Library    |     Search    |     Batch query    |     SNP    |     SSR  

Alignment for radish unigene UN21553

               1      -     51
UN21553        --> AACAACGTGGATGTTAGGAGATTGCATTATATACTATTGATTTACAATAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX765453       <-- ..................................................
EV569643       <-- ..................................................
FD578825       <-- ..................................................
EV550541       <-- ..................................................
EX769969       <-- ..................................................
FD989343       <-- ..................................................
EV545821       --> AACAACGTGGATGTTAGGAGATTGCATTATATACTATTGATTTACAATAG
EX769244       --> ........GGATGTTAGGAGATTGCATTATATACTATTGATTTACAATAG
EX774217       --> ...........cGTTAGGAGATTGCATTATATACTATTGATTTAAAATAG
FD582917       --> ..................................................
FD985136       --> ..................................................
EV574138       --> ..................................................

               51     -    101
UN21553        --> TGTTCATGCCTTATTATATAGACTAGCTTTAAACCCAAAAGTACTTGCAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX765453       <-- ..................................................
EV569643       <-- ..................................................
FD578825       <-- ..................................................
EV550541       <-- ..................................................
EX769969       <-- ..................................................
FD989343       <-- ..................................................
EV545821       --> TGTTCATGCCTTATTATATAGACTAGCTTTAAACCCAAAAGTACTTGCAT
EX769244       --> TGTTCATGCCTTATTATATAGACTAGCTTTAAACCCAAAAGTACTTGCAT
EX774217       --> TGTTCATGCCTTATTATATAGACTAGCTTTAAACCCAAAAGTACTTGCAT
FD582917       --> ......TGCCTTATTATATAAACTAGCTTTAAACCCAAAAGTACTTGCAT
FD985136       --> ..................................................
EV574138       --> ..................................................

               101    -    151
UN21553        --> GTGAAAGTGTAAGACAAAAGAATAAGATTGCTAAACAGACGGACATATGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX765453       <-- ..................................................
EV569643       <-- ..................................................
FD578825       <-- ..................................................
EV550541       <-- ..................................................
EX769969       <-- ..................................................
FD989343       <-- ..................................................
EV545821       --> GTGAAAGTATAAGACAAAAGAATAAGATTGCTAAACAGACGGACACATGT
EX769244       --> GTGAAAGTATAAGACAAAAGAATAAGATTGCTAAACAGACGGACACATGT
EX774217       --> GTGAAAGTGTAAGACAAAAGAATAAGATTGCTAAACAGACGGACATATGT
FD582917       --> GTGAAAGTGTAAAACAAAAAAATAAAATTGCTAAACAGACGGACATATGT
FD985136       --> ..................................................
EV574138       --> ..................................................

               151    -    201
UN21553        --> GGTTGAGCGCAAAAGGAGGAGATGATATCGAGCCATCGAGAATGGCCGTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX765453       <-- ..................................................
EV569643       <-- ..................................................
FD578825       <-- ..................................................
EV550541       <-- ..................................................
EX769969       <-- ..................................................
FD989343       <-- ..................................................
EV545821       --> GGTTGAGCACAAAAGGAGGAGATGATATCGAGCCATCGAGAATGGCCGTC
EX769244       --> GGTTGAGCACAAAAGGAGGAGATGATATCGAGCCATCGAGAATGGCCGTC
EX774217       --> GGTTGAGCGCAAAAGGAGGAGATGATATCGGGCCATCGAGAATGGCCGTC
FD582917       --> GGTTGAGCGCAAAAGGAGGAAATGATATCGAGCCATCGAGAATGGCCGTC
FD985136       --> ..................................................
EV574138       --> ..................................................

               201    -    251
UN21553        --> AAAATGCGGTGGTTTGCAGCCTCCGTAGCGTGAATTCCGTCCCAACTCAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX765453       <-- ..................................................
EV569643       <-- ..................................................
FD578825       <-- ..................................................
EV550541       <-- ..................................................
EX769969       <-- ..................................................
FD989343       <-- ..................................................
EV545821       --> AAAATGCGGTGGTTTGCAGCCTCCGTAGCGTGAATTCCGTCCCAACTCAC
EX769244       --> AAAATGCGGTGGTTTGCAGCCTCCGTAGCGTGAATTCCGTCCCAACTCAC
EX774217       --> AAAATGCGGTGGTTTGCAGCCTCCGTAGCGTGAATTCCGTCCCAACTCAC
FD582917       --> AAAATGCGGTGGTTTGCAGCCTCCGTAGCGTGAATTCCGTCCCAACTCAC
FD985136       --> ..................................................
EV574138       --> ..................................................

               251    -    301
UN21553        --> GTAGTTTTGTGGATCACGGCAAGCCTTGGCCGTCACTGAAGAATTTCCGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX765453       <-- ..................................................
EV569643       <-- ..................................................
FD578825       <-- ..................................................
EV550541       <-- ..................................................
EX769969       <-- ..................................................
FD989343       <-- ..................................................
EV545821       --> ATAGTTTTGCGGATCACGGCAAGCCTTGGCCGTCACAGAAAAATTTCCGA
EX769244       --> ATAGTTTTGCGGATCACGGCAAGCCTTGGCCGTCACAGAAGAATTTCCGA
EX774217       --> GTAGTTTTGTGGATCACGGCAAGCCTTGGCCGTCACTGAAGAATTTCCGA
FD582917       --> GTAGTTTTGTGGATCACGGCAAGCCTTGGCCGTCACT-AAAAATTTCCAA
FD985136       --> ..................................................
EV574138       --> ..................................................

               301    -    351
UN21553        --> TTACTTTTGTGGTGCCGCAAAATAACTTCTGATTGAAGTTGTACGGGCGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX765453       <-- ..................................................
EV569643       <-- ..................................................
FD578825       <-- ..................................................
EV550541       <-- ..................................................
EX769969       <-- ..................................................
FD989343       <-- ..................................................
EV545821       --> TCACTTTTGTGGTGCCGCAAAATAACTTCTGATTGAAGTTGTACGGGCGT
EX769244       --> TCACTTTTGTGGTGCCGCAAAATAACTTCTGATTGAAGTTGTACGGGCGT
EX774217       --> TTACTTTTGTGGTGCCGCAAAATAACTTCTGATCGAAGTTGTACGGACGT
FD582917       --> TTACTTTTGTGGTGCCGCAAAATAACTTCTGATCGAAGTTGTACGGACGT
FD985136       --> ..................................................
EV574138       --> ..................................................

               351    -    401
UN21553        --> CCACCGTACCCACAACAAGCTTTAATACCGTGTTTCATTCCATAGGATTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX765453       <-- ..................................................
EV569643       <-- ..................................................
FD578825       <-- ..................................................
EV550541       <-- ..................................................
EX769969       <-- ..................................................
FD989343       <-- ..................................................
EV545821       --> CCACCGTACCCACAACAAGCTTTAATACCGTGTTTCATACCATAGGATTT
EX769244       --> CCACCGTACCCACAACAAGCTTTAATACCGTGTTTCATACCATAGGATTT
EX774217       --> CCACCGTACCCACAACAAGCTTTAATACCGTGTTTCATTCCATAGGATTT
FD582917       --> CCACCGTACCCACAACAAGCTTTAATACCGTGTCTCATTCCATAGGATTT
FD985136       --> ..................................................
EV574138       --> ..................................................

               401    -    451
UN21553        --> GGGGTGTTGAAAAAGGTCGAGCAGTGTTTTGTGAGTGTCTAAATATATAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX765453       <-- ..................................................
EV569643       <-- ..................................................
FD578825       <-- ..................................................
EV550541       <-- ..................................................
EX769969       <-- ..................................................
FD989343       <-- ..................................................
EV545821       --> GGGGTGTTGAAAAAGGTCGAGCAGTGTTTTGTGAGTGTCTAAATATATAA
EX769244       --> GGGGTGTTGAAAAAGGTCGAGCAGTGTTTTGTGAGTGTCTAAATATATAA
EX774217       --> GGGGTGTTGAAAAAGGTCGAGCAGTGTTTTGTGAGTGTCTAAATATATAA
FD582917       --> GGGGTGTTGAAAAAGGTCGAGCAGTGTTTTGTGCGTGTCTAAATATATAA
FD985136       --> ............................................ATATAA
EV574138       --> ..................................................

               451    -    501
UN21553        --> TGGTAGCGTTTTTCAATTCGGTTCTTGTCTCAAATAATGTCTTCTTCAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX765453       <-- ..................................................
EV569643       <-- ..................................................
FD578825       <-- ..................................................
EV550541       <-- ..................................................
EX769969       <-- ..................................................
FD989343       <-- ..................................................
EV545821       --> TGGCAGCGTTTTTCAATTCGGTTCTTGTCTCAGATAATGTCTTCTTCAAT
EX769244       --> TGGCAGCGTTTTTCAATTCGGTTCTTGTCTCAAATAATGTCTTCTTCAAT
EX774217       --> TGGTAGCGTTTTTCAATTCGGTTCTTGTCTCAAATAATGTCTTTTTCAAT
FD582917       --> TGGTAGCGTTTTTCAATTCGGTTCTTGTCTCAAATAATGTCTTCTTCAAT
FD985136       --> TGGTAGCGTTTTTCAATTCGGTTCTTGTCTCAAATAATGTCTTTTTCAAT
EV574138       --> ..................................................

               501    -    551
UN21553        --> AATGAATTGTAATATTCGACAGCTTTGTTTACTGGAATGAGACATCCGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX765453       <-- ..................................................
EV569643       <-- ..................................................
FD578825       <-- ..................................................
EV550541       <-- ..................................................
EX769969       <-- ..................................................
FD989343       <-- ..................................................
EV545821       --> AATGAATTGTAATATTCGACAGCTTTGTTTACTGGAATGAGACATCCGAA
EX769244       --> AATGAATTGTAATATTCGACAGCTTTGTTTACTGGAATGAGACATCCGAA
EX774217       --> AATGAATTGTAGTACTCGACAGCTTTGTTTACTGGAATGAGACATCCGAA
FD582917       --> AATGAATTGTAATATTCGACAGCTTTGTTTACTGGAATGAGACATCCGAA
FD985136       --> AATGAATTGTAGTACTCGACAGCTTTGTTTACTGGAATGAGACATCCGAA
EV574138       --> ..................................................

               551    -    601
UN21553        --> TTTGTCTAAATCCGAATTGGAATGAGTGTAACCGGTTAATATCGCCGGGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX765453       <-- TTTGTCTAAATCCGAATTGGAATGAGTGTAACCGGTTAATATCGCCGGGT
EV569643       <-- ................TTGGAATGAGTGTAACCGGTTAGTATCGCCGGGT
FD578825       <-- .................TGGAATGAGTGTAACCGGTTAATATCGCCGGGT
EV550541       <-- ...................GAATGAGTGTAACCGGTTAATATCGCCGGGT
EX769969       <-- ..................................................
FD989343       <-- ..................................................
EV545821       --> TTTGTCTAAATCCGAATTGGAATGAGTGTAACCGGTTAATATCGCCGGGT
EX769244       --> TTTGTCTAAATCCGAATTGGAATGAGTGTAACCGGTTAATATCGCCGGGT
EX774217       --> TTTGTCTAAATCCGAATTGGAATGAGTGTAACCGGTTAGTATCGCCGGGT
FD582917       --> TTTGTCTAAATCCGAATTGGAATGAGTGTAACCGGTTAATATCGCCGGGT
FD985136       --> TTTGTCTAAATCCGAATTGGAATGAGTGTAACCGGTTAGTATCGCCGGGT
EV574138       --> ..................................................

               601    -    651
UN21553        --> AACATCC-AACC-GGTGCTAAATTCAGTACCAAAAATGTCCGACCACCTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX765453       <-- AACATCC-AACC-GGTGCTAAATTCAGTACCAAAAATGTCCGACCACCTA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV569643       <-- AACATCC-AACCCGGTGCTAAATTTAGTACCAAAAATGTCCGACCACCTA  Raphanus raphanistrum subsp. landra
FD578825       <-- AACATCC-AACC-GGTGCTAAATTCAGTGCCAAAAATGTCCGACCACCTA  Raphanus sativus cv Rat-Tail Radish #3870
EV550541       <-- AACATCC-AACC-GGTGCTAAATTCAGTACCAAAAATGTCCGACCACCTA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX769969       <-- ..CATCC-AACT-GGTGCTAAATTTAGTACCAAAAATGTCCGACCAC-TA  Raphanus raphanistrum subsp. landra
FD989343       <-- ..................................................  Raphanus raphanistrum subsp. landra
EV545821       --> AACATCC-AACC-GGTGCTAAATTCAGTACCAAAAATGTCCGACCACCTA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX769244       --> AACATCC-AACC-GGTGCTAAATTCAGTACCAAAAATGTCCGACCACCTA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX774217       --> AACATCC-AACT-GGTGCTAAATTTAGTACCAAAAATGTCCGACCACCTA  Raphanus raphanistrum subsp. landra
FD582917       --> AACATCC-AACC-GGTGCTAAATTCAGTGCCAAAAA..............  Raphanus sativus cv Rat-Tail Radish #3870
FD985136       --> AACATCC-AACT-GGTGCTAAATTTAGTACCAAAAATGTCCGACCACCTA  Raphanus raphanistrum subsp. landra
EV574138       --> .ACATCCCAACC-GGTGCTAAATTTAGTACCAAAAATGTCCGACCACCTA  Raphanus raphanistrum subsp. landra

               651    -    701
UN21553        --> TTCCATATATCTCCTTAATGGTTCCAGCAATTTGGCTAATGACTTGTGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX765453       <-- TTCCATATATCTCTTTAATGGTTCCAGCAATTTGGCTAATGACTTGTGGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV569643       <-- TTCCATATATCTCCTTAATGGTTCCAGAAATTTGGCCAATGACTTGCGGA  Raphanus raphanistrum subsp. landra
FD578825       <-- TTCCATATATCTCCTTAATGGTTCCAGCAATTTGGCTAATGACTTGTGGA  Raphanus sativus cv Rat-Tail Radish #3870
EV550541       <-- TTCCATATATCTCTTTAATGGTTCCAGCAATTTGGCTAATGACTTGTGGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX769969       <-- TTCCATATATCTC-TTAATGGTTCCAGAAATTTGGCCAATGACTTGTGGA  Raphanus raphanistrum subsp. landra
FD989343       <-- ..................................................  Raphanus raphanistrum subsp. landra
EV545821       --> TTCCATATATCTCCTTAATGGTTCCAGCAATTTGGCTAATGACTTGTGGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX769244       --> TTCCATATATCTCCTTAATGGTTCCAGCAATTTGGCTAATGACTTGTGGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX774217       --> TTCCATATATCTCCTTAATGGTTCCAGAAATTTGGCCAATGACTTGTGGA  Raphanus raphanistrum subsp. landra
FD582917       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD985136       --> TTCCATATATCTCCTTAATGGTTCCAGAAATTTGGCCAATGACTTGTGGA  Raphanus raphanistrum subsp. landra
EV574138       --> TTCCATATATCTCCTTAATGGTTCCAGAAATTTGGCCAATGACTTGCGGA  Raphanus raphanistrum subsp. landra

               701    -    751
UN21553        --> AGATACTGTTTTACACCATCC-ACTCCAATGGAAGCTAAATTGGATGTGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX765453       <-- AGATACTGTTTTACACCATCC-ACTCCAATGGAAGCTAAATTGGAGGTGA
EV569643       <-- AGATACTGTTTTACACCATCCCACTCCAATGGAAGCTAAATTGGATGTGA
FD578825       <-- AGATACTGTTTTACACCATCC-ACTCCAATGGAAGCTAAATTGGATGTGA
EV550541       <-- AGATACTGTTTTACACCATCC-ACTCCAATGGAAGCTAAATTGGAAGTGA
EX769969       <-- AGATACTGTTTTACACCATCC-ACTCCAATGGAAGCTAAATTGGATGTGA
FD989343       <-- ..................................................
EV545821       --> AGATACTGTTTTACACCATCC-ACTCCAATGGAAGCTAAATTGGAAGTGA
EX769244       --> AGATACTGTTTTACACCATCC-ACTCCAATGGAAGCTAAATTGGAGGTGA
EX774217       --> AGATACTGTTTTACACCATCC-ACTCCAATGGAAGCTAAATTGGATG...
FD582917       --> ..................................................
FD985136       --> AGATACTGTTTTACACCATCC-ACTCCAATGGAAGCTAAATTGGATGTGA
EV574138       --> AGATACTGTTTTACACCATCC-ACTCCAATGGAAGCTAAATTGGATGTGA

               751    -    801
UN21553        --> AATCGTTTTGGCCGATATAAAACGTATAAAGCGATTTTCCGAAAATATTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX765453       <-- AATCGTTTTGGCCGATATAAAACGTATAAAGCGATTTTCCGAAAATATTG
EV569643       <-- AATCGTTTTGGCCGATATAAAACGTATAAAGCGATTTTCCGAAAATATTG
FD578825       <-- AATCGTTTTGGCCGATATAAAACGTATAAAGCGATTTTCCGAAAATATTG
EV550541       <-- AATCGTTTTGGCCGATATAAAACGTATAAAGCGATTTTCCGAAAATATTG
EX769969       <-- AATCGTTTTGGCCGATATAAAACGTATAAAGCGATTTTCCGAAAATATTG
FD989343       <-- ...CGTTTTGGCCGATATAAAACGTATAAAGCGATTTTCCGAAAATATTG
EV545821       --> AATCGTTTTGGCCGATATAAAA............................
EX769244       --> AATCGTTTTGGCCGAT..................................
EX774217       --> ..................................................
FD582917       --> ..................................................
FD985136       --> AATCGTTTTGGCCGATATAAAACGTATAAAGCGATTTTCCGAAAATATTG
EV574138       --> AATCGTTTTGGCCGATATAAAACGTATAAAGCGATTTTCCGAAAATATTG

               801    -    851
UN21553        --> CTAGGCGGTAAGATATGCAACCCTGGTAGGTCCGAGGAATGGAACTCGTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX765453       <-- CTAGGCGGTAGGATATGCAACCCTGGTAGGTCCGAGGAATGGAACTCGTC
EV569643       <-- CTAGGCGGTAAGATATGCAACCCTGGTAGGTCCGAGGAATGGAACTCGTC
FD578825       <-- CTAGGCGGTAAGATATGCAACCCTGGTAGGTCCGAGGAATGGAACTCGTC
EV550541       <-- CTAGGCGGTAGGATATGCAACCCTGGTAGGTCCGAGGAATGGAACTCGTC
EX769969       <-- CTAGGCGGTAAGATATGCAACCCTGGTAGGTCCGAGGAATGGAACTCGTC
FD989343       <-- CTAGGCGGTAAGATATGCAACCCTGGTAGGTCCGAGGAATGGAACTCGTC
EV545821       --> ..................................................
EX769244       --> ..................................................
EX774217       --> ..................................................
FD582917       --> ..................................................
FD985136       --> CTAGGCGGTAAGATATGCAACCCTGGTAGGTCCGAGGAATGGAACTCGTC
EV574138       --> CTAGGCGGTAAGATATGCAACCCTG.........................

               851    -    901
UN21553        --> GACTCTAAC-CTTAAATTGTTTCATCTGATTTAGCTGAATAGCGAGTGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX765453       <-- GACTCTAAC-CTTAAATTGTTTCATCTGATTTAGCTGAATAGCAAGTGAG
EV569643       <-- GACTCTAACTCTTAAATTGTTTCATCTGATTTAGCTGAATAGCGAGTGAG
FD578825       <-- GACTCTAAC-CTTAAATTGTTTCATCTGATTTAGCTGAATAGCGAGTGAG
EV550541       <-- GACTCTAAC-CTTAAATTGTTTCATCTGATTTAGCTGAATAGCAAGTGAG
EX769969       <-- GACTCTAAC-CTTAAATTGTTTCATCTGATTTAGCTGAATAGCGAGTGAG
FD989343       <-- GACTCTAAC-CTTAAATTGTTTCATCTGATTTAGCTGAATAGCGAGTGAG
EV545821       --> ..................................................
EX769244       --> ..................................................
EX774217       --> ..................................................
FD582917       --> ..................................................
FD985136       --> GACTCTAAC-CTTAAATTGTTTCATCTGATTTAGCTGAATAGCGAGTGAG
EV574138       --> ..................................................

               901    -    951
UN21553        --> AAAGGACTGATCCCGGAGACGAACAAGGACGTGTTTGGCAAAAGAACCGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX765453       <-- AAAGGACTGATCCCGGAGACGAACAAGGACGTGTTTGGCAAAAGAACCGT
EV569643       <-- AAAGGACTGATCCCGGAGACGAACAAGGACGTGTTTGGCAAAAGAACCGT
FD578825       <-- AAAGGACTGATCCCGCAGACGAACAAGGACGTGTTTGGCAAAAGAACCGT
EV550541       <-- AAAGGACTGATCCCGGAGACGAACAAGGACGTGTTTGGCAAAAGAACCGT
EX769969       <-- AAAGGACTGATCCCGGAGACGAACAAGGACGTGTTTGGCAAAAGAACCGT
FD989343       <-- AAAGGACTGATCCCGGAGACGAACAAGGACGTGTTTGGCAAAAGAACCGT
EV545821       --> ..................................................
EX769244       --> ..................................................
EX774217       --> ..................................................
FD582917       --> ..................................................
FD985136       --> AAAGGACTGATCCCGGAGACGAACAAGGACGTGTTTGGCAAAAGAACCGT
EV574138       --> ..................................................

               951    -   1001
UN21553        --> CGACGCTAAGGTCGCAAAGTTTGCACCGTGTCGAAAATCCGATCCGATTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX765453       <-- CGACGCTAAGGTCGCAAAGTTTGCACCGTGTCGAAAATCCGATCCGATTG
EV569643       <-- CGACGCTAAGGTCGCAAAGTTTGCACCGTGTCGAAAATCCGATCCGATTG
FD578825       <-- CGACGCTAAGGTCGCAAAGTTTGCACCGTGTCGAAAATCCGATCCGATTG
EV550541       <-- CGACGCTAAGGTCGCAAAGTTTGCACCGTGTCGAAAATCCGATCCGATTG
EX769969       <-- CGACGCTAAGGTCGCAAAGTTTGCACCGTGTCGAAAATCCGATCCGATTG
FD989343       <-- CGACGCTAAGGTCGCAAAGTTTGCACCGTGTCGAAAATCCGATCCGATTG
EV545821       --> ..................................................
EX769244       --> ..................................................
EX774217       --> ..................................................
FD582917       --> ..................................................
FD985136       --> CGACGCTAAGGTCGCAAAGTTTGCACCGTGTCGAAAATCCGATCCGATTG
EV574138       --> ..................................................

               1001   -   1051
UN21553        --> ATTGCAAATATGGGCTTAGGAAAGGCATCCCAAGAGATTCCGCCAAAAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX765453       <-- ATTGCAAATATGGGCTTAGGAAAGGCATCCCAAGAGATTCCGCCAAAAAA
EV569643       <-- ATTGCAAATATGGGCTTAGGAAAGGCATCCCAAGAGATTCCGCCAAAAAA
FD578825       <-- ATTGCAAATATGGGCTTAGGAAAGACATCCCAAGAGATTCCGCCAAAAAA
EV550541       <-- ATTGCAAATATGGGCTTAGGAAAGGCATCCCAAGAGGTTCCGCCAAAAAA
EX769969       <-- ATTGCAAATATGGGCTTAGGAAAGGCATCCCAAGAGATTCCGCCAAAAAA
FD989343       <-- ATTGCAAATATGGGCTTAGGAAAGGCATCCCAAGAGATTCCGCCAAAAAA
EV545821       --> ..................................................
EX769244       --> ..................................................
EX774217       --> ..................................................
FD582917       --> ..................................................
FD985136       --> ATTGCAAATATGGGCTTAGGAAAGGCATCCCAAGAGATTCCGCCAAAAAA
EV574138       --> ..................................................

               1051   -   1101
UN21553        --> TCAATGATGAGACGGCCGTCTGAAGCACGACCGACCGGTTTCTTGAAATA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX765453       <-- TCAATGATGAGACGGCCGTCTGAAGCACGACCGACCGGTTTCTTGAAATA
EV569643       <-- TCAATGATGAGACGGCCGTCTGAAGCACGGCCGACCGGTTTCTTGAAATA
FD578825       <-- TCAATGATGAGACGGCCGTCTGAAGCACGACCGACCGGTTTCTTGAAATA
EV550541       <-- TCAATGATGAGACGGCCGTCTGAAGCACGACCGACCGGTTTCTTGAAATA
EX769969       <-- TCAATGATGAGACGGCCGTCTGAAGCACGACCGACCGGTTTCTTGAAATA
FD989343       <-- TCAATGATGAGACGGCCGTCTGAAGCACGACCGACCGGTTTCTTGAAATA
EV545821       --> ..................................................
EX769244       --> ..................................................
EX774217       --> ..................................................
FD582917       --> ..................................................
FD985136       --> TCAATGATGAGACGGCCGTCTGAAGCACGACCGACCGGTTTCTTGAAATA
EV574138       --> ..................................................

               1101   -   1151
UN21553        --> AGTCATTCCCCATGGACCGGATTGAGCCGGAAAAGCAGCCCAAAATCCTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX765453       <-- AGTCATACCCCATGGACCGGACTGAGCCGGAAAAGCAGCCCAAAATCCTC
EV569643       <-- AGTCAT-CCCCATGGACCGGATTGAGCCGGAAGAGCAGCCCAAAATCCTC
FD578825       <-- AGTCATTCCCCATGGACCGGATTGAGCCGGAAAAGCAGCCCAAAATCCTC
EV550541       <-- AGTCATACCCCATGGACCG...............................
EX769969       <-- AGTCATTCCCCATGGACCGGATTGAGCCGGAAAAGCAGCCCAAAATCCTC
FD989343       <-- AGTCATTCCCCATGGACCGGATTGAGCCGGAAAAGCAGCCCAAAATCCTC
EV545821       --> ..................................................
EX769244       --> ..................................................
EX774217       --> ..................................................
FD582917       --> ..................................................
FD985136       --> AGTCATTCCCCATGGACCGGATTGAGCCGGAAAAGCAGCCCAAAATCCTC
EV574138       --> ..................................................

               1151   -   1201
UN21553        --> CAGTGTCAGAGTTCGAATCTCCGAAATTAAAAATTGCCTTGAATTCACAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX765453       <-- CAGTGTCAGAGTTGGAATCTCCGAAATTAAAAATTGCCTTGAATTCACAT
EV569643       <-- CAGTGTCAGAGTTCGAATCTCCGAAATTAAAAATTGCCTTGAATTCACAT
FD578825       <-- CAGTGTCAGAGTTCGAATCTCCGAAATTAAAAATTGCCTTGAATTCACAT
EV550541       <-- ..................................................
EX769969       <-- CAGTGTCAGAGTTCGAATCTCCGAAATTAAAAATTGCCTTGAATTCACAT
FD989343       <-- CAGTGTCAGAGTTCGAATCTCCGAAATTAAAAATTGCCTTGAATTCACAT
EV545821       --> ..................................................
EX769244       --> ..................................................
EX774217       --> ..................................................
FD582917       --> ..................................................
FD985136       --> CAGTGTC...........................................
EV574138       --> ..................................................

               1201   -   1251
UN21553        --> TTTGAATCAGCTTTACACGAAGAGAACATCACAATGATCACTGTTAGAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX765453       <-- TTTGAATCAGCTTTACAGGAAGAGAACATCACAATGATCACTGTTAGAAG
EV569643       <-- TTTGAATCAGCTTTACACGAAGAGAACATCACAATGATCACTGTTAGAAG
FD578825       <-- TTTGAATCAGCTTTACACGAAGAGAACATCACAATGATCACTGTTAGAAG
EV550541       <-- ..................................................
EX769969       <-- TTTGAATCAGCTTTACACGAAGAGAACATCACAATGATCACTGTTAGAAG
FD989343       <-- TTTGAATCAGCTTTACACGAAGAGAACATCACAATGATCACTGTTAGAAG
EV545821       --> ..................................................
EX769244       --> ..................................................
EX774217       --> ..................................................
FD582917       --> ..................................................
FD985136       --> ..................................................
EV574138       --> ..................................................

               1251   -   1301
UN21553        --> AGAGAAAGATACTCTTCTATTTAGAACATAACCCATTTCTCTCACTTTGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX765453       <-- AGAGAAGGATACTCTTCTATTTAGAACATAACCCATTTCTCTCACTTTGA
EV569643       <-- AGAGAAAGATACTCTTCTATTTAGAACATAACCCATTTCTCTCACTTTGA
FD578825       <-- AGAGAAAGATACTCTTCTATTTAGAACATAACCCATTTCTCTCACTTTGA
EV550541       <-- ..................................................
EX769969       <-- AGAGAAAGATACTCTTCTATTTAGAACATAAC..................
FD989343       <-- AGAGAAAGATACTCTTCTATTTAGAACATAACCCATTTCTCTCACTTTGA
EV545821       --> ..................................................
EX769244       --> ..................................................
EX774217       --> ..................................................
FD582917       --> ..................................................
FD985136       --> ..................................................
EV574138       --> ..................................................

               1301   -   1351
UN21553        --> GCCAAATGTTTGTGAGTGTGTCCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~
EX765453       <-- GCCAAATGTTTGCGAGTGTGTCCC
EV569643       <-- GCCAAATGTTTGTGAGTGTGTCCC
FD578825       <-- GCCAAATGTTTGTGAATGTGTCCC
EV550541       <-- ........................
EX769969       <-- ........................
FD989343       <-- GCCAAATGTTTGTGAGTccc....
EV545821       --> ........................
EX769244       --> ........................
EX774217       --> ........................
FD582917       --> ........................
FD985136       --> ........................
EV574138       --> ........................