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Alignment for radish unigene UN21537

               1      -     51
UN21537        --> AGTTGGTTCTTGGTTCATCATAGATCTATGCTAACAAAGATTGTCAAAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD989787       <-- ..................................................
EY917162       <-- ..................................................
EV538704       <-- ..................................................
FD552285       <-- ..................................................
EX749734       <-- ..................................................
FD568985       <-- ..................................................
EX764008       <-- ..................................................
EY940699       <-- ..................................................
EY912721       --> AGTTGGTTCTTGGTTCATCATAGATCTATGCTAACAAAGATTGTCAAAAC
EV542653       --> .........................................cGTCAAAAC
EY936422       --> ..................................................
EX753348       --> ..................................................
FD985533       --> ..................................................

               51     -    101
UN21537        --> ATTCCACGTTCTTAATCATATGTAAGAACAGCAAATTCATGTCATTATAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD989787       <-- ..................................................
EY917162       <-- ..................................................
EV538704       <-- ..................................................
FD552285       <-- ..................................................
EX749734       <-- ..................................................
FD568985       <-- ..................................................
EX764008       <-- ..................................................
EY940699       <-- ..................................................
EY912721       --> ATTCCACGTTCTTA-TCATATGTAAGAACAGCAAATTCATGTCATCATAT
EV542653       --> ATTCCACGTTCTTAATCATATGTAAGAACAGCAAATTCATGTCATCATAT
EY936422       --> .............AATCACATGTAAGAACAGCAAATTCATGTCATTATAT
EX753348       --> ..........................AACAGCAAATTCATGTCATTATAT
FD985533       --> ..........................gACAGCAAATTCATGTCATTATAT

               101    -    151
UN21537        --> AGAACAATAA--TACATCAGCTCAACGGACCACACCAGAAACAGTTCTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD989787       <-- ..................................................
EY917162       <-- ..................................................
EV538704       <-- ..................................................
FD552285       <-- ..................................................
EX749734       <-- ..................................................
FD568985       <-- ..................................................
EX764008       <-- ..................................................
EY940699       <-- ..................................................
EY912721       --> AGAACAATAA--TACATCAGCTCAACGGACCACACCAGAAACAGTTCTTC
EV542653       --> AGAACAATAA--TACATCAGCTCAACGGACCACACCAGAAACAGTTCTTC
EY936422       --> AGAACCATAAAATACATCAGCTCAACGGACCACACCAGAAACAGTTCTTC
EX753348       --> AGAACCATAA--TACATCAGCTCAACGGACCACACCAAAAACAGTTCTTC
FD985533       --> AGAACCATAA--TACATCAGCTCAACGGACCACACCAGAAACAGTT--TC

               151    -    201
UN21537        --> TGCAACCAAAAAAAAAAACAAGTATCAAACAAAGCAAAAGATTAAATCTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD989787       <-- ..................................................
EY917162       <-- ..................................................
EV538704       <-- ..................................................
FD552285       <-- ..................................................
EX749734       <-- ..................................................
FD568985       <-- ..................................................
EX764008       <-- ..................................................
EY940699       <-- ..................................................
EY912721       --> TGCAACCAAAAAAAAAAACAAGTATCAAACAAAGCAAAAGATTAAATCTC
EV542653       --> TGCAACCAAAAAAAAAAACAAGTATCAAACAAAGCAAAAGATTAAATCTC
EY936422       --> TGCAACCAAAAAAAAAA-CAAGTATCAAACAAAGCAAAAGATTAAATCTC
EX753348       --> TGCAACCAAAAAAAAAAACAAGTATCAAACAAAGCAAAAGATTAAATCTC
FD985533       --> TGCAACCAAAAAAAAAA-CAAGTATCAAACAAAGCAAAAGATTAAATCTC

               201    -    251
UN21537        --> TCTCTCT--TTCTCTCTTTGTCTGTGTG--GAAGAACTTTCATGAACTAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD989787       <-- ..................................................
EY917162       <-- ..................................................
EV538704       <-- ..................................................
FD552285       <-- ..................................................
EX749734       <-- ..................................................
FD568985       <-- ..................................................
EX764008       <-- ..................................................
EY940699       <-- ..................................................
EY912721       --> TCTCTCT--TTCTCTCTTTGTCTGTGTG--GAAGAACTTTCATGAACTAG
EV542653       --> TCTCTCT--TTCTCTCTTTGTCTGTGTGTGGAAGAACTTTCATGAACTAG
EY936422       --> TCTCT----TTCTCTCTTTGTCTGTGTG--GAAGAACTTTCATGAACTAG
EX753348       --> TCTCTCT--TTCTCTCTTTGTCTGTGTG--GAAAAACTTTCATGAACTAA
FD985533       --> TCTCTCTCTTTCTCTCTTTGTCTGTGTG--GAAGAACTTTCATGAGCTAG

               251    -    301
UN21537        --> AGCAAAGCAAGCTGCTGGATATCATAAGGGTGAGCATCAGATGGAGATTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD989787       <-- ..................................................
EY917162       <-- ..................................................
EV538704       <-- ..................................................
FD552285       <-- ..................................................
EX749734       <-- ..................................................
FD568985       <-- ..................................................
EX764008       <-- ..................................................
EY940699       <-- ..................................................
EY912721       --> AGCAAAGCAAGCTGCTGGATATCATAAGGGTGAGCATCAGATGGAGATTC
EV542653       --> AGCAAAGCAAGCTGCTGGATATCATAAGGGTGAGCATCAGATGGAGATTC
EY936422       --> AGCATAGCAAGCTGCTGGATACCATAAGGGTGAGCATCAGATGGAGATTC
EX753348       --> AGCATAGCAAGCTGCTGGATATCATAAGGGTGAGCATCAAATGGAGATTC
FD985533       --> AGCAAAGCAAGCTGCTGGATATCATAAGGGTGAGCATCAGATGGAGATTC

               301    -    351
UN21537        --> TCTCCTAAAAGATCGACTACCGATCACGACATTCGCTGCTTCCCCTGGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD989787       <-- ........................CACGATATTAGCTGCTTCCCCTGGAT
EY917162       <-- .........................................CCCCTGGAT
EV538704       <-- ..................................................
FD552285       <-- ..................................................
EX749734       <-- ..................................................
FD568985       <-- ..................................................
EX764008       <-- ..................................................
EY940699       <-- ..................................................
EY912721       --> TCTCCTAAAAGATCGACTACCGATCACGACATTCGCTGCTTCCCCTGGAT
EV542653       --> TCTCATAAAAGATCGACTACCGATCACGACATTCGCTGCTTCCCCTGGAT
EY936422       --> TCTCCTAAAAAATCGACTACCGATCACGACATTCGCTGCTTCCCCTGGAT
EX753348       --> TCTCCTAAAAGATCGACTACCGATCACGACATTCGCTGCTTCCCCTGGAT
FD985533       --> TCTCCTAAA-GATCGACTACCGATCACGATATTAGCTGCTTCCCCTGGAT

               351    -    401
UN21537        --> GAAACGCATCCCAGAACACAAACTCATCTCTGTTCAGACAAGGAGCTTGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD989787       <-- GAAACGCATCCCAGAACACAAACTCATCTCTGT-CAGACAAGGAGCTTGA  Raphanus raphanistrum subsp. landra
EY917162       <-- GAAACGCATCCCAGAACACAAACTCATCTCTGTTCAGACATGGAGCTTGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV538704       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD552285       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX749734       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD568985       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EX764008       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY940699       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY912721       --> GAAACGCATCCCAGAACACAAACTCATCTCTGTTCAGACATGGAGCTTGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV542653       --> GAAACGCATCCCAAAACACAAACTCATCTCTGTTCAGACATGGAGCTTGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY936422       --> GAAACGCATCCCAAAACACAAACTCATCTCTGTTCAGACAAGGAGCTTGA  Raphanus sativus cv Early Scarlet Globe
EX753348       --> GAAACGCATCCCAAAACACAAACTCATCTCTGTTCAAACAAGGAGCTTGA  Raphanus raphanistrum subsp. maritimus
FD985533       --> GAAACGCATCCCAGAACACAAACTCATCTCTGTTCAGACAAGGAGCTTGA  Raphanus raphanistrum subsp. landra

               401    -    451
UN21537        --> CCTGGAAGACAAGTTATCTGTCCATTGTTCCTCCCAACTCCACAACACCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD989787       <-- C-TGGAAGACAAGTTATCTGTCCATTGTTCCTCCCAACTCCACAACACCC
EY917162       <-- CCTGGAAGACAAGTTATCTGTCCATTGTTCCTCCCAACTCCACAACACCC
EV538704       <-- ..................................................
FD552285       <-- ..................................................
EX749734       <-- ..................................................
FD568985       <-- ..................................................
EX764008       <-- ..................................................
EY940699       <-- ..................................................
EY912721       --> CCTGGAAGACAAGTTATCTGTCCATTGTTCCTCCCAACTCCACAACACCC
EV542653       --> CCTGGAAGACGAGTTATCTGTCCATTGTTCCTCCCAACTCCACAACACCC
EY936422       --> CCTGGAAGACAAGTTATCTGTCCATTGTTCCTCCCAACTCCACAACACCC
EX753348       --> CCTGGAAAACAAGTTATCTGTCCATTGTTCCTCCCAACTCCACAACACCC
FD985533       --> CCTGGAAGACAAGTTATCTGTCCATTGTTCCTCCCAACTCCACAACACCC

               451    -    501
UN21537        --> CGCGTTTGTCACCCTAAACCCATAGCGAGAAGGATTAGCTACCATGTCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD989787       <-- CGCGTTTGTCACCCTAAACCCATAGCGAGAAGGATTAGCTACCATGTCCT  Raphanus raphanistrum subsp. landra
EY917162       <-- CGCGTTTGTCACCCTAAACCCATAGCGAGAAGGATTAGCTACCATGTCTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EV538704       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD552285       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX749734       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD568985       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EX764008       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY940699       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY912721       --> CGCGTTTGTCACCCTAAACCCATAGCGAGAAGGATTAGCTACCATGTCTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EV542653       --> CGCGTTTGTCACCCTAAACCCATAGCGAGAAGGATTAGCTACCATGTCCT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY936422       --> CGCGTTTGTCACCCTAAACCCATAGCGAGAAGGATTAGCTACCATGTCTT  Raphanus sativus cv Early Scarlet Globe
EX753348       --> CGCGTTTGTCACCCTAAACCCATAGCGAGAAGGATTAGCTACCATGTCTT  Raphanus raphanistrum subsp. maritimus
FD985533       --> CGCGTTTGTCACCCTAAACCCATAGCGAGAAGGATTAGCTACCATGTCCT  Raphanus raphanistrum subsp. landra

               501    -    551
UN21537        --> GGAAGATACCATAAGCATTGATGTAAGTGAACTTAGCATCCGGTGTGTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD989787       <-- GGAAGATACCATAAGCATTGATGTAAGTGAACTTAGCATCCGGTGTGTTT
EY917162       <-- GGAAGATACCATAAGCATTGATGTAAGTGAACTTAGCATCCGGTGTGTTT
EV538704       <-- ..................................................
FD552285       <-- ..................................................
EX749734       <-- ..................................................
FD568985       <-- ..................................................
EX764008       <-- ..................................................
EY940699       <-- ..................................................
EY912721       --> GGAAGATACCATAAGCATTGATGTAAGTGAACTTAGCATCCGGTGTGTTT
EV542653       --> GGAAGATACCATAAGCATTGATGTAAGTGAACTTAGCATCCGGTGTGTTT
EY936422       --> GGAAGATACCGTAAGCATTGATGTAAGTGAACTTAGCATCCGGTGTGTTT
EX753348       --> GGAAGATACCATAAGCATTGATGTAAGTGAACTTAGCATCTGGTGTGTTT
FD985533       --> GGAAGATACCATAAGCATTGATGTAAGTGAACTTAGCATCCGGTGTGTTT

               551    -    601
UN21537        --> TGGTTGAAATAGTCGACCAGAGACACGAGCTTGCTGTTAAAGATCCTGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD989787       <-- TGGTTGAAATAGTCGACCAGAGACACGAGCTTGCTGTTAAAGATCCTGTT
EY917162       <-- TGGTTGAAATAGTCGACCAGAGACACGAGCTTGCTGTTAAAGATCCTGTT
EV538704       <-- ..................................................
FD552285       <-- ..................................................
EX749734       <-- ..................................................
FD568985       <-- ..................................................
EX764008       <-- ..................................................
EY940699       <-- ..................................................
EY912721       --> TGGTTGAAATAGTCGACCAGAGACACGAGCTTGCTGTTAAAGATCCTGTT
EV542653       --> TGGTTGAAATAGTCGACCAGAGACACGAGCTTGCTGTTAAAGATCCTGTT
EY936422       --> TGGTTGAAATAGTCGACCAGAGACACGAGCTTGTTGTTGAAGATCCTGTT
EX753348       --> TGGTTGAAATAGTCGACCA...............................
FD985533       --> TGGTTGAAATAGTCGACCAGAGACACGAGCTTGCTGTTAAAGATCCTGTT

               601    -    651
UN21537        --> TGCTGAATTGATCCTTTCGTCACATGTCCTCCCGTCTCTGCTGTTCTGCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD989787       <-- TGCTGAATTGATCCTTTCGTCACATGTCCTCCCGTCTCTGCTGTTCTGCG
EY917162       <-- TGCTGAATTGATCCTTTCGTCACATGTCCTCCCGTCTCTGCTGTTCTGCG
EV538704       <-- ...................................CTCTGCTGTTCTGCG
FD552285       <-- ..................................................
EX749734       <-- ..................................................
FD568985       <-- ..................................................
EX764008       <-- ..................................................
EY940699       <-- ..................................................
EY912721       --> TGCTGAATTGATCCTTTCGTCACATGTCCTCCCGTCTCTGCTGTTCTGCG
EV542653       --> TGCTGAATTGATCCTTTCGTCACATGTCCTCCCGTCTCTGCTGTTCTGCG
EY936422       --> TGCTGAATTGATCCTTTCGTCACATGTCCTCCCGTCTCTGCTGTTCTGCG
EX753348       --> ..................................................
FD985533       --> TGCTGAATTGATCCTTTCGTCACATGTCCTCCCGTCTCTGCTGTTCTGCG

               651    -    701
UN21537        --> CCAGCTCGTTAGGGCTACATCCTATTGCACCGATACCAATTAGCGCAAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD989787       <-- CCAGCTCGTTAGGGCTACATCCTATTGCACCGATACCAATTAGCACAAAC
EY917162       <-- CCAGCTCGTTAGGGCTACATCCTATTGCACCGATACCAATTAGCGCAAAC
EV538704       <-- CCAGCTCGTTAGGGCTACATCCTATTGCACCGATACCAATTAGCGCAAAC
FD552285       <-- ..................................ACCAATTAGCGCAA-C
EX749734       <-- ..................................................
FD568985       <-- ..................................................
EX764008       <-- ..................................................
EY940699       <-- ..................................................
EY912721       --> CCAGCTCGTTAGGGCTACATCCTATTGCACCGATACCAATTAGCGCAAAC
EV542653       --> CCAGCTCGTTAGGGCTACATCCTATTGCACCGATACCAATTAGCGCAAAC
EY936422       --> CCAGCTCGTTAGGGCTACATCCTATTGCACCGATACCAATTAGCGCAAAC
EX753348       --> ..................................................
FD985533       --> CCAGCTCGTTAGGGCTACATCCTATTGCACCGATACCAATTAGCACAAAC

               701    -    751
UN21537        --> TTCCTCGCTCCGTTGTTATACAATATCCTGAGTTGCTCGGTGTATCGGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD989787       <-- TTCCTCGCTCCGTTGTTATACAATATCCTGAGTTGTTCGGTGTATCGTTT
EY917162       <-- TTCCTCGCTCCGTTGTTATACAATATCCTGAGTTGCTCGGTGTATCGGTT
EV538704       <-- TTCCTCGCTCCGTTGTTATACAATATCCTGAGTTGCTCTGTGTATCGGTT
FD552285       <-- TTCCTCGCTC-GTTGTTATACAATATCCTGAGT-GCTCGGTGTATCGGTT
EX749734       <-- ..................TACAATATC-TGAGT-GTTCGGTGTATCGGTT
FD568985       <-- .............................GAGTTGCTCGGTGTATCGGTT
EX764008       <-- ...............................GTTGCTCGGTGTATCGGTT
EY940699       <-- ...............................GTTGCTCGGTGTATCGGTT
EY912721       --> TTCCTCGCTCCGTTGTTATACAATATCCTGAGTTGCTCGGTGTAT.....
EV542653       --> TTCCTCGCTCCGTTGTTATACAATATCCTGAGTTGCTCTGTGTATCGGTT
EY936422       --> TTCCTCGCTCCGTTGTTATACAATATCCTGAGTTGCTCGGTGTATCGGTT
EX753348       --> ..................................................
FD985533       --> TTCCTCGCTCCGTTGTTATACAATATCCTGAGTTGTTCGGTGTATCGTTT

               751    -    801
UN21537        --> GATGAGGTCGTTGGCAAAGGAGTCTGGGGAGTACTGGTTCCCAGTGGAGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD989787       <-- GATGAGGTCGTTGGCAAAGGAGTCTGGGGAGTACTGGTTTCCAGTGGAGT
EY917162       <-- GATGAGGTCATTGGCAAAGGAGTCTGGGGAGTATTGGTTCCCAGTGGAGT
EV538704       <-- GATGAGGTCATTGGCAAAGGAGTCTGGGGAGTACTGGTTCCCAGTGGAGT
FD552285       <-- GATGGGGTCGTTGGCAAAGGAGTCCGGGGAGTACTGGTTACCAGTGGAGT
EX749734       <-- GATGAGGTCGTTGGCAAAGGAGTCTGGGGAGTACTGGTTCCCAGTGGAGT
FD568985       <-- GATGAGGTCGTTGGCAAAGGAGTCTGGGGAGTACTG-CTCCCAGTGGGGT
EX764008       <-- GATGAGGTCGTTGGCAAAGGAGTCCGGGGAGTACTGGTTACCAGTGGAGT
EY940699       <-- GATGAGGTCGT-GGCAAAGGAGTCTGGGGAGTACTGGTTCCCAGTGGAGT
EY912721       --> ..................................................
EV542653       --> GATGAGGTCATTGGCAAAGGAGTCTGGGGAGTACTGGTTCCCAGTGGAGT
EY936422       --> G.................................................
EX753348       --> ..................................................
FD985533       --> GATGAGGTCGTTGGCAAAGGAGTCTGGGGAGTACTGGTTTCCAGTGGAGT

               801    -    851
UN21537        --> AATAGAGAGGCATAAAGTAGTTATTGAGATAGTCGTTACTGCCTAACCCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD989787       <-- AATAGAGAGGCATAAAGTAGTTATTGAGATAGTCGTTACTGCCTAACCCT
EY917162       <-- AATAGAGAGGCATAAAGTAc..............................
EV538704       <-- AATAGAGAGGCATAAAGTAGTTATTGAGATAGTCGTTACTGCCTAACCCT
FD552285       <-- AATAGAGAGGCATAAAGTAGTTATTGAGATAGTCGTTACTGCCTAACCCT
EX749734       <-- AATAGAGAGGCATAAAGTAGTTATTGAGATAATCGTTACTGCCTAACCCT
FD568985       <-- AATAGAGAGGCATAAAGTAGTTGTTGAGATAGTCGTTACTGCCTAACCCT
EX764008       <-- AATAGAGAGGCATAAAGTAGTTATTGAGATAGTCGTTACTGCCTAACCCT
EY940699       <-- AATAGAGAGGCATAAAGTAGTTGTTGAGATAGTCGTTACTGCCTAACCCT
EY912721       --> ..................................................
EV542653       --> AATAGAGAGGCATAAAGTAGTTATTGAGATAGTCGTTACTGCCTAACCCT
EY936422       --> ..................................................
EX753348       --> ..................................................
FD985533       --> AATAGAGAGGCATAAAGTAGTTATTGAGATAGTCGTTACTGCCTAACCCT

               851    -    901
UN21537        --> ATAGAGTAGATGCATTTACTTAGGTAATTAGCAGCTTCATTCTCGTCTCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD989787       <-- ATAGAGTAGATGCATTTACTTAGGTAATTAGCAGCTTCATTCTCGTCTCC
EY917162       <-- ..................................................
EV538704       <-- ATAGAGTAGATGCATTTACTTAGGTAATTAGCAGCTTCATTCTCATCACC
FD552285       <-- ATAGAGTAGATGCATTTACTTAGGTAATTAGCAGCTTCATTCTCGTCTCC
EX749734       <-- ATAGAGTAGATGCATTTACTTAGGTAATTAGCAGCTTCGTTCTCGTCTCC
FD568985       <-- ATAGAGTAGATGCATTTACTTAGGTAATTAGCAGCTTCATTCTCGTCTCC
EX764008       <-- ATAGAGTAGATGCATTTACTTAGGTAATTAGCAGCTTCATTCTCGTCTCC
EY940699       <-- ATAGAGTAGATGCATTTACTTAGGTAATTAGCAGCTTCATTCTCGTCTCC
EY912721       --> ..................................................
EV542653       --> ATAGAGTAGATGCATTTACTT.............................
EY936422       --> ..................................................
EX753348       --> ..................................................
FD985533       --> ATAGAGTAGATGCATTT.................................

               901    -    951
UN21537        --> GAGTATGTTCACCACTTGTGACACTGTGTTCACGTGGTTAGCTACTTGCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD989787       <-- GAGTATGTTCACCACTTGTGACACTGTGTTCACGTGATTAGCTACTTGCC  Raphanus raphanistrum subsp. landra
EY917162       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV538704       <-- GAGTATGTTCACCACTTGTGACACTGTGTTCACGTGGTTAGCTACTTGCC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD552285       <-- GAGTATGTTCACCACTTGTGACACTGTGTTCACGTGATTAGCTACTTGCC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX749734       <-- GAGTATGTTCACCACTTGTGACACTGTGTTCACGTGGTTAGCTACTTGCC  Raphanus raphanistrum subsp. maritimus
FD568985       <-- GAGTATGTTCACCACTTGTGGCACTGTGTTCACGTGGTTAGCTACTTGCC  Raphanus sativus cv Early Scarlet Globe
EX764008       <-- GAGTATGTTCACCACTTGTGACACTGTGTTCACGTGATTAGCTACTTGCC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY940699       <-- GAGTATGTTCACCACTTGTGACACTGTGTTCACGTGGTTAGCTACTTGCC  Raphanus sativus cv Early Scarlet Globe
EY912721       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV542653       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY936422       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EX753348       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD985533       --> ..................................................  Raphanus raphanistrum subsp. landra

               951    -   1001
UN21537        --> CTGCAAACGTTATTCTAGCTCCCAACTGACGACCAGTTTCTTCTCGAACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD989787       <-- CTGCAAACGTTATTCTAGCTCCCAGCTGACGACCGGTTTCTTCTCGAACA
EY917162       <-- ..................................................
EV538704       <-- CTGCAAACGTTATTCTAGCTCCCAGCTGACGACCGGTTTCTTCTCGAACA
FD552285       <-- CCGCAAAAGTTATTCTAGCTCCCAACTGGCGACCAGTTTCTTCTCGAACA
EX749734       <-- CTGCAAACGTTATTCTAGCTCCCAGCTGACGACCGGTTTCTTCTCGAACA
FD568985       <-- CTGCAAAAGTTATTCTAGCTCCCAACTGACGACCAGTTTCTTCTCGAACA
EX764008       <-- CCGCAAAGGTTATTCTAGCTCCCAACTGGCGACCAGTTTCTTCTCGAACA
EY940699       <-- CTGCAAAAGTTGTTCTAGCTTCCAACTGGCGACCAGTTTCTTCTCGAACA
EY912721       --> ..................................................
EV542653       --> ..................................................
EY936422       --> ..................................................
EX753348       --> ..................................................
FD985533       --> ..................................................

               1001   -   1051
UN21537        --> CCAGCAGCTGCAGAAGCGTAGTTTACTCCTCTTAGGATGTCTTCTCCGCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD989787       <-- CCAGCAGCTGCAGAAGCGTAGTTTACTCCTCTTAGGATGTCTTCTCCc..
EY917162       <-- ..................................................
EV538704       <-- CCAGCAGCTGCAGAAGCGTAGTTTACTCCTCTTAGAATGTCTTCTCCGCT
FD552285       <-- CCAGCAGCTGCAGAAGCGTAGTTTACTCCTCTTAGGATGTCTTCTCCGCT
EX749734       <-- CCAGCAGCTGCAGAAGCGTAGTTTACTCCTCTTAGGATGTCTTCTCCGCT
FD568985       <-- CCAGCAGCTGCAGAAGCGTAGTTTACTCCTCTTAGGATGTCTTCGCCGCT
EX764008       <-- CCAGCAGCTGCAGAAGCGTAGTTTACTCCTCTTAGGATGTCTTCTCCGCT
EY940699       <-- CCAGCAGCTGCAGAAGCGTAGTTTACTCCTCTTAGGATGTCTTCGCCGCT
EY912721       --> ..................................................
EV542653       --> ..................................................
EY936422       --> ..................................................
EX753348       --> ..................................................
FD985533       --> ..................................................

               1051   -   1101
UN21537        --> TGCTTGAGAGTATGGTGTAATGTAGTCATCGAAACCAAGAAGCTCGGTGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD989787       <-- ..................................................
EY917162       <-- ..................................................
EV538704       <-- TGCTTGAGAGTATGGTGTAATGTAGTCATCGAAACCAAGAAGCTCGGTGA
FD552285       <-- TGCTTGAGAGTATGGTGTAATGTAGTCATCGAAACCAAGAAGCTCGGTGA
EX749734       <-- TGCTTGAGAGTATGGTGTAATGTAGTCATCGAAACCAAGAAGCTCGGTGA
FD568985       <-- TGCTTGAGAATACGGTGTAATGTAGTCATCGAAACCAAGAAGCTCAGTGA
EX764008       <-- TGCTTGAGAGTATGGTGTAATGTAGTCATCGAAACCAAGAAGCTCGGTGA
EY940699       <-- TGCTTGGGAATACGGTGTAATGTAGTCATCGAAACCAAGAAGCTCAGTGA
EY912721       --> ..................................................
EV542653       --> ..................................................
EY936422       --> ..................................................
EX753348       --> ..................................................
FD985533       --> ..................................................

               1101   -   1151
UN21537        --> TGACATCTACGGTTGTTTTTCCATTACAGAACCTTCCGGTTGGACCAAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD989787       <-- ..................................................
EY917162       <-- ..................................................
EV538704       <-- TGACATCTACGGTTGTTTTTCCATTACAGAACCTTCCGGTTGGACCAAAC
FD552285       <-- TGACATCGACGGTTGTTTTTCCATTACAGAACCTTCCGGTTGGACCAAAC
EX749734       <-- TGACATCTACGGTTGTTTTTCCATTACAGAACCTTCTGGTTGGGCCAAAC
FD568985       <-- TGACATCTACGGTTGTTTTTCCATTACAGAACCTTCCGGTTGGACCAAAC
EX764008       <-- TGACATCGACGGTTGTTTTTCCATTACAGAACCTTCCGGTTGGACCAAAC
EY940699       <-- TGACATCTACGGTTGTTTTTCCATTACAGAACCTTCCGGTTGGACCAAAC
EY912721       --> ..................................................
EV542653       --> ..................................................
EY936422       --> ..................................................
EX753348       --> ..................................................
FD985533       --> ..................................................

               1151   -   1201
UN21537        --> TGGAAGTCGATGCCGTAAGGGAAGTAATCAGCTCTTGCTAAGGACTGAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD989787       <-- ..................................................
EY917162       <-- ..................................................
EV538704       <-- TGGAAGTCGATGCCGTAAGGGAAGTAATAAGCTCTTGCTAAGGACTGAAG
FD552285       <-- TGGAAGTCGATGCCGTAAGGGAAGTAATCAGCTCTTGCTAAGGACTGAAG
EX749734       <-- TGGAAGTCGATGCCGTAAGGGAAGTAATCAGCTCTTGCTAAGGACTGAAG
FD568985       <-- TGGAAGTCGATGCCGTAAGGGAAGTAATCAGCTCTTGCTAAGGACTGAAG
EX764008       <-- TGGAAGTCGATGCCGTAAGGGAAGTAATCAGCTCTTGCTAAGGACTGAAG
EY940699       <-- TGGAAGTCGATGCCGTAAGGGAAGTAATCAGCTCTTGCTAAGGACTGAAG
EY912721       --> ..................................................
EV542653       --> ..................................................
EY936422       --> ..................................................
EX753348       --> ..................................................
FD985533       --> ..................................................

               1201   -   1251
UN21537        --> CTGATTGTTGTTTCCACTGTCAACCAAAGAATCACCAAATATGAAGTAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD989787       <-- ..................................................
EY917162       <-- ..................................................
EV538704       <-- CTGATTGTTGTTTCCACTGTCAACCAAAGAATCTCCAAATATGAAGTAGC
FD552285       <-- CTGATTGTTGTTTCCACTGTCAACCAAAGAATCACCAAATATGAAGTAGC
EX749734       <-- CTGGTTGTTGTTTCCACTGTCAACCAAAGAATCACCAAATATGAAGTAGC
FD568985       <-- CTGATTGTTGTTTCCACTGTCAACCAAAGAATCACCAAATATGAAGTAGC
EX764008       <-- CTGATTGTTGTTTCCACTGTAAACCAAAGAATCACCAAATATGAAGTAGC
EY940699       <-- CTGATTGTTGTTTCCACTGTCAACCAAAGAATCACCAAATATGAAGTAGC
EY912721       --> ..................................................
EV542653       --> ..................................................
EY936422       --> ..................................................
EX753348       --> ..................................................
FD985533       --> ..................................................

               1251   -   1301
UN21537        --> ATGGTGCTATAGGCTCACCTATAGCCATGTTCAAGACCATAGCTACCATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD989787       <-- ..................................................
EY917162       <-- ..................................................
EV538704       <-- ATGGTGCTATAGGCTCACCTATAGCCATCTTCAAGACCATAGCTACCATC
FD552285       <-- ATGGTGCTATAGGCTCACCTATAGCCATGTTCAAGACCATAGCTACCATC
EX749734       <-- ATGGTGCTATAGGCTCACCTATAGCCATGTTCAAGACCATAGCTACCATC
FD568985       <-- ATGGTGCTATAGGCTCACCTATAGCCATGTTCAAGACCATAGCTACCATC
EX764008       <-- ATGGTGCTATAGGCTCACCTATAGCCATGTTCAAGACCATAGCTACCATC
EY940699       <-- ATGGTGCTATAGGCTCACCTATAGCCATGTTCAAGACCATAGCTACCATC
EY912721       --> ..................................................
EV542653       --> ..................................................
EY936422       --> ..................................................
EX753348       --> ..................................................
FD985533       --> ..................................................

               1301   -   1351
UN21537        --> ATCATAATCATTACACAAACTCTAGCCATCTCTCTAGAAAAACCTTATCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD989787       <-- ..................................................
EY917162       <-- ..................................................
EV538704       <-- ATCATAATCATTACACAAACTCTAGCCATCTCTCTAGACAAACCTTATCC
FD552285       <-- ATCATAATCATTACACAAACTCTAGCCATCTCTCTAGAAGAACCTTATCC
EX749734       <-- ATCATAATCATTACACAAACTCTAGCCATCTCTCTAGAAAAACCTTATCC
FD568985       <-- ATCATAATCATTACACAGACTCTAGCCATCTCTCTGGAAAAACCTTATCC
EX764008       <-- ATCATAATCATTACACAAACTCTAGCCATCTCTCTAGAAGAACCTTATCC
EY940699       <-- ATCATAATCATTACACAGACTCTAGCCATCTCTCTGGAAAAACCTTATCC
EY912721       --> ..................................................
EV542653       --> ..................................................
EY936422       --> ..................................................
EX753348       --> ..................................................
FD985533       --> ..................................................

               1351   -   1401
UN21537        --> GGTAAGAGAGAGAATGCGCGAAGAAGAGGAGAGAAAGAGATACTGGTTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD989787       <-- ..................................................
EY917162       <-- ..................................................
EV538704       <-- GGTAAGAGAGAGAATGCGCGAAGAAGAGGAGAGAAAGAGATACTGGTTTc
FD552285       <-- GGTAAGAGAGAGAATGTGCGAAGAAGAGGAGAG--AGAGATACTGGTTTc
EX749734       <-- GGTAAGAGAGAGAATGCGCGAAGAAGAGGTGAGA................
FD568985       <-- GGTAAGAGAGAGAATGCGCGAAGAAGAGGAGAGAAAGAGATACTGGTTTc
EX764008       <-- GGTAAGAGAGAGAATGTGCGAAGAAGAGGAGAG--AGAGATACTGGTTTc
EY940699       <-- GGTAAGAGAGAGAATGCGCGAAGAAGAGGAGAGAAAGAGATACTGGTTTG
EY912721       --> ..................................................
EV542653       --> ..................................................
EY936422       --> ..................................................
EX753348       --> ..................................................
FD985533       --> ..................................................

               1401   -   1451
UN21537        --> AGAACGTGAAGAATGTAAATGGGTGTATATAATAGAGGTCAGAAGAATAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD989787       <-- ..................................................
EY917162       <-- ..................................................
EV538704       <-- cc................................................
FD552285       <-- c.................................................
EX749734       <-- ..................................................
FD568985       <-- ..................................................
EX764008       <-- c.................................................
EY940699       <-- AGAACGTGAAGAATGTAAATGGGTGTATATAATAGAGGTCAGAAGAATAT
EY912721       --> ..................................................
EV542653       --> ..................................................
EY936422       --> ..................................................
EX753348       --> ..................................................
FD985533       --> ..................................................

               1451   -   1501
UN21537        --> GGAGGGAATGACCC
                   ~~~~~~~~~~~~~~
FD989787       <-- ..............
EY917162       <-- ..............
EV538704       <-- ..............
FD552285       <-- ..............
EX749734       <-- ..............
FD568985       <-- ..............
EX764008       <-- ..............
EY940699       <-- GGAGGGAATGACCC
EY912721       --> ..............
EV542653       --> ..............
EY936422       --> ..............
EX753348       --> ..............
FD985533       --> ..............