FD572913       --> ..................................................
FD547715       --> ..................................................
EW720767       --> ..................................................
EW738336       --> ..................................................
FD584295       --> ..................................................
EX894122       --> GTTGTGATAACCATATGGTTTATTCTCCATGCTGCGAGTATATTCCCACG
FD977087       --> ..................................................
FD983353       --> ..................................................

               901    -    951
UN21509        --> CAGCAGTGACGTTGAACTTAGCACGAACATCAGGATGCAAAGGTAAGAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD987274       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD981311       <-- CAGCAGTGACGTTc....................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EW716681       <-- CAGCAGTAACGTTGAACTTAGCACGAACATCAGGATGCAAAGGTAAGAAT  Raphanus sativus var. oleiformis
EW734406       <-- CAGCAGTGACGTTGAACTTAGCACGAACATCAGGATGCAA-GGTAAGAAT  Raphanus sativus cv Rat-Tail Radish #3870
FD551874       <-- CAGCAGTGACGTTGAACTTAGCACGAACATCAGGATGCAAAGGTAAGAAT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD564341       <-- CAGCAGTAACGTTGAACTTAGCACGAACATCAGGATGCAAAGGTAAGAAT  Raphanus sativus var. oleiformis
EX894202       <-- CAGCAGTGACGTCGAACTTAGCACGAACATCAGGATGCAAAGGTAAGAAT  Raphanus sativus cv Early Scarlet Globe
EY902831       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD945162       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EX898556       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EY925692       --> ..................................................  Raphanus sativus var. oleiformis
FD572913       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD547715       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EW720767       --> ..................................................  Raphanus sativus var. oleiformis
EW738336       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD584295       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EX894122       --> CAGCAGTAACGTTGAACTTAACACGAACA.....................  Raphanus sativus var. oleiformis
FD977087       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD983353       --> ..................................................  Raphanus raphanistrum subsp. landra

               951    -   1001
UN21509        --> GCAATCTGAGGATTCGAGTCATCTTTCTTTTGTTCAAACTCCCACC-ACT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD987274       <-- ..................................................
FD981311       <-- ..................................................
EW716681       <-- GCAATCTGAGGATTCGAGTCATCTTTCTTTTGTTCAAACTCCCACC-ACT
EW734406       <-- GCAATCTGAGGATTCGAGTCATCTTTCTTTTGTTCAAACTCCCACC-ACT
FD551874       <-- GCAATCTGAGGATTCGAGTCATCTTTCTTTTGTTCAAACTCCCACC-ACT
FD564341       <-- GCAATCTGAGGATTCGAGTCc.............................
EX894202       <-- GCAATCTGAGGATTCGAGTCATCTTTCTTTTGTTCAAACTCCCACCCACT
EY902831       --> ..................................................
FD945162       --> ..................................................
EX898556       --> ..................................................
EY925692       --> ..................................................
FD572913       --> ..................................................
FD547715       --> ..................................................
EW720767       --> ..................................................
EW738336       --> ..................................................
FD584295       --> ..................................................
EX894122       --> ..................................................
FD977087       --> ..................................................
FD983353       --> ..................................................

               1001   -   1051
UN21509        --> CCTCCCATGGTAATATCGCTATTACATCTTCTCCCTTGTCGTTTTCATTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD987274       <-- ..................................................
FD981311       <-- ..................................................
EW716681       <-- CCTCCCATGGTAAGATCc................................
EW734406       <-- CCTCCCATGGTAATATCGCTATTACATCTTCTCCCTTGTCGTTTTCATTA
FD551874       <-- CCTCCCATGGTAATATCGCTATTACATCTTCc..................
FD564341       <-- ..................................................
EX894202       <-- CCTCCCATGGTAATATCGCTATTACATCTTCTCCCTTGTCGTTTTCATTA
EY902831       --> ..................................................
FD945162       --> ..................................................
EX898556       --> ..................................................
EY925692       --> ..................................................
FD572913       --> ..................................................
FD547715       --> ..................................................
EW720767       --> ..................................................
EW738336       --> ..................................................
FD584295       --> ..................................................
EX894122       --> ..................................................
FD977087       --> ..................................................
FD983353       --> ..................................................

               1051   -   1101
UN21509        --> CCGGACTCACCAATCCACAGCTTCCCTTGTGAGTCTCTCAAAAAGACAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD987274       <-- ..................................................
FD981311       <-- ..................................................
EW716681       <-- ..................................................
EW734406       <-- CCGGACTCACCcc.....................................
FD551874       <-- ..................................................
FD564341       <-- ..................................................
EX894202       <-- CCGGACTCACCAATCCACAGCTTCCCTTGTGAGTCTCTCAAAAAGACAGC
EY902831       --> ..................................................
FD945162       --> ..................................................
EX898556       --> ..................................................
EY925692       --> ..................................................
FD572913       --> ..................................................
FD547715       --> ..................................................
EW720767       --> ..................................................
EW738336       --> ..................................................
FD584295       --> ..................................................
EX894122       --> ..................................................
FD977087       --> ..................................................
FD983353       --> ..................................................

               1101   -   1151
UN21509        --> TGAATGACCAGCGTAAGCCCCACTCACCCACTTCTCAAGGGTCTCAAAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD987274       <-- ..................................................
FD981311       <-- ..................................................
EW716681       <-- ..................................................
EW734406       <-- ..................................................
FD551874       <-- ..................................................
FD564341       <-- ..................................................
EX894202       <-- TGAATGACCAGCGTAAGCCCCACTCACCCACTTCTCAAGGGTCTCAAAAC
EY902831       --> ..................................................
FD945162       --> ..................................................
EX898556       --> ..................................................
EY925692       --> ..................................................
FD572913       --> ..................................................
FD547715       --> ..................................................
EW720767       --> ..................................................
EW738336       --> ..................................................
FD584295       --> ..................................................
EX894122       --> ..................................................
FD977087       --> ..................................................
FD983353       --> ..................................................

               1151   -   1201
UN21509        --> CAACCCAACGTCAACGGATCTTGGATAGAACAAGTAGATCACCAGACTGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD987274       <-- ..................................................
FD981311       <-- ..................................................
EW716681       <-- ..................................................
EW734406       <-- ..................................................
FD551874       <-- ..................................................
FD564341       <-- ..................................................
EX894202       <-- CAACCCAACGTCAACGGATCTTGGATAGAACAAGTAGATCACCAGACTGG
EY902831       --> ..................................................
FD945162       --> ..................................................
EX898556       --> ..................................................
EY925692       --> ..................................................
FD572913       --> ..................................................
FD547715       --> ..................................................
EW720767       --> ..................................................
EW738336       --> ..................................................
FD584295       --> ..................................................
EX894122       --> ..................................................
FD977087       --> ..................................................
FD983353       --> ..................................................

               1201   -   1251
UN21509        --> ATATCATCAGTGTTGACTTTAGTGACCAATGGTTCAGGACGAGCTTCGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD987274       <-- ..................................................
FD981311       <-- ..................................................
EW716681       <-- ..................................................
EW734406       <-- ..................................................
FD551874       <-- ..................................................
FD564341       <-- ..................................................
EX894202       <-- ATATCATCAGTGTTGACTTTAGTGACCAATGGTTCAGGACGAGCTTCGAA
EY902831       --> ..................................................
FD945162       --> ..................................................
EX898556       --> ..................................................
EY925692       --> ..................................................
FD572913       --> ..................................................
FD547715       --> ..................................................
EW720767       --> ..................................................
EW738336       --> ..................................................
FD584295       --> ..................................................
EX894122       --> ..................................................
FD977087       --> ..................................................
FD983353       --> ..................................................

               1251   -   1301
UN21509        --> CTTAGCTCCCATATGCTTCGCAAGAAACGCGAGATTAGAGCTCTCTCCCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD987274       <-- ..................................................
FD981311       <-- ..................................................
EW716681       <-- ..................................................
EW734406       <-- ..................................................
FD551874       <-- ..................................................
FD564341       <-- ..................................................
EX894202       <-- CTTAGCTCCCATATGCTTCGCAAGAAACGCGAGATTAGAGCTCTCTCCCC
EY902831       --> ..................................................
FD945162       --> ..................................................
EX898556       --> ..................................................
EY925692       --> ..................................................
FD572913       --> ..................................................
FD547715       --> ..................................................
EW720767       --> ..................................................
EW738336       --> ..................................................
FD584295       --> ..................................................
EX894122       --> ..................................................
FD977087       --> ..................................................
FD983353       --> ..................................................

               1301   -   1351
UN21509        --> AACCAGTATTGGTAAAGAGAGGAAACACATCACACAGTGCTTGTAGTGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD987274       <-- ..................................................
FD981311       <-- ..................................................
EW716681       <-- ..................................................
EW734406       <-- ..................................................
FD551874       <-- ..................................................
FD564341       <-- ..................................................
EX894202       <-- AACCAGTATTGGTAAAGAGAGGAAACACATCACACAGTGCTTGTAGTGTT
EY902831       --> ..................................................
FD945162       --> ..................................................
EX898556       --> ..................................................
EY925692       --> ..................................................
FD572913       --> ..................................................
FD547715       --> ..................................................
EW720767       --> ..................................................
EW738336       --> ..................................................
FD584295       --> ..................................................
EX894122       --> ..................................................
FD977087       --> ..................................................
FD983353       --> ..................................................

               1351   -   1401
UN21509        --> CCTAACATCCCTGCGTGCATAAGGAACATTGAAACTCCCTTCTTCTTAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD987274       <-- ..................................................
FD981311       <-- ..................................................
EW716681       <-- ..................................................
EW734406       <-- ..................................................
FD551874       <-- ..................................................
FD564341       <-- ..................................................
EX894202       <-- CCTAACATCCCTGCGTGCATAAGGAACATTGAAACTCCCTTCTTCTTAAC
EY902831       --> ..................................................
FD945162       --> ..................................................
EX898556       --> ..................................................
EY925692       --> ..................................................
FD572913       --> ..................................................
FD547715       --> ..................................................
EW720767       --> ..................................................
EW738336       --> ..................................................
FD584295       --> ..................................................
EX894122       --> ..................................................
FD977087       --> ..................................................
FD983353       --> ..................................................

               1401   -   1451
UN21509        --> GTATTCATACTCCGCTTGTCCATCCCATTCAAGGAACTAGAATTAGGACG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD987274       <-- ..................................................
FD981311       <-- ..................................................
EW716681       <-- ..................................................
EW734406       <-- ..................................................
FD551874       <-- ..................................................
FD564341       <-- ..................................................
EX894202       <-- GTATTCATACTCCGCTTGTCCATCCCATTCAAGGAACTAGAATTAGGACG
EY902831       --> ..................................................
FD945162       --> ..................................................
EX898556       --> ..................................................
EY925692       --> ..................................................
FD572913       --> ..................................................
FD547715       --> ..................................................
EW720767       --> ..................................................
EW738336       --> ..................................................
FD584295       --> ..................................................
EX894122       --> ..................................................
FD977087       --> ..................................................
FD983353       --> ..................................................

               1451   -   1501
UN21509        --> GCGGTGGCGAACAGAGAGGAGAGCGTGAAAGACGATGAGGAAGATGGAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD987274       <-- ..................................................
FD981311       <-- ..................................................
EW716681       <-- ..................................................
EW734406       <-- ..................................................
FD551874       <-- ..................................................
FD564341       <-- ..................................................
EX894202       <-- GCGGTGGCGAACAGAGAGGAGAGCGTGAAAGACGATGAGGAAGATGGAGA
EY902831       --> ..................................................
FD945162       --> ..................................................
EX898556       --> ..................................................
EY925692       --> ..................................................
FD572913       --> ..................................................
FD547715       --> ..................................................
EW720767       --> ..................................................
EW738336       --> ..................................................
FD584295       --> ..................................................
EX894122       --> ..................................................
FD977087       --> ..................................................
FD983353       --> ..................................................

               1501   -   1551
UN21509        --> CGCCATGTCCGTTTTGCGTTCGGAGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~
FD987274       <-- ..........................
FD981311       <-- ..........................
EW716681       <-- ..........................
EW734406       <-- ..........................
FD551874       <-- ..........................
FD564341       <-- ..........................
EX894202       <-- CGCCATGTCCGTTTTGCGTTCGGAGT
EY902831       --> ..........................
FD945162       --> ..........................
EX898556       --> ..........................
EY925692       --> ..........................
FD572913       --> ..........................
FD547715       --> ..........................
EW720767       --> ..........................
EW738336       --> ..........................
FD584295       --> ..........................
EX894122       --> ..........................
FD977087       --> ..........................
FD983353       --> ..........................