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Alignment for radish unigene UN21520

               1      -     51
UN21520        --> CACCCAATTTGCTGTCGTTGTTATTTTATTGATTAGGTTTACTCATAGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV528754       <-- CACCCAATTTGCTGTCGTTGTTATTTTATTGATTAGGTTTACTCATAGGA
FD973979       <-- ..................................................
FD957585       <-- ..................................................
FD548739       <-- ..................................................
FD971608       <-- ..................................................
EY914421       <-- ..................................................
EX888280       <-- ..................................................
EV539402       <-- ..................................................
EX754109       <-- ..................................................
FD551870       <-- ..................................................
FD938239       <-- ..................................................
FD958179       <-- ..................................................
EX754433       <-- ..................................................
EY900927       <-- ..................................................
FD962581       <-- ..................................................
FD974163       <-- ..................................................
EY910467       --> ..................................................
FD547710       --> ..................................................
FD934663       --> ..................................................
FD953147       --> ..................................................
FD953720       --> ..................................................
EX758763       --> ..................................................
EY896356       --> ..................................................
FD959098       --> ..................................................
FD547203       --> ..................................................

               51     -    101
UN21520        --> ATATGACCACCCAATTTGCTGAAGATTTATAATTTCACTTCAAGATTATT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV528754       <-- ATATGACCACCCAATTTGCTGAAGATTTATAATTTCACTTCAAGATTATT
FD973979       <-- ...................TGAAGATTTATAATTTCACTTCAAGATTATT
FD957585       <-- ....................GAAGATTTATAATTTCACTTCAAGATTATT
FD548739       <-- .....................AAGATTTATAATTTCACTTCAAGATTATT
FD971608       <-- ...........................gATAATTTCACTTCAAGATTATT
EY914421       <-- ..............................AATTTCACTTCAAGATTATT
EX888280       <-- ..............................ttTTTCACTTCAAGATTATT
EV539402       <-- ...................................CACTTCAAGATTATT
EX754109       <-- ...................................CACTTCAAGATTATT
FD551870       <-- ...................................CACTTCAAGATTATT
FD938239       <-- ..................................cCACTTCAAGATTATT
FD958179       <-- ...................................gACTTCAAGATTATT
EX754433       <-- ....................................cCTTCAAGATTATT
EY900927       <-- ....................................cCTTCAAGATTATT
FD962581       <-- ..................................................
FD974163       <-- ..................................................
EY910467       --> ..............................AATTTCACTTCAAGATTATT
FD547710       --> ...................................CACTTCAAGATTATT
FD934663       --> ..................................cCACTTCAAGATTATT
FD953147       --> ....................................ACTTCAAGATTATT
FD953720       --> ...................................gACTTCAAGATTATT
EX758763       --> ....................................cCTTCAAGATTATT
EY896356       --> ....................................cCTTCAAGATTATT
FD959098       --> ...................................cgCTTCAAGATTATT
FD547203       --> ..................................................

               101    -    151
UN21520        --> CAGTTTCTATTTTTT-ATTCGAAACCCATTGGTTTTACAGCAACTGGCAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV528754       <-- CAGTTTCTATTTTTT-ATTCGAAACCCATTGGTTTTACAGCAACTGGCAG
FD973979       <-- CAGTTTCTATTTTTT-ATTCGAAACCCATTGGTTTTACAGCAACTGGCAG
FD957585       <-- CAGTTTCTATTTTTT-ATTCGAAACCCATTGGTTTTACAGCAACTGGCAG
FD548739       <-- CAGTTTCTATTTTTT-ATTCGAAACACATTGGTTTTACAGCAACTGGCAG
FD971608       <-- CAGTTTCTATTTTTT-ATTCGAAACCCATTGGTTTTACAGCAACTGGCAG
EY914421       <-- CAGTTTCTATTTTTTTATTCGAAACCCATTGGTTTTACAGCAACTGGCAG
EX888280       <-- CAGTTTCTATTTTTT-ATTCGAAACCCATTGGTTTTACAGCAACTGGCAG
EV539402       <-- CAGTTTCTATTTTTT-ATTCGAAACCCATTGGTTTTACAGCAACTGGCAG
EX754109       <-- CAGTTTCTATTTTTT-ATTCGAAACCCATTGGTTTTACAGCAACTGGCAG
FD551870       <-- CAGTTTCTATTTTTT-ATTCGAAACACATTGGTTTTACAGCAACTGGCAG
FD938239       <-- CAGTTTCTATTTTTT-ATTCGAAACCCATTGGTTTTACAGCAACTGGCAG
FD958179       <-- CAGTTTCTATTTTTT-ATTCGAAACCCATTGGTTTTACAGCAACTGGCAG
EX754433       <-- CAGTTTCTATTTTTT-ATTCGAAACCCATTGGTTTTACAGCAACTGGCAG
EY900927       <-- CAGTTTCTATTTTTT-ATTCGAAACCCATTGGTTTTACAGCAACTGGCAG
FD962581       <-- .........TTTTTT-ATTCGAAACCCATTGGTTTTACAGCAACTGGCAG
FD974163       <-- .........TTTTTT-ATTCGAAACCCATTGGTTTTACAGCAACTGGCAG
EY910467       --> CAGTTTCTATTTTTTTATTCGAAACCCATTGGTTTTACAGCAACTGGCAG
FD547710       --> CAGTTTCTATTTTTT-ATTCGAAACACATTGGTTTTACAGCAACTGGCAA
FD934663       --> CAGTTTCTATTTTTT-ATTCGAAACCCATTGGTTTTACAGCAACTGGCAA
FD953147       --> CAGTTTCTATTTTTT-ATTCGAAACCCATTGGTTTTACAGCAACTGGCAG
FD953720       --> CAGTTTCTATTTTTT-ATTCGAAACCCATTGGTTTTACAGCAACTGGCAG
EX758763       --> CAGTTTCTATTTTTT-ATTCGAAACCCATTGGTTTTACAGCAACTGGCAA
EY896356       --> CAGTTTCTATTTTTT-ATTCGAAACCCATTGGTTTTACAGCAACTGGCAG
FD959098       --> CAGTTTCTATTTTTT-ATTCGAAACCCATTGGTTTTACAGCAACTGGCAG
FD547203       --> ...................CGAAACACATTGGTTTTACAGCAACTGGCAG

               151    -    201
UN21520        --> AACGAAACAAGAAAACTTCGAGTTTTTATTCATTAAATACTATATTGTCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV528754       <-- AACGAAACAAGAAAACTTCGAGTTTTTATTCATTAAATACTATATTGTCG  Raphanus raphanistrum subsp. maritimus
FD973979       <-- AACGAAACAAGAAAACTTCGAGTTTTTATTCATTAAATACTATATTGTTG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD957585       <-- AACGAAACAAGAAAACTTCGAGTTTTTATTCATTAAATACTATATTGTCG  Raphanus sativus cv Rat-Tail Radish #3870
FD548739       <-- AACGAAACAAGAAAACTTCGAGTTTTTATTCATTAAATACTATATTGTCG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD971608       <-- AACGAAACGAGAAAACTTCGAGTTTTTATTCATTAAATACTATATTGTTG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY914421       <-- AACGAAACAAGAAAACTTCGAGTTTTTATTCATTAAATACTATATTGTCG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX888280       <-- AACGAAACAAGAAAACTTCGAGTTTTTATTCATTAAATACTATATTGTCG  Raphanus sativus var. oleiformis
EV539402       <-- AACGAAACAAGAAAACTTCGAGTTTTTATTCATTAAATACTATATTGTTG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX754109       <-- AACGAAACGAGAAAACTTCGAGTTTTTATTCATTAAATACTATATTGTTG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD551870       <-- AACGAAACAAGAAAACTTCGAGTTTTTATTCATTAAATACTATATTGTCG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD938239       <-- AACGAAACAAGAAAACTTCGAGTTTTTATTCATTAAATACTATATTGTCG  Raphanus sativus var. oleiformis
FD958179       <-- AACGAAACAAGAAAACTTCGAGTTTTTATTCATTAAATACTATATTGTCG  Raphanus sativus cv Rat-Tail Radish #3870
EX754433       <-- AACGAAACAAGAAAACTTCGAGTTTTTATTCATTAAATACTATATTGTTG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY900927       <-- AACGAAACAAGAAAACTTCGAGTTTTTATTCATTAAATACTATATTGTCG  Raphanus raphanistrum subsp. maritimus
FD962581       <-- AACGAAACAAGAAAACTTCGAGTTTTTATTCATTAAATACTATATTGTCG  Raphanus raphanistrum subsp. maritimus
FD974163       <-- AACGAAACGAGAAAACTTCGAGTTTTTATTCATTAAATACTATATTGTTG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY910467       --> AACGAAACAAGAAAACTTCGAGTTTTTATTCATTAAATACTATATTGTCG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD547710       --> AACGAAACAAGAAAACTTCGAGTTTTTATTCATTAAATACTATATTGTCG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD934663       --> AACGAAACAAGAAAACTTCGAGTTTTTATTCATTAAATACTATATTGTCG  Raphanus sativus var. oleiformis
FD953147       --> AACGAAACAAGAAAACTTCGAGTTTTTATTCATTAAATACTATATTGTCG  Raphanus sativus cv Rat-Tail Radish #3870
FD953720       --> AACGAAACAAGAAAACTTCGAGTTTTTATTCATTAAATACTATATTGTCG  Raphanus sativus cv Rat-Tail Radish #3870
EX758763       --> AACGAAACAAGAAAACTTCGAGTTTTTATTCATTAAATACTATATTGTTG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY896356       --> AACGAAACAAGAAAACTTCGAGTTTTTATTCATTAAATACTATATTGTCG  Raphanus raphanistrum subsp. maritimus
FD959098       --> AACGAAACAAGAAAACTTCGAGTTTTTATTCATTAAATACTATATTGTCG  Raphanus raphanistrum subsp. maritimus
FD547203       --> AACGAAACAAGAAAACTTCGAGTTTTTATTCATTAAATACTATATTGTCG  Raphanus raphanistrum subsp. raphanistrum (NY)

               201    -    251
UN21520        --> TTGATCTCCCTCCCTGCTTCTCATAGATATAACAACGTCCATATCATCAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV528754       <-- TTGATCTCCCTCCCTGCTTCTCATAGATATAACAACGTCCATATCATCAG
FD973979       <-- TTGATCTCCCTCCCTGCTTCTCATAGATATAACAACGTCCATATCATCAG
FD957585       <-- TTGATCTCCCTCCCTGCTTCTCATAGATATAACAACGTCCATATCATCAG
FD548739       <-- TTGATCTCCCTCCCTGCTTCTCATAGATATAACAACGTCCATATCATCAG
FD971608       <-- TTGATCTCCCTCCCTGCTTCTCATAGATATAACAACGTCCATATCATCAG
EY914421       <-- TTGATCTCCCTCCCTGCTTCTCATAGATATAACAACGTCCATATCATCAG
EX888280       <-- TTGATCTCCCTCCCTGCTTCTCATAGATATAACAACGTCCATATCATCAG
EV539402       <-- TTGATCTCCCTCCCTGCTTCTCATAGATATAACAACGTCCATATCATCAG
EX754109       <-- TTGATCTCCCTCCCTGCTTCTCATAGATATAACAACGTCCATATCATCAG
FD551870       <-- TTGATCTCCCTCCCTGCTTCTCATAGATATAACAACGTCCATATCATCAG
FD938239       <-- TTGATCTCCCTCCCTGCTTCTCATAGATATAACAACGTCCATATCATCAG
FD958179       <-- TTGATCTCCCTCCCTGCTTCTCATAGATATAACAACGTCCATATCATCAG
EX754433       <-- TTGATCTCCCTCCCTGCTTCTCATAGATATAACAACGTCCATATCATCAG
EY900927       <-- TTGATCTCCCTCCCTGCTTCTCATAGATATAACAACGTCCATATCATCAG
FD962581       <-- TTGATCTCCCTCCCTGCTTCTCATAGATATAACAACGTCCATATCATCAG
FD974163       <-- TTGATCTCCCTCCCTGCTTCTCATAGATATAACAACGTCCATATCATCAG
EY910467       --> TTGATCTCCCTCCCTGCTTCTCATAGATATAACAACGTCCATATCATCAG
FD547710       --> TTGATCTCCCTCCCTGCTTCTCATAGATATAACAACGTCCATATCATCAG
FD934663       --> TTGATCTCCCTCCCTGCTTCTCATAGATATAACAACGTCCATATCATCAG
FD953147       --> TTGATCTCCCTCCCTGCTTCTCATAGATATAACAACGTCCATATCATCAG
FD953720       --> TTGATCTCCCTCCCTGCTTCTCATAGATATAACAACGTCCATATCATCAG
EX758763       --> TTGATCTCCCTCCCTGCTTCTCATAGATATAACAACGTCCATATCATCAG
EY896356       --> TTGATCTCCCTCCCTGCTTCTCATAGATATAACAACGTCCATATCATCAG
FD959098       --> TTGATCTCCCTCCCTGCTTCTCATAGATATAACAACGTCCATATCATCAG
FD547203       --> TTGATCTCCCTCCCTGCTTCTCATAGATATAGCAACGTCCATATCATCAG

               251    -    301
UN21520        --> TTGCATGAAAGTGTAGGGATGTTGCAGCGAGTGGGAAGCCTAGAGGCAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV528754       <-- TTGCATGAAAGTGTAGGGATGTTGCAGCGAGTGGGAAGCCTAGAGGCAAT  Raphanus raphanistrum subsp. maritimus
FD973979       <-- TTGCATGAAAGTGTAGGTATGTTGCAGCGAGTGGGAAGCCTAGAGGCAAT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD957585       <-- TTGCATGAAAGTGTAGGGATGTTGCAGCGAGTGGGAAGCCTAGAGGCAAT  Raphanus sativus cv Rat-Tail Radish #3870
FD548739       <-- TTGCATGAAAGTGTAGGGATGTTGCAGCGAGTGGGAAGCCTAGAGGCAAT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD971608       <-- TTGCATGAAAGTGTAGGTATGTTGCAGCGAGTGGGAAGCCTAGAGGCAAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY914421       <-- TTGCATGAAAGTGTAGGTATGTTGCAGCGAGTGGGAAGCCTAGAGGCAAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX888280       <-- TTGCAGGAAAGTGTAGGGATGTTGCAGCGAGTGGGAAGCCTAGAGGCAAT  Raphanus sativus var. oleiformis
EV539402       <-- TTGCATGAAAGTGTAGGTATGTTGCAGCGAGTGGGAAGCCTAGAGGCAAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX754109       <-- TTGCATGAAAGTGTAGGTATGTTGCAGCGAGTGGGAAGCCTAGAGGCAAT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD551870       <-- TTGCATGAAAGTGTAGGGATGTTGCAGCGAGTGGGAAGCCTAGAGGCAAT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD938239       <-- TTGCAGGAAAG--TAGGGATGTTGCAGCGAGTGGGGAGCCTAGAGGCAAT  Raphanus sativus var. oleiformis
FD958179       <-- TTGCATGAAAGTGTAGGGATGTTGCAGCGAGTGGGAAGCCTAGAGGCAAT  Raphanus sativus cv Rat-Tail Radish #3870
EX754433       <-- TTACATGAAAGTGTAGGTATGTTGCAGCGAGTGGGAAGCCTAGAGGCAAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY900927       <-- TTGCATGAAAGTGTAGGGATGTTGCAGCGAGTGGGAAGCCTAGAGGCAAT  Raphanus raphanistrum subsp. maritimus
FD962581       <-- TTGCATGAAAGTGTAGGGATGTTGCAGCGAGTGGGAAGCCTAGAGGCAAT  Raphanus raphanistrum subsp. maritimus
FD974163       <-- TTGCATGAAAGTGTAGGTATGTTGCAGCGAGTGGGAAGCCTAGAGGCAAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY910467       --> TTGCATGAAAGTGTAGGTATGTTGCAGCGAGTGGGAAGCCTAGAGGCAAT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD547710       --> TTGCATGAAAGTGTAGGGATGTTGCAGCGAGTGGGAAGCCTAGAGGCAAT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD934663       --> TTGCAGGAAAGT--AGGGATGTTGCAGCGAGTGGGGAGCCTAGAGGCAAT  Raphanus sativus var. oleiformis
FD953147       --> TTGCATGAAAGTGTAGGGATGTTGCAGCGAGTGGGAAGCCTAGAGGCAAT  Raphanus sativus cv Rat-Tail Radish #3870
FD953720       --> TTGCATGAAAGTGTAGGGATGTTGCAGCGAGTGGGAAGCCTAGAGGCAAT  Raphanus sativus cv Rat-Tail Radish #3870
EX758763       --> TTACATGAAAGTGTAGGTATGTTGCAGCGAGTGGGAAGCCTAGAGGCAAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY896356       --> TTGCATGAAAGTGTAGGGATGTTGCAGCGAGTGGGAAGCCTAGAGGCAAT  Raphanus raphanistrum subsp. maritimus
FD959098       --> TTGCATGAAAGTGTAGGGATGTTGCAGCGAGTGGGAAGCCTAGAGGCAAT  Raphanus raphanistrum subsp. maritimus
FD547203       --> TTGCATGAAAGTGTAGGGATGTTGCAGCGAGTGGGAAGCCTAGAGGCAAT  Raphanus raphanistrum subsp. raphanistrum (NY)

               301    -    351
UN21520        --> GCGAAATGTGTTGCAAATGCAGTCGCTCGGCACTGCCTCAAGAGCATTGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV528754       <-- GCGAAATGTGTTGCAAATGCAGTCGCTCGGCACTGCCTCAAGAGCATTGC
FD973979       <-- GCGAAATGTGTTGCAAATGCAGCCGCTCGGCACTGCCTCAAGAGCATTGC
FD957585       <-- GCGAAATGTGTTGCAAATGCAGTCGCTCGGCACTGCCTCAAGAGCATTGC
FD548739       <-- GCGAAATGTGTTGCAAATGCAGTCGCTCGGCACTGCCTCAAGAGCATTGC
FD971608       <-- GCGAAATGTGTTGCAAATGCAGTCGCTCGGCACTGCCTCAAGAGCATTGC
EY914421       <-- GCGAAATGTGTTGCAAATGCAGTCGCTCGGCACTGCCTCAAGAGCATTGC
EX888280       <-- GCGAAATGTGTTGCAAATGCAGTCGCTCGGCACTGCCTCAAGAGCATTGC
EV539402       <-- GCGAAATGTGTTGCAAATGCAGTCGCTCGGCACTGCCTCAAGAGCATTGC
EX754109       <-- GCGAAATGTGTTGCAAATGCAGTCGCTCGGCACTGCCTCAAGAGCATTGC
FD551870       <-- GCGAAATGTGTTGCAAATGC..............................
FD938239       <-- GCGAAATGTGTTGCAAATGCAGTCGCTCGGCACTGCCTCAAGAGCATTGC
FD958179       <-- GCGAAATGTGTTGCAAATGCAGTCGCTCGGCACTGCCTCAAGAGCATTGC
EX754433       <-- GCGAAATGTGTTGCAAATGCAGTCGCTCGGCACTGCCTCAAGAGCATTGC
EY900927       <-- GCGAAATGTGTTGCAAATGCAGTCGCTCGGCACTGCCTCAAGAGCATTGC
FD962581       <-- GCGAAATGTGTTGCAAATGCAGTCGCTCGGCACTGCCTCAAGAGCATTGC
FD974163       <-- GCGAAATGTGTTGCAAATGCAGTCGCTCGGCACTGCCTCAAGAGCATTGC
EY910467       --> GCGAAATGTGTTGCAAATGCAGTCGCTCGGCACTGCCTCAAGAGCATTGC
FD547710       --> GCGAAATGTGTTGCAAATGC..............................
FD934663       --> GCGAAATGTGTTGCAAATGCAGTCGCTCGGCACTGCCTCAAGAGCATTGC
FD953147       --> GCGAAATGTGTTGCAAATGCAGTCGCTCGGCACTGCCTCAAGAGCATTGC
FD953720       --> GCGAAATGTGTTGCAAATGCAGTCGCTCGGCACTGCCTCAAGAGCATTGC
EX758763       --> GCGAAATGTGTTGCAAATGCAGTCGCTCGGCACTGCCTCAAGAGCATTGC
EY896356       --> GCGAAATGTGTTGCAAATGCAGTCGCTCGGCACTGCCTCAAGAGCATTGC
FD959098       --> GCGAAATGTGTTGCAAATGCAGTCGCTCGGCACTGCCTCAAGAGCATTGC
FD547203       --> GCGAAATGTGTTGCAAATGCAGTCGCTCGACACTGCCTCAAGAGCATTGC

               351    -    401
UN21520        --> AACACTCGGCACTCGGGTTCGTCGTGTCTGCTCCTGGAACTACAAACTCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV528754       <-- AACACTCGGCACTCGGGTTCGTCGTGTCTGCTCCTGGAACTACAAACTCA  Raphanus raphanistrum subsp. maritimus
FD973979       <-- AACACTCGGCACTCGGGTTCGTCGTGTCTGCTCCTGGAACTACGAACTCA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD957585       <-- AACACCCGGCACTCGGGTTCGTCGTGTCTGCTCCTGGAACTACAAACTCA  Raphanus sativus cv Rat-Tail Radish #3870
FD548739       <-- AACACTCGGCACTCGGGTTCGTCGTGTCTGCTCCTGGAACTACAAACTCA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD971608       <-- AACACTCGGCACTCGGGTTCGTCGTGTCTGCTCCTGGAACTACGAACTCA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY914421       <-- AACACTCGGCACTCGGGTTCGTCGTGTCTGCTCCTGGAACTACGAACTCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX888280       <-- AACACTCGGCACTCGGGTTCGTCGTGTCTGCTCCTGGAACTACAAACTCA  Raphanus sativus var. oleiformis
EV539402       <-- AACACTCGGCACTCGGGTTCGTCGTGTCTGCTCCTGGAACTACGAACTCA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX754109       <-- AACACTCGGCACTCGGGTTCGTCGTGTCTGCTCCTGGAACTACGAACTCA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD551870       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD938239       <-- AACACTCGGCACTCGGGTTCGTCGTGTCTGCTCCTGGAACTACAAACTCA  Raphanus sativus var. oleiformis
FD958179       <-- AACACTCGGCACTCGGGTTCGTCGTGTCTGCTCCTGGA--AACAAACTCA  Raphanus sativus cv Rat-Tail Radish #3870
EX754433       <-- AACACTCGGCACTCGGGTTCGTCGTGTCTGCTCCTGGAACTACGAACTCA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY900927       <-- AACACTCGGCACTCGGGTTCGTCGTGTCTGCTCCTGGAACTACAAACTCA  Raphanus raphanistrum subsp. maritimus
FD962581       <-- AACACTCGGCACTCGGGTTCGTCGTGTCTGCTCCTGGAACTACAAACTCA  Raphanus raphanistrum subsp. maritimus
FD974163       <-- AACACTCGGCACTCGGGTTCGTCGTGTCTGCTCCTGGAACTACGAACTCA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY910467       --> AACACTCGGCACTCGGGTTCGTCGTGTCTGCTCCTGGAACTACGAACTCA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD547710       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD934663       --> AACACTCGGCACTCGGGTTCGTCGTGTCTGCTCCTGGAACTACAAACTCA  Raphanus sativus var. oleiformis
FD953147       --> AACACTCGGCACTCGGGTTCGTCGTGTCTGCTCCTGGAACTACAAACTCA  Raphanus sativus cv Rat-Tail Radish #3870
FD953720       --> AACACTCGGCACTCGGGTTCGTCGTGTCTGCTCCTGGAA--ACAAACTCA  Raphanus sativus cv Rat-Tail Radish #3870
EX758763       --> AACACTCGGCACTCGGGTTCGTCGTGTCTGCTCCTGGAACTACGAACTCA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY896356       --> AACACTCGGCACTCGGGTTCGTCGTGTCTGCTCCTGGAACTACAAACTCA  Raphanus raphanistrum subsp. maritimus
FD959098       --> AACACTCGGCACTCGGGTTCGTCGTGTCTGCTCCTGGAACTACAAACTCA  Raphanus raphanistrum subsp. maritimus
FD547203       --> AACACTCGGCACTCGGGTTCGTCGTGTCTGCTCCTGGAACTACAAACTCA  Raphanus raphanistrum subsp. raphanistrum (NY)

               401    -    451
UN21520        --> CCACACACGTTCAGTCCACTCAAGTGGGTATTGCAGCTCTGTCCATCCAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV528754       <-- CCACACACGTTCAGTCCACTCAAGTGGGTATTGCAGCTCTGTCCATCCAC
FD973979       <-- CCACACACGTTCAGTCCACTCAAGTGGGTATTGCAGCTCTGTCCATCCAC
FD957585       <-- CCACACACGTTCAGTCCACTCAAGTGGGTATTGCAGCTCTGTCCATCCAC
FD548739       <-- CCACACACGTTAAGTCCACTCAAGTGGGTATTGCAGCTCTGTCCATCCAC
FD971608       <-- CCACACACGTTCAGTCCACTCAAGTGGGTATTGCAGCTCTGTCCATCCAC
EY914421       <-- CCACACACGTTCAGTCCACTCAAGTGGGTGTTGCAGCTCTGTCCATCCAC
EX888280       <-- CCACACACGTTCAGTCCACTCAAGTGGGTATTGCAGCTCTGTCCATCCAC
EV539402       <-- CCACACACGTTCAGTCCACTCAAGTGGGTATTGCAGCTCTGTCCATCCAC
EX754109       <-- CCACACACGTTCAGTCCACTCAAGTGGGTATTGCAGCTCTGTCCATCCAC
FD551870       <-- ..................................................
FD938239       <-- CCACACACGTTCAGTCCACTCAAGTGGGTATTACAGCTCTGTCCATCCAC
FD958179       <-- CCACACACGTTCAGTCCACTCAAGTGGGTATTGCAGCTCTGTCCATCCAC
EX754433       <-- CCACACACGTTCAGTCCACTCAAGTGGGTATTGCAGCTCTGTCCATCCAC
EY900927       <-- CCACACACGTTCAGTCCACTCAAGTGGGTATTGCAGCTCTGTCCATCCAC
FD962581       <-- CCACACACGTTCAGTCCACTCAAGTGGGTATTGCAGCTCTGTCCATCCAC
FD974163       <-- CCACACACGTTCAGTCCACTCAAGTGGGTATTGCAGCTCTGTCCATCCAC
EY910467       --> CCACACACGTTCAGTCCACTCAAGTGGGTGTTGCAGCTCTGTCCATCCAC
FD547710       --> ..................................................
FD934663       --> CCACACACGTTCAGTCCACTCAAGTGGGTATTACAGCTCTGTCCATCCAC
FD953147       --> CCACACACGTTCAGTCCACTCAAGTGGGTATTGCAGCTCTGTCCATCCAC
FD953720       --> CCACACACGTTCAGTCCACTCAAGTGGGTATTGCAGCTCTGTCCATCCAC
EX758763       --> CCACACACGTTCAGTCCACTCAAGTGGGTATTGCAGCTCTGTCCATCCAC
EY896356       --> CCACACACGTTCAGTCCACTCAAGTGGGTATTGCAGCTCTGTCCATCCAC
FD959098       --> CCACACACGTTCAGTCCACTCAAGTGGGTATTGCAGCTCTGTCCATCCAC
FD547203       --> CCACACACGTTCAGTCCACTCAAGTGGGTATTGCAGCTCTGTCCATCCAC

               451    -    501
UN21520        --> CACCGTCACCACCAAGACCACAGCCACCATCACCACCAGCTTCATGATTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV528754       <-- CACCGTCACCACCAAGACCACAGCCACCATCACCACCAGCTTCATGATTG
FD973979       <-- CACCGTCACCATCAAGACCACAGCCACCATCACCACCAGCTTCATGATTG
FD957585       <-- CACCGTCACCACCAAGACCACAGCCACCATCACCACCAGCTTCATGATTG
FD548739       <-- CACCGTCACCGCCAAGACCACAGCCACCATCACCACCAGCTTCATGATTG
FD971608       <-- CACCGTCACCACCAAGACCACAGCCACCATCACCACCAGCTTCATGATTG
EY914421       <-- CACCGTCACCGCCAAGACCACAGCCACCATCACCACCAGCTTCATGATTG
EX888280       <-- CACCGTCACCACCAAGACCACAGCCACCATCACCACCAACTTCATGATTG
EV539402       <-- CACCGTCACCATCAAGACCACAGCCACCATCACCACCAGCTTCATGATTG
EX754109       <-- CACCGTCACCACCAAGACCACAGCCACCATCACCACCAGCTTCATGATTG
FD551870       <-- ..................................................
FD938239       <-- CATCGTCACCACCAAGACCACAGCCACCATCACCACCAACTTCATGATTG
FD958179       <-- CACCGTCACCACCAAGACCACAGCCACCATCACCACCAGCTTCATGATTG
EX754433       <-- CACCGTCACCATCAAGACCACAGCCACCATCACCACCAGCTTCATGATTG
EY900927       <-- CACCGTCACCACCAAGACCACAGCCACCATCACCACCAGCTTCATGATTG
FD962581       <-- CACCGTCACCACCAAGACCACAGCCACCATCACCACCAGCTTCATGATTG
FD974163       <-- CACCGTCACCACCAAGACCACAGCCACCATCACCACCAGCTTCATGATTG
EY910467       --> CACCGTCACCGCCAAGACCACAGCCACCATCACCACCAGCTTCATGATTG
FD547710       --> ..................................................
FD934663       --> CATCGTCACCACCAAGACCACAGCCACCATCACCACCAACTTCATGATTG
FD953147       --> CACCGTCACCACCAAGACCACAGCCACCATCACCACCAGCTTCATGATTG
FD953720       --> CACCGTCACCACCAAGACCACAGCCACCATCACCACCAGCTTCATGATTG
EX758763       --> CACCGTCACCATCAAGACCACAGCCACCATCACCACCAGCTTCATGATTG
EY896356       --> CACCGTCACCACCAAGACCACAGCCACCATCACCACCAGCTTCATGATTG
FD959098       --> CACCGTCACCACCAAGACCACAGCCACCATCACCACCAGCTTCATGATTG
FD547203       --> CACCGTCACCACCAAGACCACAGCCACCATCACCACCAGCTCCATGATTG

               501    -    551
UN21520        --> TGGAAGATTTGGAAGAGCTGGAAATTGATACCATCTTCTTCTTCTTCTT-
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV528754       <-- TGGAAGATTTGGAAGAGCTGGAAATTGATACCATCTTCTTCTTCT--TT-  Raphanus raphanistrum subsp. maritimus
FD973979       <-- TGGAAGATTTGGAAGAGCTGGAAATTGATACCATCTTCCTCTTCT--TT-  Raphanus raphanistrum subsp. raphanistrum (MS)
FD957585       <-- TGGAAGATTTGGAAGAGCTGGAAATTGATACCATCTTCTTCTTCTTCTT-  Raphanus sativus cv Rat-Tail Radish #3870
FD548739       <-- TGGAAGATTTGGAAGAGCTGGAAATTGATACCATCTTCTTCTTCTTCTTC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD971608       <-- TGGAAGATTTGGAAGAGCTGGAAATTGATACCATCTTCTTCTTCT--TT-  Raphanus raphanistrum subsp. raphanistrum (MS)
EY914421       <-- TGGAAGATTTGGAAGAGCTGGAAATTGATACCATCTTCTTCTTCTTCTTC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX888280       <-- TGGAAGATTTGGAAGAGCTTGAAATTGATACCATCTTCTTCTTCTTCTTC  Raphanus sativus var. oleiformis
EV539402       <-- TGGAAGATTTGGAAGAGCTGGAAATTGATACCATCTTCTTCTTCT--TT-  Raphanus raphanistrum subsp. raphanistrum (MS)
EX754109       <-- TGGAAGATTTGGAAGAGCTGGAAATTGATACCATCTTCTTCTTCT--TT-  Raphanus raphanistrum subsp. raphanistrum (MS)
FD551870       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD938239       <-- TGGAAGATTTGGAAGAGCTTGAAATTGATACCATCTTCTTCTTCTTCTTC  Raphanus sativus var. oleiformis
FD958179       <-- TGGAAGATTTGGAAGAGCTGGAAATTGATACCATCTTCTTCTTCTTCTT-  Raphanus sativus cv Rat-Tail Radish #3870
EX754433       <-- TGGAAGATTTGGAAGAGCTGGAAATTGATACCATCTTCTTCTTCT--TT-  Raphanus raphanistrum subsp. raphanistrum (MS)
EY900927       <-- TGGAAGATTTGGAAGAGCTGGAAATTGATACCATCTTCTTC.........  Raphanus raphanistrum subsp. maritimus
FD962581       <-- TGGAAGATTTGGAAGAGCTGGAAATTGATACCATCTTCTTCTTCTTCTT-  Raphanus raphanistrum subsp. maritimus
FD974163       <-- TGGAAGATTTGGAAGAGCTGGAAATTGATACCATCTTCTTCTTCT--TT-  Raphanus raphanistrum subsp. raphanistrum (MS)
EY910467       --> TGGAAGATTTGGAAGAGCTGGAAATTGATACCATCTTCTTCTTCTTCTTC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD547710       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD934663       --> TGGAAGATTTGGAAGAGCTTGAAATTGATACCATCTTCTTCTTCTTCTTC  Raphanus sativus var. oleiformis
FD953147       --> TGGAAGATTTGGAAGAGCTGGAAATTGATACCATCTTCTTCTTCTTCTT-  Raphanus sativus cv Rat-Tail Radish #3870
FD953720       --> TGGAAGATTTGGAAGAGCTGGAAATTGATACCATCTTCTTCTTCTTCTT-  Raphanus sativus cv Rat-Tail Radish #3870
EX758763       --> TGGAAGATTTGGAAGAGCTGGAAATTGATACCATCTTCTTCTTCTT--T-  Raphanus raphanistrum subsp. raphanistrum (MS)
EY896356       --> TGGAAGATTTGGAAGAGCTGGAAATTGATACCATCTTCTTC.........  Raphanus raphanistrum subsp. maritimus
FD959098       --> TGGAAGATTTGGAAGAGCTGGAAATTGATACCATCTTCTTCTTCTTCTT-  Raphanus raphanistrum subsp. maritimus
FD547203       --> TGGAAGATTTGGAAGAGCTGGAAATTGATACCATCTTCTTCTTCTTCTTC  Raphanus raphanistrum subsp. raphanistrum (NY)

               551    -    601
UN21520        --> --T-TCTTTTATGTATTCTAAAAATATATGATTTTAGAAGTGAGACTGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV528754       <-- --A-TCTTTTATGTATTCTAAAAATATATGATTTTAGAAGTGAGACTGTT  Raphanus raphanistrum subsp. maritimus
FD973979       <-- --A-TCTGTTATGTATTCTAAAAATATATGATTTTAGAAGTGAGACTGTT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD957585       <-- --TATCTTTTATGTATTCTAAAAATATATGATTTTAGAAGTGAGACTGTT  Raphanus sativus cv Rat-Tail Radish #3870
FD548739       <-- TTTATCTTTTATGTATTCTAAAAATATATGATTTTAGAAGTGAGACTGTT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD971608       <-- --A-TCTGTTATGTATTCTAAAAATATATGATTTTAGAAGTGAGACTGTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY914421       <-- TTTATCTTTTATGTATTCTAAAAATATATGATTTTAGAAGTGAGACTGTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX888280       <-- TTTATCTTTTATGTATTCTAAAAATATATGATTTTAGAAGTGAGACTGTT  Raphanus sativus var. oleiformis
EV539402       <-- --A-TCTGTTATGTATTCTAAAAATATATGATTTTAGAAGTGAGACTGTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX754109       <-- --A-TCTGTTATGTATTCTAAAAATATATGATTTTAGAAGTGAGACTGTT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD551870       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD938239       <-- TTTATCTTTTATGTATTCTAAAAATATATGATTTTAGAAGTGAGACTGTT  Raphanus sativus var. oleiformis
FD958179       <-- --TATCTTTTATGTATTCTAAAAATATATGATTTTAGAAGTGAGACTGTT  Raphanus sativus cv Rat-Tail Radish #3870
EX754433       <-- --A-TCTGTTATGTATTCTAAAAATATATGATTTTAGAAGTGAGACTGTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY900927       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD962581       <-- --TATCTTTTATGTATTCTAAAAATATATGATTTTAGAAGTGAGACTGTT  Raphanus raphanistrum subsp. maritimus
FD974163       <-- --A-TCTGTTATGTATTCTAAAAATATATGATTTTAGAAGTGAGACTGTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY910467       --> TTTATCTTTTATGTATTCTAAAAATATATGATTTTAGAAGTGAGACTGTT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD547710       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD934663       --> TTTATCTTTTATGTATTCTAAAAATATATGATTTTAGAAGTGAGACTGTT  Raphanus sativus var. oleiformis
FD953147       --> --TATCTTTTATGTATTCTAAAAATATATGATTTTAGAAGTGAGACTGTT  Raphanus sativus cv Rat-Tail Radish #3870
FD953720       --> --TATCTTTTATGTATTCTAAAAATATATGATTTTAGAAGTGAGACTGTT  Raphanus sativus cv Rat-Tail Radish #3870
EX758763       --> --A-TCTGTTATGTATTCTAAAAATATATGATTTTAGAAGTGAGACTGTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY896356       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD959098       --> --TATCTTTTATGTATTCTAAAAATATATGATTTTAGAAGTGAGACTGTT  Raphanus raphanistrum subsp. maritimus
FD547203       --> TTTATCTTTTATGTATTCTAAAAATATATGATTTTAGAAGTGAGACTGTT  Raphanus raphanistrum subsp. raphanistrum (NY)

               601    -    651
UN21520        --> GTTTGTTAGATATC.....
                   ~~~~~~~~~~~~~~~~~~~
EV528754       <-- GTTTGTTAGATATCc....
FD973979       <-- GTTTGTTAGATATattcc.
FD957585       <-- GTTTGTTAGATATatttcc
FD548739       <-- GTTTGTTAGATATCc....
FD971608       <-- GTTTGTTcc..........
EY914421       <-- GTTTGTTAGATATatttcc
EX888280       <-- GTTTGTTAGATATCc....
EV539402       <-- GTTTGTTAGATATatcc..
EX754109       <-- GTTTGTTAGATATatttcc
FD551870       <-- ...................
FD938239       <-- GTTTGTTcc..........
FD958179       <-- GTTTGTTAGATcc......
EX754433       <-- GTTTGTTAGATATatttcc
EY900927       <-- ...................
FD962581       <-- GTTTtcc............
FD974163       <-- GTTTGTTcc..........
EY910467       --> GTTTGTTAGATATatttcc
FD547710       --> ...................
FD934663       --> GTTTGTTcc..........
FD953147       --> GTTTGTTAGATATCc....
FD953720       --> GTTTGTTAGATcc......
EX758763       --> GTTTGTTAGATATatttcc
EY896356       --> ...................
FD959098       --> GTTTtcc............
FD547203       --> GTTTGTTAGATATC.....