RadishBase

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Alignment for radish unigene UN21528

               1      -     51
UN21528        --> GGTTTGATATTTCGCAAGATGCGAGATTTACGGCCTTATATATAATTTAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV551519       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FY444391       <-- ..................................................  Raphanus sativus cv GSK3-1
FY444346       <-- ..................................................  Raphanus sativus cv GSK3-1
FY452007       <-- ..................................................  Raphanus sativus cv GSK3-1
EX890111       <-- ..................................................  Raphanus sativus var. oleiformis
FY446298       <-- ..................................................  Raphanus sativus cv GSK3-1
FD939893       <-- ..................................................  Raphanus sativus var. oleiformis
EW714981       <-- ..................................................  Raphanus sativus var. oleiformis
EV546600       --> GGTTTGATATTTCGCAAGATGCGAGATTTACGGCCTTATATATAATTTAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX767075       --> GGTTTGATATTTCGCAAGATGCGAGATTTACGGCCTTATATATAATTTAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EW719767       --> .............GCAAGATGCGAGATTTACGGCCTTATATATAATTTAA  Raphanus sativus var. oleiformis
EY935914       --> ............................cACGGCCTTATATATAATTTAA  Raphanus sativus cv Early Scarlet Globe
EW739306       --> ...............................GGCCTTATATATAATTTAA  Raphanus sativus cv Rat-Tail Radish #3870
FD935908       --> ...........................................AATTTAA  Raphanus sativus var. oleiformis
EX766849       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX893692       --> ..................................................  Raphanus sativus var. oleiformis
FD553579       --> ..................................................  Raphanus raphanistrum subsp. landra
EY926648       --> ..................................................  Raphanus sativus var. oleiformis

               51     -    101
UN21528        --> TAAATAAACATAAAACACCAAACTTACATAAGATTTTGAAATCATAGTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV551519       <-- ......................................AAATCATAGTTT  Raphanus raphanistrum subsp. raphanistrum (NY)
FY444391       <-- ..................................................  Raphanus sativus cv GSK3-1
FY444346       <-- ..................................................  Raphanus sativus cv GSK3-1
FY452007       <-- ..................................................  Raphanus sativus cv GSK3-1
EX890111       <-- ..................................................  Raphanus sativus var. oleiformis
FY446298       <-- ..................................................  Raphanus sativus cv GSK3-1
FD939893       <-- ..................................................  Raphanus sativus var. oleiformis
EW714981       <-- ..................................................  Raphanus sativus var. oleiformis
EV546600       --> TAAATAAACATAAAACACCAAACTTACATAAGATTTTGAAATCATAGTTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX767075       --> TAAATAAACATAAAACACCAAACTTACATAAGATTTTGAAATCATAGTTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EW719767       --> CAAATAAACATAAAACACCAAACTTACATAAGATTTTGAAATCATAGTTT  Raphanus sativus var. oleiformis
EY935914       --> CAAATAAACATAAAACACCAAACTTACATAAGATTTTGAAATCATAGTTT  Raphanus sativus cv Early Scarlet Globe
EW739306       --> TAAATAAACATAAAACACCAAACTTACATAAGATTTTGAAATCATAGTTT  Raphanus sativus cv Rat-Tail Radish #3870
FD935908       --> CAAATAAACATAAAACACCAAACTTACATAAGATTTTGAAATCATAGTTT  Raphanus sativus var. oleiformis
EX766849       --> .........................gCATAAGATTTTGAAATCATAGTTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX893692       --> .............................cAGATTTTGAAATCATAGTTT  Raphanus sativus var. oleiformis
FD553579       --> .............................gAGATTTTGAAATCATAGTTT  Raphanus raphanistrum subsp. landra
EY926648       --> .....................................GAAATCATAGTTT  Raphanus sativus var. oleiformis

               101    -    151
UN21528        --> TTAAAAAGAAGAGAAATCCAACGAGTAAAGATGCCAAAGTTTCTAGAGTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV551519       <-- T-AAAAAGAAGAGAAATCCAACGAGTAAAGATGCCAAAGTTTCTAGAGTC  Raphanus raphanistrum subsp. raphanistrum (NY)
FY444391       <-- ..................................................  Raphanus sativus cv GSK3-1
FY444346       <-- ..................................................  Raphanus sativus cv GSK3-1
FY452007       <-- ..................................................  Raphanus sativus cv GSK3-1
EX890111       <-- ..................................................  Raphanus sativus var. oleiformis
FY446298       <-- ..................................................  Raphanus sativus cv GSK3-1
FD939893       <-- ..................................................  Raphanus sativus var. oleiformis
EW714981       <-- ..................................................  Raphanus sativus var. oleiformis
EV546600       --> TTAAAAAGAAGAGAAATCCAACGAGTAAAGATGCCAAAGTTTCTAGAGTC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX767075       --> TTAAAAAGAAGAGAAATCCAACGAGTAAAGATGCCAAAGTTTCTAGAGTC  Raphanus raphanistrum subsp. raphanistrum (NY)
EW719767       --> TTAAAAAGAAGAGAAATCCAACGAGTAAAGATACCAAAGTTTCTAGAGTC  Raphanus sativus var. oleiformis
EY935914       --> TTAAAAAGAAGAGAAATCCAACGAGTAAAGATACCAAAGTTTCTAGAGTC  Raphanus sativus cv Early Scarlet Globe
EW739306       --> TTAAAAAGAAGAGAAATCCAACGAGTAAAGATGCCAAAGTTTCTAGAGTC  Raphanus sativus cv Rat-Tail Radish #3870
FD935908       --> TTAAAAAGAAGAGAAATCCAACGAGTAAAGATACCAAAGTTTCTAGAGTC  Raphanus sativus var. oleiformis
EX766849       --> TTAAAAAGAAGAGAAATCCAACGAGTAAAGATGCCAAAGTTTCTAGAGTC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX893692       --> TTAAAAAGAAGAGAAATCCAACGAGTAAAGATACCAAAGTTTCTAGAGTC  Raphanus sativus var. oleiformis
FD553579       --> TTAAAAAGAAGAGAAATCCAACGAGTAAAGATGCCAAAGTTTCTAGAGTC  Raphanus raphanistrum subsp. landra
EY926648       --> TTAAAAAGAAGAGAAATCCAACGAGTAAAGATACCAAAGTTTCTAGAGTC  Raphanus sativus var. oleiformis

               151    -    201
UN21528        --> GAGTCGACCGCAGTCGTATTAAGTATGACTTAAAATGATAATTAAAGCAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV551519       <-- GAGTCGACCGCAGTCGTATTAAGTATGACTTAAAATGATAATTAAAGCAC
FY444391       <-- ..................................................
FY444346       <-- ..................................................
FY452007       <-- ..................................................
EX890111       <-- ..................................................
FY446298       <-- ..................................................
FD939893       <-- ..................................................
EW714981       <-- ..................................................
EV546600       --> GAGTCGACCGCAGTCGTATTAAGTATGACTTAAAATGATAATTAAAGCAC
EX767075       --> GAGTCGACCGCAGTCGTATTAAGTACGACTTAAAATGATAATTAAAGCAC
EW719767       --> GAGTCGACCGCAGTCGTATTAAGTATGACTTAAAATGATAATTAAAGCAC
EY935914       --> GAGTCGACCGCAGTCGTATTAAGTATGACTTAAAATGATAATTAAAGCAC
EW739306       --> GAGTCGACCGCAGTCGTATTAAGTATGACTTAAAATGATAATTAAAGCAC
FD935908       --> GAGTCGACCGCAGTCGTATTAAGTATGACTTAAAATGATAATTAAAGCAC
EX766849       --> GAGTCGACCGCAGTCGTATTGAGTATGACTTAAAATGATAATTAAAGCAC
EX893692       --> GAGTCGACCGCAGTCGTATTAAGTATGACTTAAAATGATAATTAAAGCAC
FD553579       --> GAGTCGACCGCAGTCGTATTAAGTATGACTTAAAATGATAATTAAAGCAC
EY926648       --> GAGTCGACCGCAGTCGTATTAAGTATGACTTAAAATGATAATTAAAGCAC

               201    -    251
UN21528        --> AAAACCTCACACTTAAATACTAGTTATAGTTGTAAAGTGTCCATCAAGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV551519       <-- AAAACCTCACACTTAAATACTAGTTATAGTTGTAAAGTGTCCATCAAGTT
FY444391       <-- ..................................................
FY444346       <-- ..................................................
FY452007       <-- ..................................................
EX890111       <-- ..................................................
FY446298       <-- ..................................................
FD939893       <-- ..................................................
EW714981       <-- ..................................................
EV546600       --> AAAACCTCACACTTAAATACTAGTTATAGTTGTAAAGTGTCCATCAAGTT
EX767075       --> AAAACCTCACACTTAAATACTAGTTATAGTTGTAAAGTGTCCATCAAGTT
EW719767       --> AAAACC............................................
EY935914       --> AAA-CCTCACACTTAAATACTAGTTATAGTTGTAAAGTGTCCATCAAGTT
EW739306       --> AAAACCTCACACTTAAATACTAGTTATAGTTGTAAAGTGTCCATCAAGTT
FD935908       --> AAAACCTCACACTTAAATACTAGTTATAGTTGTGAAGTGTCCATCAAGTT
EX766849       --> AAAACCTCACACTTAAATACTAGTTATAGTTGTAAAGTGTCAATCAAGTT
EX893692       --> AAAACCTCACACTTAAATACTAGTTATAGTTGTGAAGTGTCCATCAAGTT
FD553579       --> AAAACCTCACACTTAAATACTAGTTATAGTTGTAAAGTGTCCATCAAGTT
EY926648       --> AAAACCTCACACTTAAATACTAGTTATAGTTGTAAAGTGTCCATCAAGTT

               251    -    301
UN21528        --> TCTAGAGTCGGCCGCAATCGTATTTAGTATGACGAATCTGATGACGTCCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV551519       <-- TCTAGAGTCGGCCGCAATCGTATTTAGTATGACGAATCTGATGACGTCCA  Raphanus raphanistrum subsp. raphanistrum (NY)
FY444391       <-- ..................................................  Raphanus sativus cv GSK3-1
FY444346       <-- ..................................................  Raphanus sativus cv GSK3-1
FY452007       <-- ..................................................  Raphanus sativus cv GSK3-1
EX890111       <-- ..................................................  Raphanus sativus var. oleiformis
FY446298       <-- ..................................................  Raphanus sativus cv GSK3-1
FD939893       <-- ..................................................  Raphanus sativus var. oleiformis
EW714981       <-- ..................................................  Raphanus sativus var. oleiformis
EV546600       --> TCTAGAGTCGGCCGCAATCGTATTTAGTATGACGAATCTGATGACGTCCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX767075       --> TCTAGAGTCGGCCGCAATCGTATTTAGTATGACGAATCTGATGACGTCCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EW719767       --> ..................................................  Raphanus sativus var. oleiformis
EY935914       --> TCTAGAGTCGGCCGCAATCGTATTTAGTATGACGAATCTGATGACGCCCA  Raphanus sativus cv Early Scarlet Globe
EW739306       --> TCTAGAGTCGGCCGCAATCGTATTTAGTATGACGAATCTGATGACGTCCA  Raphanus sativus cv Rat-Tail Radish #3870
FD935908       --> TCTAGAGTCGGCCGCAATCGTATTTAGTATGACGAATATGATGACGCCCA  Raphanus sativus var. oleiformis
EX766849       --> TCTAGAGTCGGCCGCAATCGTATTTAGTATGACGAATCTGATGACGTCCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX893692       --> TCTAGAGTCGGCCGCAATCGTATTTAGTATGACGAATCTGATGACGCCCA  Raphanus sativus var. oleiformis
FD553579       --> TCTAGAGTCGGCCGCAATCGTATTTAGTATGACGAATCTGATGACGTCCA  Raphanus raphanistrum subsp. landra
EY926648       --> TCTAGAGTCGGCCGCAATCGTATTTAGTATGACGAATCTGATGACGCCCA  Raphanus sativus var. oleiformis

               301    -    351
UN21528        --> AACAACAGCACCAACAACACAATAAACATGAGCCTGACGACCGTTGACTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV551519       <-- AACAACAGCACCAACAACACAATAAACATGAGCCTGACGACCGTTGACTG
FY444391       <-- ..................................................
FY444346       <-- ..................................................
FY452007       <-- ..................................................
EX890111       <-- ..................................................
FY446298       <-- ..................................................
FD939893       <-- ..................................................
EW714981       <-- ..................................................
EV546600       --> AACAACAGCACCAACAACACAATAAACATGAGCCTGACGACCGTTGACTG
EX767075       --> AACAACAGCACCAACAACACAATAAACATGAGCCTGACGACCGTTGACTG
EW719767       --> ..................................................
EY935914       --> AACAACAGCACCAACAACACAATAAACATGAGCCTGACGACCGTTGACTG
EW739306       --> AACAACAGCACCAACAACACAATAAACATGAGCCTGACGACCGTTGACTG
FD935908       --> AACAACAGCACCAACAACACAATAAACATGAGCCTGACGACCGTTGACTG
EX766849       --> AACAACAGCACCAACAACACAATAAACATGAGCCTGACGACCGTTGACTG
EX893692       --> AACAACAGCACCAACAACACAATAAACATGAGCCTGACGACCGTTGACTG
FD553579       --> AACAACAGCAACAACAACACAATAAACATGAGCCTGACGACCGTTGACTG
EY926648       --> AACAACAGCACCAACAACACAATAAACATGAGCCTGACGACCGTTGACTG

               351    -    401
UN21528        --> CGTTTGTAGCGACCGTCCCGTCAAATACGTCTGCGTCGAAAGCGCGACTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV551519       <-- CGTTTGTAGCGACCGTCCCGTCAAATACGTCTGCGTCGAAAGCGCGACTA  Raphanus raphanistrum subsp. raphanistrum (NY)
FY444391       <-- ..................................................  Raphanus sativus cv GSK3-1
FY444346       <-- ..................................................  Raphanus sativus cv GSK3-1
FY452007       <-- ..................................................  Raphanus sativus cv GSK3-1
EX890111       <-- ..................................................  Raphanus sativus var. oleiformis
FY446298       <-- ..................................................  Raphanus sativus cv GSK3-1
FD939893       <-- ..................................................  Raphanus sativus var. oleiformis
EW714981       <-- ..................................................  Raphanus sativus var. oleiformis
EV546600       --> CGTTTGTAGCGACCGTCCCGTCAAATACGTCTGCGTCGAAAGCGCGACTA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX767075       --> CGTTTGTAGCGACCGTCCCGTCAAATACGTCTGCGTCGAAAGCGCGACTA  Raphanus raphanistrum subsp. raphanistrum (NY)
EW719767       --> ..................................................  Raphanus sativus var. oleiformis
EY935914       --> CGTTTGTAGCGACCGTCCCGTCAAATACGTCTGCGTCGAAAGCGCGACTA  Raphanus sativus cv Early Scarlet Globe
EW739306       --> CGTTTGTAGCGACCGTCCCGTCAAATACGTCTGCGTCGAAAGCGCGACTA  Raphanus sativus cv Rat-Tail Radish #3870
FD935908       --> CGTTTGTAGCGACCGTCCCGTCAAATACGTCTGCGTCGAAAGCGCGACTA  Raphanus sativus var. oleiformis
EX766849       --> CGTTTGTAGCGACCGTCCCGTCAAATACGTCTGCGTCGAAAGCGCGACTA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX893692       --> CGTTTGTAGCGACCGTCCCGTCAAATACGTCTGCGTCGAAAGCGCGACTA  Raphanus sativus var. oleiformis
FD553579       --> CGTTTGTAGCGACCGTCCCGTCAAATACGTCTGCGTCGAAAGCGCGACTA  Raphanus raphanistrum subsp. landra
EY926648       --> CGTTTGTAGCGACCGTCCCGTCAAATACGTCTGCGTCGAAAGCGCGACTA  Raphanus sativus var. oleiformis

               401    -    451
UN21528        --> ACCTCATCCTACGTTCATTCACATACTCATCGATAGCTTCTCCAATGCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV551519       <-- ACCTCATCCTACGTTCATTCACATACTCATCGATAGCTTCTCCAATGCTT  Raphanus raphanistrum subsp. raphanistrum (NY)
FY444391       <-- ..................................................  Raphanus sativus cv GSK3-1
FY444346       <-- ..................................................  Raphanus sativus cv GSK3-1
FY452007       <-- ..................................................  Raphanus sativus cv GSK3-1
EX890111       <-- ..................................................  Raphanus sativus var. oleiformis
FY446298       <-- ..................................................  Raphanus sativus cv GSK3-1
FD939893       <-- ..................................................  Raphanus sativus var. oleiformis
EW714981       <-- ..................................................  Raphanus sativus var. oleiformis
EV546600       --> ACCTCATCCTACGTTCATTCACATACTCATCGATAGCTTCTCCAATGCTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX767075       --> ACCTCATCCTACGTTCATTCACATACTCATCGATAGCTTCTCCAATGCTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EW719767       --> ..................................................  Raphanus sativus var. oleiformis
EY935914       --> GTCTCATCCTACGTTCATTCACATACTCATCAATAGCTTCTCCAATGCTT  Raphanus sativus cv Early Scarlet Globe
EW739306       --> ACCTCATCCTACGTTCATTCACATACTCATCGATAGCTTCTCCAATGCTT  Raphanus sativus cv Rat-Tail Radish #3870
FD935908       --> GTCTCATCCTACGTTCATTCACATACTCATCAATAGCTTCTCCAATGCTT  Raphanus sativus var. oleiformis
EX766849       --> ACCTCATCCTACGTTCATTCACATACTCATCGATAGCTTCTCCAATGCTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX893692       --> GTCTCATCCTACGTTCATTCACATACTCATCAATAGCTTCTCCAATGCTT  Raphanus sativus var. oleiformis
FD553579       --> ACCTCATCCTACGTTCATTCACATACTCATCGATAGCTTCTCCAATGCTT  Raphanus raphanistrum subsp. landra
EY926648       --> GTCTCATCCTACGTTCATTCACATACTCATCAATAGCTTCTCCAATGCTT  Raphanus sativus var. oleiformis

               451    -    501
UN21528        --> TTCACCGAACAACCCTTTAACGAGTCTCCATGGTCCGGACCCATTTTCCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV551519       <-- TTCACCGAACAACCCTTTAACGAGTCCCCATGGTCCGGACCCATTTTCCT  Raphanus raphanistrum subsp. raphanistrum (NY)
FY444391       <-- ..................................................  Raphanus sativus cv GSK3-1
FY444346       <-- ..................................................  Raphanus sativus cv GSK3-1
FY452007       <-- ..................................................  Raphanus sativus cv GSK3-1
EX890111       <-- ..................................................  Raphanus sativus var. oleiformis
FY446298       <-- ..................................................  Raphanus sativus cv GSK3-1
FD939893       <-- ..................................................  Raphanus sativus var. oleiformis
EW714981       <-- ..................................................  Raphanus sativus var. oleiformis
EV546600       --> TTCACCGAACAACCCTTTAACGAGTCCCCATGGTCCGGACCCATTTTCCT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX767075       --> TTCACCGAACAACCCTTTAACGAGTCTCCATGGTCCGGACCCATTTTCCT  Raphanus raphanistrum subsp. raphanistrum (NY)
EW719767       --> ..................................................  Raphanus sativus var. oleiformis
EY935914       --> TTCACAGAACAATCCTTTAACGAGTCTCCATGGTCCGGACCCATTTTCCT  Raphanus sativus cv Early Scarlet Globe
EW739306       --> TTCACCGAACAACCCTTTAACGAGTCTCCATGGTCCGGACCCATTTTCCT  Raphanus sativus cv Rat-Tail Radish #3870
FD935908       --> TTCACAGAACAATCCTTTAACGAGTCTCCATGGTCCGGACCCATTTTCCT  Raphanus sativus var. oleiformis
EX766849       --> TTCACCGAACAACCCTTTAACGAGTCTCCATGGTCCGGACCCATTTTCCT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX893692       --> TTCAAAGAACAATCCTTTAACGAGTCTCCATGGTCCGGACCCATTTTCCT  Raphanus sativus var. oleiformis
FD553579       --> TTCACCGAACAACCCTTTAACGAGTCTCCATGGTCCGGACCCATTTTCCT  Raphanus raphanistrum subsp. landra
EY926648       --> TTCACAGAACAATCCTTTAACGAGTCTCCATGGTCCGGACCCACTTTCCT  Raphanus sativus var. oleiformis

               501    -    551
UN21528        --> AGCTAGACATCTAGCAAGAACAACCGAATCCTCAAGCGCAGCCGAGCCGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV551519       <-- AGCTAGACATCTAGCAAGAACAACCGAATCCTCAAGCGCAGCCGAGCCGC  Raphanus raphanistrum subsp. raphanistrum (NY)
FY444391       <-- ..................................................  Raphanus sativus cv GSK3-1
FY444346       <-- ..................................................  Raphanus sativus cv GSK3-1
FY452007       <-- ..................................................  Raphanus sativus cv GSK3-1
EX890111       <-- ..................................................  Raphanus sativus var. oleiformis
FY446298       <-- ..................................................  Raphanus sativus cv GSK3-1
FD939893       <-- ..................................................  Raphanus sativus var. oleiformis
EW714981       <-- ..................................................  Raphanus sativus var. oleiformis
EV546600       --> AGCTAGACATCTAGCAAGAACAACCGAATCCTCAAGCGCAGCCGAGCCGC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX767075       --> AGCTAGACATCTAGCAAGAACAACCGAATCCTCAAGCGCAGCCGAGCCGC  Raphanus raphanistrum subsp. raphanistrum (NY)
EW719767       --> ..................................................  Raphanus sativus var. oleiformis
EY935914       --> AGCTAGACATCTAGCAAGAACAACGGAATCCTCTAGCGCAGCCGAGCCGC  Raphanus sativus cv Early Scarlet Globe
EW739306       --> AGCTAGACATCTAGCAAGAACAACCGAATCCTCAAGCGCAGCCGAGCCGC  Raphanus sativus cv Rat-Tail Radish #3870
FD935908       --> AGCTAGACATCTAGCAAGAACAACGGAATCCTCTAGCGCAGCCGAGCCGC  Raphanus sativus var. oleiformis
EX766849       --> AGTTAGACATCTAGCAAGAACAACCGAATCCTCAAGCGCAGCCGAGCCGC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX893692       --> AGCTAGACATCTAGCAAGAACAACGGAATCCTCTAGCGCAGCCGAGCCGC  Raphanus sativus var. oleiformis
FD553579       --> AGCTAGACATCTAGCAAGAACAACCGAATCCTCAAGCGCAGCCGAGCCGC  Raphanus raphanistrum subsp. landra
EY926648       --> AGCTAGACATCTAGCAAGAACAACGGAATCCTCTAGCGCAGCCGAGCCGC  Raphanus sativus var. oleiformis

               551    -    601
UN21528        --> CTTGTCCGAGGAACGGACCCATCACGTGCATTGCATCGCCAGCTACAGTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV551519       <-- CTTGTCCGAGGAACGGACCCATCACGTGCATTGCATCGCCAGCTACAGTC  Raphanus raphanistrum subsp. raphanistrum (NY)
FY444391       <-- .....................TCACGTGCATTGCATCGCCAGCTACAGTC  Raphanus sativus cv GSK3-1
FY444346       <-- ....................................CGCCAGCTACAGTC  Raphanus sativus cv GSK3-1
FY452007       <-- ..................................................  Raphanus sativus cv GSK3-1
EX890111       <-- ..................................................  Raphanus sativus var. oleiformis
FY446298       <-- ..................................................  Raphanus sativus cv GSK3-1
FD939893       <-- ..................................................  Raphanus sativus var. oleiformis
EW714981       <-- ..................................................  Raphanus sativus var. oleiformis
EV546600       --> CTTGTCCGAGGAACGGACCCATCACGTGCATTGCATCGCCAGCTACAGTC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX767075       --> CTTGTCCGAGGAACGGACCCATCACGTGCATTGCATCACCAGCTACAGTC  Raphanus raphanistrum subsp. raphanistrum (NY)
EW719767       --> ..................................................  Raphanus sativus var. oleiformis
EY935914       --> CTTGTCCGAGGAATGGACCCATCACGTGCATTGCATCGCCAGCTACAGTC  Raphanus sativus cv Early Scarlet Globe
EW739306       --> CTTGTCCGAGGAACGGACCCATCACGTGCATTGCATCGCCAGCTACAGTC  Raphanus sativus cv Rat-Tail Radish #3870
FD935908       --> CTTGTCCGAGGAATGGACCCATCACGTGCATTGCATCGCCAGCTACAGTC  Raphanus sativus var. oleiformis
EX766849       --> CTTGTCCGAGGAACGGACCCATCACGTGCATTGCATCGCCAGCTACAGTC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX893692       --> CTTGTCCGAGGAATGGACCCATCACGTGCATTGCATCGCCAGCTACAGTC  Raphanus sativus var. oleiformis
FD553579       --> CTTGTCCGAGGAACGGACCCATCACGTGCATTGCATCGCCAGCTACAGTC  Raphanus raphanistrum subsp. landra
EY926648       --> CTTGTCCGAGGAATGGACCCATCACGTGCATTGCATCGCCAGCTACAGTC  Raphanus sativus var. oleiformis

               601    -    651
UN21528        --> ACGGTCCCACGACGGAATTTCCCGAACATGATTTCCAACGGCGAACGGTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV551519       <-- ACGGCCCCACGACGGAATTTCCCGAACATGATTTCCAACGGCGAACGGTA  Raphanus raphanistrum subsp. raphanistrum (NY)
FY444391       <-- ACGGTCCCACGACGGAATTTCCCGAACATGATTTCCAACGGCGAACGGTA  Raphanus sativus cv GSK3-1
FY444346       <-- ACGGTCCCACGACGGAATTTCCCGAACATGATTTCCAACGGCGAACGGTA  Raphanus sativus cv GSK3-1
FY452007       <-- ...........ACGGAATTTCCCGAACATGATTTCCAACGGCGAACGGTA  Raphanus sativus cv GSK3-1
EX890111       <-- ..................................................  Raphanus sativus var. oleiformis
FY446298       <-- ..................................................  Raphanus sativus cv GSK3-1
FD939893       <-- ..................................................  Raphanus sativus var. oleiformis
EW714981       <-- ..................................................  Raphanus sativus var. oleiformis
EV546600       --> ACGGCCCCACGACGGAATTTCCCGAACATGATTTCCAACGGCGAACGGT.  Raphanus raphanistrum subsp. raphanistrum (NY)
EX767075       --> ACGGTCCCACGACGGAATTTCCCGAACATGATTTCCAACGGCGAACGGTA  Raphanus raphanistrum subsp. raphanistrum (NY)
EW719767       --> ..................................................  Raphanus sativus var. oleiformis
EY935914       --> ACGGTCCCACGTCTAAATTTCCCGAACATGATTTCCAACGGCGAACGGTA  Raphanus sativus cv Early Scarlet Globe
EW739306       --> ACGGTCCCACGACGGAATTTCCCGAACATGATTTCCAACGGCGAACGGTA  Raphanus sativus cv Rat-Tail Radish #3870
FD935908       --> ACGGTCCCACGTCTAAATTTCCCGAACATGATTTCCAACGGCGAACGGTA  Raphanus sativus var. oleiformis
EX766849       --> ACGGTCCCACGACGGAATTTCCCGAACATGATTTCCAACGGCGAACGGTA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX893692       --> ACGGTCCCACGTCAAAATTTCCCGAACATGATTTCCAACGGCGAACGGTA  Raphanus sativus var. oleiformis
FD553579       --> ACGGTCCCACGACGGAATTTCCCGAACATGATTTCCAACGGCGAACGGTA  Raphanus raphanistrum subsp. landra
EY926648       --> ACGGTCCCACGTCTAAATTTCCCGAACATGATTTCCAACGGCGAACGGTA  Raphanus sativus var. oleiformis

               651    -    701
UN21528        --> CCTTAAATGCGTCAACGTTAATGCCTCCACATCGCATCTTTTCACCATTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV551519       <-- CCTTAAATGCGTCAACGTTAATGCCTCCACATCGCTTCTTTTCACCATTT  Raphanus raphanistrum subsp. raphanistrum (NY)
FY444391       <-- CCTTAAATGCGTCAACGTTAATGCCTCCACATCGCATCTTTTCACCATTT  Raphanus sativus cv GSK3-1
FY444346       <-- CCTTAAATGCGTCAACGTTAATGCCTCCACATCGCATCTTTTCACCATTT  Raphanus sativus cv GSK3-1
FY452007       <-- CCTAAAATGCGTCAACGTTAATGCCTCCACATCGCATCTTTTCACCATTT  Raphanus sativus cv GSK3-1
EX890111       <-- ..................................................  Raphanus sativus var. oleiformis
FY446298       <-- ..................................................  Raphanus sativus cv GSK3-1
FD939893       <-- ..................................................  Raphanus sativus var. oleiformis
EW714981       <-- ..................................................  Raphanus sativus var. oleiformis
EV546600       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX767075       --> CCTTAAATGCGTCAACGTTAATGCCTCCACATCGCTTCTTTTCACCATTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EW719767       --> ..................................................  Raphanus sativus var. oleiformis
EY935914       --> CCTTAAGTGTGTCAAAGTTAATGCCTCCACATCGCATCTTTTCACCATTT  Raphanus sativus cv Early Scarlet Globe
EW739306       --> CCTTAAATGC........................................  Raphanus sativus cv Rat-Tail Radish #3870
FD935908       --> CCTTAAGTGTGTCAAAGTTAATGCCTCCACATCGCATCTTTTCACCATTT  Raphanus sativus var. oleiformis
EX766849       --> CCTTAAATGCGTCAACGTTAATGCCTCCACATCGCTTCTTTTCACCATTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX893692       --> CCTTAAGTGTGTCAAAGTTAATGCCTCCACATCGCATCTTTTCACCATTT  Raphanus sativus var. oleiformis
FD553579       --> CCTTAAATGCGTCAACGTTAATGCCTCCACATCGCTTCTTTTCACCATTT  Raphanus raphanistrum subsp. landra
EY926648       --> CCTTAAGTGTGTCAAAGTTAATGCCTCCACATCGCATCTTTTCACCATTT  Raphanus sativus var. oleiformis

               701    -    751
UN21528        --> CTTTCCAGTCTTCAGATAACTTATCGACCCATTTTAGAGTCACCTTTGCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV551519       <-- CTTTCCAGTCTTCAGATAACTTATCGACCCATTTTAGAGTCACCTTTGCG
FY444391       <-- CTTTCCAGTCTTCAGATAACTTATCGACCCATTTTAGAGTCACCTTTGCG
FY444346       <-- CTTTCCAGTCTTCAGATAACTTATCGACCCATTTTAGAGTCACCTTTGCG
FY452007       <-- CTTTCCAGTCTTCAGATAACTTATCGACCCATTTTAGAGTCACCTTTGCG
EX890111       <-- ..................................................
FY446298       <-- ..................................................
FD939893       <-- ..................................................
EW714981       <-- ..................................................
EV546600       --> ..................................................
EX767075       --> CTTTCCAGTCTTCAGATAACTTATCGACCCATTTTAGAGTCACCTTTGCG
EW719767       --> ..................................................
EY935914       --> CTTTCCAGTCTTCAGATAACTTATCGACCCATTTTAGAGTCACCTTTGCG
EW739306       --> ..................................................
FD935908       --> CTTTCCAGTCTTCAGATAA...............................
EX766849       --> CTTTCCAGTCTTCAGATAACTTATCGACCCATTTTAGAGTCACCTTTGCG
EX893692       --> CTTTCCAGTCTTCAGATAACTTATCGACCCATTTTAGAGTCAACTTTGCG
FD553579       --> ATTTCCAGTCTTCAGATAACTTATCGACCCATTTTAAAGTCACCTTTGCG
EY926648       --> CTTTCCAGTCTTCAGATAACTTATCGACCCATTTTAGAGTCACCTTTGCG

               751    -    801
UN21528        --> ATCGATTCTTGATCCTTA-CC-TTGTATTGGCTGTCTTGCATATGCACTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV551519       <-- ATCGATTCTTGATCCTTAACC-TTGTATTGGCTGTCTTGCATATGCACTA
FY444391       <-- ATCGATTCTTGATCCTTAACC-TTGTATTGGCTGTCTTGCATATGCACTA
FY444346       <-- ATCGATTCTTGATCCTTAACC-TTGTATTGGCTGTCTTGCATATGCACTA
FY452007       <-- ATCGATTCTTGATCCTTAACC-TTGTATTGGCTGTCTTGCATATGCACTA
EX890111       <-- .........................TATTGGCTGTCTTGCATATGCACTA
FY446298       <-- ..................................................
FD939893       <-- ..................................................
EW714981       <-- ..................................................
EV546600       --> ..................................................
EX767075       --> A.................................................
EW719767       --> ..................................................
EY935914       --> ATCGATTCTTGATCCTTA-CCGTTGTGTTGACTGTCTTGCATATGCACTA
EW739306       --> ..................................................
FD935908       --> ..................................................
EX766849       --> ATCGATTCTTGATCCTTAACC-TTGTATTGGCTGTCTTGCATATGCACTA
EX893692       --> ATCGATTCTTGATCCTTAACC-TTGTATTGGCTGTCTTGCATATGCACTA
FD553579       --> ATCGATTCTTGATCCTTAACC-TTGTATTGGCTGTCTTGCATATGCACTA
EY926648       --> ATCGATTCTTGATCCTTA-CCGTTGTGTTGACTGTCTTG...........

               801    -    851
UN21528        --> CGAACCAAA-AGACTTGGTTGTCGCTCAAAGGAAGTCTTCCGACTAGGAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV551519       <-- CGAACCAAA-AGACTTGGTTGTCGCTCAAAGGAAGTCTTCCGACTAGGAC
FY444391       <-- CGAACCAAA-AGACTTGGTTGTCGCTCAAAGGAAGTCTTCCGACTAGGAC
FY444346       <-- CGAACCAAA-AGACTTGGTTGTCGCTCAAAGGAAGTCTTCCGACTAGGAC
FY452007       <-- CGAACCAAA-AGACTTGGTTGTCGCTCAAAGGAAGTCTTCCGACTAGGAC
EX890111       <-- CGAACCAAA-AGACTTGGTTCTCGCTCAAAGGAAGTCTTCCGACTAAGAC
FY446298       <-- ............ACTTGGT-GTCGCTCAAAGGAAGTCTTCCGACTAGGAC
FD939893       <-- ..................................................
EW714981       <-- ..................................................
EV546600       --> ..................................................
EX767075       --> ..................................................
EW719767       --> ..................................................
EY935914       --> CAAACCAAA-AGACTTGGTTGTCGTTCAAAGGAAATCTTCCGA.......
EW739306       --> ..................................................
FD935908       --> ..................................................
EX766849       --> CGAACCAAAGGGACTTGGTTGTCGCTCAAAGGAAGTCTTCCGACTAGGAC
EX893692       --> CGAACCAAA-AGACTTGGTTCTCGCTCAAAGGAAGTCTTCCGACTAAGAC
FD553579       --> CGAACCAAA-AGACTTGGTTGTCGCTC.......................
EY926648       --> ..................................................

               851    -    901
UN21528        --> GTTTCCTGTTTTCATCCTTAGAAGCTCATGTGGAAATCCGTGGCCGTTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV551519       <-- GTTTCCTGTTTTCATCCTTAGAAGCTCATGTGGAAATCCGTGGCCGTTTG
FY444391       <-- GTTTCCTGTTTTCATCCTTAGAAGCTCATGTGGAAATCCGTGGCCGTTTG
FY444346       <-- GTTTCCTGTTTTCATCCTTAGAAGCTCATGTGGAAATCCGTGGCCGTTTG
FY452007       <-- GTTTCCTGTTTTCATCCTTAGAAGCTCATGTGGAAATCCGTGGCCGTTTG
EX890111       <-- GTTTCCTGTTTTCATCCTTAGAAGCTCATGTGGAAATCCGTGGCCGTTTG
FY446298       <-- GTTTCCTGTTTTCATCCTTAGAAGCTCATGTGGAAATCCGTGGCCGTTTG
FD939893       <-- ..........................................GCCGTTTG
EW714981       <-- ..................................................
EV546600       --> ..................................................
EX767075       --> ..................................................
EW719767       --> ..................................................
EY935914       --> ..................................................
EW739306       --> ..................................................
FD935908       --> ..................................................
EX766849       --> GTTTCCTGTTTTCATCCTTAGAAGCTCGTGTGGAAATCCGTGGCCGTTTG
EX893692       --> GTTTCCTGTTTTCATCCTTAGAAGCTCATGTGGAA...............
FD553579       --> ..................................................
EY926648       --> ..................................................

               901    -    951
UN21528        --> GGTAATTAGTGAACCCTCTCACCGCACGACAGGCAAACGCCTTTTTAGGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV551519       <-- GGTAATTAGTGAACC...................................
FY444391       <-- GGTAATTAGTGAACCCTCTCACCGCACGACAGGCAAACGCCTTTTTAGGG
FY444346       <-- GGTAATTAGTGAACCCTCTCACCGCACGACAGGCAAACGCCTTTTTAGGG
FY452007       <-- GGTAATTAGTGAACCCTCTCACCGCACGACAGGCAAACGCCTTTTTAGGG
EX890111       <-- GGTAATTAGTGAACCCTCTCACCGCACGACAGGCAAACGCCTTTTTAGGG
FY446298       <-- GGTAATTAGTGAACCCTCTCACCGCACGACAGGCAAACGCCTTTTTAGGG
FD939893       <-- GGCAATTAGTGAACCCTCTCACCGCACGACAGGCAAACGCCTTTTTAGGG
EW714981       <-- ..................................................
EV546600       --> ..................................................
EX767075       --> ..................................................
EW719767       --> ..................................................
EY935914       --> ..................................................
EW739306       --> ..................................................
FD935908       --> ..................................................
EX766849       --> G.................................................
EX893692       --> ..................................................
FD553579       --> ..................................................
EY926648       --> ..................................................

               951    -   1001
UN21528        --> CCTAACCGCAGATAATCACTGACGATAGAATTTGCACCATCGCATCCAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV551519       <-- ..................................................
FY444391       <-- CCTAACCGCAGATAATCACTGACGATAGAATTTGCACCATCGCATCCAAT
FY444346       <-- CCTAACCGCAGATAATCACTGACGATAGAATTTGCACCATCGCATCCAAT
FY452007       <-- CCTAACCGCAGATAATCACTGACGATAGAATTTGCACCATCGCATCCAAT
EX890111       <-- CCTAATCGCAGATAATCACTGACGATAGAATTTGCACCATCGCATCCAAT
FY446298       <-- CCTAACCGCAGATAATCACTGACGATAGAATTTGCACCATTGCATCCAAT
FD939893       <-- CCTAATCGCAGATAATCACTGACGATAGAATTTGCACCATCGCATCCAAT
EW714981       <-- ..................................................
EV546600       --> ..................................................
EX767075       --> ..................................................
EW719767       --> ..................................................
EY935914       --> ..................................................
EW739306       --> ..................................................
FD935908       --> ..................................................
EX766849       --> ..................................................
EX893692       --> ..................................................
FD553579       --> ..................................................
EY926648       --> ..................................................

               1001   -   1051
UN21528        --> CAAGACCTTGGCTTTGATCGTATTTCCATTGGATAAGTGAACGACTGGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV551519       <-- ..................................................
FY444391       <-- CAAGACCTTGGCTTTGATCGTATTTCCATTGGATAAGTGAACGACTGGAA
FY444346       <-- CAAGACCTTGGCTTTGATCGTATTTCCATTGGATAAGTGAACGACTGGAA
FY452007       <-- CAAGACCTTGGCTTTGATCGTATTTCCATTGGATAAGTGAACGACTGGAA
EX890111       <-- CAAGACCTTGGCTTTGATCGTATTTCCATTGGATAAGTGAACGACTGGAA
FY446298       <-- CAAGACCTTGGCTTTGATCGTATTTCCATTGGATAAGTGAACGACTGGAA
FD939893       <-- CAAGACCTTGGCTTTGATCGTATTTCCATTGGATAAGTGAACGACTGGAA
EW714981       <-- ..................................................
EV546600       --> ..................................................
EX767075       --> ..................................................
EW719767       --> ..................................................
EY935914       --> ..................................................
EW739306       --> ..................................................
FD935908       --> ..................................................
EX766849       --> ..................................................
EX893692       --> ..................................................
FD553579       --> ..................................................
EY926648       --> ..................................................

               1051   -   1101
UN21528        --> ACGACGTAGTTTCGTCCTCTTGGATCGAAACAATTTGGGAACTGAACCGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV551519       <-- ..................................................
FY444391       <-- ACGACGTAGTTTCGTCCTCTTGGATCGAAACAATTTGGGAACTGAACCGG
FY444346       <-- ACGACGTAGTTTCGTCCTCTTGGATCGAAACAATTTGGGAACTGAACCGG
FY452007       <-- ACGACGTAGTTTCGTCCTCTTGGATCGAAACAATTTGGGAACTGAACCGG
EX890111       <-- ACGACGTAGTTTCGTCCTCTTGGATCGAAACAATTTGGGAACTGAACCGG
FY446298       <-- ACGACGTAGTTTCGTCCTCTTGGATCGAAACAATTTGGGAACTGAACCGG
FD939893       <-- ACGACGTAGTTTCGTCCTCTTGGATCGAAACAATTTGGGAACTGAACCGG
EW714981       <-- .....................GGATCGAAACAATTTGGGAACTGAACCGG
EV546600       --> ..................................................
EX767075       --> ..................................................
EW719767       --> ..................................................
EY935914       --> ..................................................
EW739306       --> ..................................................
FD935908       --> ..................................................
EX766849       --> ..................................................
EX893692       --> ..................................................
FD553579       --> ..................................................
EY926648       --> ..................................................

               1101   -   1151
UN21528        --> ATGGTTCCATCAGGGAGAGCATCGGCTAAGGCCTCAACAAGATCGTTCCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV551519       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FY444391       <-- ATGGTTCCATCAGGGAGAGCATCGGCTAAGGCCTCAACAAGATCGTTCCT  Raphanus sativus cv GSK3-1
FY444346       <-- ATGGTTCCATCAGGGAGAGCATCGGCTAAGGCCTCAACAAGATCGTTCCT  Raphanus sativus cv GSK3-1
FY452007       <-- ATGGTTCCATCAGGGAGAGCATCGGCTAAGGCCTCAACAAGATCGTTCCT  Raphanus sativus cv GSK3-1
EX890111       <-- ATGGTTCCATCAGGGAGAGCATCGGCCAAGGCCTCAACAAGATCGTTCCT  Raphanus sativus var. oleiformis
FY446298       <-- ATGGTTCCATCAGGGAGAGCATCGGCTAAGGCCTCAACAAGATCGTTCCT  Raphanus sativus cv GSK3-1
FD939893       <-- ATGGTTCCATCAGGGAGAGCATCGGCCAAGGCCTCAACAAGATCGTTCCT  Raphanus sativus var. oleiformis
EW714981       <-- ATGGTTCCATCAGGGAGAGCATCGGCCAAGGCCTCAACAAGATCGTTCCT  Raphanus sativus var. oleiformis
EV546600       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX767075       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EW719767       --> ..................................................  Raphanus sativus var. oleiformis
EY935914       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EW739306       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD935908       --> ..................................................  Raphanus sativus var. oleiformis
EX766849       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX893692       --> ..................................................  Raphanus sativus var. oleiformis
FD553579       --> ..................................................  Raphanus raphanistrum subsp. landra
EY926648       --> ..................................................  Raphanus sativus var. oleiformis

               1151   -   1201
UN21528        --> TCTAAGACAACGAGCTTCGTCCTTGATGTTTAAAACGAATTCTCGTTTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV551519       <-- ..................................................
FY444391       <-- TCTAAGACAACGAGCTTCGTCCTTGATGTTTAAAACGAATTCTCGTTTTT
FY444346       <-- TCTAAGACAACGAGCTTCGTCCTTGATGTTTAAAACGAATTCTCGTTTTT
FY452007       <-- TCTAAGACAACGAGCTTCGTCCTTGATGTTTAAAACGAATTCTCGTTTTT
EX890111       <-- TCTAAGACAACGAGCTTCGTCCTTGATGTTTAAAACGAATTCTCGTTTTT
FY446298       <-- TCTAAGACAACGAGCTTCGTCCTTGATGTTTAAAACGAATTCTCGTTTTT
FD939893       <-- TCTAAGACAACGAGCTTCGTCCTTGATGTTTAAAACGAATTCTCGTTTTT
EW714981       <-- TTTAAGACAACGAGCTTCGTCCTTGATGTTTAAAACGAATTCTCGTTTTT
EV546600       --> ..................................................
EX767075       --> ..................................................
EW719767       --> ..................................................
EY935914       --> ..................................................
EW739306       --> ..................................................
FD935908       --> ..................................................
EX766849       --> ..................................................
EX893692       --> ..................................................
FD553579       --> ..................................................
EY926648       --> ..................................................

               1201   -   1251
UN21528        --> T-CTTCCCATCTTCAATCAACATGGTCCGTGCTTTGTGAATAAGATTAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV551519       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FY444391       <-- T-CTTCCCATCTTCAATCAACATGGTCCGTGCTTTGTGAATAAGATTAGA  Raphanus sativus cv GSK3-1
FY444346       <-- T-CTTCCCATCTTCAATCAACATGGTCCGTGCTTTGTGAATAAGATTAGA  Raphanus sativus cv GSK3-1
FY452007       <-- TTCTTCCCATCTTCAATCAACATGGTCCGTGCTTTGTGAATAAGATTAGA  Raphanus sativus cv GSK3-1
EX890111       <-- T-CTTCCCATCCTCAATCAACATGGTCCGTGCTTTGTGAATAAGATTAGA  Raphanus sativus var. oleiformis
FY446298       <-- T-CTTCCCATCTTCAATCAACATGGTCCGTGCTTTGTGAATAAGATTAGA  Raphanus sativus cv GSK3-1
FD939893       <-- T-CTTCCCATCCTCAATCAACATGGTCCGTGCTTTGTGAATAAGATTAGA  Raphanus sativus var. oleiformis
EW714981       <-- T-CTTCCCATCCTCAATCAACATGGTCCGTGCTTTGTGAGTAAGATTAGA  Raphanus sativus var. oleiformis
EV546600       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX767075       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EW719767       --> ..................................................  Raphanus sativus var. oleiformis
EY935914       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EW739306       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD935908       --> ..................................................  Raphanus sativus var. oleiformis
EX766849       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX893692       --> ..................................................  Raphanus sativus var. oleiformis
FD553579       --> ..................................................  Raphanus raphanistrum subsp. landra
EY926648       --> ..................................................  Raphanus sativus var. oleiformis

               1251   -   1301
UN21528        --> AGTGAGACGAAGACGATCAGAGACGCCAAGCTGATCAAGAGCTCTCCAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV551519       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FY444391       <-- AGTGAGACGAAGACGATCAGAGACGCCAAGCTGATCAAGAGCTCTCCAAC  Raphanus sativus cv GSK3-1
FY444346       <-- AGTGAGACGAAGACGATCAGAGACGCCAAGCTGATCAAGAGCTCTCCAAC  Raphanus sativus cv GSK3-1
FY452007       <-- AGTGAGACGAAGACGATCAGAGACGCCAAGCTGATCAAGAGCTCTCCAAC  Raphanus sativus cv GSK3-1
EX890111       <-- AGTGAGACGAAGACGATCAGAGACGCCAAGCTGATCAAGAGCTCTCCAGC  Raphanus sativus var. oleiformis
FY446298       <-- AGTGAGACGAAGACGATCAGAGACGCCAAGCTGATCAAGAGCTCTCCAAC  Raphanus sativus cv GSK3-1
FD939893       <-- AGTGAGACGAAGACGATCAGAGACGCCAAGCTGATCAAGAGCTCTCCAGC  Raphanus sativus var. oleiformis
EW714981       <-- AGTGAGACGAAGACGATCAGAGACGCCAAGCTGATCAAGAGCTCTCCAGC  Raphanus sativus var. oleiformis
EV546600       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX767075       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EW719767       --> ..................................................  Raphanus sativus var. oleiformis
EY935914       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EW739306       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD935908       --> ..................................................  Raphanus sativus var. oleiformis
EX766849       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX893692       --> ..................................................  Raphanus sativus var. oleiformis
FD553579       --> ..................................................  Raphanus raphanistrum subsp. landra
EY926648       --> ..................................................  Raphanus sativus var. oleiformis

               1301   -   1351
UN21528        --> CATTAGTAAGAGTTCCAATTCCAGCTCCTTCCGACCTCACTTTCTCGGCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV551519       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FY444391       <-- CATTAGTAAGAGTTCCAATTCCAGCTCCTTCCGACCTCACTTTCTCGGCT  Raphanus sativus cv GSK3-1
FY444346       <-- CATTAGTAAGAGTTCCAATTCCAGCTCCTTCCGACCTCACTTTCTCGGCT  Raphanus sativus cv GSK3-1
FY452007       <-- CATTAGTAAGAGTTCCAATTCCAGCTCCTTCCGACCTCACTTTCTCGGCT  Raphanus sativus cv GSK3-1
EX890111       <-- CATTAGTAAGAGTTCCAATTCCAGCTCCTTCCGACCTCACTTTATCTGCT  Raphanus sativus var. oleiformis
FY446298       <-- CATTAGTAAGAGTTCCAATTCCAGCTCCTTCCGACCTCACTTTCTCGGCT  Raphanus sativus cv GSK3-1
FD939893       <-- CATTAGTAAGAGTTCCAATTCCAGCTCCCTCCGACCTCACTTTATCTGCT  Raphanus sativus var. oleiformis
EW714981       <-- CATTAGTAAGAGTTCCAATTCCAGCTCCTTCCGACCTCACTTTATCTGCT  Raphanus sativus var. oleiformis
EV546600       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX767075       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EW719767       --> ..................................................  Raphanus sativus var. oleiformis
EY935914       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EW739306       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD935908       --> ..................................................  Raphanus sativus var. oleiformis
EX766849       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX893692       --> ..................................................  Raphanus sativus var. oleiformis
FD553579       --> ..................................................  Raphanus raphanistrum subsp. landra
EY926648       --> ..................................................  Raphanus sativus var. oleiformis

               1351   -   1401
UN21528        --> CTCTCCAACACAACACTCTTTATTCCTTTCCTATGAAGAGCAAGGGAAGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV551519       <-- ..................................................
FY444391       <-- CTCTCCAACACAACACTCTTTATTCCTTTCCTATGAAGAGCAAGGGAAGT
FY444346       <-- CTCTCCAACACAACACTCTTTATTCCTTTCCTATGAAGAGCAAGGGAAGT
FY452007       <-- CTCTCCAACACAACACTCTTTATTCCTTTCCTATGAAGAGCAAGGGAAGT
EX890111       <-- CTCTCCAACACAACACTCTTTATTCCTTTCCTATGAAGAGCAAGAGAAGT
FY446298       <-- CTCTCCAACACAACACTCTTTATTCCTTTCCTATGAAGAGCAAGGGAAGT
FD939893       <-- CTCTCCAACACAACACTCTTTATTCCTTTCCTATGAAGAGCAAGAGAAGT
EW714981       <-- ..................................................
EV546600       --> ..................................................
EX767075       --> ..................................................
EW719767       --> ..................................................
EY935914       --> ..................................................
EW739306       --> ..................................................
FD935908       --> ..................................................
EX766849       --> ..................................................
EX893692       --> ..................................................
FD553579       --> ..................................................
EY926648       --> ..................................................

               1401   -   1451
UN21528        --> GGCGAGACCAGCGATTCCGCCGCCGACGATAACTATTCCGACTTCTTCCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV551519       <-- ..................................................
FY444391       <-- GGCGAGACCAGCGATTCCGCCGCCGACGATAACTATACGGACTTCTTCCA
FY444346       <-- GGCGAGACCAGCGATTCCGCCGCCGACGATAACTATTCCGACTTCTTCCA
FY452007       <-- GGCGAGACCAGCGATTCCGCCGCCGACGATAACTATTCCGACTTCTTCCA
EX890111       <-- GGCGAGACCAGCGATTCCGCCGCCAACGATAACTATTCCGACTTCTTCCA
FY446298       <-- GGCGAGACCAGCGATTCCGCCGCCGACGATAACTATTCCGACTTCTTCCA
FD939893       <-- GGCGAGACCAGCGATTCCGCCGCCAACGATAACTATTCCGACTTCTTCCA
EW714981       <-- ..................................................
EV546600       --> ..................................................
EX767075       --> ..................................................
EW719767       --> ..................................................
EY935914       --> ..................................................
EW739306       --> ..................................................
FD935908       --> ..................................................
EX766849       --> ..................................................
EX893692       --> ..................................................
FD553579       --> ..................................................
EY926648       --> ..................................................

               1451   -   1501
UN21528        --> TTTTTATTTCTAATTTAAAGCTGAGATATTCAGATCTGGAGTTTAGTTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV551519       <-- ..................................................
FY444391       <-- TTTTTATTTCTAATT-AAAGCTGAG.........................
FY444346       <-- TTTTTATTTCTAATT-AAAGCTGAGA........................
FY452007       <-- TTTTTATTTCTAATTTAAAGCTGAGATATTCAGAT...............
EX890111       <-- TTTTTATTTCTAATTTAAAGCTGAGATATTCAGATCTGGAGTTTAGTTTG
FY446298       <-- TTTTTATT-CTAATTTAAAGCTGAGA........................
FD939893       <-- TTTTTATTTCTAATTTAAAGCTGAGATATTCAGATCTGGAGTTTAGTTTG
EW714981       <-- ..................................................
EV546600       --> ..................................................
EX767075       --> ..................................................
EW719767       --> ..................................................
EY935914       --> ..................................................
EW739306       --> ..................................................
FD935908       --> ..................................................
EX766849       --> ..................................................
EX893692       --> ..................................................
FD553579       --> ..................................................
EY926648       --> ..................................................

               1501   -   1551
UN21528        --> GGTACTTGTTATCC
                   ~~~~~~~~~~~~~~
EV551519       <-- ..............
FY444391       <-- ..............
FY444346       <-- ..............
FY452007       <-- ..............
EX890111       <-- GGTACTTGTTATCC
FY446298       <-- ..............
FD939893       <-- GGTACTTGTTATCC
EW714981       <-- ..............
EV546600       --> ..............
EX767075       --> ..............
EW719767       --> ..............
EY935914       --> ..............
EW739306       --> ..............
FD935908       --> ..............
EX766849       --> ..............
EX893692       --> ..............
FD553579       --> ..............
EY926648       --> ..............