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Alignment for radish unigene UN21517

               0      -     50
UN21517        --> .ATAAAAAAAGCTTGTTCATAATTGTTTTCATGAATCATGACCATTAACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD940050       <-- ..................................................
EY921227       <-- ..................................................
EY915910       <-- ..................................................
FY448086       <-- ..................................................
FY450545       <-- ..................................................
FD549163       <-- ..................................................
FD947011       <-- ..................................................
EW734039       <-- ..................................................
EY917418       --> gATAAAAAAAGCTTGTTCATAATTGTTTTCATGAATCATGACCATTAACA
EY927054       --> .................CATAATTGTTTTCATGAATCATGACCATTAACA
FD936018       --> .............................CATGAATCATGACCATTAACA
FD539267       --> ..................................................

               50     -    100
UN21517        --> ATTTCATGTTTGTTTGACTTTATTCCAAAGAAAAAGAAAAAATCAAAGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD940050       <-- ..................................................
EY921227       <-- ..................................................
EY915910       <-- ..................................................
FY448086       <-- ..................................................
FY450545       <-- ..................................................
FD549163       <-- ..................................................
FD947011       <-- ..................................................
EW734039       <-- ..................................................
EY917418       --> ATTTCATGTTTGTTTGACTTTATTCCAAAGAAAAAGAAAAAATCAAAGTT
EY927054       --> ATTTCATGTTTGTTTGACTTTATTCCAAAGAAAAAGAAAAAATCAAAGTT
FD936018       --> ATTTCATGTTTGTTTGACTTTATTCCAAAGAAAAAGAAAAAATCAAAGTT
FD539267       --> ....ccTGTTTGTTTGACTTTATTCCAAAGAAAAA--AAAAATCAAAGTT

               100    -    150
UN21517        --> CTATAGACACAGTCCTCTTTTACTCAAGGCAGAAATTTCAAAGCAAGCTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD940050       <-- ..................................................
EY921227       <-- ..................................................
EY915910       <-- ..................................................
FY448086       <-- ..................................................
FY450545       <-- ..................................................
FD549163       <-- ..................................................
FD947011       <-- ..................................................
EW734039       <-- ..................................................
EY917418       --> CTATAGACACAGTCCTCTTTTACTCAAGGCAGAAATTTCAAAGCAAGCTA
EY927054       --> CTATAGACACAGTCCTCTTTTACTCAAGGCAGAAATTTCAAAGCAAGCTA
FD936018       --> CTATAGACACAGTCCTCTTTTACTCAAGGCAGAGATTTCAAAGCAAGCTA
FD539267       --> CTATAGACACAGTCCTCTTTTACTCAAGGCAGA--TTTCAAAGCAAGCTA

               150    -    200
UN21517        --> TGTTCCTCAAGTTAAAGAAAAAACATCATCCGTGTTTGGAGCTAGTAATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD940050       <-- ..................................................
EY921227       <-- ..................................................
EY915910       <-- ..................................................
FY448086       <-- ..................................................
FY450545       <-- ..................................................
FD549163       <-- ..................................................
FD947011       <-- ..................................................
EW734039       <-- ..................................................
EY917418       --> TGTTCCTCAAGTTAAAGAAAAAACATCATCCGTGTTTGGAGCTAGTAATC
EY927054       --> TGTTCCTCAAGTTAAAGAAAAAACATCATCCGTGTTTGGAGCTAGTAATC
FD936018       --> TGTTCCTCAAGTTAAAGAAAAAACATCATCCGTGTTTGGAGCTAGTAATC
FD539267       --> TGTTCCTCAAGTTAAAGAAAAAACATCATCCGTGTTTGGAGCTAGTAATC

               200    -    250
UN21517        --> TTGTTGCTAGCCTTTCCCTCGGAAACTTTTCATGTAGAAGAATCCTCCCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD940050       <-- ..................................................
EY921227       <-- ..................................................
EY915910       <-- ..................................................
FY448086       <-- ..................................................
FY450545       <-- ..................................................
FD549163       <-- ..................................................
FD947011       <-- ..................................................
EW734039       <-- ..................................................
EY917418       --> TTGTTGCTAGCCTTTCCCTCGGAAACTTTTCATGTAGAAGAATCCTCCCC
EY927054       --> TTGTTGCTAGCCTTTCCCTCGGAAACTTTTCATGTAGAAGAATCCTCCCC
FD936018       --> TTGTTGCTAGCCTTTCCCTCGGAAACTTTTCATGTAGAAGAATCCTCCCC
FD539267       --> TTGTTGCTAGCCTTTCCCTCGGATACTTTTCATGTAAAAAAATCCTCCCC

               250    -    300
UN21517        --> TTCCATGGGCAAGTCTGGTTGTGTTGCCCATTCAGTCCACGAGCCATCGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD940050       <-- ..................................................
EY921227       <-- ..................................................
EY915910       <-- ..................................................
FY448086       <-- ..................................................
FY450545       <-- ..................................................
FD549163       <-- ..................................................
FD947011       <-- ..................................................
EW734039       <-- ..................................................
EY917418       --> TTCCATGGGCAAGTCTGGTTGTGTTGCCCATTCAGTCCACGAGCCATCGT
EY927054       --> TTCCATGGGCAAGTCTGGTTGTGTTGCCCATTCAGTCCACGAGCCATCGT
FD936018       --> TTCCATGGGCAAGTCTGGTTGTGTTGCCCATTCAGTCCACGAGCCATCGT
FD539267       --> TTCCATGGGCAAGTCTGGTTGTGTTGCCCATTCAGTCCACGATCCATCGT

               300    -    350
UN21517        --> AAACTGGCACATCAGTTTTCCCCACTCGGTGAAGCCCCATTGCAAGGATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD940050       <-- ..................................................
EY921227       <-- ..................................................
EY915910       <-- ..................................................
FY448086       <-- ..................................................
FY450545       <-- ..................................................
FD549163       <-- ..................................................
FD947011       <-- ..................................................
EW734039       <-- ..................................................
EY917418       --> AAACTGGCACATCAGTTTTCCCCACTCGGTGAAGCCCCATTGCAAGGATG
EY927054       --> AAACTGGCACATCAGTTTTCCCCACTCGGTGAAGCCCCATTGCAAGGATG
FD936018       --> AAACTGGCACATCAGTTTTCCCCACTCGGTGAAGCCCCATTGCAAGGATG
FD539267       --> AAACTGGCACATCATTTTTCCCCACTCGGTGAAGCCCCATTGCAAGGATG

               350    -    400
UN21517        --> CAAGCTGTTACCCCAGTGCCACACGAAGCCATAATAGGCTTGTCCAATGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD940050       <-- ..................................................
EY921227       <-- ..................................................
EY915910       <-- ..................................................
FY448086       <-- ..................................................
FY450545       <-- ..................................................
FD549163       <-- ..................................................
FD947011       <-- ..................................................
EW734039       <-- ..................................................
EY917418       --> CAAGCTGTTACCCCAGTGCCACACGAAGCCATAATAGGCTTGTCCAATGA
EY927054       --> CAAGCTGTTACCCCAGTGCCACACGAAGCCATAATAGGCTTGTCCAATGA
FD936018       --> CAAGCTGTTACCCCAGTGCCACACGAAGCCATAATAGGCTTGTCCAATGA
FD539267       --> CAAGCTGTAACCCCAGTGCCACACGAAGCAATAATAGGCTTGTCCAGTGA

               400    -    450
UN21517        --> GATCTCTTCTTGTTCAAATCGTTTCTTCAGGTCTTCTGCTGGCAACATTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD940050       <-- ..............................GTCTTCTGCTGGCGACATTG
EY921227       <-- ..................................................
EY915910       <-- ..................................................
FY448086       <-- ..................................................
FY450545       <-- ..................................................
FD549163       <-- ..................................................
FD947011       <-- ..................................................
EW734039       <-- ..................................................
EY917418       --> GATCTCTTCTTGTTCAAATCGTTTCTTCAGGTCTTCTGCTGGCAACATTG
EY927054       --> GATCTCTTCTTGTTCAAATCGTTTCTTCAGGTCTTCTGCTGGCAACATTG
FD936018       --> GATCTCTTCTTGTTCAAATCGTTTCTTCAGGTCTTCTGCTGGCGACATTG
FD539267       --> GATCTCTTCTTGTTCAAATCGTTTCTTCAGGTCTTCTGCTGGTAACATTG

               450    -    500
UN21517        --> TTTGAGAAGCAGAATCAAACAACTGAGGATAAGGGACACACTTGCTTCCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD940050       <-- TTTGAGAAGCAGAATCAAACAACTGAGGATAAGGGACACACTTGCTTCCA
EY921227       <-- ..................................................
EY915910       <-- ..................................................
FY448086       <-- ..................................................
FY450545       <-- ..................................................
FD549163       <-- ..................................................
FD947011       <-- ..................................................
EW734039       <-- ..................................................
EY917418       --> TTTGAGAAGCAGAATCAAACAACTGAGGATAAGGGACACACTTGCTTCCA
EY927054       --> TTTGAGAAGCAGAATCAAACAACTGAGGATAAGGGACACACTTGCTTCCA
FD936018       --> TTTGAGA...........................................
FD539267       --> TTTGAAAAGCAAAATCAAACAATTGAGGATAAGGGACACACTTGCTTCCA

               500    -    550
UN21517        --> GGGATATGACCACTTCTTATTCCCTTACGGGGTTCTGGAGCTGTACCATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD940050       <-- GGGATATGACCACTTCTTATTCCCTTACGGGGTTCTGGAGCTGTACCATC
EY921227       <-- ..................................................
EY915910       <-- ..................................................
FY448086       <-- ..................................................
FY450545       <-- ..................................................
FD549163       <-- ..................................................
FD947011       <-- ..................................................
EW734039       <-- ..................................................
EY917418       --> GGGATATGACCACTTCTTATTCCCTTACGGGGTTCTGGAGCTGTACCATC
EY927054       --> GGGATATGACCCCTTCTTATTCCCTTACGGGGTTCTGGAGCTGTACCATC
FD936018       --> ..................................................
FD539267       --> GGGATATGACCACTTCTTATTCCCTTACGTGGTTCTGGAGCTGTACCATC

               550    -    600
UN21517        --> AAACCTGGCTTTGGAACGTGCGTCTACGTGTTGATATGTTTGATCCTCCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD940050       <-- AAACCTGGCTTTGGAACGTGCGTCTACGTGTTGATATGTTTGATCCTCCA
EY921227       <-- ..................................................
EY915910       <-- ..................................................
FY448086       <-- ..................................................
FY450545       <-- ..................................................
FD549163       <-- ..................................................
FD947011       <-- ..................................................
EW734039       <-- ..................................................
EY917418       --> AAACCTGGCTTTGGAACGTGCGTCTACGTGTTGATATGTTTGATCCTCCA
EY927054       --> AAACCTGGCTTTGGAACGTGCGTC..........................
FD936018       --> ..................................................
FD539267       --> AAACCTGGCTTTGGAACGTGCGTCTACGTGTTGATATGTTTGATCCTCCA

               600    -    650
UN21517        --> AATTGTTCTTAACCTGATCAAGTGTCCACACTAGATGCGGCTGGAACTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD940050       <-- AATTGTTCTTAACCTGATCAAGTGTCCACACTAGATGCGGCTGGAACTTG
EY921227       <-- ..........taaCTGATCAAGTGTCCACACTAGATGCGGCTGGAACTTG
EY915910       <-- ...............GATCAAGTGTCCACACTAGATGCGGCTGGAACTTG
FY448086       <-- .................TCAAGTGTCCACACTAGATGCGGCTGGAACTTG
FY450545       <-- ...............................TAGATGCGGCTGGAACTTG
FD549163       <-- ..................................................
FD947011       <-- ..................................................
EW734039       <-- ..................................................
EY917418       --> AATTGTTCTTAACCTGATCAAGTGTCCACACTAGATGCGGCTGGAACTTG
EY927054       --> ..................................................
FD936018       --> ..................................................
FD539267       --> AATTGTTCTTAACCTGATCAAGTGTCCACACTAGATGCGGCTGGAACTTG

               650    -    700
UN21517        --> GTCTGAAAGGTTATTGGACTCACGGTATGTCCTTGGTAGATTTTCTCTAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD940050       <-- GTCTGAAAGGTTATTGGACTCACGGTATGTCCTTGGTAGATTTTCTCTAT
EY921227       <-- -TCTGAAAGGTTATTGGACTCACGGTATGTCCTTGGTAAATTT-CTCTAT
EY915910       <-- -TCTGAAAGGTTATTGGGCTCACGGTATGTCCTTGGTAGATTTTCTCTAT
FY448086       <-- GTCTGAAAGGTTATTGGACTCACGGTATGTCCTTGGTAGATTTTCTCTAT
FY450545       <-- GTCTGAAAGGTTATTGGACTCACGGTATGTCCTTGGTAGATTTTCTCTAT
FD549163       <-- ..................................................
FD947011       <-- ..................................................
EW734039       <-- ..................................................
EY917418       --> GTCTGAAAGGTTATTGGACT..............................
EY927054       --> ..................................................
FD936018       --> ..................................................
FD539267       --> GTCTGAAAGGTTATTGGGCTCACGGTATGTCCTTGG..............

               700    -    750
UN21517        --> AGCCTCACTTGCAGCACTGGCTTTCAAAATAGCATCACCTGATGCACTAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD940050       <-- AGCCTCACTTGCAGCACTGGCTTTCAAAATAGCATCACCTGATGCACTAG
EY921227       <-- AGCCTCACTTGCAGCACTGGCTTTCAAAATAGCATCACGTGATGCACTAG
EY915910       <-- AGC-TCACTTGCAGCACTGGCTTTCAAAATAGCATCACGTGATGCACTAG
FY448086       <-- AGCCTCACTTGCAGCACTGGCTTTCAAAATAGCATCACCTGATGCACTAG
FY450545       <-- AGCCTCACTGCCAGCACTGGCTTTCAAAATAGCATCACCTGATGCACTAG
FD549163       <-- ..................................................
FD947011       <-- ..................................................
EW734039       <-- ..................................................
EY917418       --> ..................................................
EY927054       --> ..................................................
FD936018       --> ..................................................
FD539267       --> ..................................................

               750    -    800
UN21517        --> ATTCAACATCGTAACCTGAAGCACGCCATCTCGGTAGTCCTCCATCCAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD940050       <-- ATTCAATATCGTAACCTGAAGCACGCCATCTCGGTAGTCCTCCATCCAGC
EY921227       <-- ATTCAACATCGTAACGTGAAGCACGCCATCTCGGTAGTCCTCCATCCAGC
EY915910       <-- ATTCAACATCGTAAC-TGAAGCACGCCATCTCGGTAATCCTCCATCCAGC
FY448086       <-- ATTCAACATCGTAACCTGAAGCACGCCATCTCGGTAGTCCTCCATCCAGC
FY450545       <-- ATTCAACATCGTAACCTGAAGCACGCCATCTCGGTAGTCCTCCATCCAGC
FD549163       <-- ..................AAGCACGCCATCTCGGTAGACCTCCATCCAGC
FD947011       <-- ...................AGCACGCCATCTCGGTAGTCCTCCATCCAGC
EW734039       <-- ..................................................
EY917418       --> ..................................................
EY927054       --> ..................................................
FD936018       --> ..................................................
FD539267       --> ..................................................

               800    -    850
UN21517        --> ACCCACACTTTGTCATGTCCGAAAACTCGGAACATCCACCATACACGAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD940050       <-- ACCCACACTTTGTCATGTCCGAAAACTCGGAACATCCACCATACACGAGC
EY921227       <-- ACCCACACTTTGTCATGCCCAAAAACTCGGAACATCCACCATACACGAGC
EY915910       <-- ACCCACACTTTGTCATGTCCGAAAACTCGGAACATCCACCATACACGAGC
FY448086       <-- ACCCACACTTTGTCATGTCCGAAAACTCGGAACATCCACCATACACGAGC
FY450545       <-- ACCCACACTTTGTCATGTCCGAAAACTCGGAACATCCACCATACACGAGC
FD549163       <-- ACCCACACTTTGTCATGCCCAAAAACTCGGAACATCCACCATACGCGAGC
FD947011       <-- ACCCACACTTTGTCATGTCCGAAAACTCGGAACATCCACCATACACGAGC
EW734039       <-- ...................caAAAACTCGGAACATCCACCATACGCGAGC
EY917418       --> ..................................................
EY927054       --> ..................................................
FD936018       --> ..................................................
FD539267       --> ..................................................

               850    -    900
UN21517        --> TGCACTAAAGACCCCCTTTGCATCATAAACAACCACTCCGTCCTTGTTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD940050       <-- TGCACTAAAGACCCCCTTCGCATCATAAACAACCACTCCATCCTCGTTAT  Raphanus sativus var. oleiformis
EY921227       <-- TGCACTAAAGACACCCTTTGCATCATAAACAACCACTCCGTCCTTGTTCT  Raphanus raphanistrum subsp. landra
EY915910       <-- TGCACTAAAGACACCCTTTGCATCATAAACAACCACTCCGTCCTTGTTCT  Raphanus raphanistrum subsp. raphanistrum (NY)
FY448086       <-- TGCACTAAAGACCCCCTTCGCATCATAAACAACCACTCCATCCTCGTTCT  Raphanus sativus cv GSK3-1
FY450545       <-- TGCACTAAAGACCCCCTTCGCATCATAAACAACCACTCCATCCTCGTTCT  Raphanus sativus cv GSK3-1
FD549163       <-- TGCACTAAAGACACCCTTTGCATCATAAACAACCACTCCGTCCTTGTTCT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD947011       <-- TGCACTAAAGACCCCCTTCGCATCATAAACAACCACTCCATCCTCGTTCT  Raphanus sativus cv Early Scarlet Globe
EW734039       <-- TGCACTAAAGACACCCTTTGCATCATAAACAACCACTCCGTCCTTGTTCT  Raphanus sativus cv Rat-Tail Radish #3870
EY917418       --> ..................................................  Raphanus raphanistrum subsp. landra
EY927054       --> ..................................................  Raphanus sativus var. oleiformis
FD936018       --> ..................................................  Raphanus sativus var. oleiformis
FD539267       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)

               900    -    950
UN21517        --> CAATTCCAAGAGCAGAGCAACCAGCAGCAAAAGCTTCCTCAGAGGGCAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD940050       <-- CAATTCCAAGAGCAGAGCAACCAGCAGCAAAAGCTTCCTCAGAGGGCAAC  Raphanus sativus var. oleiformis
EY921227       <-- CAATTCCAAGAGCAGAGCAACCAGCAGCAAAAGCTTCCTCCGACGGCAAC  Raphanus raphanistrum subsp. landra
EY915910       <-- CAATTCCAAGAGCAGAGCAACCAGCAGCAAAAGCCTCTTCAGACGGCAAC  Raphanus raphanistrum subsp. raphanistrum (NY)
FY448086       <-- CAATTCCAAGAGCAGAGCAACCAGCAGCAAAAGCTTCCTCAGAGGGCAAC  Raphanus sativus cv GSK3-1
FY450545       <-- CAATTCCAAGAGCAGAGCAACCAGCAGCAAAAGCTTCCTCAGAGGGCAAC  Raphanus sativus cv GSK3-1
FD549163       <-- CAATTCCAAGAGCAGAGCAACCAGCAGCAAAAGCTTCCTCAGACGGTAAC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD947011       <-- CAATTCCAAGAGCAGAGCAACCAGCAGCAAAAGCTTCCTCAGAGGGCAAC  Raphanus sativus cv Early Scarlet Globe
EW734039       <-- CAATTCCAAGAGCAGAGCAACCAGCAGCAAAAGCTTCCTCAGACGGTAAC  Raphanus sativus cv Rat-Tail Radish #3870
EY917418       --> ..................................................  Raphanus raphanistrum subsp. landra
EY927054       --> ..................................................  Raphanus sativus var. oleiformis
FD936018       --> ..................................................  Raphanus sativus var. oleiformis
FD539267       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)

               950    -   1000
UN21517        --> ATATGTGGCAAACTTGTTGATCGATCTGATATTCCATCCAAATCAAAGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD940050       <-- ATATGTGGCAAACTTGTTGATCGATCTGATATTCCATCCAAATCAAAGAA
EY921227       <-- ATATGTGGCAAACTTGTTGATCGATCTGATATTCCATCCAAATCAAAGAA
EY915910       <-- ATATGTGGCAAACTTGTTGATCGATCTGATATTCCATCCAAATCAAAGAA
FY448086       <-- ATATGTGGCAAACTTGTTGATCGATCTGATATTCCATCCAAATCAAAGAA
FY450545       <-- ATATGTGGCAAACTTGTTGATCGATCTGATATTCCATCCAAATCAAAGAA
FD549163       <-- ATATGTGGCAAACTTGTTGATCGATCTGATATTCCATCCAAATCAAAGAA
FD947011       <-- ATATGTGGCAAACTTGTTGATCGATCTGATATTCCATCCAAATCAAAGAA
EW734039       <-- ATATGTGGCAAACTTGTTGATCGATCTGATATTCCATCCAAATCAAGGAA
EY917418       --> ..................................................
EY927054       --> ..................................................
FD936018       --> ..................................................
FD539267       --> ..................................................

               1000   -   1050
UN21517        --> GAGAGCACCGGGGATATGAGCAACCTGATATTCTTGGATGGGATTCCTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD940050       <-- GAGAGCACCGGGGATATGAGCAACCTGATATTCTTGGATGGGATTCCTCT
EY921227       <-- GAGAGCACCGGGGATATGAGCAACCTGATATTCTTGGATGGGATTCCTCT
EY915910       <-- GA-AGCACCGGGGATATGAGCAACCTGATATTCTTGGATGGGATTCCTCT
FY448086       <-- GAGAGCACCGGGGATATGAGCAACCTGATATTCTTGGATGGGATTCCTCT
FY450545       <-- GAGAGCACCGGGGATATGAGCAACCTGATATTCTTGGATGGGATTCCTCT
FD549163       <-- GAGAGCACCGGGGATATGAGCAACCTGATATTCTTGGATGGGATTCCTCT
FD947011       <-- GAGAGCACCGGGGATATGAGCAACCTGATATTCTTGGATGGGATTCCTCT
EW734039       <-- GAGAGCACCGGGGATATGAGCAACCTGATATTCTTGGATGGGATTCCTCT
EY917418       --> ..................................................
EY927054       --> ..................................................
FD936018       --> ..................................................
FD539267       --> ..................................................

               1050   -   1100
UN21517        --> GCTCATCAGGCATGTACCATGACGCATCCAATACCTTCAAATCAGGCTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD940050       <-- GCTCATCAc.........................................
EY921227       <-- GCTCATCTGGCATGTACCATGACGCATCCAATACCTTCAAATCAGGCTCT
EY915910       <-- GCTCATCAGGCATGTACCATGACGCATCCAATACCTTCAAATCAGGCTCT
FY448086       <-- GCTCATCAGGCATGTACCATGACGCATCCAATACCTTCAAATCAGGCTCT
FY450545       <-- GCTCATCAGGCATGTACCATGACGCATCCAATACCTTCAAATCAGGCTCT
FD549163       <-- GCTCATCAGGCATGTACCATGACGCATCCAATACCTT-AAATCAGGCTCT
FD947011       <-- GCTCATCAGGCATGTACCATGACGCACCCAATACCTTCAAATCAGGCTCT
EW734039       <-- GCTCATCAGGCATGTACCATGACGCATCCAATACCTTCAAATCAGGCTCT
EY917418       --> ..................................................
EY927054       --> ..................................................
FD936018       --> ..................................................
FD539267       --> ..................................................

               1100   -   1150
UN21517        --> CTAAGATTAGAATGGAGCCAATCAACAGAAACAACAGGCTCATTAGTTGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD940050       <-- ..................................................  Raphanus sativus var. oleiformis
EY921227       <-- CTAAGATTAGAATGGAGCCAATCAACAGAAACAACAGGCTCATTAGTTGG  Raphanus raphanistrum subsp. landra
EY915910       <-- CTGAGATTAGAATGGAGCCAATCAACAGAAACAACAGGCTCATTGGTCGG  Raphanus raphanistrum subsp. raphanistrum (NY)
FY448086       <-- CTAAGATTAGAATGAAGCCAATCAACAGAAACAACAGGCTCATTAGTTGG  Raphanus sativus cv GSK3-1
FY450545       <-- CTAAGATTAGAATGAAGCCAATCAACAGAAACAACAGGCTCATTAGTTGG  Raphanus sativus cv GSK3-1
FD549163       <-- CTGAGATTAGAATGGAGCCAATCAACAGAAACAACAGGCTCATTGGTCGG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD947011       <-- CTAAGATTAGAATGAAGCCAATCAACAGAAACAACAGGCTCATTAGTTGG  Raphanus sativus cv Early Scarlet Globe
EW734039       <-- CTGAGATTAGAATGGAGCCAATCAACAGAAACAACAGGCTCATTGGTCGG  Raphanus sativus cv Rat-Tail Radish #3870
EY917418       --> ..................................................  Raphanus raphanistrum subsp. landra
EY927054       --> ..................................................  Raphanus sativus var. oleiformis
FD936018       --> ..................................................  Raphanus sativus var. oleiformis
FD539267       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)

               1150   -   1200
UN21517        --> TACAGATGAAGTCGAGTAGCCTGCTCTTGCCCCAATCACAGTAGAAGCCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD940050       <-- ..................................................  Raphanus sativus var. oleiformis
EY921227       <-- TACAGATGAAGTCGAGTAGCCTGATCTTGCCCCAATCACAGTAGAAGCCA  Raphanus raphanistrum subsp. landra
EY915910       <-- CACAGATGAAGTCGAGTAGCCTGCTCTTGCCCCAATCACAGTAGAAGCCA  Raphanus raphanistrum subsp. raphanistrum (NY)
FY448086       <-- TACAGATGAAGTCGAGTAGCCTGCTCTTGCCCCAATCACAGTAGAAGCCA  Raphanus sativus cv GSK3-1
FY450545       <-- TACAGATGAAGTCGAGTAGCCTGCTCTTGCCCCAATCACAGTAGAAGCCA  Raphanus sativus cv GSK3-1
FD549163       <-- CACAGATGAAGTCGAGTAGCCTGCTCTTGCCCCAATCACAGTAGAAGCCA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD947011       <-- TACAGATGAAGTCGAGTAGCCTGCTCTTGCCCCAATCACAGTAGAAGCCA  Raphanus sativus cv Early Scarlet Globe
EW734039       <-- CACAGATGAAGTCGAGTAGCCTGCTCTTGCCCCAATCACAATAGAAGCCA  Raphanus sativus cv Rat-Tail Radish #3870
EY917418       --> ..................................................  Raphanus raphanistrum subsp. landra
EY927054       --> ..................................................  Raphanus sativus var. oleiformis
FD936018       --> ..................................................  Raphanus sativus var. oleiformis
FD539267       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)

               1200   -   1250
UN21517        --> TAGCTCGAGCTGATCTATAAGCTGTAGAGGAAAAGCCTAACTGAGAGTAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD940050       <-- ..................................................
EY921227       <-- TAGCTCGAGCTGATCTATAAGCTGTAGAGGAAAAGCCTAACTGAGAGTAG
EY915910       <-- TAGCTCGAGCTGATCTATAAGCTGTAGAGGAAAAGCCTAACTGAGAGTAG
FY448086       <-- TAGCTCGAGCTGATCTATAAGCTGTAGAGGAAAAGCCTAACTGAGAGTAG
FY450545       <-- TAGCTCGAGCTGATCTATAAGCTGTAGAGGAAAAGCCTAACTGAGAGTAG
FD549163       <-- TAGCTCGAGCTGATCTATAAGCTGTAGAGGAAAAGCCTAACTGAGAGTAG
FD947011       <-- TAGCTCGAGCTGATCTATAAGCTGTAGAGGAAAAGCCTAACTGAGAGTAG
EW734039       <-- TAGCTCGAGCTGATCTATAAGCTGTAGAGGAAAAGCCTAACTGAGAGTAG
EY917418       --> ..................................................
EY927054       --> ..................................................
FD936018       --> ..................................................
FD539267       --> ..................................................

               1250   -   1300
UN21517        --> AACCCTCTCCTAGTGAGAAAGGAGGGGAGATTAAGGGTGGTCTTTTGGGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD940050       <-- ..................................................
EY921227       <-- AACCCTCTCCTAGTGAGAAAGGAGGGGAGATTAAGGGTGGTCTTTTGGGG
EY915910       <-- AACCCTCTCCTAGTGAGAAAGGAGGGGAGATTAAGGGTGGTCTTTTGGGG
FY448086       <-- AACTCTCTCCTAGTGAGAAAGGAGGGGAGATTAAGGGTGGTCTTTTGGGG
FY450545       <-- AACTCTCTCCTAGTGAGAAAGGAGGGGAGATTAAGGGTGGTCTTTTGGGG
FD549163       <-- AACCCTCCCCTAGTGAGAAAGGAGGGAAGATTAAGGGTGGTCTTTTGGGG
FD947011       <-- AACCCTCTCCTAGTGAGAAAGGAGGGGAGATTAAGGGTGGTCTTTTGGGG
EW734039       <-- AACCCTCTCCTAGTGAGAAAGGAGGGGAGATTAAGGGTGGTCTTTTGGGG
EY917418       --> ..................................................
EY927054       --> ..................................................
FD936018       --> ..................................................
FD539267       --> ..................................................

               1300   -   1350
UN21517        --> GAGAAGAGAAGGAGTGATCAAGCGGTGGCTTGCAGACAGAAAGGTTCTGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD940050       <-- ..................................................
EY921227       <-- GAGAAGAGAAGGAGTGATCAAGCGGTGGCTTGCAGACAGAAAGGTTCTGG
EY915910       <-- GAGAAGAGAAGGAGTGATCAAGCGGTGGCTTGCAGACAGAAAGGTTCTGG
FY448086       <-- GAGAAGAGAAGGAGTGATCAAGCGGTGGCTTGCAGACAGAAAGGTTCTGG
FY450545       <-- GAGAAGAGAAGGAGTGATCAAGCGGTGGCTTGCAGACAGAAAGGTTCTGG
FD549163       <-- GAGAAGAGAAGGAGTGATCAAGCGGTGGCTTGCAGACAGAAAGGTTCTGG
FD947011       <-- GAGAAGAGAAGGAGTGATCAAGCGGTGGCTTGCAGACAGAAAGGTTCTGG
EW734039       <-- GAGAAGAGAAGGAGTGATCAAG-GGTGGCTTGCAGACAGAAAGGTTCTGG
EY917418       --> ..................................................
EY927054       --> ..................................................
FD936018       --> ..................................................
FD539267       --> ..................................................

               1350   -   1400
UN21517        --> AGAACAGAGTCGAAGCCATGTCACACAATGCGACTAAGTGTAAAGATGGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD940050       <-- ..................................................
EY921227       <-- AGAACAGTGTCGAAGCCATGTCACACAATGCGACTcc.............
EY915910       <-- AGAACAGAGTCGAAGCCATGTCCCACcc......................
FY448086       <-- AGAACAGAGTCGAAGCCATGTCAC..........................
FY450545       <-- AGAACAGAGTCGAAGCCATGTCACACAATGCGACTAAGTGTAAAGA....
FD549163       <-- AGAACAGAGTCGAAGCCATGTCACACAATGCGACTAAGTGTAAAGATGGT
FD947011       <-- AGAACAGAGTCGAAGCCATGTCACACAATGCcc.................
EW734039       <-- AGAACAGAGTCGAAGCCATGTCACACcc......................
EY917418       --> ..................................................
EY927054       --> ..................................................
FD936018       --> ..................................................
FD539267       --> ..................................................

               1400   -   1450
UN21517        --> TTTTGATTTCC
                   ~~~~~~~~~~~
FD940050       <-- ...........
EY921227       <-- ...........
EY915910       <-- ...........
FY448086       <-- ...........
FY450545       <-- ...........
FD549163       <-- TTTTGATTTCC
FD947011       <-- ...........
EW734039       <-- ...........
EY917418       --> ...........
EY927054       --> ...........
FD936018       --> ...........
FD539267       --> ...........