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Alignment for radish unigene UN21547

               1      -     51
UN21547        --> AAGGAACAAATCTCTAGTACTGTCGAATTCGAACAGAAAGACAACAAAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW723387       <-- AAGGAACAAATCTCTAGTACTGTCGAATTCGAACAGAAAGACAACAAAAG  Raphanus sativus cv Early Scarlet Globe
EX896617       <-- ..........................................AACAAAAG  Raphanus sativus cv Early Scarlet Globe
FD986850       <-- ................................tttttttttcgACAAAAG  Raphanus raphanistrum subsp. landra
FD979839       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV527342       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD533015       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EX746876       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD544119       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX749654       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EW723337       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EX764353       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX751187       --> AAGGAACAAATCTCTACTACTGTCGAATTCGAACAGAATGACAACAAAAG  Raphanus raphanistrum subsp. maritimus
EX768969       --> AAGGAACAAATCTCTAGTACTGTCGAATTCGAACAGAAAGACAACAAAAG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD552737       --> AAGGAACAAATCTCTAGTACTGTCGAATTCGAACAGAAAGACAAAAAAAG  Raphanus raphanistrum subsp. landra
EW728400       --> .gGGAACAAATCTCTAGAACTGTCGAATTCGAACAGAATGACAACAAAAG  Raphanus sativus cv Early Scarlet Globe
EY942933       --> ..GGAACAAATCTCTAGAACTGTCGAATTCGAACAGAATGACAACAAAAG  Raphanus sativus cv Rat-Tail Radish #3870
FD529323       --> .cGGAACAAATCTCTACTACTGTCGAATTCGAACAGAATGACAACAAAAG  Raphanus raphanistrum subsp. maritimus
FD977091       --> .gGGAACAAATCTCTAGTACTGTCGAATTCGAACAGAAAGACAACAAAAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EV570896       --> ...GAACAAATCTCTAGTACTGTCGAATTCGAACAGAAAGACAACAAAAG  Raphanus raphanistrum subsp. landra
EV570897       --> ...GAACAAATCTCTAGTACTGTCGAATTCGAACAGAAAGACAACAAAAG  Raphanus raphanistrum subsp. landra
FD974940       --> ...........gTCTAGTACTGTCGAATTCGAACAGAAAGACAACAAAAG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD974895       --> .............................CGAACAGAAAGACAACAAAAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EW728779       --> ......................................cGACAACAAAAG  Raphanus sativus cv Early Scarlet Globe
FD983017       --> .............................................AAAAG  Raphanus raphanistrum subsp. landra
EW727679       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EX768698       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EW736756       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EX753294       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD975818       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY909869       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX774835       --> ..................................................  Raphanus raphanistrum subsp. landra

               51     -    101
UN21547        --> CTTCGGTGAGTAGAAATCAAAGAAAATGCTACATGTCCAATGAAAA-AAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW723387       <-- CTTCGGTGAGTAGAAATCAAAGAAAATGCTACATGTCCAATGAAAA-AAA  Raphanus sativus cv Early Scarlet Globe
EX896617       <-- CTTCGGTGAGTAGAAATCAAAGAAAATGCTACATGTCCAATGAAAA-AAA  Raphanus sativus cv Early Scarlet Globe
FD986850       <-- CTTCGGTGAGTAGAAATCAAAGAAAATGCTACATGTCCAATGAAAA-AAA  Raphanus raphanistrum subsp. landra
FD979839       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV527342       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD533015       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EX746876       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD544119       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX749654       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EW723337       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EX764353       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX751187       --> ATTCGGTGAGAAGAAATCAAAGAAAATGCTACATGTCCAATGAAAAGAAA  Raphanus raphanistrum subsp. maritimus
EX768969       --> CTTCGGTGAGTAGAAATCAAAGAAAATGCTACATGTCCAATGAAAA-AAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD552737       --> CTTCGGTGAGTAGAAATCAAAGAAAATGCTACATGTCCAATGAAAA-AAA  Raphanus raphanistrum subsp. landra
EW728400       --> CTTCGGCGAGAAGAAATCAAAGAAAATGCTACATGTCCAATGAAAA-AAA  Raphanus sativus cv Early Scarlet Globe
EY942933       --> CTTCGGCGAGAAGAAATCAAAGAAAATGCTACATGTCCAATGAAAA-AAA  Raphanus sativus cv Rat-Tail Radish #3870
FD529323       --> ATTCGGTGAGAAGAAATCAAAGAAAATGCTACATGTCCAATGAAAAGAAA  Raphanus raphanistrum subsp. maritimus
FD977091       --> CTTCGGTGAGTAGAAATCAAAGAAAATGCTACATGTCCAATGAAAA-AAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV570896       --> CTTCGGTGAGTAGAAATCAAAGAAAATGCTACATGTCCAATGAAAA-AAA  Raphanus raphanistrum subsp. landra
EV570897       --> CTTCGGTGAGTAGAAATCAAAGAAAATGCTACATGTCCAATGAAAA-AAA  Raphanus raphanistrum subsp. landra
FD974940       --> CTTCGGTGAGTAGAAATCAAAGAAAATGCTACATGTCCAATGAAAA-AAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD974895       --> CTTCGGTGAGTAGAAATCAAAGAAAATGCTACATGTCCAATGAAAA-AAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EW728779       --> CTTCGGTGAGTAGAAATCAAAGAAAATGCTACATGTCCAATGAAAA-AAA  Raphanus sativus cv Early Scarlet Globe
FD983017       --> CTTCGGTGAGTAGAAATCAAAGAAAATGCTACATGTCCAATGAAAA-AAA  Raphanus raphanistrum subsp. landra
EW727679       --> .....GTGAGTGGAAATCAAAGAAAAAGCTACATGTCCAATGAAAA-AAA  Raphanus sativus cv Early Scarlet Globe
EX768698       --> ...........gGAAATCAAAGAAAATGCTACATGTCCAATGAAAA-AAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EW736756       --> .............................TACATGTCCAATGAAAA-AAA  Raphanus sativus cv Rat-Tail Radish #3870
EX753294       --> .............................TACATGTCCAATGAAAAGAAA  Raphanus raphanistrum subsp. maritimus
FD975818       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY909869       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX774835       --> ..................................................  Raphanus raphanistrum subsp. landra

               101    -    151
UN21547        --> A-CCAGTTCATATACTAGTTTCACGATAGGGTTGTAAGAATAA--GATGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW723387       <-- AACCAGTTCATATACTAGTTTCACGATAGGGTTGTAAGAATAA--GATGC  Raphanus sativus cv Early Scarlet Globe
EX896617       <-- AACCAGTTCATATACTAGTTTCACGATAGGGTTGTAAGAATAA--GATGC  Raphanus sativus cv Early Scarlet Globe
FD986850       <-- A-CCAGTTCATATACTAGTTTCACGATAGGGTTGTACGAATAA--GATGC  Raphanus raphanistrum subsp. landra
FD979839       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV527342       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD533015       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EX746876       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD544119       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX749654       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EW723337       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EX764353       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX751187       --> A-ACA-TTCATATACTAGTTTCACGATAGGGTTGTAAGAATAA--GATGT  Raphanus raphanistrum subsp. maritimus
EX768969       --> A-CCAGTTCATATACTAGTTTCACGATAGGGTTGTAAGAATAA--GATGC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD552737       --> A-CCGGTTCATATACTAGTTTCACGATAGGGTTGTACGAATAA--GATGC  Raphanus raphanistrum subsp. landra
EW728400       --> A-ACAATTCATATACTAGTTTCACGATAGGGTTGTAAGAATAAAAGATGT  Raphanus sativus cv Early Scarlet Globe
EY942933       --> A-ACAATTCATATACTAGTTTCACGATAGGGTTGTAAGAATAAAAGATGT  Raphanus sativus cv Rat-Tail Radish #3870
FD529323       --> A-ACA-TTCATATACTAGTTTCACGATAGGGTTGTAAGAATAA--GATGT  Raphanus raphanistrum subsp. maritimus
FD977091       --> A-CCAGTTCATATACTAGTTTCACGATAGGGTTGTAAGAATAA--GATGC  Raphanus raphanistrum subsp. raphanistrum (NY)
EV570896       --> A-CCAGTTCATATACTAGTTTCACGATAGGGTTGTACGAATAA--GATGC  Raphanus raphanistrum subsp. landra
EV570897       --> A-CCAGTTCATATACTAGTTTCACGATAGGGTTGTACGAATAA--GATGC  Raphanus raphanistrum subsp. landra
FD974940       --> AACCAGTTCATATACTAGTTTCACGATAGGGTTGTAAGAATAA--GATGC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD974895       --> --CCAGTTCATATACTAGTTTCACGATAGGGTTGTAAGAATAA--AATGC  Raphanus raphanistrum subsp. raphanistrum (NY)
EW728779       --> A-CCAGTTCATATACTAGTTTCACGATAGGGTTGTAAGAATAA--GATGC  Raphanus sativus cv Early Scarlet Globe
FD983017       --> A-CCAGTTCATATACTAGTTTCACGATAGGGTTGTACGAATAA--GATGC  Raphanus raphanistrum subsp. landra
EW727679       --> A-CCAGTTC-TATACTAATTTCACGATAGGGTTGTAAGAATAA--GAAGC  Raphanus sativus cv Early Scarlet Globe
EX768698       --> A-CCAGTTCATATACTAGTTTCACGATAGGGTTGTAAGAATAA--GATGC  Raphanus raphanistrum subsp. raphanistrum (NY)
EW736756       --> A-ACAATTCATATACTAGTTTCACGATAGGGTTGTAAGAATAAAAGATGT  Raphanus sativus cv Rat-Tail Radish #3870
EX753294       --> A-ACA-TTCATATACTAGTTTCACGATAGGGTTGTAAGAATAA--GATGT  Raphanus raphanistrum subsp. maritimus
FD975818       --> ........................GATAGGGTTGTAAGAATAA--GATGC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY909869       --> .........................ATAGGGTTGTAAGAATAA--GATGC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX774835       --> ..................................................  Raphanus raphanistrum subsp. landra

               151    -    201
UN21547        --> TCATTCTGATAGATTTATAAAAGCAGCGACTCTAGGTGAGACAAA-GAGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW723387       <-- TCATTCTGATAGATTTATAAAAGCAGCGACTCTAGGTGAGACAGA-GAGT  Raphanus sativus cv Early Scarlet Globe
EX896617       <-- TCATTCTGATAGATTTATAAAAGCAGCGACTCTAGGTGAGACAGA-GAGT  Raphanus sativus cv Early Scarlet Globe
FD986850       <-- TCATTCTGATAGATCTATAAAAGCAGCGACTCTAGGTGAGACAAA-GAGT  Raphanus raphanistrum subsp. landra
FD979839       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV527342       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD533015       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EX746876       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD544119       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX749654       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EW723337       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EX764353       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX751187       --> TCATTCTGATAGATT-ATAAAAGCAACAACTCCAGGTGAGACAAA-GAGT  Raphanus raphanistrum subsp. maritimus
EX768969       --> TCATTCTGATAGATTTATAAAAGCAGCGACTCTAGGTGAGACAGA-GAGT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD552737       --> TCATTCTGATAGATCTATAAAAGCAGCGACTCTAGGTGAGACAAA-GAGT  Raphanus raphanistrum subsp. landra
EW728400       --> TCGTTCTGATA-A-TTA-AAAAGCAACGACTCTAGGTGAGACAAAAGAGT  Raphanus sativus cv Early Scarlet Globe
EY942933       --> TCGTTCTGATA-A-TTA-AAAAGCAACGACTCTAGGTGAGACAAAAGAGT  Raphanus sativus cv Rat-Tail Radish #3870
FD529323       --> TCATTCTGATAGATT-ATAAAAGCAACGACTCCAGGTGAGACAAA-GAGT  Raphanus raphanistrum subsp. maritimus
FD977091       --> TCATTCTGATAGATTTATAAAAGCAGCGACTCTAGGTGAGACAGA-GAGT  Raphanus raphanistrum subsp. raphanistrum (NY)
EV570896       --> TCATTCTGATAGATCTATAAAAGCAGCGACTCTAGGTGAGACAAA-GAGT  Raphanus raphanistrum subsp. landra
EV570897       --> TCATTCTGATAGATCTATAAAAGCAGCGACTCTAGGTGAGACAAA-GAGT  Raphanus raphanistrum subsp. landra
FD974940       --> TCATTCTGATAGATTTATAAAAGCAGCGACTCTAGGTGAGACAGA-GAGT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD974895       --> TCATTCTGATAGATTTATAAAAGCAGCGACTCTAGGTGAGACAGA-AAGT  Raphanus raphanistrum subsp. raphanistrum (NY)
EW728779       --> TCATTCTGATAGATTTATAAAAGCAGCGACTCTAGGTGAGACAGA-GAGT  Raphanus sativus cv Early Scarlet Globe
FD983017       --> TCATTCTGATAGATCTATAAAAGCAGCGACTCTAGGTGAGACAAA-GAGT  Raphanus raphanistrum subsp. landra
EW727679       --> TCATTCTGATAGATTTATAAAAGCAGCGACTCTAGGTGAGACAGA-AAGT  Raphanus sativus cv Early Scarlet Globe
EX768698       --> TCATTCTGATAGATTTATAAAAGCAGCGACTCTAGGTGAGACAGA-AAGT  Raphanus raphanistrum subsp. raphanistrum (NY)
EW736756       --> TCGTTCTGATA-A-TTA-AAAAGCAACGACTCTAGGTGAGACAAAAGAGT  Raphanus sativus cv Rat-Tail Radish #3870
EX753294       --> TCATTCTGATAGATT-ATAAAAGCAACGACTCCAGGTGAGACAAA-GAGT  Raphanus raphanistrum subsp. maritimus
FD975818       --> TCATTCTGATAGATTTATAAAAGCAGCGACTCTAGGTGAGACAGA-GAGT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY909869       --> TCATTCTGATAGATTTATAAAAGCAGCGACTCTAGGTGAGACAGA-GAGT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX774835       --> ..................AAAAGCAGCGACTCTAGGGGAGACAAA-GAGT  Raphanus raphanistrum subsp. landra

               201    -    251
UN21547        --> CCTTATGCATTGTTTTAGCAGTGAACCATGGATTTTGAGTTCTTTCAGGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW723387       <-- CCTGATGCATTGTTTTAGCAGTGAACCATGGATTTTGAGTTCTTTCAGGC  Raphanus sativus cv Early Scarlet Globe
EX896617       <-- CCTGATGCATTGTTTTAGCAGTGAACCATGGATTTTGAGTTCTTTCAGGC  Raphanus sativus cv Early Scarlet Globe
FD986850       <-- CCTTATGCATTGTTTTAGCAGTGAACCACGGATTTTGAGTTCTTTCAGGC  Raphanus raphanistrum subsp. landra
FD979839       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV527342       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD533015       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EX746876       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD544119       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX749654       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EW723337       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EX764353       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX751187       --> CCTTATGCATTGTTTTAGCAGTGAACCATGGATTTTGAGTTCTTTCAGGC  Raphanus raphanistrum subsp. maritimus
EX768969       --> CCTGATGCATTGTTTTAGCAGTGAACCATGGATTTTGAGTTCTTTCAGGC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD552737       --> CCTTATGCATTGTTTTAGCAGTGAACCACGGATTTTGAGTTCTTTCAGGC  Raphanus raphanistrum subsp. landra
EW728400       --> CCTTATGCATTGTTTTAGCAGTGAACCACGGATTTTGAGTTCTTTCAGGC  Raphanus sativus cv Early Scarlet Globe
EY942933       --> CCTTATGCATTGTTTTAGCAGTGAACCACGGATTTTGAGTTCTTTCAGGC  Raphanus sativus cv Rat-Tail Radish #3870
FD529323       --> CCTTATGCATTGTTTTAGCAGTGAACCATGGATTTTGAGTTCTTTCAGGC  Raphanus raphanistrum subsp. maritimus
FD977091       --> CCTGATGCATTGTTTTAGCAGTGAACCATGGATTTTGAGTTCTTTCAGGC  Raphanus raphanistrum subsp. raphanistrum (NY)
EV570896       --> CCTTATGCATTGTTTTAGCAGTGAACCACGGATTTTGAGTTCTTTCAGGC  Raphanus raphanistrum subsp. landra
EV570897       --> CCTTATGCATTGTTTTAGCAGTGAACCACGGATTTTGAGTTCTTTCAGGC  Raphanus raphanistrum subsp. landra
FD974940       --> CCTGATGCATTGTTTTAGCAGTGAACCATGGATTTTGAGTTCTTTCAGGC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD974895       --> CCTGATGCATTGTTTTAGCAGTGAACCATGGATTTTGAGTTCTTTCAGGC  Raphanus raphanistrum subsp. raphanistrum (NY)
EW728779       --> CCTGATGCATTGTTTTAGCAGTGAACCATGGATTTTGAGTTCTTTCAGGC  Raphanus sativus cv Early Scarlet Globe
FD983017       --> CCTTATGCATTGTTTTAGCAGTGAACCACGGATTTTGAGTTCTTTCAGGC  Raphanus raphanistrum subsp. landra
EW727679       --> CCTGATGCATTGTTTTAGCAGTGAACCATGGATTTTGAGTTCTTTCAGGC  Raphanus sativus cv Early Scarlet Globe
EX768698       --> CCTGATGCATTGTTTTAGCAGTGAACCATGGATTTTGAGTTCTTTCAGGC  Raphanus raphanistrum subsp. raphanistrum (NY)
EW736756       --> CCTTATGCATTGTTTTAGCAGTGAACCACGGATTTTGAGTTCTTTCAGGC  Raphanus sativus cv Rat-Tail Radish #3870
EX753294       --> CCTTATGCATTGTTTTAGCAGTGAACCATGGATTTTGAGTTCTTTCAGGC  Raphanus raphanistrum subsp. maritimus
FD975818       --> CCTGATGCATTGTTTTAGCAGTGAACCATGGATTTTGAGTTCTTTCAGG-  Raphanus raphanistrum subsp. raphanistrum (NY)
EY909869       --> CCTGATGCATTGTTTTAGCAGTGAACCATGGATTTTGAGTTCTTTCAGGC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX774835       --> CCTTATGCATTGTTTTAGCAGTGAACCACGGATTTTGAGTTCTTTCAGGC  Raphanus raphanistrum subsp. landra

               251    -    301
UN21547        --> GAAAGATTGAAGCGCTCTCTCGAAGTTATCTTCAGCAGATGCTGCTCTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW723387       <-- GAAAGATTGAAGCGCTCTCTCGAAGTTATCTTCAGCAGATGCTGCTCTAT  Raphanus sativus cv Early Scarlet Globe
EX896617       <-- GAAAGATTGAAGCGCTCTCTCGAAGTTATCTTCAGCAGATGCTGCTCTCT  Raphanus sativus cv Early Scarlet Globe
FD986850       <-- GAAAGATTGAAGCGCTCTCTCGAAGTTATCTTCAGCAGATGCTGCTCTCT  Raphanus raphanistrum subsp. landra
FD979839       <-- ..............................TTCAGCAGATGCTGCTCTCT  Raphanus raphanistrum subsp. raphanistrum (NY)
EV527342       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD533015       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EX746876       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD544119       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX749654       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EW723337       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EX764353       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX751187       --> GAAAGATTGAAGCGCTCTCTCGAAGTTATCTTCAGCAGAGGCTGCTCGCT  Raphanus raphanistrum subsp. maritimus
EX768969       --> GAAAGATTGAAGCGCTCTCTCGAAGTTATCTTCAGCAGATGCTGCTCTCT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD552737       --> GAAAGATTGAAGCGCTCTCTCGAAGTTATCTTCAGCAGATGCTGCTCTCT  Raphanus raphanistrum subsp. landra
EW728400       --> GAAAGATTGAAGCGCTCTCACGAAGTTATCTTCAGCAGATGCTGCTCGCT  Raphanus sativus cv Early Scarlet Globe
EY942933       --> GAAAGATTGAAGCGCTCTCTCGAAGTTATCTTCAGCAGATGCTGCTCGCT  Raphanus sativus cv Rat-Tail Radish #3870
FD529323       --> GAAAGATTGAAGCGCTCTCTCGAAGTTATCTTCAGCAGAGGCTGCTCGCT  Raphanus raphanistrum subsp. maritimus
FD977091       --> GAAAGATTGAAGCGCTCTCTCGAAGTTATCTTCAGCAGATGCTGCTCTCT  Raphanus raphanistrum subsp. raphanistrum (NY)
EV570896       --> GAAAGATTGAAGCGCTCTCTCGAAGTTATCTTCAGCAGATGCTGCTCTCT  Raphanus raphanistrum subsp. landra
EV570897       --> GAAAGATTGAAGCGCTCTCTCGAAGTTATCTTCAGCAGATGCTGCTCTCT  Raphanus raphanistrum subsp. landra
FD974940       --> GAAAGATTGAAGCGCTCTCTCGAAGTTATCTTCAGCAGATGCTGCTCTCT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD974895       --> GAAAGATTGAAGCGCTCTCTCGAAGTTATCTTCAGCAAATGCTGCTCTCT  Raphanus raphanistrum subsp. raphanistrum (NY)
EW728779       --> GAAAGATTGAAGAGCTCTCTCGAAGTTATCTTCAGCAGATGCTGCTCTCT  Raphanus sativus cv Early Scarlet Globe
FD983017       --> GAAAGATTGAAGCGCTCTCTCGAAGTTATCTTCAGCAGATGCTGCTCTCT  Raphanus raphanistrum subsp. landra
EW727679       --> GAAAGATTGAAGCGCTCTCTCGAAGTTATCTTCAGCAGATGCTGCTCTCT  Raphanus sativus cv Early Scarlet Globe
EX768698       --> GAAAGATTGAAGCGCTCTCTCGAAGTTATCTTCAGCAGATGCTGCTCTCT  Raphanus raphanistrum subsp. raphanistrum (NY)
EW736756       --> GAAAGATTGAAGCGCTCTCTCGAAGTTATCTTCAGCAGATGCTGCTCGCT  Raphanus sativus cv Rat-Tail Radish #3870
EX753294       --> GAAAGATTGAAGCGCTCTCTCGAAGTTATCTTCAGCAGAGGCTGCTCGCT  Raphanus raphanistrum subsp. maritimus
FD975818       --> GAAAGATTGAAGCGCTCTCTCGAAGTTATCTTCAGCAGATGCTGCTCTCT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY909869       --> GAAAGATTGAAGCGCTCTCTCAAAGTTATCTTCAGC..............  Raphanus raphanistrum subsp. raphanistrum (NY)
EX774835       --> GAAAGATTGAAGCGCTCTCTCGAAGTTATCTTCAGCAAATGCTGCTCTCT  Raphanus raphanistrum subsp. landra

               301    -    351
UN21547        --> TCACAAGTACATGTTCTGGATGCGACAGTTTCAGCTGGCTTAGGTAACGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW723387       <-- TCACAAGTACATGTTCTGGATGCGACAGTTTCAGCTGGCTTAGGTAACGT
EX896617       <-- TCACAAGTACATGTTCTGGATGCGACAGTTTCAGCTGGCTTAGGTAACGT
FD986850       <-- TCACAAGTACATGTTCTGGATGCGACAGTTTCAGCTGGCTTAGGTAACGT
FD979839       <-- TCACAAGTACATGTTCTGGATGCGACAGTTTCAGCTGGCTTAGGTAACGT
EV527342       <-- ...........................................GTAACGT
FD533015       <-- ..................................................
EX746876       <-- ..................................................
FD544119       <-- ..................................................
EX749654       <-- ..................................................
EW723337       <-- ..................................................
EX764353       <-- ..................................................
EX751187       --> TCACAAGTACATGCTCTGGATGCGACAGTTTCAGCTGGCTTAGGTAACGT
EX768969       --> TCACAAGTACATGTTCTGGATGCGACAGTTTCAGCTGGCTTAGGTAACGT
FD552737       --> TCACAAGTACATGTTCTGGATGCGACAGTTTCAGCTGGCTTAGGTAACGT
EW728400       --> TCACAAGTACATGTTCTGGATGCGACAGTTTCAGCTGGCTTAGGTAACGT
EY942933       --> TCACAAGTACATGTTCTGGATGCGACAGTTTCAGCTGGCTTAGGTAACGT
FD529323       --> TCACAAGTACATGCTCTGGATGCGACAGTTTCAGCTGGCTTAGGTAACGT
FD977091       --> TCACAAGTACATGTTCTGGATGCGACAGTCTCAGCTGGCTTAGGTAACGT
EV570896       --> TCACAAGTACATGTTCTGGATGCGACAGTTTCAGCTGGCTTAGGTAACGT
EV570897       --> TCACAAGTACATGTTCTGGATGCGACAGTTTCAGCTGGCTTAGGTAACGT
FD974940       --> TCACAAGTACATGTTCTGGATGCGACAGTTTCAGCTGGCTTAGGTAACGT
FD974895       --> TCACAAGTACATGTTCTGGATGCGACAGTTTCAGCTGGCTTAGGTAACGT
EW728779       --> TCACAAGTACATGTTCTGGATGCGACAGTTTCAGCTGGCTTAGGTAACGT
FD983017       --> TCACAAGTACATGTTCTGGATGCGACAGTTTCAGCTGGCTTAGGTAACGT
EW727679       --> TCACAAGTACATGTTCTGGATGCGACAGTTTCAGCTGGCTTAGGTAACGT
EX768698       --> TCACAAGCACATGTTCTGGATGCGACAGTTTCAGCTGGCTTAGGTAACGT
EW736756       --> TCACAAGTACATGTTCTGGATGCGACAGTTTCAGCTGGCTTAGGTAACGT
EX753294       --> TCACAAGTACATGCTCTGGATGCGACAGTTTCAGCTGGCTTAGGTAACGT
FD975818       --> TCACAAGTACATGTTCTGGATGCGACAGTTTCAGCTGGCTTAGGTAACGT
EY909869       --> ..................................................
EX774835       --> TCACAAGTACATGTTCTGGATGCGACAGTTTCAGCTGGCTTAGGTAACGT

               351    -    401
UN21547        --> GATGATGATTGTTTCCCCACATGAATACTGCACACAACTAAGTTTGCAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW723387       <-- GATGATGATTGTTTCCCCACATGAATAC......................
EX896617       <-- GATGATGATTGTTTCCCCACATGAATACTGCACACAACTAAGTTTGCAAG
FD986850       <-- GATGATGATTGTTTCCCCACATGAATACTGCACACAACTAAGTTTGCAAG
FD979839       <-- GATGATGATTGTTTCCCCACATGAATACTGCACACAACTAAGTTTGCAAG
EV527342       <-- GATGATGATTGTTTCCCCACATGAATACTGCACACAACTAAGTTTGCAAG
FD533015       <-- ..................................................
EX746876       <-- ..................................................
FD544119       <-- ..................................................
EX749654       <-- ..................................................
EW723337       <-- ..................................................
EX764353       <-- ..................................................
EX751187       --> GATGATGATTGTTTCCCCACATGAATACTGCACACAACTAAGTTTGCAAG
EX768969       --> GATGATGATTGTTTCCCCACATGAATACTGCACACAACTAAGTTTGCAAG
FD552737       --> GATGATGATTGTTTCCCCACATGAATACTGCACACAACTAAGTTTGCAAG
EW728400       --> GATGATGATTGTTTCCCCACATGAATACTGCACACAACTAAGTTTGCAAG
EY942933       --> GATGATGATTGTTTCCCCACATGAATACTGCACACAACTAAGTTTGCAAG
FD529323       --> GATGATGATTGTTTCCCCACATGAATACTGCACACAACTAAGTTTGCAAG
FD977091       --> GATGATGATTGTTTCCCCACATGAATACTGCACACAACTAAGTTTGCAAG
EV570896       --> GATGATGATTGTTTCCCCACATGAATACTGCACACAACTAAGTTTGCAAG
EV570897       --> GATGATGATTGTTTCCCCACATGAATACTGCACACAACTAAGTTTGCAAG
FD974940       --> GATGATGATTGTTTCCCCACATGAATACTGCACACAACTAAGTTTGCAAG
FD974895       --> GATGATGATTGTTTCCCCACATGAATACTGCACACAACTAAGTTTGCAAG
EW728779       --> GATGATGATTGTCTCCCCACATGAATACTGCACACAACTAAGTTTGCAAG
FD983017       --> GATGATGATTGTTTCCCCACATGAATACTGCACACAACTAAGTTTGCAAG
EW727679       --> GATGATGATTGTTTGCCCACATGAATACTGCACACAACTAAGTTTGCAAG
EX768698       --> GATGATGATTGTTTCCCCACATGAATACTGCACACAACTAAGTTTGCAAG
EW736756       --> GATGATGATTGTTTCCCCACATGAATACTGCACACAACTAAGTTTGCAAG
EX753294       --> GATGATGATTGTTTCCCCACATGAATACTGCACACAACTAAGTTTGCAAG
FD975818       --> GATGATGATTGTTTCCCCACATGAATACTGCACACAACTAAGTTTGCAAG
EY909869       --> ..................................................
EX774835       --> GATGATGATTGTTTCCCCACATGAATACTGCACACAACTAAGTTTGCAAG

               401    -    451
UN21547        --> AGTTTCTGGGTCTTTCGCATCCTTGTTGAGTGCTTCAAGCAGAAGAGTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW723387       <-- ..................................................
EX896617       <-- AGTTTCTGGGTCTTTCGCATCCTTGTTGAGTGCTTCAAGCAGAAGAGTCT
FD986850       <-- AGTTTCTGGGTCTTTCGCATCCTTGTTGAGTGCTTCAAGCAGAAGAGTCT
FD979839       <-- AGTTTCTGGGTCTTTCGCATCCTTGTTGAGTGCTTCAAGCAGAAGAGTCT
EV527342       <-- AGTTTCTGGGTCTTTCGCATCCTTGTTGAGTGCTTCAAGCAGAAGAGTCT
FD533015       <-- ................................CTTCAAGCAGAGGAGTCT
EX746876       <-- .................................................T
FD544119       <-- ..................................................
EX749654       <-- ..................................................
EW723337       <-- ..................................................
EX764353       <-- ..................................................
EX751187       --> AGTTTCTGGGTCTTTCGCATCCTTGTTGAGTGCTTCAAGCAGAAGAGTCT
EX768969       --> AGTTTCTGGGTCTTTCGCATCCTTGTTGAGTGCTTCAAGCAGAAGAGTCT
FD552737       --> AGTTTCTGGGTCTTTCGCATCCTTGTTGAGTGCCTCAAGCAGAAGAGTCT
EW728400       --> AGTTTCTGGGTCTTTCGCATCCTTGTTGAGTGCTTCAAGCAGAAGAGTCT
EY942933       --> AGTTTCTGGGTCTTTCGCATCCTTGTTGAGTGCTTCAAGCAGAAGAGTCT
FD529323       --> AGTTTCTGGGTCTTTCGCATCCTTGTTGAGTGCTTCAAGCAGAGGAGTCT
FD977091       --> AGTTTCTGGGTCTTTCGCATCCTTGTTGAGTGCTTCAAGCAGAAGAGTCT
EV570896       --> AGTTTCTGGGTCTTTCGCATCCTTGTTGAGTGCTTCAAGCAGAAAAGTCT
EV570897       --> AGTTTCTGGGTCTTTCGCATCCTTGTTGAGTGCTTCAAGCAGAAGAGTCT
FD974940       --> AGTTTCTGGGTCTTTCGCATCCTTGTTGAGTGCTTCAAGCAGAAGAGTCT
FD974895       --> AGTTTCTGGGTCTTTCACATCCTTGTTGAGTGCTTCAAGCAGA.......
EW728779       --> AGTTTCTGGGTCTTTCGCATCCTTGTTGAGTGCTTCAAGCAGAAGAGTCT
FD983017       --> AGTTTCTGGGTCTTTCGCATCCTTGTTGAGTGCTTCAAGCAGAAGAGTCT
EW727679       --> AGTTTCTGGGTCTTTCCCATCCTTGTTGAGTGCTTCAAGCAaaa......
EX768698       --> AGTTTCTGGGTCTTTCGCATCCTTGTTGAGTGCTTCAAGCAGAAGAGTCT
EW736756       --> AGTTTCTGGGTCTTTCGCATCCTTGTTGAGTGCTTCAAGCAGAAGAGTCT
EX753294       --> AGTTTTTGGGTCTTTCGCATCCTTGTTGAGTGCTTCAAGCAGAAGAGTCT
FD975818       --> AGTTTCTGGGTCTTTCGCATCCTTGTTGAGTGCTTCAAGCAG........
EY909869       --> ..................................................
EX774835       --> AGTTTCTGGGTCTTTCCCATCCTTGTTGAGTGCTTCAAGCAAAAAAGTCT

               451    -    501
UN21547        --> CAGCTTCTTCAAAGTTGCCCATATGCATGCAACAAACCGCCTTGCTGTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW723387       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EX896617       <-- CAGCTTCTTCAAAGTTACCCATATGCATGCAACAAACCGCCTTGCTGTTC  Raphanus sativus cv Early Scarlet Globe
FD986850       <-- CAGCTTCTTCAAAGTTGCCCATATGCATGCAACAAACCGCCTTGCTGTTC  Raphanus raphanistrum subsp. landra
FD979839       <-- CAGCTTCTTCAAAGTTACCCATATGCATGCAACAAACCGCCTTGCTGTTC  Raphanus raphanistrum subsp. raphanistrum (NY)
EV527342       <-- CAGCTTCTTCAAAGTTGCCCATATGCATGCAACAAACCGCCTTGCTGTTC  Raphanus raphanistrum subsp. maritimus
FD533015       <-- CAGCTTCTTCAAAGTTGCCCATATGCATGCAACAAACCGCCTTGCTGT-C  Raphanus raphanistrum subsp. maritimus
EX746876       <-- CAGCTTCTTCAAAGTTGCCCATATGCATGCAACAAACCGCCTTGCTGTTC  Raphanus raphanistrum subsp. maritimus
FD544119       <-- ....................ATATGCATGCAACAAACCGCCTTGCTGTTC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX749654       <-- .............................................ctgTC  Raphanus raphanistrum subsp. maritimus
EW723337       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EX764353       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX751187       --> CAGCTTCTTCAAAGTTGCCCATATGCATGCAACAAACCGCCTTGCTGTTC  Raphanus raphanistrum subsp. maritimus
EX768969       --> CAGCTTCTTCAAAGTTACCCATATGCATGCAACAAACCGCCTTGCTGTTC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD552737       --> CAGCTTCTTCAAAGTTGCCCATATGCATGCAACAAACCGCCTTGCTGTTC  Raphanus raphanistrum subsp. landra
EW728400       --> CAGCTTCTTCAAAGTTGCCCATATGCATGCAACAAACCGCCTTGCTGTTC  Raphanus sativus cv Early Scarlet Globe
EY942933       --> CAGCTTCTTCAAAGTTGCCCATATGCATGCAACAAACCGCCTTGCTGTTC  Raphanus sativus cv Rat-Tail Radish #3870
FD529323       --> CAGCTTCTTCAAAGTTGCCCATATGCATGCAACAAACCGCCTTGCTGTTC  Raphanus raphanistrum subsp. maritimus
FD977091       --> CAGCTTCTTCAAAGTTACCCATATGCATGCAACAAACCGCCTTGCTGTTC  Raphanus raphanistrum subsp. raphanistrum (NY)
EV570896       --> CAGCTTCTTCAAAGTTGCCCATATGCATGCAACAAACCGCCTTGCTGTTC  Raphanus raphanistrum subsp. landra
EV570897       --> CAGCTTCTTCAAAGTTGCCCATATGCATGCAACAAACCGCCTTGCTGTTC  Raphanus raphanistrum subsp. landra
FD974940       --> CAGCTTCTTCAAAGTTACCCATATGCATGCAACAAACCGCCTTGCTGTTC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD974895       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EW728779       --> CAGCTTCTTCAAAGTTACCCATATGCATGCAACAAACCGCCTTGCTGTTC  Raphanus sativus cv Early Scarlet Globe
FD983017       --> CAGCTTCTTCAAAGTTGCCCATATGCATGCAACAAACCGCCTTGCTGTTC  Raphanus raphanistrum subsp. landra
EW727679       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EX768698       --> CAGCTTCTTCAAAGTTACCCATATGCATGCAACAAACCGCCTTGCTGTAC  Raphanus raphanistrum subsp. raphanistrum (NY)
EW736756       --> CAGCTTCTTCAAAGTTGCCCATATGCATGCAACAAACCGCCTTGCTGTTC  Raphanus sativus cv Rat-Tail Radish #3870
EX753294       --> CAGCTTCTTCAAAGTTGCCCATATGCATGCAACAAACCGCCTTGCTGTTC  Raphanus raphanistrum subsp. maritimus
FD975818       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY909869       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX774835       --> CAGCTTCTTCAAAGTTGCCCATATGCATGCAACAAACCGCCTTGCTGTTC  Raphanus raphanistrum subsp. landra

               501    -    551
UN21547        --> AAGATCAAGCTTGTCATTGGGTACTTCTCAGAGAAATCCTGGAAGATTAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW723387       <-- ..................................................
EX896617       <-- AAGATCAAGCTTGTCATTGGGTACTTCTCAGAGAAATCCTGGAAGATTAG
FD986850       <-- AAGATCAAGCTTGTCATTGGGTACTTCTCAGAGAAATCCTGGAAGATTAG
FD979839       <-- AAGATCAAGCTTGTCATTGGGTACTTCTCAGAGAAATCCTGGAAGATTAG
EV527342       <-- AAGATCAAGCTTGTCATTGGGTACTTCTCAGAGAAATCCTGGAAGATTAG
FD533015       <-- AAGGTCAAGCTTGTCATTGGGTACTTCTCAGAGAAATC-T--GAGATTAG
EX746876       <-- AAGATCAAGCTTGTCATTGGGTACTTCTCAGAGAAATCCTGGAAGATTAG
FD544119       <-- AAGATCAAGCTTGTCATTGGGTACTTCTCAGAGAAATCCTGGAAGATTAG
EX749654       <-- AAGATCAAGCTTGTCATTGGGTACTTCTCAGAGAAATCCTGGAAGATTAG
EW723337       <-- AAGATCAAGCTTGTCATTGGGTACTTCTCAGAGAAATCCTGGAAGATTAG
EX764353       <-- ..................................................
EX751187       --> AAGATCAAGCTTGTCATTGGGTACTTCTCAGAGAAATCCTGGAAGATTAG
EX768969       --> AAGATCAAGCTTGTCATTGGGTACTTCTCAGAGAAATCCTGGAAGATTAG
FD552737       --> AAGATCAAGCTTGTCATTGGGTACTTCTCAGAGAAATCCTGGAAGATTAG
EW728400       --> AAGATCAAGCTTGTCATTGGGTACTTCTCAGAAAAATCCTGGAAGATTAG
EY942933       --> AAGATCAAGCTTGTCATTGGGTACTTCTCAGAGAAATCCTGGAAGATTAG
FD529323       --> AAGGTCAAGCTTGTCATTGGGTACTTCTCAGAGAAATCCTG--AGATTAG
FD977091       --> AAGATCAAGCTTGTCATTGGGTACTTCTCAGAAAAATCCTGGAAGATTAG
EV570896       --> AAGATCAAGCTTGTCATTGGGTACTTCTCAAAAAAATCCTGGAAGATTAA
EV570897       --> AAGATCAAGCTTGTCATTGGGTACTTCTCAGAGAAATCCTGGAAGATTAG
FD974940       --> AAGATCA...........................................
FD974895       --> ..................................................
EW728779       --> AAGATCAAGCTTGTCATTGGGTACTTCTCAAAGAAATCCTGGAAGATTAG
FD983017       --> AAGATCAAGCTTGTCATTGGGTACTTCTCAGAGAAATCCTGGAAGATTAG
EW727679       --> ..................................................
EX768698       --> AAGATCAAGCTTGTCATTGGGTACTTCTCAaaaaaa..............
EW736756       --> AAGATCAAGCTTGTCATTGGGTACTTCTCAGAGAAATCCTGGAAGATTAG
EX753294       --> AAGATCAAGCTTGTCATTGGGTACTTCTCAGAAAAATCCTGGAAGATTAG
FD975818       --> ..................................................
EY909869       --> ..................................................
EX774835       --> AAGATCAAGCTTGTCATTGGGTACTTCTCAaaaaaa..............

               551    -    601
UN21547        --> ATAAGCTTCCTGTATCTTGGAACCCCC-AACTGCCAGGTTCAACCATGCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW723387       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EX896617       <-- ATAAGCTTCTTGTATCTTGGAACCCCC-TACTGCCAGGTTCAACCATGCA  Raphanus sativus cv Early Scarlet Globe
FD986850       <-- ATAAGCTTCCTGTATCTTGGAACCCCC-AACTGCCAGGTTCAACCATGCA  Raphanus raphanistrum subsp. landra
FD979839       <-- AT................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV527342       <-- ATAAGCTTCCTGTATCTTGGAACCCCC-AACTGCCAGGTTCAACCATGCA  Raphanus raphanistrum subsp. maritimus
FD533015       <-- ATAAGCTTCCTGTATCTTGGAACCCCCCAACTGCCAGGTTCAACCATGCA  Raphanus raphanistrum subsp. maritimus
EX746876       <-- ATAAGCTTCGTGCATCTTGGAACCCCCCAACTGCCAGGTTCAACCATGCA  Raphanus raphanistrum subsp. maritimus
FD544119       <-- ATAAGCTTCTTGTATCTTGGAACCCCC-TACTGCCAGGTTCAACCATGCA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX749654       <-- ATAAGCTTCCTGTATCTTGGAACCCCC-AACTGCCAGGTTCAACCATGCA  Raphanus raphanistrum subsp. maritimus
EW723337       <-- ATAAGCTTCCTGTATCTTGGACCCCCC-TACTGCCAGGTTCAACCATGCA  Raphanus sativus cv Early Scarlet Globe
EX764353       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX751187       --> ATAAGCTTCCTGCATCTTGGAACCCCC-AACTGCCAGGTTCAACCATGCA  Raphanus raphanistrum subsp. maritimus
EX768969       --> ATAAGCTTCTTGTATCTTGGAACCCCC-TACTGCCAGGTTCAACCATGCA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD552737       --> ATAAGCTTCCTGTATCTTGGAACCCCC-AACTGCCAGGTTCAACCATGCA  Raphanus raphanistrum subsp. landra
EW728400       --> ATAAGCTTCCTGTATCTTGGACCCCCC-TACTGCCAGGTTCAACCATGCA  Raphanus sativus cv Early Scarlet Globe
EY942933       --> ATAAGCTTCCTGTATCTTGGACCCCCC-TACTGCCAGGTTCAACCATGCA  Raphanus sativus cv Rat-Tail Radish #3870
FD529323       --> ATAAGCTTCCTGTATCTTGGAACCCCC-AACTGCCAGGTTCAACCATGCA  Raphanus raphanistrum subsp. maritimus
FD977091       --> ATAAGCTTCTTGTATCTTGGAACCCCC-TACTGCCAGGTTCAACCATGCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV570896       --> ATAAGCTTCCTGTATCTTGGAACCCCC-AACTGCCAGGTTCAACCATGCA  Raphanus raphanistrum subsp. landra
EV570897       --> ATAAGCTTCCTGTATCTTGGAACCCCC-AACTGCCAGGTTCAACCATGCA  Raphanus raphanistrum subsp. landra
FD974940       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD974895       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EW728779       --> ATAAGCTTCTTGTATCTTGGAACCCCC-TACTGCCAGGTTCAACCATGCA  Raphanus sativus cv Early Scarlet Globe
FD983017       --> ATAAGCTTCCTGTATCTTGGAACCCCC-AACTGCCAGGTTCAACCATGCA  Raphanus raphanistrum subsp. landra
EW727679       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EX768698       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EW736756       --> ATAAGCTTCCTGTATCTTGGACCCCCC-TACTGCCAGGTTCAACCATGCA  Raphanus sativus cv Rat-Tail Radish #3870
EX753294       --> ATAAGCTTCCTGTATCTTGGAACCCCC-AACTGCCAGGTTCAACCATGCA  Raphanus raphanistrum subsp. maritimus
FD975818       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY909869       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX774835       --> ..................................................  Raphanus raphanistrum subsp. landra

               601    -    651
UN21547        --> CTGGCGAGTTGAGTGAGAGTGTGGTCTTCATCAAACTGTTGCATCACTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW723387       <-- ..................................................
EX896617       <-- CTGGCGAGTTGAGTGAGTGTGc............................
FD986850       <-- CTGGCGAGTTGAGTGAGAGTGTGGTCTTCATCAAACTGTTGCATCACTCT
FD979839       <-- ..................................................
EV527342       <-- CTGGCGAGTTGAGTGAGAGTGTGGTCTTCATCAAACTGTTGCATCACTCT
FD533015       <-- CTGGCGAGTTGAGTGAGAGTGTGGTCTTCATCAAACTGTTGCATCACTCT
EX746876       <-- CTGGCGAGTTGAGTGAGAGTGTGGTCTTCACCAAACTGTTGCATCACTCT
FD544119       <-- CTCGCGAGTTGAGTGAGAGTGTGGTCCTCATCAAACTGTTGCATCACTCT
EX749654       <-- CTGGCGAGTTGAGTGAGAGTGTGGTCTTCATCAAACTGTTGCATCACTCT
EW723337       <-- CTGGCGAGTTGAGTGAGAGTGTGGTCTTCATCAAACTGTTGCATCACTCT
EX764353       <-- ..................................................
EX751187       --> CTGGCGAGTTGAGTGAGAGTGTGGTCTTCACCAAACTGTTGCATCACTCT
EX768969       --> CTGGCGAGTTGAGTGAGTGTGTGGTCTTCATCAAACTGTTGCATCACTCT
FD552737       --> CTGGCGAGTTGAGTGAGAGTGTGGTCTTCATCAAACTGTTGCATCACTCT
EW728400       --> CTGGCGAGTTGAGTGAGAGTGTGGTCTTCATCAAACTGTTGCATCACTCT
EY942933       --> CTGGCGAGTTGAGTGAGAGTGTGGTCTTCATCAAACTGTTGCATCACTCT
FD529323       --> CTGGCGAGTTGAGTGAGAGTGTGGTCTTCATCAAACTGTTGCATCACTCT
FD977091       --> CTGGCGAGTTGAGTGAGTGTGTGGTCTTCATCAAACTGTTGCATCACTCT
EV570896       --> CTGGCGAGTTGAGTGAGAGTGTGGTCTTCATCAAACTGTTGCATCACTCT
EV570897       --> CTGGCGAGTTGAGTGAGAGTGTGGTCTTCATCAAACTGTTGCATCACTCT
FD974940       --> ..................................................
FD974895       --> ..................................................
EW728779       --> CTGGCGAGTTGAGTGAGTGTGTGGTCTTCATCAAACTGTTGCATCACTCT
FD983017       --> CTGGCGAGTTGAGTGAGAGTGTGGTCTTCATCAAACTGTTGCATCACTCT
EW727679       --> ..................................................
EX768698       --> ..................................................
EW736756       --> CTGGCGAGTTGAGTGAGAGTGTGGTCTTCATCAAACTGTTGCATCACTCT
EX753294       --> CTGGCGAGTTGAGTGAGAGTGTGGTCTTCATCAAACTGTTGCATCACTCT
FD975818       --> ..................................................
EY909869       --> ..................................................
EX774835       --> ..................................................

               651    -    701
UN21547        --> CAGCTGTTTCTCAGCATAATCTGACCTGTGCATCTTTATGAATATCTGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW723387       <-- ..................................................
EX896617       <-- ..................................................
FD986850       <-- CAGCTGTTTCTCAGCATAATCTGACCTGTGCATCTTTATGAATATCTGGA
FD979839       <-- ..................................................
EV527342       <-- CAGCTGTTTCTCAGCATAATCTGACCTGTGCATCTTTATGAATATCTGGA
FD533015       <-- CAGCTGTTTCTCAGCATAATCTGACCTGTGCATCTTTATGAATATCTGGA
EX746876       <-- CAGCTGTTTCTCAGCATAATCTGACCTGTGCATCTTTATGAATATCTGGA
FD544119       <-- CAGCTGTTTCTCAGCATAATCTGACCTGTGCATCTTTATGAATATCTGGA
EX749654       <-- CAGCTGTTTCTCAGCATAATCTGACCTGTGCATCTTTATGAATATCTGGA
EW723337       <-- CAGCTGTTTCTCAGCATAATCTGACCTGTGCATCTTTATGAATATCTGGA
EX764353       <-- ....TGTTTCTCAGCATAATCTGACCTGTGCATCTTTATGAATATCTGGA
EX751187       --> CAGCTGTTTCTCAGCATAATCTGACCTGTGCATCTTTATGAATATCTGGA
EX768969       --> CAGCTGTTTCTCGGCATAATCTGGCCTGTGCATCCTTATGAATATCTGGA
FD552737       --> CAGCTGTTTCTCAGCATAATCTGACCTGTGCATCTTTATGAATATCTGGA
EW728400       --> CAGCTGTTTCTCAGCATAATCTGACCTGTGCATCTTTATGAATATCTGGA
EY942933       --> CAGCTGTTTCTCAGCATAATCTGACCTGTGCATCTTTATGAATATCTGGA
FD529323       --> CAGCTGTTTCTCAGCATAATCTGACCTGTGCATCTTTATGAATATCTGGA
FD977091       --> CAGCTGTTTCTCAGCATAATCTGGCCTGTGCATCTTTATGAATATCTGGA
EV570896       --> CAGCTGTTTCTCAGCATAATCTGACCTGTGCATCTTTATGAATATCTGGA
EV570897       --> CAGCTGTTTCTCAGCATAATCTGACCTGTGCATCTTTATGAATATCTGGA
FD974940       --> ..................................................
FD974895       --> ..................................................
EW728779       --> CAGCTGTTTCTCAGCATAATCTGACCTGTGCATCTTTATGAATATCTGGA
FD983017       --> CAGCTGTTTCTCAGCATAATCTGACCTGTGCATCTTTATGAATATCTGGA
EW727679       --> ..................................................
EX768698       --> ..................................................
EW736756       --> CAGCTGTTTCTCAGCATAATCTGACCTGTGCATCTTTATGAATATCTGGA
EX753294       --> CAGCTGTTTCTCAGCATAATCTGACCTGTGCATCTTTATGAATATCTGGA
FD975818       --> ..................................................
EY909869       --> ..................................................
EX774835       --> ..................................................

               701    -    751
UN21547        --> CATTCAAAGCATGCAGGTCCATGGTTCCTCCAGAATGAGTGTGCTTAAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW723387       <-- ..................................................
EX896617       <-- ..................................................
FD986850       <-- CATTCAAAGCATGCAGGTCCc.............................
FD979839       <-- ..................................................
EV527342       <-- CATTCAAAGCATGCAGGTCCATGGTTCCTCCAGAATGAGTGTGCTTAAGA
FD533015       <-- CATTCAAAGCATGCAGGTCCATGGTTCCTCCAGAATGAGTGTGCTTAAGA
EX746876       <-- CATTCAAAGCATGCAGGTCCATGGTTCCTCCAGAATGAGTGTGCTTAAGA
FD544119       <-- CATTCAAAGCATGCAGGTCCATGGTTCCTCCAGAATGAGTGTGCTTAAGA
EX749654       <-- CATTCAAAGCATGCAGGTCCATGGTTCCTCCAGAATGAGTGTGCTTAAGA
EW723337       <-- CATTCAAAGCATGCAGGTCCATGGTTCCTCCAGAATGAGTGTGCTTGAGA
EX764353       <-- CATTCAAAGCATGCAGGTCCATGGTTCCTCCAGAATGAGTGTGCTTAAGA
EX751187       --> CATTCAAAGCATGCAGGTCCATGGTTCCTCCAGAATGAGTGTGCTTAAGA
EX768969       --> CATTCAAAGCAT......................................
FD552737       --> CATTCAAAGCATGCAG-TCCATGGTTCCT.....................
EW728400       --> CATTCAAAGCA.......................................
EY942933       --> CATTCAAAGCAT......................................
FD529323       --> CATTCAAAGCAT......................................
FD977091       --> CATTCAAAGCATG.....................................
EV570896       --> CATTCAAAGCATGCAGGTCCATGGTTCCCCCAGAATGAGTGTGCTTAAGA
EV570897       --> CATTCAAAGCATGCAGGTCCATGG..........................
FD974940       --> ..................................................
FD974895       --> ..................................................
EW728779       --> CATTCAAAGCATGCAGGTCCATAGTTCCTCCAGAATGAGTGTGCTTGAGA
FD983017       --> CATTCAAAGCATGCAGGTCCc.............................
EW727679       --> ..................................................
EX768698       --> ..................................................
EW736756       --> CATTCAAAGCATGCAGGTCCATGGTTCCTCCAGAATGAGTGTGCTTGAGA
EX753294       --> CATTCAAAGCATGCAGGTCCATGGTTCCTCCAGAATGAGTGTGCTTAAGA
FD975818       --> ..................................................
EY909869       --> ..................................................
EX774835       --> ..................................................

               751    -    801
UN21547        --> GCCTCGCTATAGTCTTCCTCATGCATGAAGATAGTACCAGCAATCAACCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW723387       <-- ..................................................
EX896617       <-- ..................................................
FD986850       <-- ..................................................
FD979839       <-- ..................................................
EV527342       <-- GCCTCGCTATAGTCTTCCTCATGCATGAAGATAGTACCAGCAATCAACCT
FD533015       <-- GCCTCGCTATAGTCTTCCTCATGCATGAAGATAGTACCAGCAATCAACCT
EX746876       <-- GCCTCGCTATAGTCTTCCTCATGCATGAAGATAGTACCAGCAATCAACCT
FD544119       <-- GCCTCGCTATAGTCTTCCTCATGCATGAAGATCGTACCAGCAATCAACCT
EX749654       <-- GCCTCGCTATAGTCTTCCTCATGCATGAAGATAGTACCAGCAATCAACCT
EW723337       <-- GCCTCGCTATAGTCTTCCTCATGCATGAAGATAGTACCAGCAATCAACCT
EX764353       <-- GCCTCGCTAT........................................
EX751187       --> GCCTCGCTATAGTCTTCCTCATGCATGAAGATAGTACCAGCA-TCAACCT
EX768969       --> ..................................................
FD552737       --> ..................................................
EW728400       --> ..................................................
EY942933       --> ..................................................
FD529323       --> ..................................................
FD977091       --> ..................................................
EV570896       --> GCCTCGCTATAGTCTTCCTCATGCATGAAGATAGTACCAGCAATCAACCT
EV570897       --> ..................................................
FD974940       --> ..................................................
FD974895       --> ..................................................
EW728779       --> GCCTCGCTATAGTCTTCCTCATGCATGAAGATAGTACCAGCAATCAACCT
FD983017       --> ..................................................
EW727679       --> ..................................................
EX768698       --> ..................................................
EW736756       --> GCCTCGCTATAGTCTTCCTCATGCATGAAGATAGTACCAGCAATCAACCT
EX753294       --> GCCTCGCTATAGTCTTCCTCATGCATGAAGATAGTACCAGCAATCAACCT
FD975818       --> ..................................................
EY909869       --> ..................................................
EX774835       --> ..................................................

               801    -    851
UN21547        --> AACAGTAGCATTGTTTCCACCAGTTGGATCTGCCAACCATTCCCTCAAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW723387       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EX896617       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD986850       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD979839       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV527342       <-- AACAGTAGCATTGTTTCCACCAGTTGGATCTGCCAACCATTCCCTCAAGC  Raphanus raphanistrum subsp. maritimus
FD533015       <-- AACAGTAGCATTGTTTCCACCAGTTGGATCTGCCAACCATTCCCTCAAGC  Raphanus raphanistrum subsp. maritimus
EX746876       <-- AACAGTAGCATTGTTTCCACCAGTTGAATCTGCCAACCATTCCCTCAAGC  Raphanus raphanistrum subsp. maritimus
FD544119       <-- AACAGTAGCATTGTTTCCAGCAGTTGGATCTGCCAACCACTCCCTCAAGC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX749654       <-- AACAGTAGCATTGTTTCCACCAGTTGGATCTGCCAACCGTTCCCTCAAGC  Raphanus raphanistrum subsp. maritimus
EW723337       <-- AACAGTAGCATTGTTTCCAGCAGTTGGATCTGCCAACCATTCCCTCAAGC  Raphanus sativus cv Early Scarlet Globe
EX764353       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX751187       --> AACAGTAGCATTGTTTCCACCAGTTG-ATCTGCCAAC-ATTCCCTCA-GC  Raphanus raphanistrum subsp. maritimus
EX768969       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD552737       --> ..................................................  Raphanus raphanistrum subsp. landra
EW728400       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EY942933       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD529323       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD977091       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV570896       --> AACAGTAGCATTGTTT..................................  Raphanus raphanistrum subsp. landra
EV570897       --> ..................................................  Raphanus raphanistrum subsp. landra
FD974940       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD974895       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EW728779       --> AACAGTAGCATTGTTTCCAGCAGTTGGATCTGCCAACCGTTCCCTCAAGC  Raphanus sativus cv Early Scarlet Globe
FD983017       --> ..................................................  Raphanus raphanistrum subsp. landra
EW727679       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EX768698       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EW736756       --> AACAGTAGCATTGTTTCCAGCAGTTGGATCTGCCAACCATTCCCTCAAGC  Raphanus sativus cv Rat-Tail Radish #3870
EX753294       --> AACAGTAGCATTGTTTCCACCAGTTGGATCTGCCAACCGTTCCCTCA-GC  Raphanus raphanistrum subsp. maritimus
FD975818       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY909869       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX774835       --> ..................................................  Raphanus raphanistrum subsp. landra

               851    -    901
UN21547        --> TAGCAATGGTTGATTCCTTATTTTCAGGGCTCGATAGATACATAGCGAGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW723387       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EX896617       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD986850       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD979839       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV527342       <-- TAGCAATGGTTGATTCCTTATTTTCAGGGCTCGATAGATACATAGCGAGG  Raphanus raphanistrum subsp. maritimus
FD533015       <-- TAGCAATGGTTGATTCCTTATTTTCAGGGCTCGATAGATACATAGCGAGG  Raphanus raphanistrum subsp. maritimus
EX746876       <-- TAGCAATGGTTGATTCCTTATTTTCAGGGCTCGATAGATACATAGCGAGG  Raphanus raphanistrum subsp. maritimus
FD544119       <-- TAGCAATCGTTGATTCCTTATTTTCAGGACTAGATAGATACATAGCGAGG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX749654       <-- TAGCAATGGTTGATTCCTTATTTTCAGGGCTCGATAGATACATAGCGAGG  Raphanus raphanistrum subsp. maritimus
EW723337       <-- TAGCAATCGTTGATTCCTTATTTTCAGGGCTCGATAGATACATAGCGAGG  Raphanus sativus cv Early Scarlet Globe
EX764353       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX751187       --> TAG...............................................  Raphanus raphanistrum subsp. maritimus
EX768969       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD552737       --> ..................................................  Raphanus raphanistrum subsp. landra
EW728400       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EY942933       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD529323       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD977091       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV570896       --> ..................................................  Raphanus raphanistrum subsp. landra
EV570897       --> ..................................................  Raphanus raphanistrum subsp. landra
FD974940       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD974895       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EW728779       --> TAGCAATCGTTGATTCCTTATTT...........................  Raphanus sativus cv Early Scarlet Globe
FD983017       --> ..................................................  Raphanus raphanistrum subsp. landra
EW727679       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EX768698       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EW736756       --> TAGCAATCGTTGATTCCTTATTT...........................  Raphanus sativus cv Rat-Tail Radish #3870
EX753294       --> TAGCAATGGTTGATTCCTTATTT...........................  Raphanus raphanistrum subsp. maritimus
FD975818       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY909869       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX774835       --> ..................................................  Raphanus raphanistrum subsp. landra

               901    -    951
UN21547        --> AGCTTCACTGCTTGAAGAGGAGTAGCCGACGCTTCGTCGATCTCATTGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW723387       <-- ..................................................
EX896617       <-- ..................................................
FD986850       <-- ..................................................
FD979839       <-- ..................................................
EV527342       <-- AGCTTCACTGCTTGAAGAGGAGTAGCCGACGCTTCGTCGATCTCATTGAT
FD533015       <-- AGCTTCACTGCTTGAAGAGGAGTAGCCGACGCTTCGTCGATCTCATTGAT
EX746876       <-- AGCTTCACTGCTTGAAGAGGAGTAGCCGACGCTTCGTCGATCTCATTGAT
FD544119       <-- AGCTTGACTGCCTGAAGAGGAGTAGCCGACGCTTCGTCGATCTCATTAAT
EX749654       <-- AGCTTCACTGCTTGAAGAGGAGTAGCCGACGCTTCGTCGATCTCATTGAT
EW723337       <-- AGCTTCACTGCCTGAAGAGGAGTAGCCGACGCTTCGTCGATCTCATTGAT
EX764353       <-- ..................................................
EX751187       --> ..................................................
EX768969       --> ..................................................
FD552737       --> ..................................................
EW728400       --> ..................................................
EY942933       --> ..................................................
FD529323       --> ..................................................
FD977091       --> ..................................................
EV570896       --> ..................................................
EV570897       --> ..................................................
FD974940       --> ..................................................
FD974895       --> ..................................................
EW728779       --> ..................................................
FD983017       --> ..................................................
EW727679       --> ..................................................
EX768698       --> ..................................................
EW736756       --> ..................................................
EX753294       --> ..................................................
FD975818       --> ..................................................
EY909869       --> ..................................................
EX774835       --> ..................................................

               951    -   1001
UN21547        --> GACAAGCTGGTAGCTACCAAGAGCGATGTAAGCGCGGTGGACGAGGCAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW723387       <-- ..................................................
EX896617       <-- ..................................................
FD986850       <-- ..................................................
FD979839       <-- ..................................................
EV527342       <-- GACAAGCTGGTAGCTACCAAGAGCGATGTAAGCGCGGTGGACGAGGCAAT
FD533015       <-- GACAAGCTGGTAGCTACCAAGAGCGATGTAAGCGCGGTGGACGAGGCAAT
EX746876       <-- GACAAGCTGGTAGCTACCAAGAGCGATGTAAGCGCGGTGGACGAGGCAAT
FD544119       <-- GACAAGCTGGTAGCTACCAAGAGCGATGTAAGCGCGGTGGACGAGGCAAT
EX749654       <-- GACAAGCTGGTAGCTACCAAGAGCGATGTAAGCGCGGTGGACGAGGCAAT
EW723337       <-- GACAAGCTGGTAGCTACCAAGAGCGATGTAAGCGCGGTGGACGAGGCAAT
EX764353       <-- ..................................................
EX751187       --> ..................................................
EX768969       --> ..................................................
FD552737       --> ..................................................
EW728400       --> ..................................................
EY942933       --> ..................................................
FD529323       --> ..................................................
FD977091       --> ..................................................
EV570896       --> ..................................................
EV570897       --> ..................................................
FD974940       --> ..................................................
FD974895       --> ..................................................
EW728779       --> ..................................................
FD983017       --> ..................................................
EW727679       --> ..................................................
EX768698       --> ..................................................
EW736756       --> ..................................................
EX753294       --> ..................................................
FD975818       --> ..................................................
EY909869       --> ..................................................
EX774835       --> ..................................................

               1001   -   1051
UN21547        --> CGCGCTCGATGATATCTTCCTGCGAAAGATTAGGGATCTCGCTGTTGTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW723387       <-- ..................................................
EX896617       <-- ..................................................
FD986850       <-- ..................................................
FD979839       <-- ..................................................
EV527342       <-- CGCGCTCGATGATATCTTCCTGCGAAAGATTAGGGATCTCGCTGTTGTTG
FD533015       <-- CGCGCTCGATGATATCTTCCTGCGAAAGATTAGGGATCTCGCTGTTGTTG
EX746876       <-- CGCGCTCGATGATATCTTCCTGCGAAAGATTAGGGATCTCGCTGTTGTTG
FD544119       <-- CGCGCTCGATGATATCTTCCTGCGAAAGATTAGGGATCTCGCTGTTGTTG
EX749654       <-- CGCGCTCGATGATATCTTCCTGCGAAAGATTAGGGATCTCGCTGTTGTTG
EW723337       <-- CGCGCTCGATGATATCTTCCTGCGAAAGATTAGGGATCTCGCTGTTGTTG
EX764353       <-- ..................................................
EX751187       --> ..................................................
EX768969       --> ..................................................
FD552737       --> ..................................................
EW728400       --> ..................................................
EY942933       --> ..................................................
FD529323       --> ..................................................
FD977091       --> ..................................................
EV570896       --> ..................................................
EV570897       --> ..................................................
FD974940       --> ..................................................
FD974895       --> ..................................................
EW728779       --> ..................................................
FD983017       --> ..................................................
EW727679       --> ..................................................
EX768698       --> ..................................................
EW736756       --> ..................................................
EX753294       --> ..................................................
FD975818       --> ..................................................
EY909869       --> ..................................................
EX774835       --> ..................................................

               1051   -   1101
UN21547        --> ATCGCCGCTTGATACGCACCTAGGTAAAAACTGTTTCTCAGATTAAAGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW723387       <-- ..................................................
EX896617       <-- ..................................................
FD986850       <-- ..................................................
FD979839       <-- ..................................................
EV527342       <-- ATCGCCGCTTGATACGCACCTAGGTAAAAACTGTTTCTCAGATTAAAGAG
FD533015       <-- ATCGCCGCTTGATACGCACCTAGGTAAAAACTGTTTCTCAGATTAAAGAG
EX746876       <-- ATCGCCGCTTGATACGCACCTAGGTAAAAACTGTTTCTCAGATTAAAGAG
FD544119       <-- ATCGCCGCTTGATACGCACCTAGGTAGAAACTGTTTCTCAGATTAAAGAG
EX749654       <-- ATCGCCGCTTGATACGCACCTAGGTAAAAACTGTTTCTCAGATTAAAGAG
EW723337       <-- ATCGCCGCTTGATACGCACCTAGGT.........................
EX764353       <-- ..................................................
EX751187       --> ..................................................
EX768969       --> ..................................................
FD552737       --> ..................................................
EW728400       --> ..................................................
EY942933       --> ..................................................
FD529323       --> ..................................................
FD977091       --> ..................................................
EV570896       --> ..................................................
EV570897       --> ..................................................
FD974940       --> ..................................................
FD974895       --> ..................................................
EW728779       --> ..................................................
FD983017       --> ..................................................
EW727679       --> ..................................................
EX768698       --> ..................................................
EW736756       --> ..................................................
EX753294       --> ..................................................
FD975818       --> ..................................................
EY909869       --> ..................................................
EX774835       --> ..................................................

               1101   -   1151
UN21547        --> GTGATCTGGTCCTGCCGCCATGGATGCCATTCTGCTCGTCTTCTTCCTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW723387       <-- ..................................................
EX896617       <-- ..................................................
FD986850       <-- ..................................................
FD979839       <-- ..................................................
EV527342       <-- GTGATCTGGTCCTGCCGCCATGGATGCCATTCTGCTCGTCTTCTTCCTCT
FD533015       <-- GTGATCTGGTCCTGCCGCCATGGATGCCATTCTGCTCGTCTTCTTCCTCT
EX746876       <-- GTGATCTGGTCCTGCCGCCATGGATGCCATTCTGCTCGTCTTCTTCCTCT
FD544119       <-- GTGATCCGGTCCTGCCGCCATGGATGCCATTCTGCTCGTCTTCTTCCTCT
EX749654       <-- GTGATCTGGTCCTGCCGCCATGGATGCCATTCTGCTCGTCTTCTTCCTCT
EW723337       <-- ..................................................
EX764353       <-- ..................................................
EX751187       --> ..................................................
EX768969       --> ..................................................
FD552737       --> ..................................................
EW728400       --> ..................................................
EY942933       --> ..................................................
FD529323       --> ..................................................
FD977091       --> ..................................................
EV570896       --> ..................................................
EV570897       --> ..................................................
FD974940       --> ..................................................
FD974895       --> ..................................................
EW728779       --> ..................................................
FD983017       --> ..................................................
EW727679       --> ..................................................
EX768698       --> ..................................................
EW736756       --> ..................................................
EX753294       --> ..................................................
FD975818       --> ..................................................
EY909869       --> ..................................................
EX774835       --> ..................................................

               1151   -   1201
UN21547        --> AGATCTCACAGATCTCCC
                   ~~~~~~~~~~~~~~~~~~
EW723387       <-- ..................
EX896617       <-- ..................
FD986850       <-- ..................
FD979839       <-- ..................
EV527342       <-- AGATCTCACAGATCTCC.
FD533015       <-- AGATCTCACAGATCTC..
EX746876       <-- AGATCTCACAGATCTCCC
FD544119       <-- AGATCTCACAGATCTCC.
EX749654       <-- AGATCTCACAGATCTCC.
EW723337       <-- ..................
EX764353       <-- ..................
EX751187       --> ..................
EX768969       --> ..................
FD552737       --> ..................
EW728400       --> ..................
EY942933       --> ..................
FD529323       --> ..................
FD977091       --> ..................
EV570896       --> ..................
EV570897       --> ..................
FD974940       --> ..................
FD974895       --> ..................
EW728779       --> ..................
FD983017       --> ..................
EW727679       --> ..................
EX768698       --> ..................
EW736756       --> ..................
EX753294       --> ..................
FD975818       --> ..................
EY909869       --> ..................
EX774835       --> ..................