RadishBase

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Alignment for radish unigene UN21579

               1      -     51
UN21579        --> GGATCGATAGTTACACTACTATCATCATCGTCTTCCTCCTCCCCTTTCCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV543799       <-- ..................................................
FD567382       <-- ..................................................
EV540678       <-- ..................................................
EX766246       <-- ..................................................
EX908463       <-- ..................................................
EW721084       <-- ..................................................
FD547375       <-- ..................................................
FD574487       <-- ..................................................
FD977650       <-- ..................................................
EY911532       <-- ..................................................
EY936424       <-- ..................................................
EY900012       --> GGATCGATAGTTACACTACTATCATCATCGTCTTCCTCCTCCCCTTTCCT
EW717088       --> ........AGTTACACTACAATCATCATCGTCTTCCTCCTCCCCTTTCCT
EX904588       --> ..................................................
EX771077       --> ..................................................
FD563717       --> ..................................................
EV536166       --> ..................................................
EV548049       --> ..................................................

               51     -    101
UN21579        --> GAGGAGAGGCCTGTTATTGTGCTTTCAGCAATGGGGAAGACAACTAATAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV543799       <-- ..................................................
FD567382       <-- ..................................................
EV540678       <-- ..................................................
EX766246       <-- ..................................................
EX908463       <-- ..................................................
EW721084       <-- ..................................................
FD547375       <-- ..................................................
FD574487       <-- ..................................................
FD977650       <-- ..................................................
EY911532       <-- ..................................................
EY936424       <-- ..................................................
EY900012       --> GAGGAGAGGCCTGTTATTGTGCTTTCAGCAATGGGGAAGACAACTAATAA
EW717088       --> GAGGAGAGGCCTGTTATTGTGCTTTCAGCAATGGGGAAGACAACTAATAA
EX904588       --> ...............................gGGGGAAGACTACTAATAA
EX771077       --> ..................................................
FD563717       --> ..................................................
EV536166       --> ..................................................
EV548049       --> ..................................................

               101    -    151
UN21579        --> GCTTCTAAAGGCTGGAGAGAAGGCTGTTACTTGTGGTGTCACAAACGTAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV543799       <-- ..................................................
FD567382       <-- ..................................................
EV540678       <-- ..................................................
EX766246       <-- ..................................................
EX908463       <-- ..................................................
EW721084       <-- ..................................................
FD547375       <-- ..................................................
FD574487       <-- ..................................................
FD977650       <-- ..................................................
EY911532       <-- ..................................................
EY936424       <-- ..................................................
EY900012       --> GCTTCTAAAGGCTGGAGAGAAGGCTGTTACTTGTGGTGTCACAAACGTAG
EW717088       --> GCTTCTAAAGGCTGGAGAGAAGGCTGTTACTTGTGGTGTCACAAACGTAG
EX904588       --> GCTTCTAAAGGCTGGAGAGAAGGCTGTTACTTGCGGTGTCACAAACGTAG
EX771077       --> ..................................................
FD563717       --> ..................................................
EV536166       --> ..................................................
EV548049       --> ..................................................

               151    -    201
UN21579        --> AAAGTATTGAAGAACTGAGCTTTATTAAGGAACTCCATTTAAGAACTGCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV543799       <-- ..................................................
FD567382       <-- ..................................................
EV540678       <-- ..................................................
EX766246       <-- ..................................................
EX908463       <-- ..................................................
EW721084       <-- ..................................................
FD547375       <-- ..................................................
FD574487       <-- ..................................................
FD977650       <-- ..................................................
EY911532       <-- ..................................................
EY936424       <-- ..................................................
EY900012       --> AAAGTATTGAAGAACTGAGCTTTATTAAGGAACTCCATTTAAGAACTGCT
EW717088       --> AAAGTATTGAAGAACTGAGCTTTATTAAGGAACTCCATTTAAGAACTGCT
EX904588       --> AAAGTATTGAAGAACTGAGCTTTATTAAGGAACTCCATTTAAGAACTGCT
EX771077       --> ..................................................
FD563717       --> ..................................................
EV536166       --> ..................................................
EV548049       --> ..................................................

               201    -    251
UN21579        --> CATGAGCTTGGAGTGGAAACAACTGTTATTGCACAACACCTAGAAGGACT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV543799       <-- ..................................................
FD567382       <-- ..................................................
EV540678       <-- ..................................................
EX766246       <-- ..................................................
EX908463       <-- ..................................................
EW721084       <-- ..................................................
FD547375       <-- ..................................................
FD574487       <-- ..................................................
FD977650       <-- ..................................................
EY911532       <-- ..................................................
EY936424       <-- ..................................................
EY900012       --> CATGAGCTTGGAGTGGAAACAACTGTTATTGCACAACACCTGGAAGGACT
EW717088       --> CATGAGCTTGGAGTGGAAACAACTGTTATTGCACAACACCTAGAAGGACT
EX904588       --> CATGAGCTTGGAGTGGAAACAACTGTTATTGCACAACACCTAGAAGGACT
EX771077       --> ..................................................
FD563717       --> ..................................................
EV536166       --> ..................................................
EV548049       --> ..................................................

               251    -    301
UN21579        --> ACACCAGCTGCTGAAAGGCATATCGATGATGAAAGAGTTGACCTTGCGTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV543799       <-- ..................................................
FD567382       <-- ..................................................
EV540678       <-- ..................................................
EX766246       <-- ..................................................
EX908463       <-- ..................................................
EW721084       <-- ..................................................
FD547375       <-- ..................................................
FD574487       <-- ..................................................
FD977650       <-- ..................................................
EY911532       <-- ..................................................
EY936424       <-- ..................................................
EY900012       --> ACACCAGCTGCTGAAAGGCATATCGATGATGAAAGAGTTGACCTTGCGTA
EW717088       --> ACACCAGCTGCTGAAAGGCATATCGATGATGAAAGAGTTGACCTTGCGTA
EX904588       --> ACACCAGCTGCTGAAAGGCATATCGATGATGAAAGAGTTAACCTTGCGTA
EX771077       --> ....................gATCGATGATGAAAGAGTTAACCTTGCGTA
FD563717       --> ..................................................
EV536166       --> ..................................................
EV548049       --> ..................................................

               301    -    351
UN21579        --> CAAGAGACTACTTGGTCTCGTTTGGAGAGTGTATGTCCACAAGGCTTTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV543799       <-- ..................................................
FD567382       <-- ..................................................
EV540678       <-- ..................................................
EX766246       <-- ..................................................
EX908463       <-- ..................................................
EW721084       <-- ..................................................
FD547375       <-- ..................................................
FD574487       <-- ..................................................
FD977650       <-- ..................................................
EY911532       <-- ..................................................
EY936424       <-- ..................................................
EY900012       --> CAAGAGACTACTTGGTCTCGTTTGGAGAGTGTATGTCCACAAGGCTTTTC
EW717088       --> CAAGAGACTACTTGGTCTCGTTTGGAGAGTGTATGTCCACAAGGCTTTTC
EX904588       --> CAAGAGACTACTTGGTCTCGTTTGGAGAGTGTATGTCCACAAGGCTTTTC
EX771077       --> CAAGAGACTACTTGGTCTCGTTTGGAGAGTGTATGTCCACAAGGCTTTTC
FD563717       --> ............................tgggATGTCCACAAGGCTTTTC
EV536166       --> ..................................................
EV548049       --> ..................................................

               351    -    401
UN21579        --> TCTGCGTATCTCAACAAAATTGGCCATAAAGCTCGTCAATATGATGCATT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV543799       <-- ..................................................
FD567382       <-- ..................................................
EV540678       <-- ..................................................
EX766246       <-- ..................................................
EX908463       <-- ..................................................
EW721084       <-- ..................................................
FD547375       <-- ..................................................
FD574487       <-- ..................................................
FD977650       <-- ..................................................
EY911532       <-- ..................................................
EY936424       <-- ..................................................
EY900012       --> TCTGCGTATCTCAACAAAATTGGCCACAAAGCTCGTCAATATGATGCATT
EW717088       --> TCTGCGTATCTCGACAAAATTGGCCACAAAGCTCGTCAATATGATGCATT
EX904588       --> TCTGCGTATCTCAACAAAATTGGCCATAAAGCTCGTCAATATGATGCATT
EX771077       --> TCTGCGTATCTCAACAAAATTGGCCATAAAGCTCGTCAATATGATGCATT
FD563717       --> TCTGCGTATCTCAACAAAATTGGCCATAAAGCTCGTCAATATGATGCATT
EV536166       --> ..................................................
EV548049       --> ..................................................

               401    -    451
UN21579        --> TGAGATTGGGTTTATAACCACAGACGATTTCACAAATGCTGATATACTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV543799       <-- ..................................................
FD567382       <-- ..................................................
EV540678       <-- ..................................................
EX766246       <-- ..................................................
EX908463       <-- ..................................................
EW721084       <-- ..................................................
FD547375       <-- ..................................................
FD574487       <-- ..................................................
FD977650       <-- ..................................................
EY911532       <-- ..................................................
EY936424       <-- ..................................................
EY900012       --> TGAGATTGGGTTTATAACCACAGACGATTTCACAAATGCTGATATACTTG
EW717088       --> TGAGATTGGGTTTATAACCACAGACTATTTCACAAATGCTGATATACTTG
EX904588       --> TGAGATTGGGTTTATAACCACAGACGATTTCACAAATGCTGATATACTTG
EX771077       --> TGAGATTGGGTTTATAACCACAGACGATTTCACAAATGCTGATATACTTG
FD563717       --> TGAGATTGGGTTTATAACCACAGACGATTTCACAAATGCTGATATACTTG
EV536166       --> ..................................................
EV548049       --> ..................................................

               451    -    501
UN21579        --> AAGCAACGTACCCTGCTGTCTCCAAAACGCTGCTTAATAACTGGAGCAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV543799       <-- ..................................................
FD567382       <-- ..................................................
EV540678       <-- ..................................................
EX766246       <-- ..................................................
EX908463       <-- ..................................................
EW721084       <-- ..................................................
FD547375       <-- ..................................................
FD574487       <-- ..................................................
FD977650       <-- ..................................................
EY911532       <-- ..................................................
EY936424       <-- ..................................................
EY900012       --> AAGCAACGTACCCTGCTGTCTCCAAAACGCTGCTTAATAACTGGAGCAAG
EW717088       --> AAGCAACGTACCCTGCTGTCTCCAAAACGCTGCTTAATAACTGGAGCAAG
EX904588       --> AAGCAACGTACCCTGCTGTCTCCAAAACGCTGCTTAATAACTGGAGCAAG
EX771077       --> AAGCAATGTACCCTGCTGTCTCCAAAACGCTGCTTAATAACTGGAGCAAG
FD563717       --> AAGCAACGTACCCTGCTGTCGCCAAAACGCTGCTTAATAACTGGAGCAAG
EV536166       --> ...................gTCCAAAACGCTGATTAATAACTGGAGCAAG
EV548049       --> ..................................................

               501    -    551
UN21579        --> GACAAGGCTGTCCCTGTAGTTACTGGCTTCCTCGGAAAGGGATGGAGGTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV543799       <-- ..................................................
FD567382       <-- ..................................................
EV540678       <-- ..................................................
EX766246       <-- ..................................................
EX908463       <-- ..................................................
EW721084       <-- ..................................................
FD547375       <-- ..................................................
FD574487       <-- ..................................................
FD977650       <-- ..................................................
EY911532       <-- ..................................................
EY936424       <-- ..................................................
EY900012       --> GACAAGGCTGTCCCTGTAGTTACTGGCTTCCTCGGAAAGGGATGGAGGTC
EW717088       --> GACAAGGCTGTCTCTGTAGTTACTGGCTTCCTCGGAAAGGGATGGAGGTC
EX904588       --> GACAAGGCTGTCCCTGTAGTTACTGGCTTCCTCGGAAAGGGATGGAGGTC
EX771077       --> GACAAAGCCGTCCCTGTAGTTACTGGCTTCCTCGGAAAGGGATGGAGGTC
FD563717       --> GACAAGGCTGTCCCTGTAGTTACTGGCTTCCTCGGAAAGGGATGGAGGTC
EV536166       --> GACAAGGCTGTCCCTGTAGTTACTGGCTTCCTCGGAAAGGGATGGAGGTC
EV548049       --> ..................................................

               551    -    601
UN21579        --> TTGTGCTATAACTACGTTAGGCCGGGGTGGTAGTGATTTGACGGCAACAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV543799       <-- ..................................................
FD567382       <-- ..................................................
EV540678       <-- ..................................................
EX766246       <-- ..................................................
EX908463       <-- ..................................................
EW721084       <-- ..................................................
FD547375       <-- ..................................................
FD574487       <-- ..................................................
FD977650       <-- ..................................................
EY911532       <-- ..................................................
EY936424       <-- ..................................................
EY900012       --> TTGTGCTATAACTACGTTAGGCCGGGGTGGTAGTGATTTGACGGCAACAA
EW717088       --> TTGTGCTATAACTACGTTAGGCCGGGGTGGTAGTGATTTGACGGCAACAA
EX904588       --> TTGTGCTATAACTACGTTAGGCCGGGGTGGTAGTGATTTGACGGCAACAA
EX771077       --> TTGTGCTATAACTACGTTAGGCCGGGGTGGTAGTGATTTGACGGCAACAA
FD563717       --> TTGTGCTATAACGACGTTGGGTAGGGGTGGTAGCGATTTGACGGCAACAA
EV536166       --> TTGTGCTATAACTACGTTAGGCAGGGGTGGTAGTGATTTGACGGCAACAA
EV548049       --> ..................................................

               601    -    651
UN21579        --> CGATTGGGAAAGCGTTAGGACTGAGGGAGATTCAGGTTTGGAAAGATGTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV543799       <-- ......................GAGGGAGATTCAGGTTTGGAAAGATGTG
FD567382       <-- ..................................................
EV540678       <-- ..................................................
EX766246       <-- ..................................................
EX908463       <-- ..................................................
EW721084       <-- ..................................................
FD547375       <-- ..................................................
FD574487       <-- ..................................................
FD977650       <-- ..................................................
EY911532       <-- ..................................................
EY936424       <-- ..................................................
EY900012       --> CGATTGGGAAAGCGTTAG-ACTGAGGGAGATTCAG-TTTGGAAAGATGTG
EW717088       --> CGATTGGGAAAGCGTTAGGACTGAGGGAGAT...................
EX904588       --> CGATTGGGAAAGCGTTAGGACTGAGGGAGATTCAGGTTTGGAAAGATGTG
EX771077       --> CGATTGGGAAAGCGTTAGGACTGAGGGAGATTCAGGTTTGGAAAGACGTG
FD563717       --> CGATTGGGAAAGCCTTAGGACTAAGGGAGATTCAGGTTTGGAAAGATGTG
EV536166       --> CGATTGGGAAAGCGTTAGGACTGAGGGAGATTCAGGTTTGGAAAGATGTG
EV548049       --> ......................GAGGGAGATTCAGGTTTGGAAAGATGTG

               651    -    701
UN21579        --> GATGGAGTTTTGACTTGTGATCCGAACATATACTCTGGAGCTCAGTCTGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV543799       <-- GATGGAGTTTTGACTTGTGATCCGAACATATACTCTGGAGCTCAGTCTGT
FD567382       <-- ............ACTTGTGATCCGAATATATACTCTGGAGCTCAGTCTGT
EV540678       <-- .....................................GAGCTCAGTCTGT
EX766246       <-- ........................................CTCAGTCTGT
EX908463       <-- ..................................................
EW721084       <-- ..................................................
FD547375       <-- ..................................................
FD574487       <-- ..................................................
FD977650       <-- ..................................................
EY911532       <-- ..................................................
EY936424       <-- ..................................................
EY900012       --> GATGGAGTTTTGACTTGTGATCCGAACATATACTCTGGAGCTCAGTCTGT
EW717088       --> ..................................................
EX904588       --> GATGGAGTTTTGACTTGTGATCCGAACATATACTCTGGAGCTCAGTCTGT
EX771077       --> GATGGAGTTTTGACTTGTGATCCGAACATATACTCTGGAGCTCAGTCTGT
FD563717       --> GATGGAGTTTTGACTTGTGATCCGAATATATACTCTGGAGCTCAGTCTGT
EV536166       --> GATGGAGTTTTGACTTGTGATCCGAACATATACTCTGGAGCTCAGTCTGT
EV548049       --> GATGGAGTTTTGACTTGTGATCCGAACATATACTCTGGAGCTCAGTCTGT

               701    -    751
UN21579        --> TCCTTGCTTAACGTTCGATGAGGCAGCTGAGCTTGCTTACTTTGGTGCTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV543799       <-- TCCATGCTTAACGTTCGATGAGGCAGCTGAGCTTGCTTACTTTGGTGCCC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD567382       <-- -CCTTACTTAACGTTCGATGAGGCAGCTGAGCTTGCTTACTTCGGTGCTC  Raphanus sativus var. oleiformis
EV540678       <-- TCCATGCTTAACGTTCGATGAGGCAGCTGAGCTTGCTTACTTTGGTGCCC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX766246       <-- TCCATGCATAACGTTCGATGAGGCAGCTGAGCTTGCTTACTTTGGTGCCC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX908463       <-- ........TAACGTTCGATGAGGCAGCTGAGCTTGCTTACTTTGGTGCTC  Raphanus sativus cv Rat-Tail Radish #3870
EW721084       <-- .................ATGAGGCAGCTGAGCTTGCTTACTTTGGTGCTC  Raphanus sativus var. oleiformis
FD547375       <-- .............................AGCTTGCTTACTTTGGTGCCC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD574487       <-- ...................................CTTACTTCGGTGCTC  Raphanus sativus cv Early Scarlet Globe
FD977650       <-- .....................................TACTTTGGTGCCC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY911532       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY936424       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY900012       --> TCCTTACTTAACGTTCGATGAG-CAGCTGAGCTTGCTTACTTT.......  Raphanus raphanistrum subsp. maritimus
EW717088       --> ..................................................  Raphanus sativus var. oleiformis
EX904588       --> TCCTTACTTAACGTTCGATGAGGCAGCTGAGCTTGCTTACTTTGGTGCTC  Raphanus sativus cv Rat-Tail Radish #3870
EX771077       --> TCCTTACTTAACGTTCGATGAGGCAGCTGAGCTTGCTTACTTCGGTGCTC  Raphanus raphanistrum subsp. landra
FD563717       --> TCCTTACTTAACGTTCGATGAGGCAGCTGAGCTTGCTTACTTCGGTGCTC  Raphanus sativus var. oleiformis
EV536166       --> TCCATGCTTAACGTTCGATGAGGCAGCTGAGCTTGCTTACTTTGGTGCCC  Raphanus raphanistrum subsp. raphanistrum (MS)
EV548049       --> TCCATGCTTAACGTTCGATGAGGCAGCTGAGCTTGCTTACTTTGGTGCCC  Raphanus raphanistrum subsp. raphanistrum (NY)

               751    -    801
UN21579        --> AGGTGTTGCATCCACTGTCCATGAGGCCAGCAAGAGATGGTGACATTCCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV543799       <-- AGGTGTTGCATCCACTGTCCATGAGGCCAGCAAGAGATGGTGACATTCCC
FD567382       <-- AGGTGTTGCATCCACTGTCCATGAGGCCAGCAAGAGATGGTGACATTCCC
EV540678       <-- AGGTGTTGCATCCACTGTCCATGAGGCCAGCAAGAGATGGTGACATTCCC
EX766246       <-- AGGTGTTGCATCCACTGTCCATGAGGCCAGCAAGAGATGGTGACATTCCC
EX908463       <-- AGGTGTTGCATCCACTCTCCATGCGGCCAGCAAGAGATGGTGACATTCCC
EW721084       <-- AGGTGTTGCATCCACTCTCCATGCGGCCAGCAAGAGATGGTGACATTCCC
FD547375       <-- AGGTGTTGCATCCACTGTCCATGAGGCCAGCAAGAGATGGTGACATTCCC
FD574487       <-- AGGTGTTGCATCCACTGTCCATGAGGCCAGCAAGAGATGGTGACATTCCC
FD977650       <-- AGGTGTTGCATCCACTGTCCATGAGGCCAGCAAGAGATGGTGACATTCCC
EY911532       <-- ...................CATGAGGCCAGCAAGAGATGGTGACATTCCC
EY936424       <-- ..................................................
EY900012       --> ..................................................
EW717088       --> ..................................................
EX904588       --> AG-TGTTGCATCCACTCTCCATGCGGC-AGCAAGAGATGGTGAC......
EX771077       --> AGGTGTTGCATCCACTCTCCATGCGGCCAGCAAGAGATGGTGACATTCCC
FD563717       --> AGGTGTTGCATCCACTGTCCATGAGGCCAGCAAGAGATGGTGACATTCCC
EV536166       --> AGGTGTTGCATCCACTGTCCATGAGGCCAGCAAGAGATGGTGACATTCCC
EV548049       --> AGGTGTTGCATCCACTGTCCATGAGGCCAGCAAGAGATGGTGACATTCCC

               801    -    851
UN21579        --> GTGAGGGTTAAGAACTCGTACAACCCCAATGCTCCAGGAACTGTCATCAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV543799       <-- GTTAGAGTTAAGAACTCGTACAACCCCAATGCTCCAGGAACTGTCATCAC
FD567382       <-- GTCAGAGTTAAGAACTCGTACAACCCCAATGCTCCAGGAACTGTCATCAC
EV540678       <-- GTGAGGGTTAAGAACTCGTACAACCCCAATGCTCCAGGAACTGTCATCAC
EX766246       <-- GTTAGAGTTAAGAACTCGTACAACCCCAATGCTCCAGGAACTGTCATCAC
EX908463       <-- GTGAGGGTTAAGAACTCGTACAACCCCAATGCTCCGGGAACTGTCATCAC
EW721084       <-- GTGAGGGTTAAGAACTCGTACAACCCCAATGCTCCGGGAACTGTCATCAC
FD547375       <-- GTGAGGGTTAAGAACTCGTACAACCCCAATGCTCCAAGAACTGTCATCAC
FD574487       <-- GTCAGAGTTAAGAACTCGTACAACCCCAATGCTCCAGGAACTGTCATCAC
FD977650       <-- GTGAGGGTTAAGAACTCGTACAATCCCAATGCTCCAGGAACTGTCATCAC
EY911532       <-- GTGAGGGTTAAGAACTCGTACAACCCCAATGCCCCAGGAACTGTCATCAC
EY936424       <-- ..................................................
EY900012       --> ..................................................
EW717088       --> ..................................................
EX904588       --> ..................................................
EX771077       --> GTGAGGGTTAAGAACTCGTACAACCCCAATGCTCCAGGAACTGTCATCAC
FD563717       --> GTCAGAGTTAAGAACTCGTACAACCCCAATGCTCCAGGAACTGTCATCAC
EV536166       --> GTGAGGGTTAAGAACTCGTACAACCCCAATGCTCCAGGAACTGTCATCAC
EV548049       --> GTTAGAGTTAAGAACTCGTACAACCCCAATGCTCCAGGAACTGTCATCAC

               851    -    901
UN21579        --> CAGGTCAAGAGACATGAGTAAGGCCGTTCTCACAAGCATTGTTCTGAAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV543799       <-- CAGGTCAAGAGACATGAGTAAGGCCGTTCTCACAAGCATTGTTCTGAAAC
FD567382       <-- CAGGTCAAGAGACATGAGTAAGGCCGTTCTCACAAGCATTGTTCTGAAAC
EV540678       <-- CAGGTCAAGAGACATGAGTAAGGCCGTTCTCACAAGCATTGTTCTGAAAC
EX766246       <-- CAGGTCAAGAGACATGAGTAAGGCCGTTCTCACAAGCATTGTTCTGAAAC
EX908463       <-- CAGATCCAGAGACATGAGTAAGGCCGTTCTCACAAGCATTGTTCTGAAAC
EW721084       <-- CAGATCCAGAGACATGAGTAAGGCCGTTCTCACAAGCATTGTTCTGAAAC
FD547375       <-- CAGATCCAGAGATATGAGTAAGGCTGTTCTCACAAGCATTGTTCTGAAAC
FD574487       <-- CAGGTCAAGAGACATGAGTAAGGCCGTTCTCACAAGCATTGTTCTGAAAC
FD977650       <-- CAGATCCAGAGACATGAGTAAGGCTGTTCTCACAAGCATTGTTCTGAAAC
EY911532       <-- CAGATCCAGAGACATGAGTAAGGCTGTTCTCACAAGCATTGTTCTGAAAC
EY936424       <-- ...............................ACAAGCATTGTTCTGAAAC
EY900012       --> ..................................................
EW717088       --> ..................................................
EX904588       --> ..................................................
EX771077       --> CAGGTCAAGAGACATGAGTAAGGCCGTTCTCACAAGCATTGTTCTGAAAC
FD563717       --> CAGGTCAAGAGACATGAGTAAGGCCGTTCTCACAAGCATTGTTCTGAAAC
EV536166       --> CAGGTCAAGAGACATGAGTAAGGCCGTTCTCACAAGCATTGTTCTGAAAC
EV548049       --> CAGGTCAAGAGACATGAGTAAGGCCGTTCTCACAAGCATTGTTCTGAAAC

               901    -    951
UN21579        --> GTAATGTGACCATGTTGGACATAGCGAGCACTCGTATGCTCGGCCAGTAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV543799       <-- GTAATGTGACCATGTTGGACATAGCGAGCACTCGTATGCTCGGCCAGTAC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD567382       <-- GTAATGTGACCATGTTGGACATAGCGAGCACTCGTATGCTCGGCCAGTAC  Raphanus sativus var. oleiformis
EV540678       <-- GTAATGTGACCATGTTGGACATAGCAAGCACTCGTATGCTCGGCCAATAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX766246       <-- GTAATGTGACCATGTTGGACATAGCGAGCACTCGTATGCTCGGCCAGTAC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX908463       <-- GTAATGTGACCATGTTGGACATAGCAAGCACTCGTATGTTCGGCCAGTAC  Raphanus sativus cv Rat-Tail Radish #3870
EW721084       <-- GTAATGTGACCATGTTGGACATAGCAAGCACTCGTATGCTCGGCCAGTAC  Raphanus sativus var. oleiformis
FD547375       <-- GTAATGTGACCATGTTGGACATAGCGAGCACTCGTATGCTCGGCCAGTAC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD574487       <-- GTAATGTGACCATGTTGGACATAGCGAGCACTCGTATGCTCGGCCAGTAC  Raphanus sativus cv Early Scarlet Globe
FD977650       <-- GTAATGTGACCATGTTGGACATAGCGAGCACTCGTATGCTCGGCCAGTAC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY911532       <-- GTAATGTGACCATGTTGGACATAGCGAGCACTCGTATGCTCGGCCAGTAC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY936424       <-- GTAATGTGACCATGTTGGACATAGCGAGCACTCGTATGCTCGGCCAGTAC  Raphanus sativus cv Early Scarlet Globe
EY900012       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EW717088       --> ..................................................  Raphanus sativus var. oleiformis
EX904588       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EX771077       --> GTAATGTGACCATGTTGGACATATCAAGCACTCGTATGCTCGGCCAGTAC  Raphanus raphanistrum subsp. landra
FD563717       --> GTAATGTGACCATGTTGGACATAGCGAGCACTCGTATGCTCGccag....  Raphanus sativus var. oleiformis
EV536166       --> GTAATGTGACCATGTTGGACATAGCAAGCACTCGTATGCTCGGCCAATAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV548049       --> GTAATGTGACCATGTTGGACATAGCGAGCACTCGTATGCTCGGCCAGTAC  Raphanus raphanistrum subsp. raphanistrum (NY)

               951    -   1001
UN21579        --> GGTTTCCTCGCCAAGGTGTTTACCACATTTGAAGACTTAGGCATATCGGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV543799       <-- GGTTTCCTCGCCAAGGTGTTTACCACATTTGAAGACTTAGGCATATCGGT
FD567382       <-- GGTTTCCTTGCCAAGGTGTTTACCACATTCGAAGACTTGGGCATATCGGT
EV540678       <-- GGTTTCCTCGCCAAGGTGTTTACCACATTTGAAGACTTAGGCATATCGGT
EX766246       <-- GGTTTCCTCGCCAAGGTGTTTACCACATTTGAAGACTTAGGCATATCGGT
EX908463       <-- GGTTTCCTCGCCAAGGTGTTTACCACATTTGAAGACTTAGGCATATCGGT
EW721084       <-- GGTTTCCTCGCCAAGGTGTTTACCACATTTGAAGACTTAGGCATATCTGT
FD547375       <-- GGTTTCCTCGCCAAGGTGTTTACCACATTTGAAGACTTAGGCATATCGGT
FD574487       <-- GGTTTCCTTGCCAAGGTGTTTACCACATTCGAAGACTTAGGCATATCGGT
FD977650       <-- GGTTTCCTCGCCAAGGTGTTTACCACATTTGAAGACTTAGGCATATCGGT
EY911532       <-- GGTTTCCTCGCCAAGGTGTTTACCACATTTGAAGACTTAGGCATATCGGT
EY936424       <-- GGTTTCCTTGCCAAGGTGTTTACCACATTCGAAGACTTAGGCATATCGGT
EY900012       --> ..................................................
EW717088       --> ..................................................
EX904588       --> ..................................................
EX771077       --> Gtttc.............................................
FD563717       --> ..................................................
EV536166       --> GGTTTCCTCGCCAAGGTGTTTACCACATTTGAAGACTTAGGCATATCGGT
EV548049       --> GGTTTCCTCGCCAAGGTGTTTACCACATTTGAAGACTTAGGCATATCGGT

               1001   -   1051
UN21579        --> GGATGTTGTGGCAACAAGTGAAGTTAGTATATCTCTGACACTTGATCCAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV543799       <-- GGATGTTGTGGCAACAAGTGAAGTTAGTATATCTCTGACACTAGATCCAG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD567382       <-- GGATGTTGTGGCAACAAGTGAAGTTAGTATATCTCTGACACTTGATCCAG  Raphanus sativus var. oleiformis
EV540678       <-- GGATGTTGTGGCAACAAGTGAAGTTAGTATATTTCTGACACTTGATCCAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX766246       <-- GGATGTTGTGGCAACAAGTGAAGTTAGTATATCTCTGACACTAGATCCAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX908463       <-- GGATGTTGTGGCAACAAGTGAAGTTAGTATATTTCTGACACTTGATCCAG  Raphanus sativus cv Rat-Tail Radish #3870
EW721084       <-- GGATGTTGTGGCAACAAGTGAAGTTAGTATATTTCTGACACTTGATCCAG  Raphanus sativus var. oleiformis
FD547375       <-- GGATGTTGTGGCAACAAGTGAAGTTAGTATATCCCTGACACTAGATTCAG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD574487       <-- GGATGTTGTGGCAACAAGTGAAGTTAGTATATCTCTGACACTTGATCCAG  Raphanus sativus cv Early Scarlet Globe
FD977650       <-- GGATGTTGTGGCAACAAGTGAAGTTAGTATATTTCTGACACTAGATCCAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY911532       <-- GGATGTTGTGGCAACAAGTGAAGTTAGTATATTTCTGACACTAGATCCAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY936424       <-- GGATGTTGTGGCAACAAGTGAAGTTAGTATATCTCTGACACTTGATCCAG  Raphanus sativus cv Early Scarlet Globe
EY900012       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EW717088       --> ..................................................  Raphanus sativus var. oleiformis
EX904588       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EX771077       --> ..................................................  Raphanus raphanistrum subsp. landra
FD563717       --> ..................................................  Raphanus sativus var. oleiformis
EV536166       --> GGATGTTGTGGCAACAAGTGAAGTTAGTATATCTCTGACACTTGATCCAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EV548049       --> GGATGTTGTGGCAACAAGTGAAGTTAGTATATCTCTGACACTAGATCCAG  Raphanus raphanistrum subsp. raphanistrum (NY)

               1051   -   1101
UN21579        --> CAAAGCTCTGGGGTAGAGAGTTAGTTCAGCGAGCAAACGAGCTGGATCAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV543799       <-- CAAAGCTCTGGGGTAGAGAGTTAGTTCAGCGAGCAAACGAGCTGGATCAT
FD567382       <-- CAAAGCTCTGGGGTAGGGAGTTAGTTCAGCGAGCAAACGAGCTGGATCAT
EV540678       <-- CAAAGCTCTGGGGTAGAGAGTTAGTTCAGCGAGCAAATGAGCTAGATCAT
EX766246       <-- CAAAGCTCTGGGGTAGAGAGTTAGTTCAGCGAGCAAACGAGCTGGATCAT
EX908463       <-- CAAAGCTCTGGGGTAGAGAGTTAGTTCAGCGAGCAAACGAGCTGGATCAT
EW721084       <-- CAAAGCTCTGGGGTAGAGAGTTAGTTCAGCGAGCAAACGAGCTGGATCAT
FD547375       <-- CAAAGCTCTGGGGTAGAGAGTTAGTTCAGCGAGCAAACGAGCTGGATCAT
FD574487       <-- CAAAGCTCTGGGGTAGAGAGTTAGTTCAGCGAGCAAACGAGCTGGATCAT
FD977650       <-- CAAAGCTCTGGGGTAGAGAGTTAGTTCAGCGAGCAAACGAGCTGGATCAT
EY911532       <-- CAAAGCTCTGGGGTAGAGAGTTAGTTCAGCGAGCAAACGAGCTGGATCAT
EY936424       <-- CAAAGCTCTGGGGTAGAGAGTTAGTTCAGCGAGCAAACGAGCTGGATCAT
EY900012       --> ..................................................
EW717088       --> ..................................................
EX904588       --> ..................................................
EX771077       --> ..................................................
FD563717       --> ..................................................
EV536166       --> CAAAGCTCTGGGGTAGAGAGTTAGTTCAGCGAGCAAATGAGCTAGATCAT
EV548049       --> CAAAGCTCTGGGGTAGAGAGTTAGTTCAGCGAGCAAACGAGCTGGATCAT

               1101   -   1151
UN21579        --> GTGGTGGAGGAGCTAGAGAAGATTGCTGTTGTGAAGCTGCTTCAGCGCAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV543799       <-- GTGGTGGAGGAGCTAGAGAAGATTGCTGTTGTGAAACTGCTTCAGCGCAG
FD567382       <-- GTGGTGGAGGAGCTAGAGAAGATTGCTGTTGTGAAGCTGCTTCAGCGCAG
EV540678       <-- GTGGTGGAGGAGCTAGAGAAGATTGCTGTTGTTAAGCTGCTTCAGCGCAG
EX766246       <-- GTGGTGGAGGAGCTAGAGAAGATTGCTGTTGTGAAACTGCTTCAGCGCAG
EX908463       <-- GTGGTGGAGGAGCTAGAGAAGATTGCTGTTGTGAAGCTGCTTCAGCGCAG
EW721084       <-- GTGGTGGAGGAGCTAGAGAAGATTGCTGTTGTGAAGCTGCTTCAGCGCAG
FD547375       <-- GTGGTGGAGGAGCTAGAGAAGATTGCTGTTGTGAAGCTGCTTCAGCGCAG
FD574487       <-- GTGGTGGAGGAGCTAGAGAAGATTGCTGTTGTGAAGCTGCTTCAGCGCAG
FD977650       <-- GTGGTGGAGGAGCTAGAGAAGATTGCTGTTGTGAAGCTGCTTCAGCGCAG
EY911532       <-- GTGGTGGAGGAGCTAGAGAAGATTGCTGTTGTGAAGCTACTTCAGCGCAG
EY936424       <-- GTGGTGGAGGAGCTAGAGAAGATTGCTGTTGTGAAGCTGCTTCAGCGCAG
EY900012       --> ..................................................
EW717088       --> ..................................................
EX904588       --> ..................................................
EX771077       --> ..................................................
FD563717       --> ..................................................
EV536166       --> GTGGTGGAGGAGCTAGAGAAGATTGCTGTTGTTAAGCTGCTTCAGCGCAG
EV548049       --> GTGGTGGAGGAGCTAGAGAAGATTGCTGTTGTGAAACTGCTTCAGCGCAG

               1151   -   1201
UN21579        --> ATCAATCATCTCTCTCATAGGAAACGTTCAGAAATCATCACTCATATTAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV543799       <-- ATCAATCATCTCTCTCATAGGAAACGTTCAGAAATCATCACTCATATTAG
FD567382       <-- ATCAATCATCTCTCTCATAGGAAACGTTCAGAAATCATCACTCATATTAG
EV540678       <-- ATCAATCATCTCTCTCATAGGAAACGTTCAGAAATCATCACTCATATTAG
EX766246       <-- ATCAATCATCTCTCTCATAGGAAACGTTCAGAAATCATCACTCATATTAG
EX908463       <-- ATCAATCATCTCTCTCATAGGAAACGTTCAGAGATCATCACTCATATTAG
EW721084       <-- ATCAATCATCTCT--CATAGGAAACGTTCAGAAATCATCACTCATATTAG
FD547375       <-- ATCAATCATCTCTCTCATAGGAAACGTTCAGAAATCATCACTCATATTAG
FD574487       <-- ATCAATCATCTCTCTCATAGGAAACGTTCAGAAATCATCACTCATATTAG
FD977650       <-- ATCAATCATCTCTCTCATAGGAAACGTTCAGAAATCATCACTCATATTAG
EY911532       <-- ATCAATCATCTCTCTCATAGGAAACGTTCAGAAATCATCACTCATATTAG
EY936424       <-- ATCAATCATCTCTCTCATAGGAAACGTTCAGAAATCATCACTCATATTAG
EY900012       --> ..................................................
EW717088       --> ..................................................
EX904588       --> ..................................................
EX771077       --> ..................................................
FD563717       --> ..................................................
EV536166       --> ATCAATCATCTCTCTCATAGGAAACGTTCAGAAATCATCACTCATATTAG
EV548049       --> ATCAATCATCTCTCTCATAGGAAACGTTCAGAAATCATCACTCATATTAG

               1201   -   1251
UN21579        --> AGAAGGTTTTTAAAGTACTTAGAAGCAATGGAGTGAATGTGCAGATGATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV543799       <-- GGAAGGTTTTTAAAGTACTTAGAAGCAATGGAGTGAACGTGCAGATGATC
FD567382       <-- AGAAGGTTTTTAAAGTACTTAGAAGCAATGGAGTGAATGTGCAGATGATC
EV540678       <-- AGAAGGTTTTTAAAGTACTTAGAAGCAATGGAGTGAATGTGCAGATGATC
EX766246       <-- AGAAGGTTTTTAAAGTACTTAGAAGCAATGGAGTGAACGTGCAGATGATC
EX908463       <-- AGAAGGTTTTTAAAGTACTTAGAAGCAATGGAGTGAATGTGCAGATGATC
EW721084       <-- AGAAGGTTTTTAAAGTACTTAGAAGCAATGGAGTGAATGTGCAGATGATC
FD547375       <-- AGAAGGTTTTTAAAGTACTTAGAAGCAATGGAGTGAATGTGCAGATGATC
FD574487       <-- AGAAGGTTTTTAAAGTACTTAGAAGCAATTGAGTGAATGTGCAGATGATC
FD977650       <-- AGAAGGTTTTTAAAGTACTTAGAAGCAATGGAGTGAATGTGCAGATGATC
EY911532       <-- AGAAGGTTTTTAAAGTACTTAGAAGCAATGGAGTGAATGTGCAGATGATC
EY936424       <-- AGAAGGTTTTTAAAGTACTTAGAAGCAATGGAGTGAATGTGCAGATGATC
EY900012       --> ..................................................
EW717088       --> ..................................................
EX904588       --> ..................................................
EX771077       --> ..................................................
FD563717       --> ..................................................
EV536166       --> AGAAGGTTTTTAAAGTACTTAGAAGCAATGGAGTGAATGTGCAGATGATC
EV548049       --> GGAAGGTTTTTAAAGTACTTAGAAGCAATGGAGTGAACGTGCAGATGATC

               1251   -   1301
UN21579        --> TCACAGGGTGCATCTAAGGTGAACATATCATTGATAGTGAATGATGAAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV543799       <-- TCGCAGGGTGCATCTAAGGTGAACATATCATTGATAGTGAATGATGAAGA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD567382       <-- TCACAGGGTGCGTCTAAGGTGAACATTTCATTGATAGTGAATGATGAAGA  Raphanus sativus var. oleiformis
EV540678       <-- TCACAGGGTGCATTTAAGGTGAACATTTCACTGATAGTGAATGATGAAGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX766246       <-- TCGCAGGGTGCATCTAAGGTGAACATATCATTGATAGTGAATGATGAAGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX908463       <-- TCACAGGGTGCGTCTAAGGTGAACATATCATTGATAGTGAATGATGAAGA  Raphanus sativus cv Rat-Tail Radish #3870
EW721084       <-- TCACAGGGTGCATCTAAGGTGAACATATCATTGATAGTGAACGATGAAGA  Raphanus sativus var. oleiformis
FD547375       <-- TCACAGGGTGCATCTAAGGTGAACATATCATTGATAGTGAATGATGAAGA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD574487       <-- TCACAGGGTGCGTCTAAGGTGAACATTTCATTGATAGTGAATGATGAAGA  Raphanus sativus cv Early Scarlet Globe
FD977650       <-- TCACAGGGTGCATCTAAGGTGAACATATCATTGATAGTGAATGATGAAGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY911532       <-- TCACAGGGCGCATCTAAGGTGAACATATCATTGATAGTGAATGATGAAGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY936424       <-- TCACAGGGTGCGTCTAAGGTGAACATTTCATTGATAGTGAATGATGAAGA  Raphanus sativus cv Early Scarlet Globe
EY900012       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EW717088       --> ..................................................  Raphanus sativus var. oleiformis
EX904588       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EX771077       --> ..................................................  Raphanus raphanistrum subsp. landra
FD563717       --> ..................................................  Raphanus sativus var. oleiformis
EV536166       --> TC................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV548049       --> TCGCAGG-TGCATCTAAGGTGAACATATCATTGATAGTGAATGATGAAGA  Raphanus raphanistrum subsp. raphanistrum (NY)

               1301   -   1351
UN21579        --> GGCTGAGCAATGTGTGAGGGCTCTTCACTCTGCCTTCTTTGAGACCTCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV543799       <-- GGCTGAGCAATGTGTGAGGGCTCTTCACTCTGCCTTCTTTGAGACCTCTT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD567382       <-- GGCTGAACAATGTGTGAGGGCTCTTCACTCTGCCTTCTTTGAGACCTCTT  Raphanus sativus var. oleiformis
EV540678       <-- GGCCGAGCAATGTGTGAGGGCTCTTCACTCTGCCTTCTTTGAGACCTCTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX766246       <-- GGCTGAGCAATGTGTGAGGGCTCTTCACTCTGCCTTCTTTGAGACCTCTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX908463       <-- GGCTGAGCAATGTGTGAGGGCTCTTCACTCCGCCTTCTTTGAGACCTCTT  Raphanus sativus cv Rat-Tail Radish #3870
EW721084       <-- GGCTGAACAATGTGTGAGGGCTCTTCACTCTGCCTTCTTTGAGACCTCTT  Raphanus sativus var. oleiformis
FD547375       <-- GGCTGAGCAATGTGTGAGGGCTCTTCACTCTGCCTTCTTTGAGACCTCTT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD574487       <-- GGCTGAACAATGTGTGAGGGCTCTTCACTCTGCCTTCTTTGAGACCTCTT  Raphanus sativus cv Early Scarlet Globe
FD977650       <-- GGCTGAGCAATGTGTGAGGGCTCTTCACTCTGCCTTCTTTGAGACCCCTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY911532       <-- GGCTGAGCAATGTGTGAGGGCTCTCCACTCTGCCTTCTTTGAGACCTCTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY936424       <-- GGCTGAACAATGTGTGAGGGCTCTTCACTCTGCCTTCTTTGAGACCTCTT  Raphanus sativus cv Early Scarlet Globe
EY900012       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EW717088       --> ..................................................  Raphanus sativus var. oleiformis
EX904588       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EX771077       --> ..................................................  Raphanus raphanistrum subsp. landra
FD563717       --> ..................................................  Raphanus sativus var. oleiformis
EV536166       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV548049       --> GGCTGAGCAATGTGTGAGGGCTCTTCACTCTGCCTTCTTTGAGACCTCTT  Raphanus raphanistrum subsp. raphanistrum (NY)

               1351   -   1401
UN21579        --> CTTGATGCACAAGACACAGAGCTAAAGAATGTGTCTACTAAGACTTGGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV543799       <-- CTT...............................................
FD567382       <-- CTTGATGCACAAGACACAGAGCTAAAGAATGTGTCTACTAAGACTTGGAA
EV540678       <-- CTTGATGCACAAGACACAGAGCTAAAGAATGTGTCTACTAAGACTTGGAA
EX766246       <-- CTTGATGCACAAGACACAGAGCTAAAGAATGTGTCTACTAAGACTTGGAA
EX908463       <-- CTTGATGCACAAGACACAGAGCTAAAGAATGTGTCTACTAAGACTTGGAA
EW721084       <-- CTTGATGCACAAGACACAGAGCTAAAGGATGTGTCTACTAAGACTTGGAA
FD547375       <-- CTTGATGCACAAGACACATAGCTAAAGAATGCGTCTACTAAGACTTGGAA
FD574487       <-- CTTGATGCACAAGACACAGAGCTAAAGAATGTGTCTACTAAGACTTGGAA
FD977650       <-- CTTGATGCACAAGACACATAGCTAAAGAATGTGTCTACTAAGACTTGGAA
EY911532       <-- CTTGATGCACAAGACACATAGCTAAAGAATGTGTCTACTAAGACTTGGAA
EY936424       <-- CTTGATGCACAAGACACAGAGCTAAAGAATGTGTCTACTAAGACTTGGAA
EY900012       --> ..................................................
EW717088       --> ..................................................
EX904588       --> ..................................................
EX771077       --> ..................................................
FD563717       --> ..................................................
EV536166       --> ..................................................
EV548049       --> CTTGATGCACAAGACACAGAGCTAAAGAATGTGTCTACTAAGACTTGGAA

               1401   -   1451
UN21579        --> CTACTTCACACTCTTCTTCTCTTTCTAGTTGTTGTTGT---GATACGGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV543799       <-- ..................................................
FD567382       <-- CTACTTCACACTCTTCTTCTCTTTCTAGTTGTTGTTGT---GATACGGTT
EV540678       <-- CTACTTCACACTCTTCTTCTCTTTCTAGTTGTTGTTGT---GATACGGTT
EX766246       <-- CTACTTCACACTCTTCTTCTCTTTCTAGTTGTTGTTGT---GATACGGTT
EX908463       <-- CTACTTCACACTCTTCTTCTCTTTCTAGTTGTTGTTGTTGTGATACGGTT
EW721084       <-- CTACTTCACACTCTTCTTCTCTTTCTAGTTGTTGTTGT---GATACGGTT
FD547375       <-- CTACTTCACACTCTTCTTCTCTTCCTAGTTGTTGTTGTTGTGATACGGTT
FD574487       <-- CTACTTCACACTCTTCTTCTCTTTCTAGTTGTTGTTGT---GATACGGTT
FD977650       <-- CTACTTCACACTCTTCTTCTCTTTCTAGTTGTTGTTGTTGTGATACGGTT
EY911532       <-- CTACTTCACACTCTTCTTCTCTTTCTAGTTGTTGTTGTTGTGATACGGTT
EY936424       <-- CTACTTCACACTCTTCTTCTCTTTCTAGTTGTTGTTGT---GATACGGTT
EY900012       --> ..................................................
EW717088       --> ..................................................
EX904588       --> ..................................................
EX771077       --> ..................................................
FD563717       --> ..................................................
EV536166       --> ..................................................
EV548049       --> CTACTTCACACT......................................

               1451   -   1501
UN21579        --> ATAATGTTGTTTCAAACTCTATAATCAATAAAATGTCTTTCAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV543799       <-- ............................................
FD567382       <-- ATAATGTTGTTTCAAACTCTATAATCAATAAAATGTCTTTC...
EV540678       <-- ATAATGTTGTTTCAAACTCTATAATCAATAAAATGTCTTTCAAC
EX766246       <-- ATTATGTTGTTTCAAACTCTATAATCAATAAAATGTCTTTC...
EX908463       <-- ATAATGTTGTTTCAAACTCTATAATCAATAAAATGTCTTTC...
EW721084       <-- ATAATGTTGTTTCAAACCCTATAATCAATAAAATGTCTTTCAAC
FD547375       <-- ATAATGTTGTTTCAAACTCTATAATCAATAAAATGTCTTTC...
FD574487       <-- ATAATGTTGTTTCAAACTCTATAATCAATAAAATGTCTTTC...
FD977650       <-- ATAATGTTGTTTCAAACTCTATAATCAATAAAATGTCTTTC...
EY911532       <-- ATAATGTTGTTTCAAACTCTATAATCAATAAAATGTCTTTC...
EY936424       <-- ATAATGTTGTTTCAAACTCTATAATCAATAAAATGTCTTTC...
EY900012       --> ............................................
EW717088       --> ............................................
EX904588       --> ............................................
EX771077       --> ............................................
FD563717       --> ............................................
EV536166       --> ............................................
EV548049       --> ............................................