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Alignment for radish unigene UN21622

               1      -     51
UN21622        --> GGGGTTGGTATAAAAGAAGAGGAGAAGAACAAAAAAGAAAGATAGCACAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW719655       <-- GGGGTTGGTATAAAAGAAGAGGACAAGAACAAAAAAGAAAGATAGCACAA  Raphanus sativus var. oleiformis
EV573675       <-- .GGGTTGGTATAAAAGAAGAGGAGAAGAACAAAAAAGAAAGATAGCACAA  Raphanus raphanistrum subsp. landra
EV530578       <-- .......ggATAAAAGAAGAGGAGAAGAACAAAAAAGAAAGATAGCACAA  Raphanus raphanistrum subsp. maritimus
FD943373       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY918323       <-- ..................................................  Raphanus raphanistrum subsp. landra
EV546869       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EW718380       <-- ..................................................  Raphanus sativus var. oleiformis
EW718640       <-- ..................................................  Raphanus sativus var. oleiformis
EW721388       <-- ..................................................  Raphanus sativus var. oleiformis
EW714539       --> GGGGTTGGTATAAAAGAAGAGGACAAGAACAAAAAAGAAAGATAGCACAA  Raphanus sativus var. oleiformis
EW716952       --> .GGGTTGGTATAAAAGAAGAGGACAAGAACAAAAAAGAAAGATAGCACAA  Raphanus sativus var. oleiformis
FD989713       --> ....ggGGTATAAAAGAAGAGGAGAAGAACAAAAAAGAAAGATAGCACAA  Raphanus raphanistrum subsp. landra
EW713564       --> ....gggggATAAAAGAAGAGGA-CAGAACAAAAAAGAAAGATAGCACAA  Raphanus sativus var. oleiformis
EX898235       --> .............................CAAAAAAGAAAGATAGCACAA  Raphanus sativus cv Early Scarlet Globe
EV569082       --> ..................................AAGAAAGATAGCACAA  Raphanus raphanistrum subsp. landra
EY922348       --> .............................................gACAA  Raphanus raphanistrum subsp. landra
EV551836       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV525980       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD947420       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EW713563       --> ..................................................  Raphanus sativus var. oleiformis
EX889655       --> ..................................................  Raphanus sativus var. oleiformis

               51     -    101
UN21622        --> ACAGAGAAACTTATCAAAGCTAAAATCACTTGATACAATGAAGCTAATTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW719655       <-- ACAGAGAAACTTATCAAAGCTAAAATCACTTGATA--CTGAAGCTAATTA
EV573675       <-- ACAGAGAAACTTATCAAAGCTAAAATCACTTGATACAATGAAGCTAATTA
EV530578       <-- ACAGAGAAACTTATCAAAGCTAAAATCACTTGATACAATGAAGCTAATTA
FD943373       <-- ...........................................gTAATTA
EY918323       <-- ..................................................
EV546869       <-- ..................................................
EW718380       <-- ..................................................
EW718640       <-- ..................................................
EW721388       <-- ..................................................
EW714539       --> ACAGAGAAACTTATCAAAGCTAAAATCACTTGATAC--TGAAGCTAATTA
EW716952       --> ACAGAGAAACTTATCAAAGCTAAAATCACTTGATACAATGAAGCTAATTA
FD989713       --> ACAGAGAAACTTATCAAAGCTAAAATCACTTGATACAATGAAGCTAATTA
EW713564       --> ACAGAGAAACTTATCAAAGCTAAAATCACTTGATACAATGAAGCTAATTA
EX898235       --> ACAGAGAAACTTATCAAAGCTAAAATCACTTGATACAATGAAGCTAATTA
EV569082       --> ACAGAGAAACTTATCAAAGCTAAAATCACTTGATACAATGAAGCTAATTA
EY922348       --> ACAGAGAAACTTATCAAAGCTAAAATCACTTGATACAATGAAGCTAATTA
EV551836       --> .................................TACAATGAAGCTAATTA
EV525980       --> ..................................................
FD947420       --> ..................................................
EW713563       --> ..................................................
EX889655       --> ..................................................

               101    -    151
UN21622        --> GAGTCTCCTGCTTGCTTTGTGTATTGGCCTTTTTATTGTTTATAACTCCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW719655       <-- GAGTCTCCTGCTTGCTTTGTGTATTGGCCTTTTTATTGTTTATAACTCCA
EV573675       <-- GAGTCTCCTGCTTGCTTTGTGTATTGGCCTTTTTATTGTTTATAACTCCA
EV530578       <-- TAGTCTCCTGCTTGCTTTGTGTATTGGCCTTTTTATTGTTTATAACTCCA
FD943373       <-- GAGTCTCCTGCTTGCTTTGTGTATTGGCCTTTTTATTGTTTATAACTCCA
EY918323       <-- ..................................................
EV546869       <-- ..................................................
EW718380       <-- ..................................................
EW718640       <-- ..................................................
EW721388       <-- ..................................................
EW714539       --> GAGTCTCCTGCTTGCTTTGTGTATTGGCCTTTTTATTGTTTATAACTCCA
EW716952       --> GAGTCTCCTGCTTGCTTTGTGTATTGGCCTTTTTATTGTTTATAACTCCA
FD989713       --> GAGTCTCCTGCTTGCTTTGTGTATTGGCCTTTTTATTGTTTATAACTCCA
EW713564       --> GAGTCTCCTGCTTGCTTTGTGTATTGGCCTTTTTATTGTTTATAACTCCA
EX898235       --> GAGTCTCCTGCTTGCTTTGTGTATTGGCCTTTTT-TTGTTTATAACTCCA
EV569082       --> GAGTCTCCTGCTTGCTTTGTGTATTGGCCTTTTTATTGTTTATAACTCCA
EY922348       --> GAGTCTCCTGCTTGCTTTGTGTATTGGCCTTTTTATTGTTTATAACTCCA
EV551836       --> GAGTCTCCTGCTTGCTTTGTGTATTGGCCTTTTTATTGTTTATAACTCCA
EV525980       --> ..................................................
FD947420       --> ..................................................
EW713563       --> ..................................................
EX889655       --> ..................................................

               151    -    201
UN21622        --> ACATCTTCTCTGCAACTCCACACTAGCTACTCATCTCCGAGCCAAG---G
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW719655       <-- ACATCTTTTCTGCAACTCCACACTAGCTACTCATCTCCGAGCCAAGCAGG  Raphanus sativus var. oleiformis
EV573675       <-- ACATCTTCTCTGCAACTCCACACTAGCTACTCACCTCCGAGCCAAGCAGG  Raphanus raphanistrum subsp. landra
EV530578       <-- ACATCTTCTCTGCAACTCCACACTAGCTACTCATCTCCGAGCCAAG---G  Raphanus raphanistrum subsp. maritimus
FD943373       <-- ACATCTTCTCTGCAACTCCACACTAGCTACTCATCTCCGAGCCAAGCAGG  Raphanus sativus cv Early Scarlet Globe
EY918323       <-- .....tttttTGCAACTCCACACTAACTACTCATTTCCGAGCCAAGCAGG  Raphanus raphanistrum subsp. landra
EV546869       <-- ....................................CCGAGCCAAG---G  Raphanus raphanistrum subsp. raphanistrum (NY)
EW718380       <-- ..............................tttccgagccaagcAG---G  Raphanus sativus var. oleiformis
EW718640       <-- ..................................cgagccaagcAG---G  Raphanus sativus var. oleiformis
EW721388       <-- ..............................tttccgagccaagcAG---G  Raphanus sativus var. oleiformis
EW714539       --> ACATCTTCTCTGCAACTCCACACTAGCTACTCATCTCCGAGCCAAGCAGG  Raphanus sativus var. oleiformis
EW716952       --> ACATCTTCTCTGCAACTCCACACTAGCTACTCATCTCCGAGCCAAGCAGG  Raphanus sativus var. oleiformis
FD989713       --> ACATCTTCTCTGCAACTCCGCACTAGCTACTCATCTCCGAGCCAAGCAGG  Raphanus raphanistrum subsp. landra
EW713564       --> ACATCTTCTCTGCAACTCCACACTAGCTACTCATCTCCGAGCCAAGCAGG  Raphanus sativus var. oleiformis
EX898235       --> ACATCTTCTCTGCAACTCCACACTAGCTACTCATCTCCGAGCCAAGCAGG  Raphanus sativus cv Early Scarlet Globe
EV569082       --> ACATCTTCTCTGCAACTCCACACTAGCTACTCACCTCCGAGCCAAGCAGG  Raphanus raphanistrum subsp. landra
EY922348       --> ACATCTTCTCTGCAACTCCACACTAACTACTCATCTCCGAGCCAAGCAGG  Raphanus raphanistrum subsp. landra
EV551836       --> ACATCTTCTCTGCAACTCCACACTAGCTACTCATCTCCGAGCCAAG---G  Raphanus raphanistrum subsp. raphanistrum (NY)
EV525980       --> ..ATCTTCTCTGCAACTCCACACTAGCTACTCATCTCCGAGCCAAG---G  Raphanus raphanistrum subsp. maritimus
FD947420       --> ............................ACTCATCTCCGAGCCAAGCAGG  Raphanus sativus cv Early Scarlet Globe
EW713563       --> ..................................................  Raphanus sativus var. oleiformis
EX889655       --> ..................................................  Raphanus sativus var. oleiformis

               201    -    251
UN21622        --> TATAAGCGAAAAGATTGTTATTAAGATGGCGCCACGGAAGCTCATGATCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW719655       <-- TATAAGCGAAAAGATTGTTATTAAGATGGCGCCACGGAAGCTCATGATCA  Raphanus sativus var. oleiformis
EV573675       <-- TGTAAGCGAAAAGATTGTTATTAAGATGGCGCCACGGAAGCTCATGATCA  Raphanus raphanistrum subsp. landra
EV530578       <-- TGTAAGCGAAAAGATTGTTATTAAGATGGCGCCACGGAAGCTCATGATCA  Raphanus raphanistrum subsp. maritimus
FD943373       <-- TATAAGCGAAAAGATTGTTATTAAGATGGCGCCACGGAAGCTCATGATCA  Raphanus sativus cv Early Scarlet Globe
EY918323       <-- TGTAAGCGAAAAGATTGTTATTAAGATGGCGCCACGGAAGCTCATGATCA  Raphanus raphanistrum subsp. landra
EV546869       <-- TGTAAGCGAAAAGATTGTTATTAAGATGGCGCCACGGAAGCTCATGATCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EW718380       <-- TATAAGCGAAAAGATTGTTATTAAGATGGCGCCACGGAAGCTCATGATCA  Raphanus sativus var. oleiformis
EW718640       <-- TATAAGCGAAAAGATTGTTATTAAGATGGCGCCACGGAAGCTCATGATCA  Raphanus sativus var. oleiformis
EW721388       <-- TATAAGCGAAAAGATTGTTATTAAGATGGCGCCACGGAAGCTCATGATCA  Raphanus sativus var. oleiformis
EW714539       --> TATAAGCGAAAAGATTGTTATTAAGATGGCGCCACGGAAGCTCATGATCA  Raphanus sativus var. oleiformis
EW716952       --> TATAAGCGAAAAGATTGTTATTAAGATGGCGCCACGGAAGCTCATGATCA  Raphanus sativus var. oleiformis
FD989713       --> TGTAAGCGAAAAGATTGTTATTAAGATGGCGCCACGGAAGCTCATGATCA  Raphanus raphanistrum subsp. landra
EW713564       --> TATAAGCGAAAAGATTGTTATTAAGATGGCGCCACGGAAGCTCATGATCA  Raphanus sativus var. oleiformis
EX898235       --> TATAAGCGAAAAGATTGTTATTAAGATGGC--CACGGAAGCTCATGATCA  Raphanus sativus cv Early Scarlet Globe
EV569082       --> TGTAAGCGAAAAGATTGTTATTAAGATGGCGCCACGGAAGCTCATGATCA  Raphanus raphanistrum subsp. landra
EY922348       --> TGTAAGCGAAAAGATTGTTATTAAGATGGCGCCACGGAAGCTCATGATCA  Raphanus raphanistrum subsp. landra
EV551836       --> TGTAAGCGAAAAGATTGTTATTAAGATGGCGCCACGGAAGCTCATGATCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV525980       --> TGTAAGCGAAAAGATTGTTATTAAGATGGCGCCACGGAAGCTCATGATCA  Raphanus raphanistrum subsp. maritimus
FD947420       --> TATAAGCGAAAAGATTGTTATTAAGATGGCGCCACGGAAGCTCATGATCA  Raphanus sativus cv Early Scarlet Globe
EW713563       --> ..................................................  Raphanus sativus var. oleiformis
EX889655       --> ..................................................  Raphanus sativus var. oleiformis

               251    -    301
UN21622        --> TCTCTAGTGAACATGAAAATGTGATGAAGTCAGGAACTCATGAAGGTTCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW719655       <-- TCTCTAGTGAACATGAAAATGTGATGAAGTCAGGAACTCATGAAGGTTCA
EV573675       <-- TCTCTAGTGAACATGAAAATGTGATGAAGTCAGGAACTCATGAAGGTTCA
EV530578       <-- TCTCTAGTGAACATGAAAATGTGATGAAGTCAGGAACTCATGAAGGTTCA
FD943373       <-- TCTCTAGTGAACATGAAAATGTGATGAAGTCAGGAACTCATGAAGGTTCA
EY918323       <-- TCTCTAGTGAACATGAAAATGTGATGAAGTCAGGAACTCATGAAGGTTCA
EV546869       <-- TCTTTAGTGAACATGAAAATGTGATGAAGTCAGGAACTCATGAAGGTTCA
EW718380       <-- TTTTTAGTGAACATGAAAATGTGATGAAGTCAGGAACTCATGAAGGTTCA
EW718640       <-- TTTTTAGTGAACATGAAAATGTGATGAAGTCAGGAACTCATGAAGGTTCA
EW721388       <-- TTTTTAGTGAACATGAAAATGTGATGAAGTCAGGAACTCATGAAGGTTCA
EW714539       --> TCTCTAGTGAACATGAAAATGTGATGAAGTCAGGAACTCATGAAGGTTCA
EW716952       --> TCTCTAGTGAACATGAAAATGTGATGAAGTCAGGAACTCATGAAGGTTCA
FD989713       --> TCTCTAGTGAACATGAAAATGTGATGAAGTCAGGAACTCATGAAGGTTCA
EW713564       --> TCTCTAGTGAACATGAAAATGTGATGAAGTCAGGAACTCATGAAGGTTCA
EX898235       --> TCTCTAGTGAACATGAAAATGTGATGAAGTCAGGAACTCATGAAGGTTCA
EV569082       --> TCTCTAGTGAACATGAAAATGTGATGAAGTCAGGAACTCATGAAGGTTCA
EY922348       --> TCTCTAGTGAACATGAAAATGTGATGAAGTCAGGAACTCATGAAGGTTCA
EV551836       --> TCTCTAGTGAACATGAAAATGTGATGAAGTCAGGAACTCATGAAGGTTCA
EV525980       --> TCTCTAGTGAACATGAAAATGTGATGAAGTCAGGAACTCATGAAGGTTCA
FD947420       --> TCTCTAGTGAACATGAAAATGTGATGAAGTCAGGAACTCATGAAGGTTCA
EW713563       --> ..................................................
EX889655       --> ..................................................

               301    -    351
UN21622        --> AGCCAACAACCTCGAGTTACTTCTTCTTCTGGAAAATCTATGGACGAAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW719655       <-- AGCCAACAACCTCGAGTTACTTCTTCTTCTGGAAAATCTATGGACGAAAA  Raphanus sativus var. oleiformis
EV573675       <-- AGCCAACAACCTCGAATTACTTCTTCTTCTGGAAAATCTATGGACGAAAA  Raphanus raphanistrum subsp. landra
EV530578       <-- AGCCAACAACCTCGAATTACTTCTTCTTCTGGAAAATCTATGGACGAAAA  Raphanus raphanistrum subsp. maritimus
FD943373       <-- AGCCAACAACCTCGAGTTACTTCTTCTTCTGGAAAATCTATGGACGAAAA  Raphanus sativus cv Early Scarlet Globe
EY918323       <-- AGCCAACAACCTCGAATTACTTCTTTTTCTGGAAAATCTATGGACGAAAA  Raphanus raphanistrum subsp. landra
EV546869       <-- AGCCAACAACCTCGAATTACTTCTTTTTTTGGAAAATCTATGGACGAAAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EW718380       <-- AGCCAACAACCTCGAGTTACTTTTTTTTTTGGAAAATTTATGGACGAAAA  Raphanus sativus var. oleiformis
EW718640       <-- AGCCAACAACCTCGAGTTACTTTTTTTTTTGGAAAATCTATGGACGAAAA  Raphanus sativus var. oleiformis
EW721388       <-- AGCCAACAACCTCGAGTTACTTTTTTTTCTGGAAAATCTATGGACGAAAA  Raphanus sativus var. oleiformis
EW714539       --> AGCCAACAACCTCGAGTTACTTCTTCTTCTGGAAAATCTATGGACGAAAA  Raphanus sativus var. oleiformis
EW716952       --> AGCCAACAACCTCGAGTTACTTCTTCTTCTGGAAAATCTATGGACGAAAA  Raphanus sativus var. oleiformis
FD989713       --> AGCCAACGACCTCGAATTACTTCTTCTTCTGGAAAATCTATGGACGAAAA  Raphanus raphanistrum subsp. landra
EW713564       --> AGCCAACAACCTCGAGTTACTTCTTCTTCTGGAAAATCTATGGACGAAAA  Raphanus sativus var. oleiformis
EX898235       --> AGCCAACAACCTCGAGTTACTTCTTCTTCTGGAAAATCTATGGACGAAAA  Raphanus sativus cv Early Scarlet Globe
EV569082       --> AGCCAACAACCTCGAATTACTTCTTCTTCTGGAAAATCTATGGACGAAAA  Raphanus raphanistrum subsp. landra
EY922348       --> AGCCAACAACCTCGAATTACTTCTTCTTCTGGAAAATCTATGGACGAAAA  Raphanus raphanistrum subsp. landra
EV551836       --> AGCCAACAACCTCGAATTACTTCTTCTTCTGGAAAATCTATGGACGAAAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV525980       --> AGCCAACAACCTCGAATTACTTCTTCTTCTGGAAAATCTATGGACGAAAA  Raphanus raphanistrum subsp. maritimus
FD947420       --> AGCCAACAACCTCGAGTTACTTCTTCTTCTGGAAAATCTATGGACGAAAA  Raphanus sativus cv Early Scarlet Globe
EW713563       --> ..................................................  Raphanus sativus var. oleiformis
EX889655       --> ..................................................  Raphanus sativus var. oleiformis

               351    -    401
UN21622        --> GAAGAGGTTAGGTGACGAAGAAGAGGAGAAAGCTCTATCGAAATATCTAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW719655       <-- GAAGAGGTTAGGTGACGAAGAAGAGGAGAAAGCTCTATCGAAATATCTAT
EV573675       <-- GAAGAGGTTAGGTGACGAAGAAGAGGAGAAAGCTCTATCGAAA-ATCTAT
EV530578       <-- GAAGAGGTTAGGTGACGAAGAAGAGGAGAAAGCTCTATCGAAATATCTAT
FD943373       <-- GAAGAGGTTAGGTGACGAAGAAGAGGAGAAAGCTCTATCGAAATATCTAT
EY918323       <-- GAAGAGGTTAGGTGACGAAGAAGAGGAGAAAGCTCTATCGAAATATCTAT
EV546869       <-- GAAGAGGTTAGGTGACGAAGAAGAGGAGAAAGCTCTATCGAAATATCTAT
EW718380       <-- GAAGAGGTTAGGTGACGAAGAAGAGGAGAAAGCTCTATCGAAATATCTAT
EW718640       <-- GAAGAGGTTAGGTGACGAAGAAGAGGAGAAAGCTCTATCGAAATATCTAT
EW721388       <-- GAAGAGGTTAGGTGACGAAGAAGAGGAGAAAGCTCTATCGAAATATCTAT
EW714539       --> GAAGAGGTTAGGTGACGAAGAAGAGGAGAAAGCTCTATCGAAATATCTAT
EW716952       --> GAAGAGGTTAGGTGACGAAGAAGAGGAGAAAGCTCTATCGAAATATCTAT
FD989713       --> GAAGAGGTTAGGTGACGAAGGAGAGGAGAAAGCTCTATCGAAATATCTAT
EW713564       --> GAAGAGGTTAGGTGACGAAGAAGAGGAGAAAGCTCTATCGAAATATCTAT
EX898235       --> GAAGAGGTTAGGTGACGAAGAAGAGGAGAAAGCTCTATCGAAATATCTAT
EV569082       --> GAAGAGGTTAGGTGACGAAGAAGAGGAGAAAGCTCTATCGAAA-ATCTAT
EY922348       --> GAAGAGGTTAGGTGACGAAGAAGAGGAGAAAGCTCTATCGAAATATCTAT
EV551836       --> GAAGAGGTTAGGTGACGAAGAAGAGGAGAAAGCTCTATCGAAATATCTAT
EV525980       --> GAAGAGGTTAGGTGACGAAGAAGAGGAGAAAGCTCTATCGAAATATCTAT
FD947420       --> GAAGAGGTTAGGTGACGAAGAAGAGGAGAAAGCTCTATCGAAATATCTAT
EW713563       --> ..................................................
EX889655       --> ..................................................

               401    -    451
UN21622        --> CGATGGATTATCCAAGGTTTAGAA-GAAGACGGCCAGTTCACAACAAGTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW719655       <-- CGATGGATTATCCAAGGTTTAGAA-GAAGACGGCCAGTTCACAACAAGTC
EV573675       <-- CGATGGATTATCCAAGGTTTAGAA-GAAGACGGCCAGTTCACAGCAAGTC
EV530578       <-- CGATGGATTATCCAAGGTTTAGAA-GAAGACGGCCAGTTCACAACAAGTC
FD943373       <-- CGATGGATTATCCAAGGTTTAGAA-GAAGACGGCCAGTTCACAACAAGTC
EY918323       <-- CGATGGATTATCCAAGGTTTAGAA-GAAGACGGCCAGTTCACAACAAGTC
EV546869       <-- CGATGGATTATCCAAGGTTTAGAA-GAAGACGGCCAGTTCACAACAAGTT
EW718380       <-- CGATGGATTATCCAAGGTTTAGAA-GAAGACGGCCAGTTCACAACAAGTC
EW718640       <-- CGATGGATTATCCAAGGTTTAGAA-GAAGACGGCCAGTTCACAACAAGTC
EW721388       <-- CGATGGATTATCCAAGGTTTAGAA-GAAGACGGCCAGTTCACAACAAGTC
EW714539       --> CGATGGATTATCCAAGGT................................
EW716952       --> CGATGGATTATCCAAGGTTTAGAA-GAAGACGGCCAGTTCACAACAAGTC
FD989713       --> CGATGGATTATCCAAGGTT...............................
EW713564       --> CGATGGATTATCCAAGGTTTAGAA-GAAGACGGCCAGTTCACAACAAGTC
EX898235       --> CGATGGATTATCCAAGG.................................
EV569082       --> CGATGGATTATCCAAGGT................................
EY922348       --> CGATGGATTATCCAAGGTTTAGAAAGAAGACGGCCAGTTCACAACAAGTC
EV551836       --> CGATGGATTATCCAAGG.................................
EV525980       --> CGATGGATTATCCAAGGT................................
FD947420       --> CGATGGATTATCCAAGGTTTAGAA-GAAGACGG.................
EW713563       --> ..................................................
EX889655       --> ..................................................

               451    -    501
UN21622        --> TCTACGTCCATGATATTTTTTTTTTTAATTTCAATACAACTATTAATTTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW719655       <-- TCTACGTCCATGATATTTTTTTTTTTA-TTTCAATACAACTATTAATTTA  Raphanus sativus var. oleiformis
EV573675       <-- TCTACGTCCAT----GATTTTTTTCTAATTTCAATACAACTATTAATTTA  Raphanus raphanistrum subsp. landra
EV530578       <-- TCTACGTCCATGA--TTTTTTTTTTTAATTTCAATACAACTATTAATTTA  Raphanus raphanistrum subsp. maritimus
FD943373       <-- TCTACGTCCATGATATTTTTTTTTTTTATTTCAATACAACTATTAATTTA  Raphanus sativus cv Early Scarlet Globe
EY918323       <-- TCTACGTCCATGA--TTTTTTTTTTTAACTTCAATACAACTATTAATTTA  Raphanus raphanistrum subsp. landra
EV546869       <-- TTTACGTCCATGAT-TTTTTTTTTTTAATTTCAATACAACTATTAATTTA  Raphanus raphanistrum subsp. raphanistrum (NY)
EW718380       <-- TTTACGTCCATGATATTTTTTTTTTTA-TTTCAATACAACTATTAATTTA  Raphanus sativus var. oleiformis
EW718640       <-- TTTACGTCCATGATATTTTTTTTTTTA-TTTCAATACAACTATTAATTTA  Raphanus sativus var. oleiformis
EW721388       <-- TTTACGTCCATGATATTTTTTTTTTTA-TTTCAATACAACTATTAATTTA  Raphanus sativus var. oleiformis
EW714539       --> ..................................................  Raphanus sativus var. oleiformis
EW716952       --> TCTACGTCCATGATATTTTTTTTTTTA-TTTCAATACAACTATTAATTTA  Raphanus sativus var. oleiformis
FD989713       --> ..................................................  Raphanus raphanistrum subsp. landra
EW713564       --> TCTACGTCCATGATATTTTTTTTTTTA-TTTCAATACAACTATTAATTTA  Raphanus sativus var. oleiformis
EX898235       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EV569082       --> ..................................................  Raphanus raphanistrum subsp. landra
EY922348       --> TCTACGTCCATGAT--TTTTTTTTTTAACTTCAATACAACTATTAATTTA  Raphanus raphanistrum subsp. landra
EV551836       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV525980       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD947420       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EW713563       --> ...........................ATTTCAATACAACTATTAATTTA  Raphanus sativus var. oleiformis
EX889655       --> ...............................CAATACAACTATTAATTTA  Raphanus sativus var. oleiformis

               501    -    551
UN21622        --> AGCTATAGATTTATCAATTAACTGGCTAAGTGGTTGGTATAAGAAGTTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW719655       <-- AGCTATAGATTTATCAATTAACTGGCTAAGTGGTTGGTATAAGAAGTTTT
EV573675       <-- AGCTATAGATTTATCAATTAACTGGCTAAGTGGTTGGTATAAGAAGTTTT
EV530578       <-- AGCTATAGATTTATCAATTAACTGGCTAAGTGGTTGGTATAAGAAGTTTT
FD943373       <-- AGCTATAGATTTATCAATTAACTGGCTAAGTGGTTGGTATAAGAAGTTTT
EY918323       <-- AGCTATAGATTTATCAATTAACTGGCTAAGTGGTTGGTATAAGAAGTTTT
EV546869       <-- AGCTATAGATTTATCAATTAACTGGCTAAGTGGTTGGTATAAGAAGTTTT
EW718380       <-- AGCTATAGATTTATCAATTAACTGGCTAAGTGGTTGGTATAAGAAGTTTT
EW718640       <-- AGCTATAGATTTATCAATTAACTGGCTAAGTGGTTGGTATAAGAAGTTTT
EW721388       <-- AGCTATAGATTTATCAATTAACTGGCTAAGTAGTTGGTATAAGAAGTTTT
EW714539       --> ..................................................
EW716952       --> AGCTATAGATTTATCAATTAACTGGCTAAGTAGTTGGTATAAGAAGTTTT
FD989713       --> ..................................................
EW713564       --> AGCTATAGATTTATCAATTAACTGGCTAAGTGGTTGGTATAAGAAGTTTT
EX898235       --> ..................................................
EV569082       --> ..................................................
EY922348       --> AGCTATAGATTTATCAATTAACTGGCTAAGTGGTTGGTATAAGAAGTTTT
EV551836       --> ..................................................
EV525980       --> ..................................................
FD947420       --> ..................................................
EW713563       --> AGCTATAGATTTATCAATTAACTGGCTAAGTGGTTGGTATAAGAAGTTTT
EX889655       --> AGCTATAGATTTATCAATTAACTGGCTAAGTGGTTGGTATAAGAAGTTTT

               551    -    601
UN21622        --> GGCGATATTATTGTAATTAAGGGACTATGTTCATGTTAATTCTTTTTATT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW719655       <-- GGCGATATTATTGTAATTAAGGGACTATGTTCATGTTAATTCTTTTTATT
EV573675       <-- GGCGATATT-TTGTAATTAAGGGACTATGTTCATGTTAATTCTTTTTATT
EV530578       <-- GGCGATATT-TTGTAATTAAGGGACTATGTTCATGTTAATTCTTTTTATT
FD943373       <-- GGCGATATTATTGTAATTAAGGGACTATGTTC..................
EY918323       <-- GGCGATATTttg......................................
EV546869       <-- GGCGATATT-TTGTAATTAAGGGACTATGTTCATGTTAATTCTTTTTATT
EW718380       <-- GGCGATATTATTGTAATTAAGGGACTATGTTCATGTTAATTCTTTTTATT
EW718640       <-- GGGGATATTATTGTAATTAAGGGACTATGTTCATGTTAATTCTTTTTATT
EW721388       <-- GGCGATATTATTGTAATTAAGGGACTATGTTCATGTTAATTCTTTTTATT
EW714539       --> ..................................................
EW716952       --> GGCGATATTATTGTAATTAAGGGACTATGTTCATGTTAATTCTTTTTATT
FD989713       --> ..................................................
EW713564       --> GGCGATATTATTGTAATTAAGGGACTATGTTCATGTTAATTCTTTTTATT
EX898235       --> ..................................................
EV569082       --> ..................................................
EY922348       --> GGCGATATTttg......................................
EV551836       --> ..................................................
EV525980       --> ..................................................
FD947420       --> ..................................................
EW713563       --> GGCGATATTATTGTAATTAAGGGACTATGTTCATGTTAATTCTTTTTATT
EX889655       --> GGCGATATTATTGTAATTAAGGGACTATGTTCATGTTAATTCTTTTTATT

               601    -    651
UN21622        --> TGATGATAGTGGCCGACAAGATTTAAGCAAAACCCTAAGTCTCTGGTTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW719655       <-- TGATGATAGTGGCCGACAAGATTTAAGCAAAACCCTAAGTCTCTGGTTTG
EV573675       <-- TTATGATAGTGGCCGACAAGATTTAAGC......................
EV530578       <-- TTATGATAGTGGCCGAC.................................
FD943373       <-- ..................................................
EY918323       <-- ..................................................
EV546869       <-- TTATGATAGTGGCCGACAAGATTTAAGCAAAACCCTAAGTCTCTGGTTTG
EW718380       <-- TGATGATAGTGGCCGACAAGATTTAAGCAAAACCCTAAGTTTTTGGTTTG
EW718640       <-- TGATGATAGTGGCCGACAAGATTTAAGCAAAACCCTAAGTCTCT......
EW721388       <-- TGATGATAGTGGCCGACAAGATTTAAGC......................
EW714539       --> ..................................................
EW716952       --> TGATGATAGTGGCCGACAAGATTTAAGC......................
FD989713       --> ..................................................
EW713564       --> TGATGATAGTGGCCGACAAGATTTAAGCAAAACCCTAAGTCTCTGGTTTG
EX898235       --> ..................................................
EV569082       --> ..................................................
EY922348       --> ..................................................
EV551836       --> ..................................................
EV525980       --> ..................................................
FD947420       --> ..................................................
EW713563       --> TGATGATAGTGGCCGACAAGATTTAAGCAAAACCCTAAGTCTCTGGTTTG
EX889655       --> TGATGATAGTGGCCGACAAGATTTAAGCAAAACCCTAAGTCTCTGGTTTG

               651    -    701
UN21622        --> GGGTTTGAGCTTATCTGATCTTCGTTTCATGCACTAACATGTTGGCTGGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW719655       <-- GGGTTTGAGCTTATCTGATCTTCGTTTCATGCACTAACATGTTGGCTGGT
EV573675       <-- ..................................................
EV530578       <-- ..................................................
FD943373       <-- ..................................................
EY918323       <-- ..................................................
EV546869       <-- GGGTTTGAGCTTATCTGATCTTCGTTTCATGCACTAACATGTTGGCTGGT
EW718380       <-- GGGTTTGAGCTTATTTGATTTTCGTTTCATGCACTAACATGTTGGCTGGT
EW718640       <-- ..................................................
EW721388       <-- ..................................................
EW714539       --> ..................................................
EW716952       --> ..................................................
FD989713       --> ..................................................
EW713564       --> GGGTTTGAGCTTATCTGATCTTCGTTTCATGCACTAACATGTTGGCTGGT
EX898235       --> ..................................................
EV569082       --> ..................................................
EY922348       --> ..................................................
EV551836       --> ..................................................
EV525980       --> ..................................................
FD947420       --> ..................................................
EW713563       --> GGGTTTGAGCTTATCTGATCTTCGTTTCATGCACTAACATGTTGGCTGGT
EX889655       --> GGGTTTGAGCTTATCTGATCTTCGTTTCATGCACTAACATGTTGGCTGGT

               701    -    751
UN21622        --> TTGGTTGTATTTTTTAATTTTATATTGCGAGAGGAAATCGATGTTTGAGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW719655       <-- TTGGTTGTATTTTTTAATTTTATATTGCGAGAGGAAATCGATGTTTGAGT
EV573675       <-- ..................................................
EV530578       <-- ..................................................
FD943373       <-- ..................................................
EY918323       <-- ..................................................
EV546869       <-- TTGGTTGTACTTTTTAATTTTATATTGCGAGAGGAAATCGATGTTTGAGT
EW718380       <-- TTGGTTGTATTTTTTAATTTTATATTGCGAGAGGAAATCGATGTTTGAGT
EW718640       <-- ..................................................
EW721388       <-- ..................................................
EW714539       --> ..................................................
EW716952       --> ..................................................
FD989713       --> ..................................................
EW713564       --> TTGGTTGTATTTTTTAATTTTATATTGCGAGAGGAAATCGATGTTTGAGT
EX898235       --> ..................................................
EV569082       --> ..................................................
EY922348       --> ..................................................
EV551836       --> ..................................................
EV525980       --> ..................................................
FD947420       --> ..................................................
EW713563       --> TTGGTTGTATTTTTTAATTTTATATTGCGAGAGGAAATCGATGTTTGAGT
EX889655       --> TTGGTTGTATTTTTTAATTTTATATTGCGAGAGGAAATCGATGTTTGAGT

               751    -    801
UN21622        --> TCCATTATTAACCGAGATAATTACATGTATGATTTGATCTAAAATAAGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW719655       <-- TCCATTATTAACCTAGATAATT............................
EV573675       <-- ..................................................
EV530578       <-- ..................................................
FD943373       <-- ..................................................
EY918323       <-- ..................................................
EV546869       <-- TCCATTATTAACCGAGATAATTACATGTATGATTTGATCTAAAATAAGAA
EW718380       <-- TCCATTATTAACCGA...................................
EW718640       <-- ..................................................
EW721388       <-- ..................................................
EW714539       --> ..................................................
EW716952       --> ..................................................
FD989713       --> ..................................................
EW713564       --> TCCATTATTAACCGA...................................
EX898235       --> ..................................................
EV569082       --> ..................................................
EY922348       --> ..................................................
EV551836       --> ..................................................
EV525980       --> ..................................................
FD947420       --> ..................................................
EW713563       --> T.................................................
EX889655       --> TCCATTATTAACCGAGATAATTACATGTATGATTTGATCT..........

               801    -    851
UN21622        --> AACAGAAAACG
                   ~~~~~~~~~~~
EW719655       <-- ...........
EV573675       <-- ...........
EV530578       <-- ...........
FD943373       <-- ...........
EY918323       <-- ...........
EV546869       <-- AACAGAAAACG
EW718380       <-- ...........
EW718640       <-- ...........
EW721388       <-- ...........
EW714539       --> ...........
EW716952       --> ...........
FD989713       --> ...........
EW713564       --> ...........
EX898235       --> ...........
EV569082       --> ...........
EY922348       --> ...........
EV551836       --> ...........
EV525980       --> ...........
FD947420       --> ...........
EW713563       --> ...........
EX889655       --> ...........