1      -     51
UN21606        --> TTTTTTCTTTTTCTAAAATACCTCGATTGTCCAGTAAGATTGATTTCTGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW730928       <-- ..................................................
FD537736       <-- ..................................................
FD985857       <-- ..................................................
FD985610       <-- ..................................................
EX901839       <-- ..................................................
FD989886       --> TTTTTTCTTTTTCTAAAATACCTCGATTGTCCAGTAAGATTGATTTCTGG
EW717505       --> ..................................................
EW724464       --> ..................................................
EW725760       --> ..................................................
FD541461       --> ..................................................
FD990178       --> ..................................................

               51     -    101
UN21606        --> ATACCTTCTTGTAGGTTATAGACTTGAACAGTCAATGCACTCATCTATAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW730928       <-- ..................................................
FD537736       <-- ..................................................
FD985857       <-- ..................................................
FD985610       <-- ..................................................
EX901839       <-- ..................................................
FD989886       --> ATACCTTCTTGTAGGTTATAGACTTGAACAGTCAATGCACTCATCTATAA
EW717505       --> ..................................................
EW724464       --> ..................................................
EW725760       --> ..................................................
FD541461       --> ..................................................
FD990178       --> ..................................................

               101    -    151
UN21606        --> AATTAAGCTCAGTGTCTTATAAGCAGCGGACCTTTACACAGAAATCTAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW730928       <-- ..................................................
FD537736       <-- ..................................................
FD985857       <-- ..................................................
FD985610       <-- ..................................................
EX901839       <-- ..................................................
FD989886       --> AATTAAGCTCAGTGTCTTATAAGCAGCTTACCTTTACACAGAAATCTAAT
EW717505       --> ...........................GGACCTTACCACAGAAATCTAAT
EW724464       --> ...........................GGACCTTTACACAGAAATCTAAT
EW725760       --> ...........................GGACCTTTACACAGAAATCTAAT
FD541461       --> ...........................GGACCTTTACACAGAAATCTAAT
FD990178       --> ..................................................

               151    -    201
UN21606        --> TCAAAAAGTATATTCCAATGAGGAGTCTTATATTTCTCACAATTTTTTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW730928       <-- ..................................................
FD537736       <-- ..................................................
FD985857       <-- ..................................................
FD985610       <-- ..................................................
EX901839       <-- ..................................................
FD989886       --> TCAAAAAGTATATTCCAATGAGGAGTCTTATATTTCTCACAATTTTTTCT
EW717505       --> TCAAAAAGTATATGCCAATGAGGAGTCTTATATTTTTCGTAATTATATTT
EW724464       --> TCAAAAAGTATATTCCAATGAGGAGTCTTATATTTCTCACAATTTTTTCT
EW725760       --> TCAAAAAGTATATTCCAATGAGGAGTCTTATATTTCTCACAATTTTTTCT
FD541461       --> ACAAAAAGTATATTCCAATGAGGAGTCTTATATTTTTCACAATTTTTTCT
FD990178       --> ..................................................

               201    -    251
UN21606        --> CTCTTGGCTTTAACCTTTCCAGTAGCCATTGCTTCTGACCCAAGCCCCGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW730928       <-- ......................................CCCAAGCCCCGT
FD537736       <-- ..................................................
FD985857       <-- ..................................................
FD985610       <-- ..................................................
EX901839       <-- ..................................................
FD989886       --> CTCTTGGCTTTAACCTTTCCAGTAGCCATGGCTTCTGACCCAAGCCCCGT
EW717505       --> TTCTTGGCTTTCACCTTTCCAGTAGCCATTGCTTCTGACCCAAGCCCCGT
EW724464       --> CTCTTGGCTTTAACCTTTCCAGTAGCCATTGCTTCTGACCCAAGCCCCGT
EW725760       --> CTCTTGGCTTTAACCTTTCCAGTAGCCATTGCTTCTGACCCAAGCCCCGT
FD541461       --> CTCTTGGCTTTAACCTTTCCAGTAGCCATTGCTTCTGACCCAAGCCCCGT
FD990178       --> ..................................................

               251    -    301
UN21606        --> TCAAGACTTTTGTGTGGGCGTAAACACCCCGGCCGATGGTGTGTTTGTTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW730928       <-- TCAAGACTTTTGTGTGGGCGTAAACACCCCGGCCGATGGTGTGTTTGTTA
FD537736       <-- ..................................................
FD985857       <-- ..................................................
FD985610       <-- ..................................................
EX901839       <-- ..................................................
FD989886       --> TCAAGACTTTTGTGTGGGCGTAAACACCCCGGCCGATGGTGTGTTTGTTA
EW717505       --> TCAAGACTTTTGTGTGGGCGTAAACACCCCAGCCGATGGTGTGTTTGTTA
EW724464       --> TCAAGACTTTTGTGTGGGCGTAAACACCCCGGCCGATGGTGTGTTTGTTA
EW725760       --> TCAAGACTTTTGTGTGGGCGTAAACACCCCGGCCGATGGTGTGTTTGTTA
FD541461       --> TCAAGACTTTTGTGTGGGCGTAAACACCCCGGCCGATGGTGTGTTTGTTA
FD990178       --> ..................................................

               301    -    351
UN21606        --> ACGGAAAGTTCTGCAAAGACCCAAAGCTCGCCACAGTAGACGACTTCTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW730928       <-- ACGGAAAGTTCTGCAAAGACCCAAAGCTCGCCACAGTAGACGACTTCTTT
FD537736       <-- .......................AAGCTCGCCACAGTAGACGACTTCTTT
FD985857       <-- ..................................................
FD985610       <-- ..................................................
EX901839       <-- ..................................................
FD989886       --> ACGGAAAGTTCTGCAAAGACCCAAAGCTCGCCACAGTAGACGACTTCTTT
EW717505       --> ACGGAAAGTTCTGCAAAGACCCAAAGCTCGCCACAGTAGACGACTTCTTT
EW724464       --> ACGGAAAGTTCTGCAAAGACCCAAAGCTCGCCACAGTAGACGACTTCTTT
EW725760       --> ACGGAAAGTTCTGCAAAGACCCAAAGCTCGCCACAGTAGACGACTTCTTT
FD541461       --> ACGGAAAGTTCTGCAAAGACCCAAAGCTCGCCACAGTAGACGACTTCTTT
FD990178       --> ..................................................

               351    -    401
UN21606        --> TTCACAGGGCTTGACAGGCAAAGAATCGCAACTAATGCGGTTGGAACAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW730928       <-- TTCACAGGGCTTGACAGGCAAAGAATCGCAACTAATGCGGTTGGAACAAA
FD537736       <-- TTCACAGGGCTTGACAGGCAAAGAATCGCAACTAATGCGGCTGGAACAAA
FD985857       <-- .................................AATGCGGTTGGAACAAA
FD985610       <-- ..................................ATGCGGTTGGAACAAA
EX901839       <-- ..................................................
FD989886       --> TTCACAGGGCTTGACAGGCAAAGAATCGCAACTAATGCGGTTGGAACAAA
EW717505       --> TTCACAGGGCTTGACAGGCAAAGAATCGCAACTAATGCGGTTGGAACAAA
EW724464       --> TTCACAGGGCTTGACAGGCAAAGAATCGCAACTAATGCGGTTGGAACAAA
EW725760       --> TTCACAGGGCTTGACAGGCAAAGAATCGCAACTAATGCGGTTGGAACAAA
FD541461       --> TTCACAGGGCTTGACAGGCAAAGAATCGCAACTAATGCGGCTGGAACAAA
FD990178       --> ..................................................

               401    -    451
UN21606        --> TGTGACACCCGTCTTTTCTGATAACCTTCCTGGGCTCAACACCCTTGGCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW730928       <-- TGCGACACCCGTCTTTTTTGATAACCTTCCTGGGCTCAACACCCTTGGCA
FD537736       <-- TGTGACACCCGTCTTTTCTGATAACCTTCCTGGGCTCAACACCCTTGGAA
FD985857       <-- TGTGACACCCGTCTTTTCTGATAACCTTCCTGGGCTCAACACCCTTGGCA
FD985610       <-- TGTGACACCCGTCTTTTCTGATAACCTTCCTGGGCTCAACACCCTTGGCA
EX901839       <-- ..................................................
FD989886       --> TGTGACACCCGTCTTTTCTGATAACCTTCCTGGGCTCAACACCCTTGGCA
EW717505       --> TGTGACATCCGTCTTTTCTGATAACCTTCCTGGGCTCAACACCCTTGGAA
EW724464       --> TGTGACACCCGTCTTTTCTGATAACCTTCCTGGGCTCAACACCCTTGGCA
EW725760       --> TGCGACACCCGTCTTTTCTGATAACCTTCCTGGGCTCAACACCCTTGGCA
FD541461       --> TGTGACACCCGTCTTTTCTGATAACCTTCCTGGGCTCAACACCCTTGGAA
FD990178       --> ..................................................

               451    -    501
UN21606        --> TAGCATTTGCTCGTGTAGATTATGCACTAAACGGGCTGATCCCACCTCAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW730928       <-- TAGCATTTGCTCGCGTAGATTATGCACTAAACGGGCTGATCCCACCTCAC
FD537736       <-- TAGCATTTGCTCGTGTAGATTATGCACTAAACGGGCTGATCCCACCTCAC
FD985857       <-- TAGCATTTGCTCGTGTAGATTATGCACTAAACGGGCTGATCCCACCTCAC
FD985610       <-- TAGCATTTGCTCGTGTAGATTATGCACTAAACGGGCTGATCCCACCTCAC
EX901839       <-- ..................................................
FD989886       --> TAGCATTTGCTCGTGTAGATTATGCACTAAACGGGCTGATCCCACCTCAC
EW717505       --> TAGCATTTGCTCGTGTAGATTATGCACTAAACGGGCTGATCCCACCTCAC
EW724464       --> TAGCATTTGCTCGCGTAGATTATGCACTAAACGGGCTGATCCCACCTCAC
EW725760       --> TAGCATTTGCTCGCGTAGATTATGCACTAAACGGGCTGATCCCACCTCAC
FD541461       --> TAGCATTTGCTCGTGTAGATTATGCACTAAACGGGCTGATCCCACCTCAC
FD990178       --> ..................................................

               501    -    551
UN21606        --> ACCCATCCACGTGCCAGCGAGTTCTTGATTGTCCAAGAAGGAACGCTTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW730928       <-- ACCCATCCACGTGCCAGCGAGTTCTTGATTGTCCAAGAAGGAACGCTTTT
FD537736       <-- ACCCATCCACGTGCCAGCGAGTTCTTGATTGTCCAAGAAGGAACGCTTTT
FD985857       <-- ACCCATCCACGTGCCAGCGAGTTCTTGATTGTCCAAGAAGGAACGCTTTT
FD985610       <-- ACCCATCCACGTGCCAGCGAGTTCTTGATTGTCCAAGAAGGAACGCTTTT
EX901839       <-- ..................................................
FD989886       --> ACCCATCCACGTGCCAGCGAGTTCTTGATTGTCCAAGAAGGAACGCTTTT
EW717505       --> ACCCATCCACGTGCCAGCGAGTTCTTGATTGTCCAAGAAGGAACGCTTTT
EW724464       --> ACCCATCCACGTGCCAGCGAGTTCTTGATTGTCCAAGAAGGAACGCTTTT
EW725760       --> ACCCATCCACGTGCCAGCGAGTTCTTGATTGTCCAAGAAGGAACGCTTTT
FD541461       --> ACCCATCCACGTGCCAGCGAGTTCTTGATTGTCCAAGAAGGAACGCTTTT
FD990178       --> ..................................................

               551    -    601
UN21606        --> CGCGGGTTTTGTCTCGTCAGACCAAGACGGAAATCGTCTATTC-TCCAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW730928       <-- CGCGGGTTTTGTCTCGTCAGACCAAGACGGAAATCGTCTATTC-TCCAAA
FD537736       <-- CGCGGGTTTTGTCTCGTCAGACCAAGACGGAAATCGTCTATTC-TCCAAA
FD985857       <-- CGCGGGTTTTGTCTCGTCAGACCAAGACGGAAATCGTCTATTT-TCCAAA
FD985610       <-- CGCGGGTTTTGTCTCGTCAGACCAAGACGGAAATCGTTTATTT-TCCAAA
EX901839       <-- ..................AGACCAAGACGGAAATCGTCTATTC-TCCAAA
FD989886       --> CGCGGGTTTTGTCTCGTCAGACCAA.........................
EW717505       --> CGCGGGTTTTGTCTCGTCAGACCAAGACGGAAATCGTCTATTC-TCCAAA
EW724464       --> CGCGGGTTTTGTCTTGTCAGACCAAGACGGAAATCGTCTATTC-TCCAAA
EW725760       --> CGCGGGTTTTGTCTCGTCAGACCAAGACGGAAATCGTCTATTC-TCCAAA
FD541461       --> CGCGGGTTTTGTCTCGTCAGACCAAGACGGAAATCGTCTATTC-TCCAAA
FD990178       --> .............TCGTCAGACCAAGACGGAAATCGTCTATTCCTCCAAA

               601    -    651
UN21606        --> ATACTCAACAAGGGTGAT-CTGATT-GTGTTT-CCAGTGGGACTCATCCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW730928       <-- ATACTCAACAAGGGTGAT-CTGATT-GTGTTT-CCAGTGGGACTCATCCA
FD537736       <-- ATACTCAACAAGGGTGAT-CTGATT-GTGTTT-CCAGTGGGACTCATCCA
FD985857       <-- ATACTCAACAAGGGTGAT-CTGATT-GTGTTT-CCAGTGGGACTCATCCA
FD985610       <-- ATACTCAACAAGGGTGAT-CTGATT-GTGTTT-CCAGTGGGATTCATCCA
EX901839       <-- ATACTCAACAAGGGTGAT-CTGACT-GTGTTT-CCAGTGGGACTCATCCA
FD989886       --> ..................................................
EW717505       --> ATACTCAACAAGGGTGAT-CTGATT-GTGTTT-CCAGTGGGACTCATCCA
EW724464       --> ATACTCAACAAGGGTGAT-CTGATT-GTGTTT-CCAGTGGGACTCATCCA
EW725760       --> ATACTCAACAAGGGTGAT-CTGATT-GTGTTT-CCAGTGGGACTCATCCA
FD541461       --> ATACTCAACAAGGGTGAT-CTGATT-GTGTTT-CCAGTGGGACTCATCCA
FD990178       --> ATACTCAACAAGGGTGATTCTGATTTGTGTTTTCCAGTGGGACTCATCCA

               651    -    701
UN21606        --> TTT-CCATGTCAATGTGGGACAATGTCCAGCAGTTGCATTCACTGCTTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW730928       <-- TTT-CCATGTCAATGTGGGACAATGTCCAGCAGTTGCATTCACCGCTTTT  Raphanus sativus cv Early Scarlet Globe
FD537736       <-- TTT-CCATGTCAATGTGGGACAATGTCCAGCAGTTGCATTCACTGCTTTT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD985857       <-- TTT-CCATGTCAATGTGGGACAATGTCCAGCAGTTGCATTCACTGCTTTT  Raphanus raphanistrum subsp. landra
FD985610       <-- TTT-CCATGTCAATGTGGGACAATGTCCAGCAGTTGCATTCACTGCTTTT  Raphanus raphanistrum subsp. landra
EX901839       <-- TTT-CCATGTCAATGTGGGACAATGTCCAGCAGTTGCATTCACCGCTTTT  Raphanus sativus cv Early Scarlet Globe
FD989886       --> ..................................................  Raphanus raphanistrum subsp. landra
EW717505       --> TTT-CCATGTCAATGTGGGACAATGTCCAGCAGTTGCATTCACTGCTTTT  Raphanus sativus var. oleiformis
EW724464       --> TTT-CCATGTCAATGTGGGACAATGTCCAGCAGTTGCATTCACCGCTTTT  Raphanus sativus cv Early Scarlet Globe
EW725760       --> TTT-CCATGTCAATGTGGGACAATGTCCAGCAGTTGCATTCACCGCTTTT  Raphanus sativus cv Early Scarlet Globe
FD541461       --> TTT-CCATGTCAATGTGGGACAATGTCCAGCAGTTGCATTCACTGCTTTT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD990178       --> TTTTCCATGTCAATGTGGGACAATGTCCAGCAGTTGCATTCACTGCTTTT  Raphanus raphanistrum subsp. landra

               701    -    751
UN21606        --> AACAGCCAAAACCCAGGTCTCATCACTGTTTCTAAAAGCGTGTTTGGGTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW730928       <-- AACAGCCAAAACCCAGGTCTCATCACTGTTGCTAAAAGCGTGTTTGGGTC  Raphanus sativus cv Early Scarlet Globe
FD537736       <-- AGCAGCCAAAACCCAGGTCTCATCACTGTTTCTAAAAGCGTGTTTGGGTC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD985857       <-- AACAGCCAAAACCCAGGTTTCATCACTGTTTTTAAAAGCGTGTTTGGGTC  Raphanus raphanistrum subsp. landra
FD985610       <-- AACAGCCAAAACCCAGGTTTCATCACTGTTTTTAAAAGCGTGTTTGGGTC  Raphanus raphanistrum subsp. landra
EX901839       <-- AACAGCCAAAACCCAGGTCTCATCACTGTTGCTAAAAGCGTGTTTGGGTC  Raphanus sativus cv Early Scarlet Globe
FD989886       --> ..................................................  Raphanus raphanistrum subsp. landra
EW717505       --> AACAGCCAAAACCCAGGTCTCATCACTGTTGCTAAAAGCGTGTTTGGGTC  Raphanus sativus var. oleiformis
EW724464       --> AACAGCCAAAACCCAGGTCTCATCACTGTTGCTAAAAGCGTGTTTGGGTC  Raphanus sativus cv Early Scarlet Globe
EW725760       --> AACAGCCAAAACCCAGGTCTCATCACTGTTGCTAAAAGCGTGTTTGGGTC  Raphanus sativus cv Early Scarlet Globe
FD541461       --> AGCAGCCAAAACCCAGGTCTCATCACTGTTTCTAAAAGCGTGTTTGGGTC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD990178       --> AACAGCCAAAACCCAGGTCTCATCACTGTTTCTAAAAGCGTGTTTGGGTC  Raphanus raphanistrum subsp. landra

               751    -    801
UN21606        --> TAACCCACGGATAAACCCAAATGTTCTTGCAAAAGCATTCCAGTTGGATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW730928       <-- TAACCCACGGATAAACCCAAATGTTCTTGCAAAAGCATTCCAGTTGGATC
FD537736       <-- TAACCCACGGATAAACCCAAATGTTCTTGCAAAAGCATTCCAGTTGGATC
FD985857       <-- TAACCCACGGATAAACCCAAATGTTCTTGCAAAAGCATTCCAGTTGGATC
FD985610       <-- TAACCCACGGATAAACCCAAATGTTCTTGGGAAAGCATTCCAGTTGGATC
EX901839       <-- TAACCCACGGATAAACCCAAATGTTCTTGCAAAAGCATTCCAGTTGGATC
FD989886       --> ..................................................
EW717505       --> TAACCCACGGATAAACCCAAATGTCCTTGCAAA-GCATTCCAGTTGGATC
EW724464       --> TAACCCACGGATAAACCCAAATGTTCTTGCAAAAGCATTCCAGTTGGATC
EW725760       --> TAACCCACGGATAAACCCAAATGTTCTTGCAAAgcatc............
FD541461       --> TA................................................
FD990178       --> TAACCCACGGATAAACCCAAATGTTCTTGCAAAAGCATTCCAGTTGGATC

               801    -    851
UN21606        --> CTACGATTGTCATGAGCCTACAGACCAAATTCTGATCATGGAATGAAAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW730928       <-- CTAGGATTGTCATGAGCCTACAGACCAAATTCTGATCATGGAA-------  Raphanus sativus cv Early Scarlet Globe
FD537736       <-- CTACGATTGTCATGAGCCTACAGACCAAATTCTGATCATGGAATGAAA-T  Raphanus raphanistrum subsp. raphanistrum (MS)
FD985857       <-- CTACGATTGTCATGAGCCTACAGACCAAATTCTGATCATGGAATGAAA-T  Raphanus raphanistrum subsp. landra
FD985610       <-- CTACGATTGTCATGAGCCTACAGACCAAATTCTGATCATGGAATGAAA-T  Raphanus raphanistrum subsp. landra
EX901839       <-- CTAGGATTGTCATGAGCCTACAGACCAA......................  Raphanus sativus cv Early Scarlet Globe
FD989886       --> ..................................................  Raphanus raphanistrum subsp. landra
EW717505       --> CTACGATTGTCATGAGCCTACAGAC-AAATTCTGATCATGGAATGAAAAT  Raphanus sativus var. oleiformis
EW724464       --> CTAGGATTGTCATGAGCCTACATACCAAATTCTGATCATGGAATGAAAA-  Raphanus sativus cv Early Scarlet Globe
EW725760       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD541461       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD990178       --> CTACGATTGTCATGAGCCTACA............................  Raphanus raphanistrum subsp. landra

               851    -    901
UN21606        --> AGAAAAATATTGAGCTTTTAACTGTTTTCTATTTCTTTACCGTTGTCTAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW730928       <-- TGAAAAATATTGAGCTTTTAATTGTTTTCTCTTTCTTTACCGTTGTCTGA
FD537736       <-- -GAAAAATATTGAGCTTTTAACTGTTTTCTATTTCTTTACCGTTGTCTAA
FD985857       <-- -GAAAAATATTGAGCTTTTAACTGTTTTCTATTTCTTTACCGTTGTCTAA
FD985610       <-- -GAAAAATATTGAGCTTTTAACTGTTTTCTATTTCTTTACCGTTGTCTAA
EX901839       <-- ..................................................
FD989886       --> ..................................................
EW717505       --> Attgagcttt........................................
EW724464       --> ------ATATTGAGCTTTTAATTGTTTTCTCTTTCTTTACCGTTGTCTga
EW725760       --> ..................................................
FD541461       --> ..................................................
FD990178       --> ..................................................

               901    -    951
UN21606        --> ATAAGGATCGTGTATTATCCATCAGTGCATCAATAAAGTGACATAAAGTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW730928       <-- ATAAGGATCATGTATTATCCATCAGTGCATCAATAAAGTGACATAAAGTA
FD537736       <-- ATAAGGATCGTGTATTATCCATCAGTGCATCAATAAAGTGACATAAAGTA
FD985857       <-- ATAAGGATCGTGTATTATCCATCAGTGCATCAATAAAGTGACATAAAGTA
FD985610       <-- ATAAGGATCGTGTATTATCCATCAGTGCATCAATAAAGTGACATAAAGTA
EX901839       <-- ..................................................
FD989886       --> ..................................................
EW717505       --> ..................................................
EW724464       --> a.................................................
EW725760       --> ..................................................
FD541461       --> ..................................................
FD990178       --> ..................................................

               951    -   1001
UN21606        --> ATGCTTACAAAATTACTTCTCC
                   ~~~~~~~~~~~~~~~~~~~~~~
EW730928       <-- ATGCTTACg.............
FD537736       <-- ATGCTTACAAAATTACTTCTCC
FD985857       <-- ATGCTTAC..............
FD985610       <-- ATGCTTAC..............
EX901839       <-- ......................
FD989886       --> ......................
EW717505       --> ......................
EW724464       --> ......................
EW725760       --> ......................
FD541461       --> ......................
FD990178       --> ......................