1      -     51
UN21581        --> GGACTACCAAAACCTCAAAATTTAGCTTTGGGA-TCATCAAAGCTTCTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY438891       <-- ..................................................
FY434250       <-- ..................................................
EV541613       <-- ..................................................
EY893497       <-- ..................................................
FD967360       <-- ..................................................
EX750604       <-- ..................................................
FD984907       <-- ..................................................
EW718561       <-- ..................................................
EW718824       <-- ..................................................
FY437566       <-- ..................................................
EV537371       --> GGACTACCAAAACCTCAAAATTTAGCTTTGGGAATCATCAAAGCTTCTTC
FY446962       --> .......................AGCTTTGGGA-TCATCAAAGCTTCTTC
FY440158       --> ...................................CATCAAAGCTTCTTC
FY433432       --> .........................................AGCTTCTTC
FY433520       --> .........................................AGCTTCTTC
FY434661       --> .........................................AGCTTCTTC
FY451360       --> .........................................AGCTTCTTC
FY447877       --> ...........................................CTTCTTC
FY447722       --> ............................................TTCTTC
FY450122       --> ..................................................
FY453994       --> ..................................................
FY436125       --> ..................................................
FY439754       --> ..................................................
FY433441       --> ..................................................
FY438518       --> ..................................................
FY436038       --> ..................................................
HS106937       --> ..................................................
FY434197       --> ..................................................
EY897089       --> ..................................................
HS106980       --> ..................................................
FY434935       --> ..................................................
FD987849       --> ..................................................
FD989084       --> ..................................................
EY913898       --> ..................................................
FD971152       --> ..................................................
FY445059       --> ..................................................
EX746124       --> ..................................................
EW714066       --> ..................................................
EW714067       --> ..................................................

               51     -    101
UN21581        --> ATCACCATGGATCCTTACAAGTATCGTCCATCGAGCGCGTACAACTCTCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY438891       <-- ..................................................
FY434250       <-- ..................................................
EV541613       <-- ..................................................
EY893497       <-- ..................................................
FD967360       <-- ..................................................
EX750604       <-- ..................................................
FD984907       <-- ..................................................
EW718561       <-- ..................................................
EW718824       <-- ..................................................
FY437566       <-- ..................................................
EV537371       --> ATCGCCATGGATCCTTACAAGTATCGTCCATCGAGCGCGTACAACTCTCC
FY446962       --> ATCACCATGGATCCTTACAAGTATCGTCCATCGAGCGCGTACAACTCTCC
FY440158       --> ATCACCATGGATCCTTACAAGTATCGTCCATCGAGCGCGTACAACTCTCC
FY433432       --> ATCACCATGGATCCTTACAAGTATCGTCCATCGAGCGCGTACAACTCTCC
FY433520       --> ATCACCATGGATCCTTACAAGTATCGTCCATCGAGCGCGTACAACTCTCC
FY434661       --> ATCACCATGGATCCTTACAAGTATCGTCCATCGAGCGCGTACAACTCTCC
FY451360       --> ATCACCATGGATCCTTACAAGTATCGTCCATCGAGCGCGTACAACTCTCC
FY447877       --> ATCACCATGGATCCTTACA-GTATCGTCCATCGAGCGCGTACAACTCTCC
FY447722       --> ATCACCATGGATCCTTACA-GTATCGTCCATCGAGCGCGTACAACTCTCC
FY450122       --> .....CATGGATCCTTACA-GTATCGTCCATCGAGCGCGTACAACTCTCC
FY453994       --> .....CATGGATCCTTACA-GTATCGTCCATCGAGCGCGTACAACTCTCC
FY436125       --> ........GGATCCTTACA-GTATCGTCCATCGAGCGCGTACAACTCTCC
FY439754       --> ........GGATCCTTACA-GTATCGTCCATCGAGCGCGTACAACTCTCC
FY433441       --> ..........ATCCTTACA-GTATCGTCCATCGAGCGCGTACAACTCTCC
FY438518       --> ........................CGTCCATCGAGCGCGTACAACTCTCC
FY436038       --> .............................ATCGAGCGCGT-CAACTCTCC
HS106937       --> ..................................................
FY434197       --> ..................................................
EY897089       --> ..................................................
HS106980       --> ..................................................
FY434935       --> ..................................................
FD987849       --> ..................................................
FD989084       --> ..................................................
EY913898       --> ..................................................
FD971152       --> ..................................................
FY445059       --> ..................................................
EX746124       --> ..................................................
EW714066       --> ..................................................
EW714067       --> ..................................................

               101    -    151
UN21581        --> CTTCTACACCACAAACGGTGGTGCTCCAGTCTCGAACAACATTTCTTCCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY438891       <-- ..................................................
FY434250       <-- ..................................................
EV541613       <-- ..................................................
EY893497       <-- ..................................................
FD967360       <-- ..................................................
EX750604       <-- ..................................................
FD984907       <-- ..................................................
EW718561       <-- ..................................................
EW718824       <-- ..................................................
FY437566       <-- ..................................................
EV537371       --> CTTCTACACCACAAACGGTGGTGCTCCAGTCTCGAACAACATCTCTTCCC
FY446962       --> CTTCTACACCACAAACGGTGGTGCTCCAGTCTCGAACAACATTTCTTCCC
FY440158       --> CTTCTACACCACAAACGGTGGTGCTCCAGTCTCGAACAACATTTCTTCCC
FY433432       --> CTTCTACACCACAAACGGTGGTGCTCCAGTCTCGAACAACATTTCTTCCC
FY433520       --> CTTCTACACCACAAACGGTGGTGCTCCAGTCTCGAACAACATTTCTTCCC
FY434661       --> CTTCTACACCACAAACGGTGGTGCTCCAGTCTCGAACAACATTTCTTCCC
FY451360       --> CTTCTACACCACAAACGGTGGTGCTCCAGTCTCGAACAACATTTCTTCCC
FY447877       --> CTTCTACACCACAAACGGTGGTGCTCCAGTCTCGAACAACATTTCTTCCC
FY447722       --> CTTCTACACCACAAACGGTGGTGCTCCAGTCTCGAACAACATTTCTTCCC
FY450122       --> CTTCTACACCACAAACGGTGGTGCTCCAGTCTCGAACAACATTTCTTCCC
FY453994       --> CTTCTACACCACAAACGGTGGTGCTCCAGTCTCGAACAACATTTCTTCCC
FY436125       --> CTTCTACACCACAAACGGTGGTGCTCCAGTCTCGAACAACATTTCTTCCC
FY439754       --> CTTCTACACCACAAACGGTGGTGCTCCAGTCTCGAACAACATTTCTTCCC
FY433441       --> CTTCTACACCACAAACGGTGGTGCTCCAGTCTCGAACAACATTTCTTCCC
FY438518       --> CTTCTACACCACAGACGGTGGTGCTCCAGTCTCGAACAACATTTCTTCCC
FY436038       --> CTTCTAC-CCACAAACGGTGGTGCTCCAGTCTCGAACAACATTTCTTCCC
HS106937       --> ...CTACACCACAAACGGTGGTGCTCCAGTCTCGAACAACATTTCTTCCC
FY434197       --> ..................................................
EY897089       --> ..................................................
HS106980       --> ..................................................
FY434935       --> ..................................................
FD987849       --> ..................................................
FD989084       --> ..................................................
EY913898       --> ..................................................
FD971152       --> ..................................................
FY445059       --> ..................................................
EX746124       --> ..................................................
EW714066       --> ..................................................
EW714067       --> ..................................................

               151    -    201
UN21581        --> TCACCATCGGAGAAAGAGGTCCGGTTCTTCTCGAGGACTACCATCTGATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY438891       <-- ..................................................
FY434250       <-- ..................................................
EV541613       <-- ..................................................
EY893497       <-- ..................................................
FD967360       <-- ..................................................
EX750604       <-- ..................................................
FD984907       <-- ..................................................
EW718561       <-- ..................................................
EW718824       <-- ..................................................
FY437566       <-- ..................................................
EV537371       --> TCACCATCGGAGAAAGAGGTCCGGTTCTTCTTGAGGACTACCATCTGATC
FY446962       --> TCACCATCGGAGAAAGAGGTCCGGTTCTTCTCGAGGACTACCATCTGATC
FY440158       --> TCACCATCGGAGAAAGAGGTCCGGTTCTTCTCGAGGACTACCATCTGATC
FY433432       --> TCACCATCGGAGAAAGAGGTCCGGTTCTTCTCGAGGACTACCATCTGATC
FY433520       --> TCACCATCGGAGAAAGAGGTCCGGTTCTTCTCGAGGACTACCATCTGATC
FY434661       --> TCACCATCGGAGAAAGAGGTCCGGTTCTTCTCGAGGACTACCATCTGATC
FY451360       --> TCACCATCGGAGAAAGAGGTCCGGTTCTTCTCGAGGACTACCATCTGATC
FY447877       --> TCACCATCGGAGAAAGAGGTCCGGTTCTTCTCGAGGACTACCATCTGATC
FY447722       --> TCACCATCGGAGAAAGAGGTCCGGTTCTTCTCGAGGACTACCATCTGATC
FY450122       --> TCACCATCGGAGAAAGAGGTCCGGTTCTTCTCGAGGACTACCATCTGATC
FY453994       --> TCACCATCGGAGAAAGAGGTCCGGTTCTTCTCGAGGACTACCATCTGATC
FY436125       --> TCACCATCGGAGAAAGAGGTCCGGTTCTTCTCGAGGACTACCATCTGATC
FY439754       --> TCACCATCGGAGAAAGAGGTCCGGTTCTTCTCGAGGACTACCATCTGATC
FY433441       --> TCACCATCGGAGAAAGAGGTCCGGTTCTTCTCGAGGACTACCATCTGATC
FY438518       --> TCACCATCGGAGAAAGAGGTCCGGTTCTTCTCGAGGACTACCATCTGATC
FY436038       --> TCACCATCGGAGAAAGAGGTCCGGTTCTTCTCGAGGACTACCATCTGATC
HS106937       --> TCACCATCGGAGAAAGAGGTCCGGTTCTTCTCGAGGACTACCATCTGATC
FY434197       --> ..................................................
EY897089       --> ..................................................
HS106980       --> ..................................................
FY434935       --> ..................................................
FD987849       --> ..................................................
FD989084       --> ..................................................
EY913898       --> ..................................................
FD971152       --> ..................................................
FY445059       --> ..................................................
EX746124       --> ..................................................
EW714066       --> ..................................................
EW714067       --> ..................................................

               201    -    251
UN21581        --> GAGAAGGTTGCCAACTTCACCAGGGAGAGGATTCCTGAGAGAGTGGTTCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY438891       <-- ..................................................
FY434250       <-- ..................................................
EV541613       <-- ..................................................
EY893497       <-- ..................................................
FD967360       <-- ..................................................
EX750604       <-- ..................................................
FD984907       <-- ..................................................
EW718561       <-- ..................................................
EW718824       <-- ..................................................
FY437566       <-- ..................................................
EV537371       --> GAGAAGGTTGCCAACTTCACCAGAGAGAGGATTCCTGAGAGAGTGGTTCA
FY446962       --> GAGAAGGTTGCCAACTTCACCAGGGAGAGGATTCCTGAGAGAGTGGTTCA
FY440158       --> GAGAAGGTTGCCAACTTCACCAGGGAGAGGATTCCTGAGAGAGTGGTTCA
FY433432       --> GAGAAGGTTGCCAACTTCACCAGGGAGAGGATTCCTGAGAGAGTGGTTCA
FY433520       --> GAGAAGGTTGCCAACTTCACCAGGGAGAGGATTCCTGAGAGAGTGGTTCA
FY434661       --> GAGAAGGTTGCCAACTTCACCAGGGAGAGGATTCCTGAGAGAGTGGTTCA
FY451360       --> GAGAAGGTTGCCAACTTCACCAGGGAGAGGATTCCTGAGAGAGTGGTTCA
FY447877       --> GAGAAGGTTGCCAACTTCACCAGGGAGAGGATTCCTGAGAGAGTGGTTCA
FY447722       --> GAGAAGGTTGCCAACTTCACCAGGGAGAGGATTCCTGAGAGAGTGGTTCA
FY450122       --> GAGAAGGTTGCCAACTTCACCAGGGAGAGGATTCCTGAGAGAGTGGTTCA
FY453994       --> GAGAAGGTTGCCAACTTCACCAGGGAGAGGATTCCTGAGAGAGTGGTTCA
FY436125       --> GAGAAGGTTGCCAACTTCACCAGGGAGAGGATTCCTGAGAGAGTGGTTCA
FY439754       --> GAGAAGGTTGCCAACTTCACCAGGGAGAGGATTCCTGAGAGAGTGGTTCA
FY433441       --> GAGAAGGTTGCCAACTTCACCAGGGAGAGGATTCCTGAGAGAGTGGTTCA
FY438518       --> GAGAAGGTTGCCAACTTCACCAGGGAGAGGATTCCTGATAGAGTGGTTCA
FY436038       --> GAGAAGGTTGCCAACTTCACCAGGGAGAGGATTCCTGAGAGAGTGGTTCA
HS106937       --> GAGAAGGTTGCCAACTTCACCAGGGAGAGGATTCCTGAGAGAGTGGTTCA
FY434197       --> ..................................................
EY897089       --> ..................................................
HS106980       --> ..................................................
FY434935       --> ..................................................
FD987849       --> ..................................................
FD989084       --> ..................................................
EY913898       --> ..................................................
FD971152       --> ..................................................
FY445059       --> ..................................................
EX746124       --> ..................................................
EW714066       --> ..................................................
EW714067       --> ..................................................

               251    -    301
UN21581        --> TGCTAGAGGAATCAGTGCTAAGGGTTTCTTTGAGGTCACGCATGACATTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY438891       <-- ..................................................
FY434250       <-- ..................................................
EV541613       <-- ..................................................
EY893497       <-- ..................................................
FD967360       <-- ..................................................
EX750604       <-- ..................................................
FD984907       <-- ..................................................
EW718561       <-- ..................................................
EW718824       <-- ..................................................
FY437566       <-- ..................................................
EV537371       --> TGCTAGAGGAATCAGTGCTAAGGGTTTCTTTGAGGTCACGCATGACATTT
FY446962       --> TGCTAGAGGAATCAGTGCTAAGGGTTTCTTTGAGGTCACGCATGACATTT
FY440158       --> TGCTAGAGGAATCAGTGCTAAGGGTTTCTTTGAGGTCACGCATGACATTT
FY433432       --> TGCTAGAGGAATCAGTGCTAAGGGTTTCTTTGAGGTCACGCATGACATTT
FY433520       --> TGCTAGAGGAATCAGTGCTAAGGGTTTCTTTGAGGTCACGCATGACATTT
FY434661       --> TGCTAGAGGAATCAGTGCTAAGGGTTTCTTTGAGGTCACGCATGACATTT
FY451360       --> TGCTAGAGGAATCAGTGCTAAGGGTTTCTTTGAGGTCACGCATGACATTT
FY447877       --> TGCTAGAGGAATCAGTGCTAAGGGTTTCTTTGAGGTCACGCATGACATTT
FY447722       --> TGCTAGAGGAATCAGTGCTAAGGGTTTCTTTGAGGTCACGCATGACATTT
FY450122       --> TGCTAGAGGAATCAGTGCTAAGGGTTTCTTTGAGGTCACGCATGACATTT
FY453994       --> TGCTAGAGGAATCAGTGCTAAGGGTTTCTTTGAGGTCACGCATGACATTT
FY436125       --> TGCTAGAGGAATCAGTGCTAAGGGTTTCTTTGAGGTCACGCATGACATTT
FY439754       --> TGCTAGAGGAATCAGTGCTAAGGGTTTCTTTGAGGTCACGCATGACATTT
FY433441       --> TGCTAGAGGAATCAGTGCTAAGGGTTTCTTTGAGGTCACGCATGACATTT
FY438518       --> TGCTACAGGAATCAGTGCTAAGGGTTTCTTTGAGGTCACGCATGACATTT
FY436038       --> TGCTAGAGGAATCAGTGCTAAGGGTTTCTTTGAGGTCACGCATGACATTT
HS106937       --> TGCTAGAGGAATCAGTGCTAAGGGTTTCTTTGAGGTCACGCATGACATTT
FY434197       --> ..................................................
EY897089       --> ..................................................
HS106980       --> ..................................................
FY434935       --> ..................................................
FD987849       --> ..................................................
FD989084       --> ..................................................
EY913898       --> ..................................................
FD971152       --> ..................................................
FY445059       --> ..................................................
EX746124       --> ..................................................
EW714066       --> ..................................................
EW714067       --> ..................................................

               301    -    351
UN21581        --> CAAACCTCACTTGTGCTGACTTCCTCAGAGCCCCCGGTGTTCAAACTCCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY438891       <-- ..................................................
FY434250       <-- ..................................................
EV541613       <-- ..................................................
EY893497       <-- ..................................................
FD967360       <-- ..................................................
EX750604       <-- ..................................................
FD984907       <-- ..................................................
EW718561       <-- ..................................................
EW718824       <-- ..................................................
FY437566       <-- ..................................................
EV537371       --> CAAACCTCACTTGTGCTGACTTCCTCAGAGCCCCTGGTGTTCAAACTCCG
FY446962       --> CAAACCTCACTTGTGCTGACTTCCTCAGAGCCCCCGGTGTTCAAACTCCG
FY440158       --> CAAACCTCACTTGTGCTGACTTCCTCAGAGCCCCCGGTGTTCAAACTCCG
FY433432       --> CAAACCTCACTTGTGCTGACTTCCTCAGAGCCCCCGGTGTTCAAACTCCG
FY433520       --> CAAACCTCACTTGTGCTGACTTCCTCAGAGCCCCCGGTGTTCAAACTCCG
FY434661       --> CAAACCTCACTTGTGCTGACTTCCTCAGAGCCCCCGGTGTTCAAACTCCG
FY451360       --> CAAACCTCACTTGTGCTGACTTCCTCAGAGCCCCCGGTGTTCAAACTCCG
FY447877       --> CAAACCTCACTTGTGCTGACTTCCTCAGAGCCCCCGGTGTTCAAACTCCG
FY447722       --> CAAACCTCACTTGTGCTGACTTCCTCAGAGCCCCCGGTGTTCAAACTCCG
FY450122       --> CAAACCTCACTTGTGCTGACTTCCTCAGAGCCCCCGGTGTTCAAACTCCG
FY453994       --> CAAACCTCACTTGTGCTGACTTCCTCAGAGCCCCCGGTGTTCAAACTCCG
FY436125       --> CAAACCTCACTTGTGCTGACTTCCTCAGAGCCCCCGGTGTTCAAACTCCG
FY439754       --> CAAACCTCACTTGTGCTGACTTCCTCAGAGCCCCCGGTGTTCAAACTCCG
FY433441       --> CAAACCTCACTTGTGCTGACTTCCTCAGAGCCCCCGGTGTTCAAACTCCG
FY438518       --> CAAACCTCACTTGTGCTGACTTCCTCAGAGCCCCCGGTGTTCAAACTCCG
FY436038       --> CAAACCTCACTTGTGCTGACTTCCTCAGAGCCCCCGGTGTTCAAACTCCG
HS106937       --> CAAACCTCACTTGTGCTGACTTCCTCAGAGCCCCCGGTGTTCAAACTCCG
FY434197       --> ..........................................cAACTCCG
EY897089       --> ..................................................
HS106980       --> ..................................................
FY434935       --> ..................................................
FD987849       --> ..................................................
FD989084       --> ..................................................
EY913898       --> ..................................................
FD971152       --> ..................................................
FY445059       --> ..................................................
EX746124       --> ..................................................
EW714066       --> ..................................................
EW714067       --> ..................................................

               351    -    401
UN21581        --> GTCATTGTCCGTTTCTCCACAGTGGTTCACGAACGTGCCAGCCCTGAGAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY438891       <-- ..................................................
FY434250       <-- ..................................................
EV541613       <-- ..................................................
EY893497       <-- ..................................................
FD967360       <-- ..................................................
EX750604       <-- ..................................................
FD984907       <-- ..................................................
EW718561       <-- ..................................................
EW718824       <-- ..................................................
FY437566       <-- ..................................................
EV537371       --> GTCATTGTCCGTTTCTCCACTGTGGTTCATGAACGTGCCAGCCCTGAGAC
FY446962       --> GTCATTGTCCGTTTCTCCACAGTGGTTCACGAACGTGCCAGCCCTGAGAC
FY440158       --> GTCATTGTCCGTTTCTCCACAGTGGTTCACGAACGTGCCAGCCCTGAGAC
FY433432       --> GTCATTGTCCGTTTCTCCACAGTGGTTCACGAACGTGCCAGCCCTGAGAC
FY433520       --> GTCATTGTCCGTTTCTCCACAGTGGTTCACGAACGTGCCAGCCCTGAGAC
FY434661       --> GTCATTGTCCGTTTCTCCACAGTGGTTCACGAACGTGCCAGCCCTGAGAC
FY451360       --> GTCATTGTCCGTTTCTCCACAGTGGTTCACGAACGTGCCAGCCCTGAGAC
FY447877       --> GTCATTGTCCGTTTCTCCACAGTGGTTCACGAACGTGCCAGCCCTGAGAC
FY447722       --> GTCATTGTCCGTTTCTCCACAGTGGTTCACGAACGTGCCAGCCCTGAGAC
FY450122       --> GTCATTGTCCGTTTCTCCACAGTGGTTCACGAACGTGCCAGCCCTGAGAC
FY453994       --> GTCATTGTCCGTTTCTCCACAGTGGTTCACGAACGTGCCAGCCCTGAGAC
FY436125       --> GTCATTGTCCGTTTCTCCACAGTGGTTCACGAACGTGCCAGCCCTGAGAC
FY439754       --> GTCATTGTCCGTTTCTCCACAGTGGTTCACGAACGTGCCAGCCCTGAGAC
FY433441       --> GTCATTGTCCGTTTCTCCACAGTGGTTCACGAACGTGCCAGCCCTGAGAC
FY438518       --> GTCATTGTCCGTTTCTCCACAGTGGTTCACGAACGTGCCAGCCCTGAGAC
FY436038       --> GTCATTGTCCGTTTCTCCACAGTGGTTCACGAACGTGCCAGCCCTGAGAC
HS106937       --> GTCATTGTCCGTTTCTCCACAGTGGTTCACGAACGTGCCAGCCCTGAGAC
FY434197       --> GTCATTGTCCGTTTCTCCACAGTGGTTCACGAACGTGCCAGCCCTGAGAC
EY897089       --> ..................................................
HS106980       --> ..................................................
FY434935       --> ..................................................
FD987849       --> ..................................................
FD989084       --> ..................................................
EY913898       --> ..................................................
FD971152       --> ..................................................
FY445059       --> ..................................................
EX746124       --> ..................................................
EW714066       --> ..................................................
EW714067       --> ..................................................

               401    -    451
UN21581        --> CATGAGGGATATTCGCGGGTTCGCCGTCAAGTTTTACACCAGAGAGGGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY438891       <-- ..................................................
FY434250       <-- ..................................................
EV541613       <-- ..................................................
EY893497       <-- ..................................................
FD967360       <-- ..................................................
EX750604       <-- ..................................................
FD984907       <-- ..................................................
EW718561       <-- ..................................................
EW718824       <-- ..................................................
FY437566       <-- ..................................................
EV537371       --> CATGAGGGATATCCGCGGGTTCGCCGTCAAGTTTTACACCAGAGAGGGAA
FY446962       --> CATGAGGGATATTCGCGGGTTCGCCGTCAAGTTTTACACCAGAGAGGGAA
FY440158       --> CATGAGGGATATTCGCGGGTTCGCCGTCAAGTTTTACACCAGAGAGGGAA
FY433432       --> CATGAGGGATATTCGCGGGTTCGCCGTCAAGTTTTACACCAGAGAGGGAA
FY433520       --> CATGAGGGATATTCGCGGGTTCGCCGTCAAGTTTTACACCAGAGAGGGAA
FY434661       --> CATGAGGGATATTCGCGGGTTCGCCGTCAAGTTTTACACCAGAGAGGGAA
FY451360       --> CATGAGGGATATTCGCGGGTTCGCCGTCAAGTTTTACACCAGAGAGGGAA
FY447877       --> CATGAGGGATATTCGCGGGTTCGCCGTCAAGTTTTACACCAGAGAGGGAA
FY447722       --> CATGAGGGATATTCGCGGGTTCGCCGTCAAGTTTTACACCAGAGAGGGAA
FY450122       --> CATGAGGGATATTCGCGGGTTCGCCGTCAAGTTTTACACCAGAGAGGGAA
FY453994       --> CATGAGGGATATTCGCGGGTTCGCCGTCAAGTTTTACACCAGAGAGGGAA
FY436125       --> CATGAGGGATATTCGCGGGTTCGCCGTCAAGTTTTACACCAGAGAGGGAA
FY439754       --> CATGAGGGATATTCGCGGGTTCGCCGTCAAGTTTTACACCAGAGAGGGAA
FY433441       --> CATGAGGGATATTCGCGGGTTCGCCGTCAAGTTTTACACCAGAGAGGGAA
FY438518       --> CATGAGGGATATTCGCGGGTTCGCCGTCTAGTTTTACACCAGAGAGGGAA
FY436038       --> CATGAGGGATATTCGCGGGTTCGCCGTCAAGTTTTACACCAGAGAGGGAA
HS106937       --> CATGAGGGATATTCGCGGGTTCGCCGTCAAGTTTTACACCAGAGAGGGAA
FY434197       --> CATGAGGGATATTCGCGGGTTCGCCGTCAAGTTTTACACCAGAGAGGGAA
EY897089       --> ..................................................
HS106980       --> ..................................................
FY434935       --> ..................................................
FD987849       --> ..................................................
FD989084       --> ..................................................
EY913898       --> ..................................................
FD971152       --> ..................................................
FY445059       --> ..................................................
EX746124       --> ..................................................
EW714066       --> ..................................................
EW714067       --> ..................................................

               451    -    501
UN21581        --> ACTTTGATCTTGTTGGGAACAACACTCCGGTGTTCTTCATCAGAGACGGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY438891       <-- ..................................................
FY434250       <-- ..................................................
EV541613       <-- ..................................................
EY893497       <-- ..................................................
FD967360       <-- ..................................................
EX750604       <-- ..................................................
FD984907       <-- ..................................................
EW718561       <-- ..................................................
EW718824       <-- ..................................................
FY437566       <-- ..................................................
EV537371       --> ACTTTGATCTTGTTGGAAACAACACTCCGGTGTTCTTCATCAGAGACGGG
FY446962       --> ACTTTGATCTTGTTGGGAACAACACTCCGGTGTTCTTCATCAGAGACGGG
FY440158       --> ACTTTGATCTTGTTGGGAACAACACTCCGGTGTTCTTCATCAGAGACGGG
FY433432       --> ACTTTGATCTTGTTGGGAACAACACTCCGGTGTTCTTCATCAGAGACGGG
FY433520       --> ACTTTGATCTTGTTGGGAACAACACTCCGGTGTTCTTCATCAGAGACGGG
FY434661       --> ACTTTGATCTTGTTGGGAACAACACTCCGGTGTTCTTCATCAGAGACGGG
FY451360       --> ACTTTGATCTTGTTGGGAACAACACTCCGGTGTTCTTCATCAGAGACGGG
FY447877       --> ACTTTGATCTTGTTGGGAACAACACTCCGGTGTTCTTCATCAGAGACGGG
FY447722       --> ACTTTGATCTTGTTGGGAACAACACTCCGGTGTTCTTCATCAGAGACGGG
FY450122       --> ACTTTGATCTTGTTGGGAACAACACTCCGGTGTTCTTCATCAGAGACGGG
FY453994       --> ACTTTGATCTTGTTGGGAACAACACTCCGGTGTTCTTCATCAGAGACGGG
FY436125       --> ACTTTGATCTTGTTGGGAACAACACTCCGGTGTTCTTCATCAGAGACGGG
FY439754       --> ACTTTGATCTTGTTGGGAACAACACTCCGGTGTTCTTCATCAGAGACGGG
FY433441       --> ACTTTGATCTTGTTGGGAACAACACTCCGGTGTTCTTCATCAGAGACGGG
FY438518       --> ACTTTGATCTTGTTGGGAACAACACTCCGGTGTTCTTCATCAGAGACGGG
FY436038       --> ACTTTGATCTTGTTGGGAACAACACTCCGGTGTTCTTCATCAGAGACGGG
HS106937       --> ACTTTGATCTTGTTGGGAACAACACTCCGGTGTTCTTCATCAGAGACGGG
FY434197       --> ACTTTGATCTTGTTGGGAACAACACTCCGGTGTTCTTCATCAGAGACGGG
EY897089       --> ..............................gGTTCTTCATCAGAGACGGG
HS106980       --> ..................................................
FY434935       --> ..................................................
FD987849       --> ..................................................
FD989084       --> ..................................................
EY913898       --> ..................................................
FD971152       --> ..................................................
FY445059       --> ..................................................
EX746124       --> ..................................................
EW714066       --> ..................................................
EW714067       --> ..................................................

               501    -    551
UN21581        --> ATTCAGTTCCCGGATGTTGTCCACGCGCTGAAACCGAACCCCAAGACAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY438891       <-- ..................................................
FY434250       <-- ..................................................
EV541613       <-- ..................................................
EY893497       <-- ..................................................
FD967360       <-- ..................................................
EX750604       <-- ..................................................
FD984907       <-- ..................................................
EW718561       <-- ..................................................
EW718824       <-- ..................................................
FY437566       <-- ..................................................
EV537371       --> ATTCAGTTCCCGGATGTTGTCCACGCGCTGAAACCGAACCCCAAGACAAA
FY446962       --> ATTCAGTTCCCGGATGTTGTCCACGCGCTGAAACCGAACCCCAAGACAAA
FY440158       --> ATTCAGTTCCCGGATGTTGTCCACGCGCTGAAACCGAACCCCAAGACAAA
FY433432       --> ATTCAGTTCCCGGATGTTGTCCACGCGCTGAAACCGAACCCCAAGACAAA
FY433520       --> ATTCAGTTCCCGGATGTTGTCCACGCGCTGAAACCGAACCCCAAGACAAA
FY434661       --> ATTCAGTTCCCGGATGTTGTCCACGCGCTGAAACCGAACCCCAAGACAAA
FY451360       --> ATTCAGTTCCCGGATGTTGTCCACGCGCTGAAACCGAACCCCAAGACAAA
FY447877       --> ATTCAGTTCCCGGATGTTGTCCACGCGCTGAAACCGAACCCCAAGACAAA
FY447722       --> ATTCAGTTCCCGGATGTTGTCCACGCGCTGAAACCGAACCCCAAGACAAA
FY450122       --> ATTCAGTTCCCGGATGTTGTCCACGCGCTGAAACCGAACCCCAAGACAAA
FY453994       --> ATTCAGTTCCCGGATGTTGTCCACGCGCTGAAACCGAACCC-AAGACAAA
FY436125       --> ATTCAGTTCCCGGATGTTGTCCACGCGCTGAAACCGAACCCCAAGACAAA
FY439754       --> ATTCAGTTCCCGGATGTTGTCCACGCGCTGAAACCGAACCCCAAGACAAA
FY433441       --> ATTCAGTTCCCGGATGTTGTCCACGCGCTGAAACCGAACCCCAAGACAAA
FY438518       --> ATTCAGTTCCCGGATGTTGTCCACGCGCTGAAACCGAACCCCTCGACTAA
FY436038       --> ATTCAGTTCCCGGATGTTGTCCACGCGCTGAAACCGAACCCCAAGACAAA
HS106937       --> ATTCAGTTCCCGGATGTTGTCCACGCGCTGAAACCGAACCCCAAGACAAA
FY434197       --> ATTCAGTTCCCGGATGTTGTCCACGCGCTGAAACCGAACCCCAAGACAAA
EY897089       --> ATTCAGTTCCCGGATGTTGTCCACGCGCTGAAACCGAACCCCAAGACAAA
HS106980       --> ......................................gcacgaggCAAA
FY434935       --> ..................................................
FD987849       --> ..................................................
FD989084       --> ..................................................
EY913898       --> ..................................................
FD971152       --> ..................................................
FY445059       --> ..................................................
EX746124       --> ..................................................
EW714066       --> ..................................................
EW714067       --> ..................................................

               551    -    601
UN21581        --> CATCCAAGAGTACTGGAGGATACTGGACTACATGTCCCACTTACCAGAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY438891       <-- ..................................................
FY434250       <-- ..................................................
EV541613       <-- ..................................................
EY893497       <-- ..................................................
FD967360       <-- ..................................................
EX750604       <-- ..................................................
FD984907       <-- ..................................................
EW718561       <-- ..................................................
EW718824       <-- ..................................................
FY437566       <-- ..................................................
EV537371       --> CATCCAAGAGTACTGGAGGATACTGGACTACATGTCCCACTTACCAGAGA
FY446962       --> CATCCAAGAGTACTGGAGGATACTGGACTACATGTCCCACTTACCAGAGA
FY440158       --> CATCCAAGAGTACTGGAGGATACTGGACTACATGTCCCACTTACCAGAGA
FY433432       --> CATCCAAGAGTACTGGAGGATACTGGACTACATGTCCCACTTACCAGAGA
FY433520       --> CATCCAAGAGTACTGGAGGATACTGGACTACATGTCCCACTTACCAGAGA
FY434661       --> CATCCAAGAGTACTGGAGGATACTGGACTACATGTCCCACTTACCAGAGA
FY451360       --> CATCCAAGAGTACTGGAGGATACTGGACTACATGTCCCACTTACCAGAGA
FY447877       --> CATCCAAGAGTACTGGAGGATACTGGACTACATGTCCCACTTACCAGAGA
FY447722       --> CATCCAAGAGTACTGGAGGATACTGGACTACATGTCCCACTTACCAGAGA
FY450122       --> CATCCAAGAGTACTGGAGGATACTGGACTACATGTCCCACTTACCAGAGA
FY453994       --> CATCCAAGAGTACTGGAGGATACTGGACTACATGTCCCACTTACCAGAGA
FY436125       --> CATCCAAGAGTACTGGAGGATACTGGACTACATGTCCCACTTACCAGAGA
FY439754       --> CATCCAAGAGTACTGGAGGATACTGGACTACATGTCCCACTTACCAGAGA
FY433441       --> CATCCAAGAGTACTGGAGGATACTGGACTACATGTCCCACTTACCAGAGA
FY438518       --> CATCCAAGAGTACTGGAGGATACTGGACTACATGTCCCACTTACCAGAGA
FY436038       --> CATCCAAGAGTACTGGAGGATACTGGACTACATGTCCCACTTACCAGAGA
HS106937       --> CATCCAAGAGTACTGGAGGATACTGGACTACATGTCCCACTTACCAGAGA
FY434197       --> CATCCAAGAGTACTGGAGGATACTGGACTACATGTCCCACTTACCAGAGA
EY897089       --> CATCCAAGAGTACTGGAGGATACTGGACTACATGTCCCACTTACCAGAGA
HS106980       --> CATCCAAGAGTACTGGAGGATACTGGACTACATGTCCCACTTACCAGAGA
FY434935       --> ..................................................
FD987849       --> ..................................................
FD989084       --> ..................................................
EY913898       --> ..................................................
FD971152       --> ..................................................
FY445059       --> ..................................................
EX746124       --> ..................................................
EW714066       --> ..................................................
EW714067       --> ..................................................

               601    -    651
UN21581        --> GCTTGCTCACATGGTGCTGGATGTTTGATGATGTTGGTATCCCACAAGAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY438891       <-- ..................................................
FY434250       <-- ..................................................
EV541613       <-- ..................................................
EY893497       <-- ..................................................
FD967360       <-- ..................................................
EX750604       <-- ..................................................
FD984907       <-- ..................................................
EW718561       <-- ..................................................
EW718824       <-- ..................................................
FY437566       <-- ..................................................
EV537371       --> GCTTGCTCACATGGTGCTGGATGTTTGATGATGTTGGTATCCCACAAGAT
FY446962       --> GCTTGCTCACATGGTGCTGGATGTTTGATGATGTTGGTATCCCACAAGAC
FY440158       --> GCTTGCTCACATGGTGCTGGATGTTTGATGATGTTGGTATCCCACAAGAC
FY433432       --> GCTTGCTCACATGGTGCTGGATGTTTGATGATGTTGGTATCCCACAAGAC
FY433520       --> GCTTGCTCACATGGTGCTGGATGTTTGATGATGTTGGTATCCCACAAGAC
FY434661       --> GCTTGCTCACATGGTGCTGGATGTTTGATGATGTTGGTATCCCACAAGAC
FY451360       --> GCTTGCTCACATGGTGCTGGATGTTTGATGATGTTGGTATCCCACAAGAC
FY447877       --> GCTTGCTCACATGGTGCTGGATGTTTGATGATGTTGGTATCCCACAAGAC
FY447722       --> GCTTGCTCACATGGTGCTGGATGTTTGATGATGTTGGTATCCCACAAGAC
FY450122       --> GCTTGCTCACATGGTGCTGGATGTTTGATGATGTTGGTATCCCACAAGAC
FY453994       --> GCTTGCTCACATGGTGCTGGATGTTTGATGATGTTGGTATCCCACAAGAC
FY436125       --> GCTTGCTCACATGGTGCTGGATGTTTGATGATGTTGGTATCCCACAAGAC
FY439754       --> GCTTGCTCACATGGTGCTGGATGTTTGATGATGTTGGTATCCCACAAGAC
FY433441       --> GCTTGCTCACATGGTGCTGGATGTTTGATGATGTTGGTATCCCACAAGAC
FY438518       --> GCTTGCTCACATGGTGCTGGATGTTTGATGATGTTGGTATCCCACAAGAC
FY436038       --> GCTTGCTCACATGGTGCTGGATGTTTGATGATGTTGGTATCCCACAAGAC
HS106937       --> GCTTGCTCACATGGTGCTGGATGTTTGATGATGTTGGTATCCCACAAGAC
FY434197       --> GCTTGCTCACATGGTGCTGGATGTTTGATGATGTTGGTATCCCACAAGAC
EY897089       --> GCTTGCTCGCATGGTGCTGGATGTTTGATGATGTTGGTATCCCACAAGAC
HS106980       --> GCTTGCTCACATGGTGCTGGATGTTTGATGATGTTGGTATCCCACAAGAC
FY434935       --> ...................GATGTTTGATGATGTTGGTATCCCACAAGAC
FD987849       --> ..................................................
FD989084       --> ..................................................
EY913898       --> ..................................................
FD971152       --> ..................................................
FY445059       --> ..................................................
EX746124       --> ..................................................
EW714066       --> ..................................................
EW714067       --> ..................................................

               651    -    701
UN21581        --> TACAGGCACATGGAAGGTTTCGGTGTCCACACATACACTCTAGTTTCCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY438891       <-- ..................................................
FY434250       <-- ..................................................
EV541613       <-- ..................................................
EY893497       <-- ..................................................
FD967360       <-- ..................................................
EX750604       <-- ..................................................
FD984907       <-- ..................................................
EW718561       <-- ..................................................
EW718824       <-- ..................................................
FY437566       <-- ..................................................
EV537371       --> TACCGACACATGG.....................................
FY446962       --> TACAGGCACATGGAAGGTTTCGGTGTCCACACATACACTCTAGTTTCCAA
FY440158       --> TACAGGCACATGGAAGGTTTCGGTGTCCACACATACACTCTAGTTTCCAA
FY433432       --> TACAGGCACATGGAAGGTTTCGGTGTCCACACATACACTCTAGTTTCCAA
FY433520       --> TACAGGCACATGGAAGGTTTCGGTGTCCACACATACACTCTAGTTTCCAA
FY434661       --> TACAGGCACATGGAAGGTTTCGGTGTCCACACATACACTCTAGTTTCCAA
FY451360       --> TACAGGCACATGGAAGGTTTCGGTGTCCACACATACACTCTAGTTTCCAA
FY447877       --> TACAGGCACATGGAAGGTTTCGGTGTCCACACATACACTCTAGTTTCCAA
FY447722       --> TACAGGCACATGGAAGGTTTCGGTGTCCACACATACACTCTAGTTTCCAA
FY450122       --> TACAGGCACATGGAAGGTTTCGGTGTCCACACATACACTCTAGTTTCCAA
FY453994       --> TACAGGCACATGGAAGGTTTCGGTGTCCACACATACACTCTAGTTTCCAA
FY436125       --> TACAGGCACATGGAAGGTTTCGGTGTCCACACATACACTCTAGTTTCCAA
FY439754       --> TACAGGCACATGGAAGGTTTCGGTGTCCACACATACACTCTAGTTTCCAA
FY433441       --> TACAGGCACATGGAAGGTTTCGGTGTCCACACATACACTCTAGTTTCCAA
FY438518       --> TACAGGCACATGGAAGGTTTCGGTGTCCACACATACACTCTAGTTTCCAA
FY436038       --> TACAGGCACATGGAAGGTTTCGGTGTCCACACATACACTCTAGTTTCCAA
HS106937       --> TACAGGCACATGGAAGGTTTCGGTGTCCACACATACACTCTAGTTTCCAA
FY434197       --> TACAGGCACATGGAAGGTTTCGGTGTCCACACATACACTCTAGTTTCCAA
EY897089       --> TACAGGCACATGGAAGGTTTCGGTGTCCACACATACACTCTAGTTTCCAA
HS106980       --> TACAGGCACATGGAAGGTTTCGGTGTCCACACATACACTCTAGTTTCCAA
FY434935       --> TACAGGCACATGGAAGGTTTCGGTGTCCACACATACACTCTAGTTTCCAA
FD987849       --> ..................................................
FD989084       --> ..................................................
EY913898       --> ..................................................
FD971152       --> ..................................................
FY445059       --> ..................................................
EX746124       --> ..................................................
EW714066       --> ..................................................
EW714067       --> ..................................................

               701    -    751
UN21581        --> ATCTGGAAAAGTTCTCTTTGTGAAGTTCCACTGGAAACCTACTTGTGGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY438891       <-- ..................................................
FY434250       <-- ..................................................
EV541613       <-- ..................................................
EY893497       <-- ..................................................
FD967360       <-- ..................................................
EX750604       <-- ..................................................
FD984907       <-- ..................................................
EW718561       <-- ..................................................
EW718824       <-- ..................................................
FY437566       <-- ..................................................
EV537371       --> ..................................................
FY446962       --> ATCTGGAAAAGTTCTCTTT...............................
FY440158       --> ATCTGGAAAAGTTCTCTTTGTGAAGTTCCACTGGAAACCTACTTGTGGGA
FY433432       --> ATCTGGAAAAGTTCTCTTTGTGAAGTTCCACTGGAAACCTACTTGTGGGA
FY433520       --> ATCTGGAAAAGTTCTCTTTGTGAAGTTCCACTGGAAACCTACTTGTGGGA
FY434661       --> ATCTGGAAAAGTTCTCTTTGTGAAGTTCCACTGGAAACCTACTTGTGGGA
FY451360       --> ATCTGGAAAAGTTCTCTTTGTGAAGTTCCACTGGAAACCTACTTGTGGGA
FY447877       --> ATCTGGAAAAGTTCTCTTTGTGAAGTTCCACTGGAAACCTACTTGTGGGA
FY447722       --> ATCTGGAAAAGTTCTCTTTGTGAAGTTCCACTGGAAACCTACTTGTGGGA
FY450122       --> ATCTGGAAAAGTTCTCTTTGTGAAGTTCCACTGGAAACCTACTTGTGGGA
FY453994       --> ATCTGGAAAAGTTCTCTTTGTGAAGTTCCACTGGAAACCTACTTGTGGGA
FY436125       --> ATCTGGAAAAGTTCTCTTTGTGAAGTTCCACTGGAAACCTACTTGTGGGA
FY439754       --> ATCTGGAAAAGTTCTCTTTGTGAAGTTCCACTGGAAACCTACTTGTGGGA
FY433441       --> ATCTGGAAAAGTTCTCTTTGTGAAGTTCCACTGGAAACCTACTTGTGGGA
FY438518       --> ATCTGGAAAAGTTCTCTTTGTGAAGTTCCACTGGAAACCTACTTGTGGGA
FY436038       --> ATCTGGAAAAGTTCTCTTTGTGAAGTTCCACTGGAAACCTACTTGTGGGA
HS106937       --> ATCTGGAAAAGTTCTCTTTGTGAAGTTCCACTGGAAACCTACTTGTGGGA
FY434197       --> ATCTGGAAAAGTTCTCTTTGTGAAGTTCCACTGGAAACCTACTTGTGGGA
EY897089       --> ATCTAGAAAAGTTCTCTTTGTGAAGTTCCACTGGAAACCTACTTGTGGGA
HS106980       --> ATCTGGAAAAGTTCTCTTTGTGAAGTTCCACTGGAAACCTACTTGTGGGA
FY434935       --> ATCTGGAAAAGTTCTCTTTGTGAAGTTCCACTGGAAACCTACTTGTGGGA
FD987849       --> ..................................................
FD989084       --> ..................................................
EY913898       --> ..................................................
FD971152       --> ..................................................
FY445059       --> ..................................................
EX746124       --> ..................................................
EW714066       --> ..................................................
EW714067       --> ..................................................

               751    -    801
UN21581        --> TCAAGAATCTAACTGATGAAGAGGCCAAAGTGGTTGGAGGAGCCAATCAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY438891       <-- ..................................................
FY434250       <-- ..................................................
EV541613       <-- ..................................................
EY893497       <-- ..................................................
FD967360       <-- ..................................................
EX750604       <-- ..................................................
FD984907       <-- ..................................................
EW718561       <-- ..................................................
EW718824       <-- ..................................................
FY437566       <-- ..................................................
EV537371       --> ..................................................
FY446962       --> ..................................................
FY440158       --> TCAAGAATCTAACTGATGAAGAGGCCAAAGTGGTTGGAGGAGCCAATCAC
FY433432       --> TCAAGAATCTAACTGATGAAGAGGCCAAAGTGGTTGGAGGAGCCAATCAC
FY433520       --> TCAAGAATCTAACTGATGAAGAGGCCAAAGTGGTTGGAGGAGCCAATCAC
FY434661       --> TCAAGAATCTAACTGATGAAGAGGCCAAAGTGGTTGGAGGAGCCAATCAC
FY451360       --> TCAAGAATCTAACTGATGAAGAGGCCAAAGTGGTTGGAGGAGCCAATCAC
FY447877       --> TCAAGAATCTAACTGATGAAGAGGCCAAAGTGGTTGGAGGAGCCAATCAC
FY447722       --> TCAAGAATCTAACTGATGAAGAGGCCAAAGTGGTTGGAGGAGCCAATCAC
FY450122       --> TCAAGAATCTAACTGATGAAGAGGCCAAAGTGGTTGGAGGAGCCAATCAC
FY453994       --> TCAAGAATCTAACTGATGAAGAGGCCAAAGTGGTTGGAGGAGCCAATCAC
FY436125       --> TCAAGAATCTAACTGATGAAGAGGCCAAAGTGGTTGGAGGAGCCAATCAC
FY439754       --> TCAAGAATCTAACTGATGAAGAGGCCAAAGTGGTTGGAGGAGCCAATCAC
FY433441       --> TCAAGAATCTAACTGATGAAGAGGCCAAAGTGGTTGGAGGAGCCAATCAC
FY438518       --> TCAAGAATCTAACTGATGAACAGGCCAAAGTGGTTGGAGGAGCCAATCAC
FY436038       --> TCAAGAATCTAACTGATGAAGAGGCCAAAGTGGTTGGAGGAGCCAATCAC
HS106937       --> TCAAGAATCTAACTGATGAAGAGGCCAAAGTGGTTGGAGGAGCCAATCAC
FY434197       --> TCAAGAATCTAACTGATGAAGAGGCCAAAGTGGTTGGAGGAGCCAATCAC
EY897089       --> TCAAGAATCTAACTGATGAAGAGGCCAAAGTGGTTGGAGGAGCCAATCAC
HS106980       --> TCAAGAATCTAACTGATGAAGAGGCCAAAGTGGTTGGAGGAGCCAATCAC
FY434935       --> TCAAGAATCTAACTGATGAAGAGGCCAAAGTGGTTGGAGGAGCCAATCAC
FD987849       --> ............................gGTGGTTGGAGGAGCCAATCAC
FD989084       --> ............................gGTGGTTGGAGGAGCCAATCAC
EY913898       --> ..................................................
FD971152       --> ..................................................
FY445059       --> ..................................................
EX746124       --> ..................................................
EW714066       --> ..................................................
EW714067       --> ..................................................

               801    -    851
UN21581        --> AGCCACGCAACTAAGGATCTCCATGATGCTATTGCATCTGGTAACTATCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY438891       <-- ..................................................
FY434250       <-- ..................................................
EV541613       <-- ..................................................
EY893497       <-- ..................................................
FD967360       <-- ..................................................
EX750604       <-- ..................................................
FD984907       <-- ..................................................
EW718561       <-- ..................................................
EW718824       <-- ..................................................
FY437566       <-- ..................................................
EV537371       --> ..................................................
FY446962       --> ..................................................
FY440158       --> AGCCACGCAACTAAGGATCTCCATGATGCTATTGCATCTGGTAACTATCC
FY433432       --> AGCCACGCAACTAAGGATCTCCATGATGCTATTGCATCTGGTAACTATCC
FY433520       --> AGCCACGCAACTAAGGATCTCCATGATGCTATTGCATCTGGTAACTATCC
FY434661       --> AGCCACGCAACTAAGGATCTCCATGATGCTATTGCATCTGGTAACTATCC
FY451360       --> AGCCACGCAACTAAGGATCTCCATGATGCTATTGCATCTGGTAACTATCC
FY447877       --> AGCCACGCAACTAAGGATCTCCATGATGCTATTGCATCTGGTAACTATCC
FY447722       --> AGCCACGCAACTAAGGATCTCCATGATGCTATTGCATCTGGTAACTATCC
FY450122       --> AGCCACGCAACTAAGGATCTCCATGATGCTATTGCATCTGGTAACTATCC
FY453994       --> AGCCACGCAACTAAGGATCTCCATGATGCTATTGCATCTGGTAACTATCC
FY436125       --> AGCCACGCAACTAAGGATCTCCATGATGCTATTGCATCTGGTAACTATCC
FY439754       --> AGCCACGCAACTAAGGATCTCCATGATGCTATTGCATCTGGTAACTATCC
FY433441       --> AGCCACGCAACTAAGGATCTCCATGATGCTATTGCATCTGGTAACTATCC
FY438518       --> AGCCACGCAACTAAGGATCTCCATGATGCTATTGCATCTGGTAACTATCC
FY436038       --> AGCCACGCAACTAAGGATCTCCATGATGCTATTGCATCTGGTAACTATCC
HS106937       --> AGCCACGCAACTAAGGATCTCCATGATGCTATTGCATCTGGTAACTATCC
FY434197       --> AGCCACGCAACTAAGGATCTCCATGATGCTATTGCATCTGGTAACTATCC
EY897089       --> AGCCACGCAACTAAGGATCTCCATGATGCTATTGCATCTGGTAACTATCC
HS106980       --> AGCCACGCAACTAAGGATCTCCATGATGCTATTGCATCTGGTAACTATCC
FY434935       --> AGCCACGCAACTAAGGATCTCCATGATGCTATTGCATCTGGTAACTATCC
FD987849       --> AGCCACGCAACTAAGGATCTCCATGATGCTATTGCATCTGGTAACTATCC
FD989084       --> AGCCACGCAACTAAGGATCTCCATGATGCTATTGCATCTGGTAACTATCC
EY913898       --> .....gGCAACTAAGGATCTCCATGATGCTATTGCATCTGGTAACTATCC
FD971152       --> ..................................................
FY445059       --> ..................................................
EX746124       --> ..................................................
EW714066       --> ..................................................
EW714067       --> ..................................................

               851    -    901
UN21581        --> TGAGTGGAAGCTTTTCATCCAGACAATGGATCCTGCGGATGAGGATAAGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY438891       <-- ......GAAGCTTT-CATCCAGACAATGGATCCTGCGGATGAGGATAAGT
FY434250       <-- ..................................................
EV541613       <-- ..................................................
EY893497       <-- ..................................................
FD967360       <-- ..................................................
EX750604       <-- ..................................................
FD984907       <-- ..................................................
EW718561       <-- ..................................................
EW718824       <-- ..................................................
FY437566       <-- ..................................................
EV537371       --> ..................................................
FY446962       --> ..................................................
FY440158       --> TGAGTGGAAGCTTTTCATCCAG............................
FY433432       --> TGAGTGGAAGCTTTTCATCCAGACAATGGATCCTGCGGA...........
FY433520       --> TGAGTGGAAGCTTTTCATCCAGACAATGGATCCTGCGGATGAGGATAAGT
FY434661       --> TGAGTGGAAGCTTTTCATCCAGACAATGGATCCTGCGGA...........
FY451360       --> TGAGTGGAAGCTTTTC..................................
FY447877       --> T.................................................
FY447722       --> TG................................................
FY450122       --> TGAGTGGAAGCTTTTCATCCAGACAATGGATCCTGCGGATGAG.......
FY453994       --> TGAGTGGAAGCTTTTCATCCAGACAATGGATCCTGCGGATGAGGATAAGT
FY436125       --> TGAGTGGAAGCTTTTCATCCAGACAATGGATCCTGCGGATGAGGATAAGT
FY439754       --> TGAGTGGAAGCTTTTCATCCAGACAATGGATCCTGCGGATGAGGATAAAG
FY433441       --> TGAGTGGAAGCTTTTCATCCAGACAATGGATCCTGCGGATGAGGATAAGT
FY438518       --> TGAGTGGAAGCTTTTCATCCAGACAATGGATCCTGCGGATGAGGATAAGT
FY436038       --> TGAGTGGAAGCTTTTCATCCAGACAATGGATCCTGCGGATGAGGATAAGT
HS106937       --> TGAGTGGAAGCTTTTCATCCAGACAATGGATCCTGCGGATGAG.......
FY434197       --> TGAGTGGAAGCTTTTCATCCAGACAATGGATCCTGCGGATGAGGATAAGT
EY897089       --> TGAGTGGAAGCTTTTCATCCAGACGATGGATCCTGCGGATGAGGATAAGT
HS106980       --> TGAGTGGAAGCTTTTCATCCAGACAATGGATCCTGCGGATGAGGATAAGT
FY434935       --> TGAGTGGAAGCTTTTCATCCAGACAATGGATCCTGCGGATGAGGATAAGT
FD987849       --> TGAGTGGAAGCTTTTCATCCAGACGATGGATCCTGCGGATGAGGATAAGT
FD989084       --> TGAGTGGAAGCTTTTCATCCAGACGATGGATCCTGCGGATGAGGATAAGT
EY913898       --> CGAGTGGAAGCTTTTCATCCAGACAATGGATCCTGCGGATGAGGATAAGT
FD971152       --> ..................................................
FY445059       --> ..................................................
EX746124       --> ..................................................
EW714066       --> ..................................................
EW714067       --> ..................................................

               901    -    951
UN21581        --> TTGATTTCGACCCGCTTGATGTGACCAAGATCTGGCCTGAGGATATCTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY438891       <-- TTGATTTCGACCCGCTTGATGTGACCAAGATCTGGCCTGAGGATATCTTG
FY434250       <-- ..................ATGTGACCAAGATCTGGCCTGAGGATATCTTG
EV541613       <-- ........................................GGATATCTTG
EY893497       <-- ..................................................
FD967360       <-- ..................................................
EX750604       <-- ..................................................
FD984907       <-- ..................................................
EW718561       <-- ..................................................
EW718824       <-- ..................................................
FY437566       <-- ..................................................
EV537371       --> ..................................................
FY446962       --> ..................................................
FY440158       --> ..................................................
FY433432       --> ..................................................
FY433520       --> TTGATTTCGACCCGCTTGATGTGA..........................
FY434661       --> ..................................................
FY451360       --> ..................................................
FY447877       --> ..................................................
FY447722       --> ..................................................
FY450122       --> ..................................................
FY453994       --> TTGATTTCGACCCGCTTGATGTGA..........................
FY436125       --> TTGATTTCGACCCGCTTGATGTGAC.........................
FY439754       --> TTGATTTCGACCCGCTTGATGTGACCAAGATCTGGCCT............
FY433441       --> TTGATTTCGACCCGCTTGATGTGAC.........................
FY438518       --> TTGATTTCGACC......................................
FY436038       --> TTGATTTCGACCCGCTTGATGTGACCCAGATCTGGCCTGAGGATATCTTG
HS106937       --> ..................................................
FY434197       --> TTGATTTCGACCCGCTTGATGTGACCAAGATCTGGCCTGAGGATATCTTG
EY897089       --> TTGATTTCGACCCGCTTGATGTGACCAAAATCTGGCCTGAGGATATCTTG
HS106980       --> TTGATTTCGACCCGCTTGATGTGACCAAGATCTGGCCTGAGGATATCTTG
FY434935       --> TTGATTTCGACCCGCTTGATGTGACCAAGATCTGGCCTGAGGATATCTTG
FD987849       --> TTGATTTCGACCCGCTTGATGTGACCAAAATCTGGCCTGAGGATATCTTG
FD989084       --> TTGATTTCGACCCGCTTGATGTGACCAAAATCTGGCCTGAGGATATCTTG
EY913898       --> TTGATTTCGACCCGCTTGATGTGACCAAGATCTGGCCTGAGGATATCTTG
FD971152       --> ..................................................
FY445059       --> ..................................................
EX746124       --> ..................................................
EW714066       --> ..................................................
EW714067       --> ..................................................

               951    -   1001
UN21581        --> CCTTTGCAACCAGTTGGTCGCTTGGTTTTGAACAGGACCATTGATAACTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY438891       <-- CCTTTGCAACCAGTTGGTCGCTTGGTTTTGAACAGGACCATTGATAACTT  Raphanus sativus cv GSK3-1
FY434250       <-- CCTTTGCAACCAGTTGGTCGCTTGGTTTTGAACAGGACCATTGATAACTT  Raphanus sativus cv GSK3-1
EV541613       <-- CCTTTGCAGCCAGTTGGTCGTTTGGTTCTGAACAGGACCATTGATAACTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY893497       <-- ...............................ACAGGACCATTGATAATTT  Raphanus raphanistrum subsp. maritimus
FD967360       <-- ..................................GGACCATTGATAACTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX750604       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD984907       <-- ..................................................  Raphanus raphanistrum subsp. landra
EW718561       <-- ..................................................  Raphanus sativus var. oleiformis
EW718824       <-- ..................................................  Raphanus sativus var. oleiformis
FY437566       <-- ..................................................  Raphanus sativus cv GSK3-1
EV537371       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FY446962       --> ..................................................  Raphanus sativus cv GSK3-1
FY440158       --> ..................................................  Raphanus sativus cv GSK3-1
FY433432       --> ..................................................  Raphanus sativus cv GSK3-1
FY433520       --> ..................................................  Raphanus sativus cv GSK3-1
FY434661       --> ..................................................  Raphanus sativus cv GSK3-1
FY451360       --> ..................................................  Raphanus sativus cv GSK3-1
FY447877       --> ..................................................  Raphanus sativus cv GSK3-1
FY447722       --> ..................................................  Raphanus sativus cv GSK3-1
FY450122       --> ..................................................  Raphanus sativus cv GSK3-1
FY453994       --> ..................................................  Raphanus sativus cv GSK3-1
FY436125       --> ..................................................  Raphanus sativus cv GSK3-1
FY439754       --> ..................................................  Raphanus sativus cv GSK3-1
FY433441       --> ..................................................  Raphanus sativus cv GSK3-1
FY438518       --> ..................................................  Raphanus sativus cv GSK3-1
FY436038       --> C.................................................  Raphanus sativus cv GSK3-1
HS106937       --> ..................................................  Raphanus sativus var. niger
FY434197       --> CCTTTGCAACCAGTTGGTCGCTTGGTTTTGAACAGGACCATTGATAACTT  Raphanus sativus cv GSK3-1
EY897089       --> CCTTTGCAACCAGTTGGTCGCTTGGTTTTGAACAGGACCATTGATAATTT  Raphanus raphanistrum subsp. maritimus
HS106980       --> CCTTTGCAACCAGTTGGTCGCTTGGTTTTGAACAGGACCATTGATAACTT  Raphanus sativus var. niger
FY434935       --> CCTTTGCAACCAGTTGGTCGCTTGGTTTTGAACAGGACCATTGATAACTT  Raphanus sativus cv GSK3-1
FD987849       --> CCTTTGCAACCAGTTGGTCGCTTGGTTTTGAACAGGACCATTGATAATTT  Raphanus raphanistrum subsp. landra
FD989084       --> CCTTTGCAACCAGTTGGTCGCTTGGTTTTGAACAGGACCATTGATAATTT  Raphanus raphanistrum subsp. landra
EY913898       --> CCTTTGCAACCAGTTGGTCGCTTGGTTCTGAACAGGACCATCGATAACTT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD971152       --> .................................gGGACCATTGATAACTT  Raphanus raphanistrum subsp. raphanistrum (MS)
FY445059       --> ..................................................  Raphanus sativus cv GSK3-1
EX746124       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EW714066       --> ..................................................  Raphanus sativus var. oleiformis
EW714067       --> ..................................................  Raphanus sativus var. oleiformis

               1001   -   1051
UN21581        --> CTTCAATGAAACTGAGCAGCTTGCTTTCAACCCTGGTCTTGTGGTTCCTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY438891       <-- CTTCAATGAAACTGAGCAGCTTGCTTTCAACCCTGGTCTTGTGGTTCCTG
FY434250       <-- CTTCAATGAAACTGAGCAGCTTGCTTTCAACCCTGGTCTTGTGGTTCCTG
EV541613       <-- CTTCAATGAAACTGAGCAGCTTGCTTTCAACCCTGGTCTTGTGGTTCCTG
EY893497       <-- CTTCAATGAAACTGAGCAGCTTGCTTTCAACCCTGGTCTTGTGGTTCCTG
FD967360       <-- CTTCAATGAAACTGAGCAGCTTGCTTTCAACCCTGGTCTTGTGGTTCCTG
EX750604       <-- ..................................................
FD984907       <-- ..................................................
EW718561       <-- ..................................................
EW718824       <-- ..................................................
FY437566       <-- ..................................................
EV537371       --> ..................................................
FY446962       --> ..................................................
FY440158       --> ..................................................
FY433432       --> ..................................................
FY433520       --> ..................................................
FY434661       --> ..................................................
FY451360       --> ..................................................
FY447877       --> ..................................................
FY447722       --> ..................................................
FY450122       --> ..................................................
FY453994       --> ..................................................
FY436125       --> ..................................................
FY439754       --> ..................................................
FY433441       --> ..................................................
FY438518       --> ..................................................
FY436038       --> ..................................................
HS106937       --> ..................................................
FY434197       --> CTTCAATGAAACTGAGCAGCTTGCTTTCAACCCTGGTCTTGTGGTTCCTG
EY897089       --> CTTCAATGAAACTGAGCAGCTTGCTTTCAACCCTGGTCTTGTGGTTCCTG
HS106980       --> CTTCAATGAAACTGAGCAGCTTGCTTTCAACCCTGGTCTTGTGGTTCCTG
FY434935       --> CTTCAATGAAACTGAGCAGCTTGCTTTCAACCCTGGTCTTGTGGTTCCTG
FD987849       --> CTTCAATGAAACTGAGCAGCTTGCTTTCAACCCTGGTCTTGTGGTTCCTG
FD989084       --> CTTCAATGAAACTGAGCAGCTTGCTTTCAACCCTGGTCTTGTGGTTCCTG
EY913898       --> CTTCAATGAAACTGAGCAGCTTGCTTTCAACCCTGGTCTTGTGGTTCCTG
FD971152       --> CTTCAATGAAACTGAGCAGCTTGCTTTCAACCCTGGTCTTGTGGTTCCTG
FY445059       --> ..................................................
EX746124       --> ..................................................
EW714066       --> ..................................................
EW714067       --> ..................................................

               1051   -   1101
UN21581        --> GGATCTACTACTCTGATGATAAGCTTCTCCAGTGTAGGATCTTTGCTTAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY438891       <-- GGATCTACTACTCTGATGATAAGCTTCTCCAGTGTAGGATCTTTGCTTAT  Raphanus sativus cv GSK3-1
FY434250       <-- GGATCTACTACTCTGATGATAAGCTTCTCCAGTGTAGGATCTTTGCTTAT  Raphanus sativus cv GSK3-1
EV541613       <-- GGATCTACTACTCAGATGATAAGCTTCTCCAGTGTAGGATCTTTGCTTAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY893497       <-- GGATCTACTACTCTGATGATAAGCTTCTCCAGTGTAGGATCTTTGCTTAT  Raphanus raphanistrum subsp. maritimus
FD967360       <-- GGATCTACTACTCAGATGATAAGCTTCTCCAGTGTAGGATCTTTGCTTAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX750604       <-- ..........................................gTGCTTAT  Raphanus raphanistrum subsp. maritimus
FD984907       <-- ..................................................  Raphanus raphanistrum subsp. landra
EW718561       <-- ..................................................  Raphanus sativus var. oleiformis
EW718824       <-- ..................................................  Raphanus sativus var. oleiformis
FY437566       <-- ..................................................  Raphanus sativus cv GSK3-1
EV537371       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FY446962       --> ..................................................  Raphanus sativus cv GSK3-1
FY440158       --> ..................................................  Raphanus sativus cv GSK3-1
FY433432       --> ..................................................  Raphanus sativus cv GSK3-1
FY433520       --> ..................................................  Raphanus sativus cv GSK3-1
FY434661       --> ..................................................  Raphanus sativus cv GSK3-1
FY451360       --> ..................................................  Raphanus sativus cv GSK3-1
FY447877       --> ..................................................  Raphanus sativus cv GSK3-1
FY447722       --> ..................................................  Raphanus sativus cv GSK3-1
FY450122       --> ..................................................  Raphanus sativus cv GSK3-1
FY453994       --> ..................................................  Raphanus sativus cv GSK3-1
FY436125       --> ..................................................  Raphanus sativus cv GSK3-1
FY439754       --> ..................................................  Raphanus sativus cv GSK3-1
FY433441       --> ..................................................  Raphanus sativus cv GSK3-1
FY438518       --> ..................................................  Raphanus sativus cv GSK3-1
FY436038       --> ..................................................  Raphanus sativus cv GSK3-1
HS106937       --> ..................................................  Raphanus sativus var. niger
FY434197       --> GGATCTACTACTCTGATGATAAGCTTCTCCAGTGTAGGATCTTTGCTTAT  Raphanus sativus cv GSK3-1
EY897089       --> GGATCTACTACTCTGATGATAAGCTTCTCCAGTGTAGGATCTTTGCTTAT  Raphanus raphanistrum subsp. maritimus
HS106980       --> GGATCTACTACTCTGATGATAAGCTTCTCCAGTGTAGGATCTTTGCTTAT  Raphanus sativus var. niger
FY434935       --> GGATCTACTACTCTGATGATAAGCTTCTCCAGTGTAGGATCTTTGCTTAT  Raphanus sativus cv GSK3-1
FD987849       --> GGATCTACTACTCTGATGATAAGCTTCTCCAGTGTAGGATCTTTGCTTAT  Raphanus raphanistrum subsp. landra
FD989084       --> GGATCTACTACTCTGATGATAAGCTTCTCCAGTGTAGGATCTTTGCTTAT  Raphanus raphanistrum subsp. landra
EY913898       --> GGATCTACTACTCAGATGATAAGCTTCTCCAGTGTAGGATCTTTGCTTAT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD971152       --> GGATCTACTACTCAGATGATAAGCTTCTCCAGTGTAGGATCTTTGCTTAT  Raphanus raphanistrum subsp. raphanistrum (MS)
FY445059       --> .......CTACTCTGATGATAAGCTTCTCCAGTGTAGGATCTTTGCTTAT  Raphanus sativus cv GSK3-1
EX746124       --> ..........................................gTGCTTAT  Raphanus raphanistrum subsp. maritimus
EW714066       --> ..................................................  Raphanus sativus var. oleiformis
EW714067       --> ..................................................  Raphanus sativus var. oleiformis

               1101   -   1151
UN21581        --> GGTGACACTCAGAGACATCGTCTTGGGCCTAATTATCTGCAGCTACCGGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY438891       <-- GGTGACACTCAGAGGCATCGTCTTGGGCCTAATTATCTGCAGCTACCGGT  Raphanus sativus cv GSK3-1
FY434250       <-- GGTGACACTCAGAGGCATCGTCTTGGGCCTAATTATCTGCAGCTACCGGT  Raphanus sativus cv GSK3-1
EV541613       <-- GGTGACACTCAGAGACATCGTCTTGGACCTAATTATTTGCAGCTACCGGT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY893497       <-- GGTGACACTCAGAGACATCGTCTTGGGCCTAATTATCTGCAGCTACCGGT  Raphanus raphanistrum subsp. maritimus
FD967360       <-- GGTGACACTCAGAGACATCGTCTTGGACCTAACTATTTGCAGTTACCGGT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX750604       <-- GGTGACACTCAGAGACATCGTCTTGGGCCTAATTATCTGCAGCTACCGGT  Raphanus raphanistrum subsp. maritimus
FD984907       <-- ........................................AGCTACCGGT  Raphanus raphanistrum subsp. landra
EW718561       <-- ..................................................  Raphanus sativus var. oleiformis
EW718824       <-- ..................................................  Raphanus sativus var. oleiformis
FY437566       <-- ..................................................  Raphanus sativus cv GSK3-1
EV537371       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FY446962       --> ..................................................  Raphanus sativus cv GSK3-1
FY440158       --> ..................................................  Raphanus sativus cv GSK3-1
FY433432       --> ..................................................  Raphanus sativus cv GSK3-1
FY433520       --> ..................................................  Raphanus sativus cv GSK3-1
FY434661       --> ..................................................  Raphanus sativus cv GSK3-1
FY451360       --> ..................................................  Raphanus sativus cv GSK3-1
FY447877       --> ..................................................  Raphanus sativus cv GSK3-1
FY447722       --> ..................................................  Raphanus sativus cv GSK3-1
FY450122       --> ..................................................  Raphanus sativus cv GSK3-1
FY453994       --> ..................................................  Raphanus sativus cv GSK3-1
FY436125       --> ..................................................  Raphanus sativus cv GSK3-1
FY439754       --> ..................................................  Raphanus sativus cv GSK3-1
FY433441       --> ..................................................  Raphanus sativus cv GSK3-1
FY438518       --> ..................................................  Raphanus sativus cv GSK3-1
FY436038       --> ..................................................  Raphanus sativus cv GSK3-1
HS106937       --> ..................................................  Raphanus sativus var. niger
FY434197       --> GGTGACACTCAGAGGCATCGTCTTGGGCCTAATTATCTGCAGCTACCGGT  Raphanus sativus cv GSK3-1
EY897089       --> GGTGACACTCAGAGACATCGTCTTGGGCCTAATTATCTGCAGCTACCGGT  Raphanus raphanistrum subsp. maritimus
HS106980       --> GGTGACACTCAGAGGCATCGTCTTGGGCCTAATTATCTGCAGCTACCGGT  Raphanus sativus var. niger
FY434935       --> GGTGACACTCAGAGGCATCGTCTTGGGCCTAATTATCTGCAGCTACCGGT  Raphanus sativus cv GSK3-1
FD987849       --> GGTGACACTCAGAGACATCGTCTTGGGCCTAATTATCTGCAGCTACCGGT  Raphanus raphanistrum subsp. landra
FD989084       --> GGTGACACTCAGAGACATCGTCTTGGGCCTAATTATCTGCAGCTACCGGT  Raphanus raphanistrum subsp. landra
EY913898       --> GGTGACACTCAGAGACATCGTCTTGGACCTAATTATTTGCAGCTACCGGT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD971152       --> GGTGACACTCAGAGACATCGTCTTGGACCTAACTATTTGCAGTTACCGGT  Raphanus raphanistrum subsp. raphanistrum (MS)
FY445059       --> GGTGACACTCAGAGGCATCGTCTTGGGCCTAATTATCTGTAGCTACCGGT  Raphanus sativus cv GSK3-1
EX746124       --> GGTGACACTCAGAGACATCGTCTTGGGCCTAATTATCTGCAGCTACCGGT  Raphanus raphanistrum subsp. maritimus
EW714066       --> ..................................................  Raphanus sativus var. oleiformis
EW714067       --> ..................................................  Raphanus sativus var. oleiformis

               1151   -   1201
UN21581        --> TAATGCTCCAAAATGTGCTCACCACAACAATCACCATGAAGGTTTTATGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY438891       <-- TAATGCTCCAAAATGTGCTCACCACAACAATCACCATGAAGGTTTTATGA  Raphanus sativus cv GSK3-1
FY434250       <-- TAATGCTCCAAAATGTGCTCACCACAACAATCACCATGAAGGTTTTATGA  Raphanus sativus cv GSK3-1
EV541613       <-- TAATGCTCCTAAATGTGCTCACCACAACAATCACCATGAAGGTTTTATGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY893497       <-- TAATGCTCCAAAATGTGCTCACCACAACAATCACCACGAAGGTTTTATGA  Raphanus raphanistrum subsp. maritimus
FD967360       <-- TAATGCTCCTAAATGTGCTCACCACAACAATCACCATGAAGGTTTTATGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX750604       <-- TAATGCTCCAAAATGTGCTCACCACAACAATCACCACGAAGGTTTTATGA  Raphanus raphanistrum subsp. maritimus
FD984907       <-- TAATGCTCCAAAATGTGCTCACCACAACAATCACCACGAAGGTTTTATGA  Raphanus raphanistrum subsp. landra
EW718561       <-- .....................gCACAACAATCACCATGAAGGTTTTATGA  Raphanus sativus var. oleiformis
EW718824       <-- .....................gCACAACAATCACCATGAAGGTTTTATGA  Raphanus sativus var. oleiformis
FY437566       <-- ..................................................  Raphanus sativus cv GSK3-1
EV537371       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FY446962       --> ..................................................  Raphanus sativus cv GSK3-1
FY440158       --> ..................................................  Raphanus sativus cv GSK3-1
FY433432       --> ..................................................  Raphanus sativus cv GSK3-1
FY433520       --> ..................................................  Raphanus sativus cv GSK3-1
FY434661       --> ..................................................  Raphanus sativus cv GSK3-1
FY451360       --> ..................................................  Raphanus sativus cv GSK3-1
FY447877       --> ..................................................  Raphanus sativus cv GSK3-1
FY447722       --> ..................................................  Raphanus sativus cv GSK3-1
FY450122       --> ..................................................  Raphanus sativus cv GSK3-1
FY453994       --> ..................................................  Raphanus sativus cv GSK3-1
FY436125       --> ..................................................  Raphanus sativus cv GSK3-1
FY439754       --> ..................................................  Raphanus sativus cv GSK3-1
FY433441       --> ..................................................  Raphanus sativus cv GSK3-1
FY438518       --> ..................................................  Raphanus sativus cv GSK3-1
FY436038       --> ..................................................  Raphanus sativus cv GSK3-1
HS106937       --> ..................................................  Raphanus sativus var. niger
FY434197       --> TAATGCTCCAAAATGTGCTCACCACAACAATCACCATGAAGGTTTTATGA  Raphanus sativus cv GSK3-1
EY897089       --> TAATGCTCCAAAATGTGCTCACCACAACAATCACCACGAAG-TTTTATGA  Raphanus raphanistrum subsp. maritimus
HS106980       --> TAATGCTCCAAAATGTGCTCACCACAACAATCACCATGAAGGTTTTATGA  Raphanus sativus var. niger
FY434935       --> TAATGCTCCAAAATGTGCTCACCACAACAATCACCATGAAGGTTTTATGA  Raphanus sativus cv GSK3-1
FD987849       --> TAATGCTCCAAAATGTGCTCACCACAACAATCACCACGAAGGTTTTATGA  Raphanus raphanistrum subsp. landra
FD989084       --> TAATGCTCCAAAATGTGCTCACCACAACAATCACCACGAAGGTTTTATGA  Raphanus raphanistrum subsp. landra
EY913898       --> TAATGCTCCTAAATGTGCTCACCACAACAATCACCATGAAGGTTTTATGA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD971152       --> TAATGCTCCTAAATGTGCTCACCACAACAATCACCATGAAGGTTTTATGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FY445059       --> TAATGCTCCAAAATGTGCTCACCACAACAATCACCATGAAGGTTTTATGA  Raphanus sativus cv GSK3-1
EX746124       --> TAATGCTCCAAAATGTGCTCACCACAACAATCACCACGAAGGTTTTATGA  Raphanus raphanistrum subsp. maritimus
EW714066       --> ..................ggggCACAACAATCACCATGAAGGTTTTATGA  Raphanus sativus var. oleiformis
EW714067       --> ..................ggggCACAACAATCACCATGAAGGTTTTATGA  Raphanus sativus var. oleiformis

               1201   -   1251
UN21581        --> ACTTCATGCATAGAGATGAGGAGATCAACTACTACCCCTCAAAGTTTGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY438891       <-- ACTTCATGCATAGAGATGAGGAGATCAACTACTACCCCTCAAAGTTTGAT
FY434250       <-- ACTTCATGCATAGAGATGAGGAGATCAACTACTACCCCTCAAAGTTTGAT
EV541613       <-- ACTTCATGCATAGAGACGAGGAGATCAACTACTACCCCTCAAAGTTTGAT
EY893497       <-- ACTTCATGCATAGAGATGAGGAGATCAACTACTACCCCTCAAAGTTTGAT
FD967360       <-- ACTTCATGCATAGAGACGAGGAGATCAACTACTACCCCTCAAAGTTTGAT
EX750604       <-- ACTTCATGCATAGAGATGAGGAGATCAACTACTACCCCTCAAAGTTTGAT
FD984907       <-- ACTTCATGCATAGAGATGAGGAGATCAACTACTACCCCTCAAAGTTTGAT
EW718561       <-- ACTTCATGCATAGAGATGAGGAGATCAACTACTACCCCTCAAAGTTTGAT
EW718824       <-- ACTTCATGCATAGAGATGAGGAGATCAACTACTACCCCTCAAAGTTTGAT
FY437566       <-- ..................................................
EV537371       --> ..................................................
FY446962       --> ..................................................
FY440158       --> ..................................................
FY433432       --> ..................................................
FY433520       --> ..................................................
FY434661       --> ..................................................
FY451360       --> ..................................................
FY447877       --> ..................................................
FY447722       --> ..................................................
FY450122       --> ..................................................
FY453994       --> ..................................................
FY436125       --> ..................................................
FY439754       --> ..................................................
FY433441       --> ..................................................
FY438518       --> ..................................................
FY436038       --> ..................................................
HS106937       --> ..................................................
FY434197       --> ACTTCATG..........................................
EY897089       --> -CTTCATGCATAGAGATGAG-AGATCAACTACTACCCCTCAA-GTTTGAT
HS106980       --> ACTTCATGCATAGAGATGAGGAGATCAACTACTACCCCTCAAAGTTTGAT
FY434935       --> ACTTCATGCATAGAGATGAGGAGATCAACTACTACCCCTCAAAGTTTGAT
FD987849       --> ACTTCATGCATAGAGATGAGGAGATCAACTACTACCCCTCAAAGTTTGAT
FD989084       --> ACTTCATGCATAGAGATGAGGAGATCAACTACTACCCCTCAAAGTTTGAT
EY913898       --> ACTTCATGCATAGAGACGAGGAGATCAACTACTACCCCTCAAAGTTTGAT
FD971152       --> ACTTCATGCATAGAGACGAGGAGATCAACTACTACCCCTCAAAGTTTGAT
FY445059       --> ACTTCATGCATAGAGATGAGGAGATCAACTACTACCCCTCAAAGTTTGAT
EX746124       --> ACTTCATGCATAGAGATGAGGAGATCAACTACTACCCCTCAAAGTTTGAT
EW714066       --> ACTTCATGCATAGAGATGAGGAGATCAACTACTACCCCTCAAAGTTTGAT
EW714067       --> ACTTCATGCATAGAGATGAGGAGATCAACTACTACCCCTCAAAGTTTGAT

               1251   -   1301
UN21581        --> CCTGTCCGCTGTGCTGAGAAAGTTCCTATCCCTACCAAGTCTTACACTGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY438891       <-- CCTGTCCGCTGTGCTGAGAAAGTTCCTATCCCTACCAAGTCTTACACTGG  Raphanus sativus cv GSK3-1
FY434250       <-- CCTGTCCGCTGTGCTGAGAAAGTTCCTATCCCTACCAAGTCTTACACTGG  Raphanus sativus cv GSK3-1
EV541613       <-- CCTGTCCGCTGTGCTGAGAAAGTTCCTATCCCTACCAAGTCTTACACTGG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY893497       <-- CCTGTCCGTTGTGCTGAGAAAGTTCCTATCCCTAACAAGTCTTACACTGG  Raphanus raphanistrum subsp. maritimus
FD967360       <-- CCTGTCCGCTGTGCTGAGAAAGTTCCTATCCCTACCAAGTCTTACACTGG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX750604       <-- CCTGTCCGTTGTGCTGAGAAAGTTCCTATCCCTAACAAGTCTTACACTGG  Raphanus raphanistrum subsp. maritimus
FD984907       <-- CCTGTCCGTTGTGCTGAGAAAGTTCCTATCCCTAACAAGTCTTACACTGG  Raphanus raphanistrum subsp. landra
EW718561       <-- CCTGTCCGCTGTGCTGAGAAAGTTCCTATCCCTACCAAGTCTTACACTGG  Raphanus sativus var. oleiformis
EW718824       <-- CCTGTCCGCTGTGCTGAGAAAGTTCCTATCCCTACCAAGTCTTACACTGG  Raphanus sativus var. oleiformis
FY437566       <-- ................................................GG  Raphanus sativus cv GSK3-1
EV537371       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FY446962       --> ..................................................  Raphanus sativus cv GSK3-1
FY440158       --> ..................................................  Raphanus sativus cv GSK3-1
FY433432       --> ..................................................  Raphanus sativus cv GSK3-1
FY433520       --> ..................................................  Raphanus sativus cv GSK3-1
FY434661       --> ..................................................  Raphanus sativus cv GSK3-1
FY451360       --> ..................................................  Raphanus sativus cv GSK3-1
FY447877       --> ..................................................  Raphanus sativus cv GSK3-1
FY447722       --> ..................................................  Raphanus sativus cv GSK3-1
FY450122       --> ..................................................  Raphanus sativus cv GSK3-1
FY453994       --> ..................................................  Raphanus sativus cv GSK3-1
FY436125       --> ..................................................  Raphanus sativus cv GSK3-1
FY439754       --> ..................................................  Raphanus sativus cv GSK3-1
FY433441       --> ..................................................  Raphanus sativus cv GSK3-1
FY438518       --> ..................................................  Raphanus sativus cv GSK3-1
FY436038       --> ..................................................  Raphanus sativus cv GSK3-1
HS106937       --> ..................................................  Raphanus sativus var. niger
FY434197       --> ..................................................  Raphanus sativus cv GSK3-1
EY897089       --> CC................................................  Raphanus raphanistrum subsp. maritimus
HS106980       --> CCTGTCCGCTGTGCTGAGAAAGTTCCTATCCCTACCAAGTCTTACACTGG  Raphanus sativus var. niger
FY434935       --> CCTGTCCGCTGTGCTGAGAAAGTTCCTATCCCTACCAAGTCTTACACTGG  Raphanus sativus cv GSK3-1
FD987849       --> CCTGTCCGTTGTGCTGAGAAAGTTCCTATCCCTAACAAGTCTTACACTGG  Raphanus raphanistrum subsp. landra
FD989084       --> CCTGTCCGTTGTGCTGAGAAAGTTCCTATCCCTAACAAGTCTTACACTGG  Raphanus raphanistrum subsp. landra
EY913898       --> CCTGTCCGCTGTGCTGAGAAAGTTCCTATCCCTACCAAGTCTTACACTGG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD971152       --> CCTGTCCGCTGTGCTGAGAAAGTTCCTATCCCTACCAAGTCTTACACTGG  Raphanus raphanistrum subsp. raphanistrum (MS)
FY445059       --> CCTGTCCGCTGTGCTGAGAAAGTTCCTATCCCTACCAAGTCTTACACTGG  Raphanus sativus cv GSK3-1
EX746124       --> CCTGTCCGTTGTGCTGAGAAAGTTCCTATCCCTAACAAGTCTTACACTGG  Raphanus raphanistrum subsp. maritimus
EW714066       --> CCTGTCCGCTGTGCTGAGAAAGTTCCTATCCCTACCAAGTCTTACACTGG  Raphanus sativus var. oleiformis
EW714067       --> CCTGTCCGCTGTGCTGAGAAAGTTCCTATCCCTACCAAGTCTTACACTGG  Raphanus sativus var. oleiformis

               1301   -   1351
UN21581        --> AATCCGAACAAAGTGCATCATCAAGAAGGAGAACAACTTCAAGCAACCTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY438891       <-- AATCCGAACAAAGTGCATCATCAAGAAGGAGAACAACTTCAAGCAACCTG
FY434250       <-- AATCCGAACAAAGTGCATCATCAAGAAGGAGAACAACTTCAAGCAACCTG
EV541613       <-- AATCCGAACAAAGTGCATCATCAAGAAGGAGAACAACTTCAAGCAACCTG
EY893497       <-- AATCCGAACAAAGTGCATCATCAAGAAGGAGAACAACTTCAAGCAACCTG
FD967360       <-- AATCCGAACAAAGTGCATCATCAAGAAGGAGAACAACTTCAAGCAACCTG
EX750604       <-- AATCCGAACAAAGTGCATCATCAAGAAGGAGAACAACTTCAAGCAACCTG
FD984907       <-- AATCCGAACAAAGTGCATCATCAAGAAGGAGAACAACTTCAAGCAACCTG
EW718561       <-- AATCCGAACAAAGTGCATCATCAAGAAGGAGAACAACTTCAAGCAACCTG
EW718824       <-- AATCCGAACAAAGTGCATCATCAAGAAGGAGAACAACTTCAAGCAACCTG
FY437566       <-- AATCCGAACAAAGTGCATCATCAAGAAGGAGAACAACTTCAAGCAACCTG
EV537371       --> ..................................................
FY446962       --> ..................................................
FY440158       --> ..................................................
FY433432       --> ..................................................
FY433520       --> ..................................................
FY434661       --> ..................................................
FY451360       --> ..................................................
FY447877       --> ..................................................
FY447722       --> ..................................................
FY450122       --> ..................................................
FY453994       --> ..................................................
FY436125       --> ..................................................
FY439754       --> ..................................................
FY433441       --> ..................................................
FY438518       --> ..................................................
FY436038       --> ..................................................
HS106937       --> ..................................................
FY434197       --> ..................................................
EY897089       --> ..................................................
HS106980       --> ..................................................
FY434935       --> AATCCGAACAAAGTGCATCATCAAGAAGGAGAACAACTTCAAGCAACCTG
FD987849       --> AATCCGAACAAAGTGCATCATCAAGAAGGAGAACAACTT...........
FD989084       --> AATCCGAACAAAGTGCATCATCAAGAAGGAGAACAACTTCAAGCAACCTG
EY913898       --> AATCCGAACAAAGTGCATCATCAAGAAGGAGAACAACTTCAAGCAACCTG
FD971152       --> AATCCGAACAAAGTGCATCATCAAGAAGGAGAACAACTTCAAGCAACCTG
FY445059       --> AATCCGAACAAAGTGCATCATCAAGAAGGAGAACAACTTCAAGCAACCTG
EX746124       --> AATCCGAACAAAGTGCATCATCAAGAAGGAGAACAACTTCAAGCAACCTG
EW714066       --> AATCCGAACAAAGTGCATCATCAAGAAGGAGAACAACTTCAAGCAACCTG
EW714067       --> AATCCGAACAAAGTGCATCATCAAGAAGGAGAACAACTTCAAGCAACCTG

               1351   -   1401
UN21581        --> GAGATAGATACAGATCATGGGCACCAGACAGGCAAGACCGGTTTGTTAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY438891       <-- GAGATAGATACAGATCATGGGCACCAGACAGGCAAGACCGGTTTGTTAAG  Raphanus sativus cv GSK3-1
FY434250       <-- GAGATAGATACAGATCATGGGCACCAGACAGGCAAGACCGGTTTGTTAAG  Raphanus sativus cv GSK3-1
EV541613       <-- GAGATAGATACAGATCATGGGCACCAGACAGGCAAGACCGGTTTGTTAAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY893497       <-- GAGATAGATACAGATCGTGGGCACCAGACAGGCAAGACCGGTTTGTTAAG  Raphanus raphanistrum subsp. maritimus
FD967360       <-- GAGATAGATACAGATCATGGGCACCAGACAGGCAAGACCGGTTCGTTAAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX750604       <-- GAGATAGATACAGATCGTGGGCACCAGACAGGCAAGACCGGTTTGTTAAG  Raphanus raphanistrum subsp. maritimus
FD984907       <-- GAGATAGATACAGATCGTGGGCACCAGACAGGTAAGACCGGTTTGTTAAG  Raphanus raphanistrum subsp. landra
EW718561       <-- GAGATAGATACAGATCATGGGCACCAGACAGGCAAGACCGGTTTGTTAAG  Raphanus sativus var. oleiformis
EW718824       <-- GAGATAGATACAGATCATGGGCACCAGACAGGCAAGACCGGTTTGTTAAG  Raphanus sativus var. oleiformis
FY437566       <-- GAGATAGATACAGATCATGGGCACCAGACAGGCAAGACCGGTTTGTTAAG  Raphanus sativus cv GSK3-1
EV537371       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FY446962       --> ..................................................  Raphanus sativus cv GSK3-1
FY440158       --> ..................................................  Raphanus sativus cv GSK3-1
FY433432       --> ..................................................  Raphanus sativus cv GSK3-1
FY433520       --> ..................................................  Raphanus sativus cv GSK3-1
FY434661       --> ..................................................  Raphanus sativus cv GSK3-1
FY451360       --> ..................................................  Raphanus sativus cv GSK3-1
FY447877       --> ..................................................  Raphanus sativus cv GSK3-1
FY447722       --> ..................................................  Raphanus sativus cv GSK3-1
FY450122       --> ..................................................  Raphanus sativus cv GSK3-1
FY453994       --> ..................................................  Raphanus sativus cv GSK3-1
FY436125       --> ..................................................  Raphanus sativus cv GSK3-1
FY439754       --> ..................................................  Raphanus sativus cv GSK3-1
FY433441       --> ..................................................  Raphanus sativus cv GSK3-1
FY438518       --> ..................................................  Raphanus sativus cv GSK3-1
FY436038       --> ..................................................  Raphanus sativus cv GSK3-1
HS106937       --> ..................................................  Raphanus sativus var. niger
FY434197       --> ..................................................  Raphanus sativus cv GSK3-1
EY897089       --> ..................................................  Raphanus raphanistrum subsp. maritimus
HS106980       --> ..................................................  Raphanus sativus var. niger
FY434935       --> GAGATAGATACAGATCATGGGCACCAGACAGGCAAGACCGGTTTGTTAAG  Raphanus sativus cv GSK3-1
FD987849       --> ..................................................  Raphanus raphanistrum subsp. landra
FD989084       --> GAGATAGATACAGATCGTGGGCACCAGACAGGTAAGACCGGTTTGTTAAG  Raphanus raphanistrum subsp. landra
EY913898       --> GAGATAGATACAGATCATGGGCACCAGACAGGCAAGACCGGTTTGTTAAG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD971152       --> GAGATAGATACAGATCATGGGCACCAGACAGGCAAGACCGGTTCGTTAAG  Raphanus raphanistrum subsp. raphanistrum (MS)
FY445059       --> GAGATAGATACAGATCATGGGCACCAGACAGGCAAGACCGGTTTGTTAAG  Raphanus sativus cv GSK3-1
EX746124       --> GAGATAGATACAGATCGTGGGCACCAGACAGGCAAGACCGGTTTGTTAAG  Raphanus raphanistrum subsp. maritimus
EW714066       --> GAGATAGATACAGATCATGGGCACCAGACAGGCAAGACCGGTTTGTTAAG  Raphanus sativus var. oleiformis
EW714067       --> GAGATAGATACAGATCATGGGCACCAGACAGGCAAGACCGGTTTGTTAAG  Raphanus sativus var. oleiformis

               1401   -   1451
UN21581        --> AGATGGG-TAGAGATTCTGTCAGAGCCACGTCTCACGCATGAGATCCGTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY438891       <-- AGATGGG-TAGAGATTCTGTCAGAGCCACGTCTCACGCATGAGATCCGTA  Raphanus sativus cv GSK3-1
FY434250       <-- AGATGGG-TAGAGATTCTGTCAGAGCCACGTCTCACGCATGAGATCCGTA  Raphanus sativus cv GSK3-1
EV541613       <-- AGATGGG-TAGAGATCCTGTCAGAACCGCGTCTCACGCATGAGATCCGTA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY893497       <-- AGATGGG-TGGAGATTCTGTCAGAGCCACGTCTCACGCATGAGATCCGTA  Raphanus raphanistrum subsp. maritimus
FD967360       <-- AGATGGG-TAGAGATTCTGTCAGAGCCACGTCTCACGCATGAGATCCGTA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX750604       <-- AGATGGG-TGGAGATTCTGTCAGAGCCACGTCTCACGCATGAGATCCTTA  Raphanus raphanistrum subsp. maritimus
FD984907       <-- AGATGGG-TGGAGATTCTGTCAGAGCCACGTCTCACGCATGAGATCCGTA  Raphanus raphanistrum subsp. landra
EW718561       <-- AGATGGG-TAGAGATTCTGTCAGAGCCACGTCTCACGCATGAGATCCGTA  Raphanus sativus var. oleiformis
EW718824       <-- AGATGGG-TAGAGATTCTGTCAGAGCCACGTCTCACGCATGAGATCCGTA  Raphanus sativus var. oleiformis
FY437566       <-- AGATGGG-TAGAGATTCTGTCAGAGCCACGTCTCACGCATGAGATCCGTA  Raphanus sativus cv GSK3-1
EV537371       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FY446962       --> ..................................................  Raphanus sativus cv GSK3-1
FY440158       --> ..................................................  Raphanus sativus cv GSK3-1
FY433432       --> ..................................................  Raphanus sativus cv GSK3-1
FY433520       --> ..................................................  Raphanus sativus cv GSK3-1
FY434661       --> ..................................................  Raphanus sativus cv GSK3-1
FY451360       --> ..................................................  Raphanus sativus cv GSK3-1
FY447877       --> ..................................................  Raphanus sativus cv GSK3-1
FY447722       --> ..................................................  Raphanus sativus cv GSK3-1
FY450122       --> ..................................................  Raphanus sativus cv GSK3-1
FY453994       --> ..................................................  Raphanus sativus cv GSK3-1
FY436125       --> ..................................................  Raphanus sativus cv GSK3-1
FY439754       --> ..................................................  Raphanus sativus cv GSK3-1
FY433441       --> ..................................................  Raphanus sativus cv GSK3-1
FY438518       --> ..................................................  Raphanus sativus cv GSK3-1
FY436038       --> ..................................................  Raphanus sativus cv GSK3-1
HS106937       --> ..................................................  Raphanus sativus var. niger
FY434197       --> ..................................................  Raphanus sativus cv GSK3-1
EY897089       --> ..................................................  Raphanus raphanistrum subsp. maritimus
HS106980       --> ..................................................  Raphanus sativus var. niger
FY434935       --> AGATGGG-TAGAGATTCTGTCAGAGCCACGTCTCACGCATGAGATCCGTA  Raphanus sativus cv GSK3-1
FD987849       --> ..................................................  Raphanus raphanistrum subsp. landra
FD989084       --> AGATGGG-TGGAGATTCTGTCAGAGCCACGTCTCACGCATGAGATCCGTA  Raphanus raphanistrum subsp. landra
EY913898       --> GGATGGGGTAGAGATCCTGTCAGAGCCACGTCTCACGCGTGAGATCCGTA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD971152       --> AGATGGG-TAGAGATTCTGTCAGAGCCACGTCTCACGCATGAGATCCGTA  Raphanus raphanistrum subsp. raphanistrum (MS)
FY445059       --> AGATGGG-TAGAGATTCTGTCAGAGCCACGTCTCACGCATGAGATCCGTA  Raphanus sativus cv GSK3-1
EX746124       --> AGATGGG-TGGAGATTCTGTCAGAGCCACGTCTCACGCATGAGATCCTTA  Raphanus raphanistrum subsp. maritimus
EW714066       --> AGATGGG-TAGAGATTCTGTCAGAGCCACGTCTCACGCATGAGATCCGTA  Raphanus sativus var. oleiformis
EW714067       --> AGATGGG-TAGAGATTCTGTCAGAGCCACGTCTCACGCATGAGATCCGTA  Raphanus sativus var. oleiformis

               1451   -   1501
UN21581        --> GCATCTGGATCTCTTACTGGTCTCAGGCTGATCGATCTTTGGGACAGAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY438891       <-- GCATCTGGATCTCTTACTGGTCTCAGGCTGATCGATCTTTGGGACAGAAG
FY434250       <-- GCATCTGGATCTCTTACTGGTCTCAGGCTGATCGATCTTTGGGACAGAAG
EV541613       <-- GCATATGGATCTCTTACTGGTCTCAGGCTGATCGATCTTTGGGACAGAAG
EY893497       <-- GCATCTGGATCTCTTACTGGTCTCAGGCTGATCGATCTTTGGGACAGAAG
FD967360       <-- GCATCTGGATCTCTTACTGGTCTCAGGCTGATCGATCTTTGGGACAGAAG
EX750604       <-- GCATCTGGATCTCTTACTGGTCTCAGGCTGATCGATCTTTGGGACAGAAG
FD984907       <-- GCATCTGGATCTCTTACTGGTCTCAGGCTGATCGATCTTTGGGACAGAAG
EW718561       <-- GCATCTGGATCTCTTACTGGTCTCAGGCTGATCGATCTTTGGGACAGAAG
EW718824       <-- GCATCTGGATCTCTTACTGGTCTCAGGCTGATCGATCTTTGGGACAGAAG
FY437566       <-- GCATCTGGATCTCTTACTGGTCTCAGGCTGATCGATCTTTGGGACAGAAG
EV537371       --> ..................................................
FY446962       --> ..................................................
FY440158       --> ..................................................
FY433432       --> ..................................................
FY433520       --> ..................................................
FY434661       --> ..................................................
FY451360       --> ..................................................
FY447877       --> ..................................................
FY447722       --> ..................................................
FY450122       --> ..................................................
FY453994       --> ..................................................
FY436125       --> ..................................................
FY439754       --> ..................................................
FY433441       --> ..................................................
FY438518       --> ..................................................
FY436038       --> ..................................................
HS106937       --> ..................................................
FY434197       --> ..................................................
EY897089       --> ..................................................
HS106980       --> ..................................................
FY434935       --> GCATCTGGATCTCTTACTGGTC............................
FD987849       --> ..................................................
FD989084       --> GCATCTGGATCTCTTACTGGTCTCAG-CTGATCGATCTTTGGGACAGAAG
EY913898       --> GCATATGGATCTCTTACTGGTCTCACGCTGATCGATCTTTGGGACAGAAG
FD971152       --> GCATCTGGATCTCTTACTGGTCTCAGGCTGATCGATCTTTGGGACAGAAG
FY445059       --> GCATCTGGATCTCTTACTGGTCTCAGGCTGATCGATCTTTGGGACAGAAG
EX746124       --> GCATCTGGATCTCTTACTGGTCTCAGGCTGATCGATCTTTGGGACAGAAG
EW714066       --> GCATCTGGATCTCTTACTGGTCTCAGGCTGATCGATCTTTGGGACAGAAG
EW714067       --> GCATCTGGATCTCTTACTGGTCTCAGGCTGATCGATCTTTGGGACAGAAG

               1501   -   1551
UN21581        --> CTTGCAAGCCGTCTCAACGTTAGGCCAAGCATGTAATCTTCATATTTGCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY438891       <-- CTTGCAAGCCGTCTCAACGTTAGGCCAAGCATGTAATCTTCATATTTGCT
FY434250       <-- CTTGCAAGCCGTCTCAACGTTAGGCCAAGCATGTAATCTTCATATTTGCT
EV541613       <-- CTTGCAAGCCGTCTCAATGTTAGGCCAAGCATGTAATCTTCATATTTGCT
EY893497       <-- CTTGCAAGCCGTCTCAACGTTAGGCCAAGCATGTAATCTTCATATTTGCT
FD967360       <-- CTTGCAAGCCGTCTCAACGTTAGGCCAAGCATGTAATCTTCGTATTTGCT
EX750604       <-- CTTGCAAGCCGTCTCAACGTTAGGCCAAGCATGTAATCTTCATATTTGCT
FD984907       <-- CTTGCAAGCCGTTTCAACGTTAGGCCAAGCATATAATCTTCATATTTGCT
EW718561       <-- CTTGCAAGCCGTCTCAACGTTAGGCCAAGCATGTAATCTTCATATTTGCT
EW718824       <-- CTTGCAAGCCGTCTCAACGTTAGGCCAAGCATGTAATCTTCATATTTGCT
FY437566       <-- CTTGCAAGCCGTCTCAACGTTAGGCCAAGCATGTAATCTTCATATTTGCT
EV537371       --> ..................................................
FY446962       --> ..................................................
FY440158       --> ..................................................
FY433432       --> ..................................................
FY433520       --> ..................................................
FY434661       --> ..................................................
FY451360       --> ..................................................
FY447877       --> ..................................................
FY447722       --> ..................................................
FY450122       --> ..................................................
FY453994       --> ..................................................
FY436125       --> ..................................................
FY439754       --> ..................................................
FY433441       --> ..................................................
FY438518       --> ..................................................
FY436038       --> ..................................................
HS106937       --> ..................................................
FY434197       --> ..................................................
EY897089       --> ..................................................
HS106980       --> ..................................................
FY434935       --> ..................................................
FD987849       --> ..................................................
FD989084       --> CTTGCAAGCCGTTTCAcg................................
EY913898       --> CTTGCA-GCCGTCTCA-CGTT-GGCCAAGCATGTAATCTTCATATT....
FD971152       --> CTTGCAAGCCGTCTCAACGTTAGGCCAAGCATGTAATCTTCGTATTTGCT
FY445059       --> CTTGCAAGCCGTCTCAACGTTAGGCCAAGCATGTAATCTTCATATTTGCT
EX746124       --> CTTGCAAGCCGTCTCAACGTTAGGCCAAGCATGTAATCTTCATATTTGCT
EW714066       --> CTTGCAAGCCGTCTCAACGTTAGGCCAAGCATGTAATCTTCATATTTGCT
EW714067       --> CTTGCAAGCCGTCTCAACGTTAGGCCAAGCATGTAATCTTCATATTTGCT

               1551   -   1601
UN21581        --> TATTGCCCGGAAAGTACAATCGTGATC-TCT-TATCATCTGTTGGTCGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY438891       <-- TATTGCCCGGAAAGTACAATCGTGATC-TCT-TATCATCTGTTGGTCGTT  Raphanus sativus cv GSK3-1
FY434250       <-- TATTGCCCGGAAAGTACAATCGTGATC-TCT-TATCATCTGTTGGTCGTT  Raphanus sativus cv GSK3-1
EV541613       <-- TATTGCCCGGAAAGTACAATCGTGATC-GATCTATCATCTGTTGGTCGTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY893497       <-- TATTGCCCGGAAAGTACAATCGTGATC-GATCTATCATCTGTTGGTCGTT  Raphanus raphanistrum subsp. maritimus
FD967360       <-- TATTGCCCGGAAAGTACAATCGTGATCAAATCTATCATCTGTTGGTCGTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX750604       <-- TATTGCCCGGAAAGTACAATCGTGATC-GATCTATCATCTGTTGGTCGTT  Raphanus raphanistrum subsp. maritimus
FD984907       <-- TATTGCCCGGAAAGTACAATCGTGATC-GATCTATCATCTGTTGGTCGTT  Raphanus raphanistrum subsp. landra
EW718561       <-- TATTGCCCGGAAAGTACAATCGTGATC-TCT-TATCATCTGTTGGTCGTT  Raphanus sativus var. oleiformis
EW718824       <-- TATTGCCCGGAAAGTACAATCGTGATC-TCT-TATCATCTGTTGGTCGTT  Raphanus sativus var. oleiformis
FY437566       <-- TATTGCCCGGAAAGTACAATCGTGATC-TCT-TATCATCTGTTGGTCGTT  Raphanus sativus cv GSK3-1
EV537371       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FY446962       --> ..................................................  Raphanus sativus cv GSK3-1
FY440158       --> ..................................................  Raphanus sativus cv GSK3-1
FY433432       --> ..................................................  Raphanus sativus cv GSK3-1
FY433520       --> ..................................................  Raphanus sativus cv GSK3-1
FY434661       --> ..................................................  Raphanus sativus cv GSK3-1
FY451360       --> ..................................................  Raphanus sativus cv GSK3-1
FY447877       --> ..................................................  Raphanus sativus cv GSK3-1
FY447722       --> ..................................................  Raphanus sativus cv GSK3-1
FY450122       --> ..................................................  Raphanus sativus cv GSK3-1
FY453994       --> ..................................................  Raphanus sativus cv GSK3-1
FY436125       --> ..................................................  Raphanus sativus cv GSK3-1
FY439754       --> ..................................................  Raphanus sativus cv GSK3-1
FY433441       --> ..................................................  Raphanus sativus cv GSK3-1
FY438518       --> ..................................................  Raphanus sativus cv GSK3-1
FY436038       --> ..................................................  Raphanus sativus cv GSK3-1
HS106937       --> ..................................................  Raphanus sativus var. niger
FY434197       --> ..................................................  Raphanus sativus cv GSK3-1
EY897089       --> ..................................................  Raphanus raphanistrum subsp. maritimus
HS106980       --> ..................................................  Raphanus sativus var. niger
FY434935       --> ..................................................  Raphanus sativus cv GSK3-1
FD987849       --> ..................................................  Raphanus raphanistrum subsp. landra
FD989084       --> ..................................................  Raphanus raphanistrum subsp. landra
EY913898       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD971152       --> TATTGCCCGGAAAGTACAATCGTGATCAAATCTATCATCTGTTGGTCGTT  Raphanus raphanistrum subsp. raphanistrum (MS)
FY445059       --> TATTGCCCGGAAAGTACAATCGTGATC-TCT-TATCATCTGTTGGTCGTT  Raphanus sativus cv GSK3-1
EX746124       --> TATTGCCCGGAAAGTACAATCGTGATC-GATCTATCATCTGTTGGTCGTT  Raphanus raphanistrum subsp. maritimus
EW714066       --> TATTGCCCGGAAAGTACAATCGTGATC-TCT-TATCATCTGTTGGTCGTT  Raphanus sativus var. oleiformis
EW714067       --> TATTGCCCGGAAAGTACAATCGTGATC-TCT-TATCATCTGTTGGTCGTT  Raphanus sativus var. oleiformis

               1601   -   1651
UN21581        --> ATATTCCTCAAAAATATGATTTTCTTGGGTTGTTTATATCGTCTATGTAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY438891       <-- ATATTCCTCAAAAATATGATTTTCTTGGGTTGTTTATATCGTCTATGTAT  Raphanus sativus cv GSK3-1
FY434250       <-- ATATTCCTCAAAAATATGATTTTCTTGGGTTGTTTATATCGTCTATGTAT  Raphanus sativus cv GSK3-1
EV541613       <-- ACATTCCTCAAAAATATGATTTTCTTGGGTTATTTATTTCGTCTATGTAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY893497       <-- ACATTCCTCAAAAATATGATTTTCTTGGGTTATTTATTTCGTCTATGTAT  Raphanus raphanistrum subsp. maritimus
FD967360       <-- ACATTCCTCAAAAATATGATTTTCTTGGGTTATTTATTTCGTCTATGTAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX750604       <-- ACATTCCTCAAAAATATGATTTTCTTGGGTTATTTATTTCGTCTATGTAT  Raphanus raphanistrum subsp. maritimus
FD984907       <-- ACATTCCTCAAAAATATGATTTTCTTGGGTTATTTATTTCGTCTATGTAT  Raphanus raphanistrum subsp. landra
EW718561       <-- ATATTCCTCAAAAATATGATTTTCTTGGGTTGTTTATATCGTCTATGTAT  Raphanus sativus var. oleiformis
EW718824       <-- ATATTCCTCAAAAATATGATTTTCTTGGGTTGTTTATATCGTCTATGTAT  Raphanus sativus var. oleiformis
FY437566       <-- ATATTCCTCAAAAATATGATTTTCTTGGGTTGTTTATATCGTCTATGTAT  Raphanus sativus cv GSK3-1
EV537371       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FY446962       --> ..................................................  Raphanus sativus cv GSK3-1
FY440158       --> ..................................................  Raphanus sativus cv GSK3-1
FY433432       --> ..................................................  Raphanus sativus cv GSK3-1
FY433520       --> ..................................................  Raphanus sativus cv GSK3-1
FY434661       --> ..................................................  Raphanus sativus cv GSK3-1
FY451360       --> ..................................................  Raphanus sativus cv GSK3-1
FY447877       --> ..................................................  Raphanus sativus cv GSK3-1
FY447722       --> ..................................................  Raphanus sativus cv GSK3-1
FY450122       --> ..................................................  Raphanus sativus cv GSK3-1
FY453994       --> ..................................................  Raphanus sativus cv GSK3-1
FY436125       --> ..................................................  Raphanus sativus cv GSK3-1
FY439754       --> ..................................................  Raphanus sativus cv GSK3-1
FY433441       --> ..................................................  Raphanus sativus cv GSK3-1
FY438518       --> ..................................................  Raphanus sativus cv GSK3-1
FY436038       --> ..................................................  Raphanus sativus cv GSK3-1
HS106937       --> ..................................................  Raphanus sativus var. niger
FY434197       --> ..................................................  Raphanus sativus cv GSK3-1
EY897089       --> ..................................................  Raphanus raphanistrum subsp. maritimus
HS106980       --> ..................................................  Raphanus sativus var. niger
FY434935       --> ..................................................  Raphanus sativus cv GSK3-1
FD987849       --> ..................................................  Raphanus raphanistrum subsp. landra
FD989084       --> ..................................................  Raphanus raphanistrum subsp. landra
EY913898       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD971152       --> ACATTCCTCAAAAATATGATTTTCTTGGGTTATTTATTTCGTCTATGTAT  Raphanus raphanistrum subsp. raphanistrum (MS)
FY445059       --> ATATTCCTCAAAAATATGATTTTCTTGGGTTGTTTATATCGTCTATGTAT  Raphanus sativus cv GSK3-1
EX746124       --> ACATTCCTCAAAAATATGATTTTCTTGGGTTATTTATTTCGTCTATGTAT  Raphanus raphanistrum subsp. maritimus
EW714066       --> ATATTCCTCAAAAATATGATTTTCTTGGGTTGTTTATATCGTCTATGTAT  Raphanus sativus var. oleiformis
EW714067       --> ATATTCCTCAAAAATATGATTTTCTTGGGTTGTTTATATCGTCTATGTAT  Raphanus sativus var. oleiformis

               1651   -   1701
UN21581        --> AATAGTGATGCATGTAATCCTCTAAAACGATGTTTCCTTCATGTTTTACT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY438891       <-- AATAGTGATGCATGTAATCCTCTAAAACGATGTTTCCTTCATGTTTTACT  Raphanus sativus cv GSK3-1
FY434250       <-- AATAGTGATGCATGTAATCCTCTAAAACGATGTTTCCTTCATGTTTTACT  Raphanus sativus cv GSK3-1
EV541613       <-- AATAGTAATGCTTGTAATCCTCTAAAACGATGTTTCCTTCATGTTTTACT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY893497       <-- AATAGTAATGCTTGTAATCCTCTAAAACGATGTTTCCTTCATGTTTTACT  Raphanus raphanistrum subsp. maritimus
FD967360       <-- AATAGTAATGCTTGTAATCCTCTAAAACGATGTTTCCTTCATGTTTTACT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX750604       <-- AATAGTAATGCTTGTAATCCTCTAAAACGATGTTTCCTTCATGT--TACT  Raphanus raphanistrum subsp. maritimus
FD984907       <-- AATAGTAATGCTTGTAATCCTCTAAAACGATGTTTCCTTCATGTTTTACT  Raphanus raphanistrum subsp. landra
EW718561       <-- AATAGTGATGCATGTAATCCTCTAAAACGATGTTTCCTTCATGTTTTACT  Raphanus sativus var. oleiformis
EW718824       <-- AATAGTGATGCATGTAATCCTCTAAAACGATGTTTCCTTCATGTTTTACT  Raphanus sativus var. oleiformis
FY437566       <-- AATAGTGATGCATGTAATCCTCTAAAACGATGTTTCCTTCATGTTTTACT  Raphanus sativus cv GSK3-1
EV537371       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FY446962       --> ..................................................  Raphanus sativus cv GSK3-1
FY440158       --> ..................................................  Raphanus sativus cv GSK3-1
FY433432       --> ..................................................  Raphanus sativus cv GSK3-1
FY433520       --> ..................................................  Raphanus sativus cv GSK3-1
FY434661       --> ..................................................  Raphanus sativus cv GSK3-1
FY451360       --> ..................................................  Raphanus sativus cv GSK3-1
FY447877       --> ..................................................  Raphanus sativus cv GSK3-1
FY447722       --> ..................................................  Raphanus sativus cv GSK3-1
FY450122       --> ..................................................  Raphanus sativus cv GSK3-1
FY453994       --> ..................................................  Raphanus sativus cv GSK3-1
FY436125       --> ..................................................  Raphanus sativus cv GSK3-1
FY439754       --> ..................................................  Raphanus sativus cv GSK3-1
FY433441       --> ..................................................  Raphanus sativus cv GSK3-1
FY438518       --> ..................................................  Raphanus sativus cv GSK3-1
FY436038       --> ..................................................  Raphanus sativus cv GSK3-1
HS106937       --> ..................................................  Raphanus sativus var. niger
FY434197       --> ..................................................  Raphanus sativus cv GSK3-1
EY897089       --> ..................................................  Raphanus raphanistrum subsp. maritimus
HS106980       --> ..................................................  Raphanus sativus var. niger
FY434935       --> ..................................................  Raphanus sativus cv GSK3-1
FD987849       --> ..................................................  Raphanus raphanistrum subsp. landra
FD989084       --> ..................................................  Raphanus raphanistrum subsp. landra
EY913898       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD971152       --> AATAGTAATGCTTGTAATCCTCTAAAACGATGTTTCCTTCATGTTTTACT  Raphanus raphanistrum subsp. raphanistrum (MS)
FY445059       --> AATAGTGATGCATGTAATCCTCTAAAACGATGTTTCCTTCATGTTTTACT  Raphanus sativus cv GSK3-1
EX746124       --> AATAGTAATGCTTGTAATCCTCTAAAACGATGTTTCCTTCATGTT--ACT  Raphanus raphanistrum subsp. maritimus
EW714066       --> AATAGTGATGCATGTAATCCTCTAAAACGATGTTTCCTTCATGTTTTACT  Raphanus sativus var. oleiformis
EW714067       --> AATAGTGATGCATGTAATCCTCTAAAACGATGTTTCCTTCATGTTTTACT  Raphanus sativus var. oleiformis

               1701   -   1751
UN21581        --> GTCACTCTCTTTGTGATTTCTTAAGAATAAATCAATGTTTCTTGGAGCAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY438891       <-- GTCACTCTCTTTGTGATTTCTTAAGA........................  Raphanus sativus cv GSK3-1
FY434250       <-- GTCACTCTCTTTGTGATTTCTTAAGAATAAATCAA...............  Raphanus sativus cv GSK3-1
EV541613       <-- GTCACTCTCTTTGTAATTTCTTAAGAATAAATCAATGTTTCTTGAAGCAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY893497       <-- GTCACTCTCTTTGTAATTTCTTAAGAATAAATCAATGTTTCTTGAAGC..  Raphanus raphanistrum subsp. maritimus
FD967360       <-- GTCACTCTCTTTGTAATTTCTTAAGAATAAATCAATGTTTCTTGAAGC..  Raphanus raphanistrum subsp. raphanistrum (MS)
EX750604       <-- GTCACTCTCTTTGTAATTTCTTAAGAATAAATCAATGTTTCTTGAAGC..  Raphanus raphanistrum subsp. maritimus
FD984907       <-- GTCACTCTCTTTGTAATTTCTTAAGAATAAATCAATGTTTCTTGAAGC..  Raphanus raphanistrum subsp. landra
EW718561       <-- GTCACTCTCTTTGTGATTTCTTAAGAA.......................  Raphanus sativus var. oleiformis
EW718824       <-- GTCACTCTCTTTGTGATTTCTTAAGAATAAATCAATGTTCCTTGG.....  Raphanus sativus var. oleiformis
FY437566       <-- GTCACTCTCTTTG-GATTTCTTAAGAATAAATCA................  Raphanus sativus cv GSK3-1
EV537371       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FY446962       --> ..................................................  Raphanus sativus cv GSK3-1
FY440158       --> ..................................................  Raphanus sativus cv GSK3-1
FY433432       --> ..................................................  Raphanus sativus cv GSK3-1
FY433520       --> ..................................................  Raphanus sativus cv GSK3-1
FY434661       --> ..................................................  Raphanus sativus cv GSK3-1
FY451360       --> ..................................................  Raphanus sativus cv GSK3-1
FY447877       --> ..................................................  Raphanus sativus cv GSK3-1
FY447722       --> ..................................................  Raphanus sativus cv GSK3-1
FY450122       --> ..................................................  Raphanus sativus cv GSK3-1
FY453994       --> ..................................................  Raphanus sativus cv GSK3-1
FY436125       --> ..................................................  Raphanus sativus cv GSK3-1
FY439754       --> ..................................................  Raphanus sativus cv GSK3-1
FY433441       --> ..................................................  Raphanus sativus cv GSK3-1
FY438518       --> ..................................................  Raphanus sativus cv GSK3-1
FY436038       --> ..................................................  Raphanus sativus cv GSK3-1
HS106937       --> ..................................................  Raphanus sativus var. niger
FY434197       --> ..................................................  Raphanus sativus cv GSK3-1
EY897089       --> ..................................................  Raphanus raphanistrum subsp. maritimus
HS106980       --> ..................................................  Raphanus sativus var. niger
FY434935       --> ..................................................  Raphanus sativus cv GSK3-1
FD987849       --> ..................................................  Raphanus raphanistrum subsp. landra
FD989084       --> ..................................................  Raphanus raphanistrum subsp. landra
EY913898       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD971152       --> GTCACTCTCTTTGT-ATTTCTTAAGA-TAAATCAATGTTTCTTGAAGCAa  Raphanus raphanistrum subsp. raphanistrum (MS)
FY445059       --> GTCACTCTCTTTGTGATTTCTTAAGAATAAATCAATGTTTCTTGAAGCAG  Raphanus sativus cv GSK3-1
EX746124       --> GTCACTCTCTTTGTAATTTCTTAAGAATAAATCAATGTTTCTTGAAGC..  Raphanus raphanistrum subsp. maritimus
EW714066       --> GTCACTCTCTTTGTGATTTCTTAAGAATAAATCAATGTTCCTTGG.....  Raphanus sativus var. oleiformis
EW714067       --> GTCACTCTCTTTGTGATTTCTTAAGAATAAATCAATGTTCCTTGG.....  Raphanus sativus var. oleiformis

               1751   -   1801
UN21581        --> TATATATAGCTTATTAAAGTGGAGTATATAAACATGTTCATTTTAGTTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY438891       <-- ..................................................
FY434250       <-- ..................................................
EV541613       <-- T.................................................
EY893497       <-- ..................................................
FD967360       <-- ..................................................
EX750604       <-- ..................................................
FD984907       <-- ..................................................
EW718561       <-- ..................................................
EW718824       <-- ..................................................
FY437566       <-- ..................................................
EV537371       --> ..................................................
FY446962       --> ..................................................
FY440158       --> ..................................................
FY433432       --> ..................................................
FY433520       --> ..................................................
FY434661       --> ..................................................
FY451360       --> ..................................................
FY447877       --> ..................................................
FY447722       --> ..................................................
FY450122       --> ..................................................
FY453994       --> ..................................................
FY436125       --> ..................................................
FY439754       --> ..................................................
FY433441       --> ..................................................
FY438518       --> ..................................................
FY436038       --> ..................................................
HS106937       --> ..................................................
FY434197       --> ..................................................
EY897089       --> ..................................................
HS106980       --> ..................................................
FY434935       --> ..................................................
FD987849       --> ..................................................
FD989084       --> ..................................................
EY913898       --> ..................................................
FD971152       --> ..................................................
FY445059       --> TATATATAGCTTATTAAAGTGGAGTATATAAACATGTTCATTTTAGTTTG
EX746124       --> ..................................................
EW714066       --> ..................................................
EW714067       --> ..................................................

               1801   -   1851
UN21581        --> AC
                   ~~
FY438891       <-- ..
FY434250       <-- ..
EV541613       <-- ..
EY893497       <-- ..
FD967360       <-- ..
EX750604       <-- ..
FD984907       <-- ..
EW718561       <-- ..
EW718824       <-- ..
FY437566       <-- ..
EV537371       --> ..
FY446962       --> ..
FY440158       --> ..
FY433432       --> ..
FY433520       --> ..
FY434661       --> ..
FY451360       --> ..
FY447877       --> ..
FY447722       --> ..
FY450122       --> ..
FY453994       --> ..
FY436125       --> ..
FY439754       --> ..
FY433441       --> ..
FY438518       --> ..
FY436038       --> ..
HS106937       --> ..
FY434197       --> ..
EY897089       --> ..
HS106980       --> ..
FY434935       --> ..
FD987849       --> ..
FD989084       --> ..
EY913898       --> ..
FD971152       --> ..
FY445059       --> AC
EX746124       --> ..
EW714066       --> ..
EW714067       --> ..