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Alignment for radish unigene UN21659

               1      -     51
UN21659        --> CATAATATATAGTAATTCCATAGCATAGCCAGATTGTACTATTGTAAACC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV550733       <-- ..................................................
FY439615       <-- ..................................................
EV551166       <-- ..................................................
EV537698       <-- ..................................................
FD979368       <-- ..................................................
FY449127       <-- ..................................................
FY453570       <-- ..................................................
EV538615       <-- ..................................................
EV548983       <-- ..................................................
FY429164       <-- ..................................................
FY438847       <-- ..................................................
FY449259       <-- ..................................................
FY447983       <-- ..................................................
EW723416       <-- ..................................................
FD543233       <-- ..................................................
FY450904       <-- ..................................................
EW734607       <-- ..................................................
FD969935       <-- ..................................................
FD540384       <-- ..................................................
EX888720       <-- ..................................................
FD559434       <-- ..................................................
FD534454       <-- ..................................................
EW726271       <-- ..................................................
EX906352       <-- ..................................................
EY949287       <-- ..................................................
FD946808       <-- ..................................................
FD963281       <-- ..................................................
FD972255       <-- ..................................................
FY429626       --> CATAATATATAGTAATTCCATAGCATAGCCAGATTGTACTATTGTAAACC
EV541880       --> ..........gGTAATCCCATAACATAGCCAGATTGTACTATTGTAAACC
FD959634       --> .................aCATAGCATAGCCAGATTGTACTATTGTAAACC
EV542583       --> ...................................GTACTATTGTAAACC
FY429433       --> .........................................attgAAACC
FD968172       --> ..................................................
FY437201       --> ..................................................
FD536899       --> ..................................................
EW738427       --> ..................................................
EX767033       --> ..................................................
EV572590       --> ..................................................
FY446258       --> ..................................................

               51     -    101
UN21659        --> TTTTCAAATTAACAATAAATTTTATGCATCAATGAAACCCAACTAAGAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV550733       <-- ................................TGAAACCCAACTAAGAGA
FY439615       <-- ................................TGAAACCCAACTAAGAGA
EV551166       <-- ..................................................
EV537698       <-- ..................................................
FD979368       <-- ..................................................
FY449127       <-- ..................................................
FY453570       <-- ..................................................
EV538615       <-- ..................................................
EV548983       <-- ..................................................
FY429164       <-- ..................................................
FY438847       <-- ..................................................
FY449259       <-- ..................................................
FY447983       <-- ..................................................
EW723416       <-- ..................................................
FD543233       <-- ..................................................
FY450904       <-- ..................................................
EW734607       <-- ..................................................
FD969935       <-- ..................................................
FD540384       <-- ..................................................
EX888720       <-- ..................................................
FD559434       <-- ..................................................
FD534454       <-- ..................................................
EW726271       <-- ..................................................
EX906352       <-- ..................................................
EY949287       <-- ..................................................
FD946808       <-- ..................................................
FD963281       <-- ..................................................
FD972255       <-- ..................................................
FY429626       --> TTTTCAAATTAACAATAAATTTTATGCATCAATGAAACCCAACTAAGAGA
EV541880       --> TTTTCAAATTAACAATAAATTTTATGCATCAATGAAACCCAACTAAGAGA
FD959634       --> TTTTCAAATTAACAATAAATTTTATGCATCAATGAAACCCAACTAAGAGA
EV542583       --> TTTTCAAATTAACAATAAATTTTATGCATCAATGAAACCCAATTAAGAGA
FY429433       --> TTTTCAA-TTAACAATAAATTTTATGCATCAATGAAACCCAACTAAGAGA
FD968172       --> ................................TGAAACCCAATTAAGAGA
FY437201       --> ................................TGAAACCCAACTAAGAGA
FD536899       --> ..................................................
EW738427       --> ..................................................
EX767033       --> ..................................................
EV572590       --> ..................................................
FY446258       --> ..................................................

               101    -    151
UN21659        --> CTAAATGCAACTTATGGTTTTTTTAATATATACACAATACCCAGAAGCTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV550733       <-- CTAAATGCAACTTATGGTTTTTTTAATATATACACAATACCCAGAAGCTG
FY439615       <-- CTAAATGCAACTTATGGTTTTTTTAATATATACACAATACCCAGAAGCTG
EV551166       <-- ..................................................
EV537698       <-- ..................................................
FD979368       <-- ..................................................
FY449127       <-- ..................................................
FY453570       <-- ..................................................
EV538615       <-- ..................................................
EV548983       <-- ..................................................
FY429164       <-- ..................................................
FY438847       <-- ..................................................
FY449259       <-- ..................................................
FY447983       <-- ..................................................
EW723416       <-- ..................................................
FD543233       <-- ..................................................
FY450904       <-- ..................................................
EW734607       <-- ..................................................
FD969935       <-- ..................................................
FD540384       <-- ..................................................
EX888720       <-- ..................................................
FD559434       <-- ..................................................
FD534454       <-- ..................................................
EW726271       <-- ..................................................
EX906352       <-- ..................................................
EY949287       <-- ..................................................
FD946808       <-- ..................................................
FD963281       <-- ..................................................
FD972255       <-- ..................................................
FY429626       --> CTAAATGCAACTTATGGTTTTTTTAATATATACACAATACCCAGAAGCTG
EV541880       --> CTAAATGCAACTTATGGTTTTTTTAATATATACACAATACCCAGAAGCTG
FD959634       --> CTAAATGCAACTTATGGTTTTTTTAATATATACACAATACCCAGAAGCTG
EV542583       --> CTAAATGCAACTTATGGTTTTTT-AATATATACACAATACCCAGAAGCCG
FY429433       --> CTAAATGCAACTTATGGTTTTTTTAATATATACACAATACCCAGAAGCTG
FD968172       --> CTAAATGCAACTTATGGTTTTTTTAATATATACACAATACCCAGAAGCTG
FY437201       --> CTAAATGCAACTTATGGTTTTTTTAATATATACACAATACCCAGAAGCTG
FD536899       --> .................................................G
EW738427       --> ..................................................
EX767033       --> ..................................................
EV572590       --> ..................................................
FY446258       --> ..................................................

               151    -    201
UN21659        --> CATTTTTATGTATCTTATGTCATAAACAACAACATACAATCATTTGACAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV550733       <-- CATTTTTATGTATCTTATGTCATAAACAACAACATACAATCATTTGACAA
FY439615       <-- CATTTTTATGTATCTTATGTCATAAACAACAACATACAATCATTTGACAA
EV551166       <-- ..................................................
EV537698       <-- ..................................................
FD979368       <-- ..................................................
FY449127       <-- ..................................................
FY453570       <-- ..................................................
EV538615       <-- ..................................................
EV548983       <-- ..................................................
FY429164       <-- ..................................................
FY438847       <-- ..................................................
FY449259       <-- ..................................................
FY447983       <-- ..................................................
EW723416       <-- ..................................................
FD543233       <-- ..................................................
FY450904       <-- ..................................................
EW734607       <-- ..................................................
FD969935       <-- ..................................................
FD540384       <-- ..................................................
EX888720       <-- ..................................................
FD559434       <-- ..................................................
FD534454       <-- ..................................................
EW726271       <-- ..................................................
EX906352       <-- ..................................................
EY949287       <-- ..................................................
FD946808       <-- ..................................................
FD963281       <-- ..................................................
FD972255       <-- ..................................................
FY429626       --> CATTTTTATGTATCTTATGTCATAAACAACAACATACAATCATTTGACAA
EV541880       --> CATTTTTATGTATCTTATGTCATAAACAACAACATACAATCATTTGACAA
FD959634       --> CATTTTTATGTATCTTATGTCATAAACAACAACATACAATCATTTGACAA
EV542583       --> CATTTTTATGTATCTTATGTCATAAACAACAACATACAATCATTTGACAA
FY429433       --> CATTTTTATGTATCTTATGTCATAAACAACAACATACAATCATTTGACAA
FD968172       --> CATTTTTATGTATCTTATGTCATAAACAACAACATACAATCATTTGACAA
FY437201       --> CATTTTTATGTATCTTATGTCATAAACAACAACATACAATCATTTGACAA
FD536899       --> CATTTTTATGTATCTTATGTCATAAACAACAACATACAATCATTTGACAA
EW738427       --> .......ATGTATCTTATGTCATAAACAACAACATACAATCATTTGACAA
EX767033       --> .......ATGTATCTTATGTCATAAACAACAACATACAATCATTTGACAA
EV572590       --> ..................................................
FY446258       --> ..................................................

               201    -    251
UN21659        --> ATCTCTACAGAGATCACTTTGCTCATATGAGTCAGAATCCTCTCTGAAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV550733       <-- ATCTCTACAGAGATCACTTTGCTCATATGAGTCAGAATCCTCTCTGAAGA
FY439615       <-- ATCTCTACAGAGATCACTTTGCTCATATGAGTCAGAATCCTCTCTGAAGA
EV551166       <-- ..................................................
EV537698       <-- ..................................................
FD979368       <-- ..................................................
FY449127       <-- ..................................................
FY453570       <-- ..................................................
EV538615       <-- ..................................................
EV548983       <-- ..................................................
FY429164       <-- ..................................................
FY438847       <-- ..................................................
FY449259       <-- ..................................................
FY447983       <-- ..................................................
EW723416       <-- ..................................................
FD543233       <-- ..................................................
FY450904       <-- ..................................................
EW734607       <-- ..................................................
FD969935       <-- ..................................................
FD540384       <-- ..................................................
EX888720       <-- ..................................................
FD559434       <-- ..................................................
FD534454       <-- ..................................................
EW726271       <-- ..................................................
EX906352       <-- ..................................................
EY949287       <-- ..................................................
FD946808       <-- ..................................................
FD963281       <-- ..................................................
FD972255       <-- ..................................................
FY429626       --> ATCTCTACAGAGATCACTTTGCTCATATGAGTCAGAATCCTCTCTGAAGA
EV541880       --> ATCTCTACAGAGATCACTTTGCTCATATGAGTCAGAATCCTCTCTGAAGA
FD959634       --> ATCTCTACAGAGATCACTTTGCTCATATGAGTCAAAATCCTCTCTGAAGA
EV542583       --> ATCTCTACAGAGATCACTTTGCTCATATGAGTCAGAATCCTCTCTGAAGA
FY429433       --> ATCTCTACAGAGATCACTTTGCTCATATGAGTCAGAATCCTCTCTGAAGA
FD968172       --> ATCTCTACAGAGATCACTTTGCTCATATGAGTCAAAATCCTCTCTGAAAA
FY437201       --> ATCTCTACAGAGATCACTTTGCTCATATGAGTCAGAATCCTCTCTGAAGA
FD536899       --> ATCTCTACAGAGATCACTTTGCTCATATGAGTCAGAATCCTCTCTGAAGA
EW738427       --> ATCTCTACAGAGATCACTTTGCTCATATGAGTCAGAATCCTCTCTGAAGA
EX767033       --> ATCTCTACAGAGATCACTTTGCTCATATGAGTCAGAATCCTCTCTGAAGA
EV572590       --> ..................................................
FY446258       --> ..................................................

               251    -    301
UN21659        --> AACAAATGTGCAGTGTCACCATCTTCTTACGCAATGTTCTTCCTGCTCTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV550733       <-- AACAAATGTGCAGTGTCACCATCTTCTTACGCAATGTTCTTCCTGCTCTG
FY439615       <-- AACAAATGTGCAGTGTCACCATCTTCTTACGCAATGTTCTTCCTGCTCTG
EV551166       <-- ..................................................
EV537698       <-- ..................................................
FD979368       <-- ..................................................
FY449127       <-- ..................................................
FY453570       <-- ..................................................
EV538615       <-- ..................................................
EV548983       <-- ..................................................
FY429164       <-- ..................................................
FY438847       <-- ..................................................
FY449259       <-- ..................................................
FY447983       <-- ..................................................
EW723416       <-- ..................................................
FD543233       <-- ..................................................
FY450904       <-- ..................................................
EW734607       <-- ..................................................
FD969935       <-- ..................................................
FD540384       <-- ..................................................
EX888720       <-- ..................................................
FD559434       <-- ..................................................
FD534454       <-- ..................................................
EW726271       <-- ..................................................
EX906352       <-- ..................................................
EY949287       <-- ..................................................
FD946808       <-- ..................................................
FD963281       <-- ..................................................
FD972255       <-- ..................................................
FY429626       --> AACAAATGTGCAGTGTCACCATCTTCTTACGCAATGTTCTTCCTGCTCTG
EV541880       --> AACAAATGTGCAGTGTCACCATCTTCTTACGCAATGTTCTTCCTGCTCTG
FD959634       --> AACAAATGTGCAGTGTCACCATCTTCTTACGCAATGTTCTTCCTGCTCTG
EV542583       --> AACAAATGTGCAGTGTCACCATCTTCTTACGCAATGTTCTTCCTGCTCTG
FY429433       --> AACAAATGTGCAGTGTCACCATCTTCTTACGCAATGTTCTTCCTGCTCTG
FD968172       --> AACAAATGTGCAGTGTCACCATCTTCTTACGCAATGTTCTTCCTGCTCTG
FY437201       --> AACAAATGTGCAGTGTCACCATCTTCTTACGCAATGTTCTTCCTGCTCTG
FD536899       --> AACAAATGTGCAGTGTCACCATCTTCTTACGCAATGTTCTTCCTGCTCTG
EW738427       --> AACAAATGTGCAGTGTCACCATCTTCTTACGCAATGTTCTTCCTGCTCTG
EX767033       --> AACAAATGTGCAGTGTCACCATCTTCTTACGCAATGTTCTTCCTGCTCTG
EV572590       --> ..................................................
FY446258       --> ..................................................

               301    -    351
UN21659        --> CGACCAGAATGGTGTTGCGGGCTTGCGCTTCATGGCCTTGATACTAAACG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV550733       <-- CGACCAGAATGGTGTTGCGGGCTTGCGCTTCATGGCCTTGATACTAAACG
FY439615       <-- CGACCAGAATGGTGTTGCGGGCTTGCGCTTCATGGCCTTGATACTAAACG
EV551166       <-- .......................TGCGCTTTACGGCCTTGATACTAAACG
EV537698       <-- ........................................ATACTAAACG
FD979368       <-- ..................................................
FY449127       <-- ..................................................
FY453570       <-- ..................................................
EV538615       <-- ..................................................
EV548983       <-- ..................................................
FY429164       <-- ..................................................
FY438847       <-- ..................................................
FY449259       <-- ..................................................
FY447983       <-- ..................................................
EW723416       <-- ..................................................
FD543233       <-- ..................................................
FY450904       <-- ..................................................
EW734607       <-- ..................................................
FD969935       <-- ..................................................
FD540384       <-- ..................................................
EX888720       <-- ..................................................
FD559434       <-- ..................................................
FD534454       <-- ..................................................
EW726271       <-- ..................................................
EX906352       <-- ..................................................
EY949287       <-- ..................................................
FD946808       <-- ..................................................
FD963281       <-- ..................................................
FD972255       <-- ..................................................
FY429626       --> CGACCAGAATGGTGTTGCGGGCTTGCGCTTCATGGCCTTGATACTAAACG
EV541880       --> CGACCAGAATGGTGTTGCGGGCCTGCGCTTCATGGCCTTGATACTAAACG
FD959634       --> CGACCAGAATGGTGTTGCGGGCTTGCGCTTCATGGCCTTGATACTAAACG
EV542583       --> CGACCAGAATGGTGTTGCGGGCTTGCGCTTTATGGCCTTGATACTAAACG
FY429433       --> CGACCAGAATGGTGTTGCGGGCTTGCGCTTCATGGCCTTGATACTAAACG
FD968172       --> CGACCAGAATGGTGTTGCGGGCTTGCGCTTTATGGCCTTGATACTAAACG
FY437201       --> CGACCAGAATGGTGTTGCGGGCTTGCGCTTCATGGCCTTGATACTAAACG
FD536899       --> CGACCAGAATGGTGTTGCGGGCTTGCGCTTTATGGCCTTGATACTAAACG
EW738427       --> CGACCAGAATGGTGTTGCGGGCTTGCGCTTCATGGCCTTGATACTAAACG
EX767033       --> CGACCAGAATGGTGTTGCGGGCTTGCGCTTCATGGCCTTGATACTAAACG
EV572590       --> ..................................................
FY446258       --> ..................................................

               351    -    401
UN21659        --> GACTGTTCTTGCTCATTAAACAAGTTCCCTGATCAAGGTCACAAACGGGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV550733       <-- GACTGTTCTTGCTCATTAAACAAGTTCCCTGATCAAGGTCACAAACGGGG
FY439615       <-- GACTGTTCTTGCTCATTAAACAAGTTCCCTGATCAAGGTCACAAACGGGG
EV551166       <-- GACTGTTCTTGCTCATTAAACAAGTTCCCTGATCGAGGTCACAAACGGGG
EV537698       <-- GACTGTTCTTGCTCATTAAACAAGTTCCCTGATCAAGGTCACAAACGGGG
FD979368       <-- ..................................................
FY449127       <-- ..................................................
FY453570       <-- ..................................................
EV538615       <-- ..................................................
EV548983       <-- ..................................................
FY429164       <-- ..................................................
FY438847       <-- ..................................................
FY449259       <-- ..................................................
FY447983       <-- ..................................................
EW723416       <-- ..................................................
FD543233       <-- ..................................................
FY450904       <-- ..................................................
EW734607       <-- ..................................................
FD969935       <-- ..................................................
FD540384       <-- ..................................................
EX888720       <-- ..................................................
FD559434       <-- ..................................................
FD534454       <-- ..................................................
EW726271       <-- ..................................................
EX906352       <-- ..................................................
EY949287       <-- ..................................................
FD946808       <-- ..................................................
FD963281       <-- ..................................................
FD972255       <-- ..................................................
FY429626       --> GACTGTTCTTGCTCATTAAACAAGTTCCCTGATCAAGGTCACAAACGGGG
EV541880       --> GACTGTTCTTGCTCATTAAACAAGTTCCCTGATCAAGGTCACAAACGGGG
FD959634       --> GACTGTTCTTGCTCATTAAACAAGTTCCCTGATCAAGGTCACAAACGGGG
EV542583       --> GACTGTTCTTGCTCATTAAACAAGTTCCCTGATCAAGGTCACAAACGGGG
FY429433       --> GACTGTTCTTGCTCATTAAACAAGTTCCCTGATCAAGGTCACAAACGGGG
FD968172       --> GACTGTTCTTGCTCATTAAACAAGTTCCCTGATCAAGGTCACAAACGGGG
FY437201       --> GACTGTTCTTGCTCATTAAACAAGTTCCCTGATCAAGGTCACAAACGGGG
FD536899       --> GACTGTTCTTGCTCATTAAACAAGTTCCCTGATCAAGGTCACAAACGGGG
EW738427       --> GACTGTTCTTGCTCACTAAACAAGTTCCCTGATCAAGGTCACAAACGGGG
EX767033       --> GACTGTCCTTGCTCATTAAACAAGTTCCCTGATCAAGGTCACAAACGGGG
EV572590       --> ..................................................
FY446258       --> ..................................................

               401    -    451
UN21659        --> TACTCGTGAGGGCAGCAACTATAGTTGTCATCACAACATGTGGCTGCTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV550733       <-- TACTCGTGAGGGCAGCAACTATAGTTGTCATCACAACATGTGGCTGCTTC
FY439615       <-- TACTCGTGAGGGCAGCAACTATAGTTGTCATCACAACATGTGGCTGCTTC
EV551166       <-- TACTCGTAAGGGCAGCAACTATAGTTGTCATCACAACATGTGGCTGCTTC
EV537698       <-- TACTCGTGAGGGCAGCAACTATAGTTGTCATCACAACATGTGGCTGCTTC
FD979368       <-- ..................................................
FY449127       <-- ..................................................
FY453570       <-- ..................................................
EV538615       <-- ..................................................
EV548983       <-- ..................................................
FY429164       <-- ..................................................
FY438847       <-- ..................................................
FY449259       <-- ..................................................
FY447983       <-- ..................................................
EW723416       <-- ..................................................
FD543233       <-- ..................................................
FY450904       <-- ..................................................
EW734607       <-- ..................................................
FD969935       <-- ..................................................
FD540384       <-- ..................................................
EX888720       <-- ..................................................
FD559434       <-- ..................................................
FD534454       <-- ..................................................
EW726271       <-- ..................................................
EX906352       <-- ..................................................
EY949287       <-- ..................................................
FD946808       <-- ..................................................
FD963281       <-- ..................................................
FD972255       <-- ..................................................
FY429626       --> TACTCGTGAGGGCAGCAACTATAGTTGTCATCACAACATGTGGCTGCTTC
EV541880       --> TACTCGTGAGGGCAGCAACTATAGTTGTCATCACAACATGTGGCTGCTTC
FD959634       --> TACTCGTGAGGGCAGCAACTATAGTTGTCATCACAGCATGTGGCTGCTTC
EV542583       --> TACTCGTGAGGGCAGCAACTATAGTTGTCATCACAACATGTGGCTGCTTC
FY429433       --> TACTCGTGAGGGCAGCAACTATAGTTGTCATCACAACATGTGGCTGCTTC
FD968172       --> TACTCGTGAGGGCAGCAACTATAGTTGTCATCACAACATGTGGCTGCTTC
FY437201       --> TACTCGTGAGGGCAGCAACTATAGTTGTCATCACAACATGTGGCTGCTTC
FD536899       --> TACTCGTGAGGGCAGCAACTATAGTTGTCATCACAACATGTGGCTGCTTC
EW738427       --> TACTCGTGAGGGCAGCAACTATAGTTGTCATCACAACATGTGGCTGCTTC
EX767033       --> TACTCGTGAGGGCAGCAACTATAGTTGTCATCACAACATGTGGCTGCTTC
EV572590       --> ..................................................
FY446258       --> ..................................................

               451    -    501
UN21659        --> TAGTGGGCAACATCCCCAAGCAAGGCAATACTTGCCATAATCAAAGAGAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV550733       <-- TAGTGGGCAACATCCCCAAGCAAGGCAATACTTGCCATAATCAAAGAGAC
FY439615       <-- TAGTGGGCAACATCCCCAAGCAAGGCAATACTTGCCATAATCAAAGAGAC
EV551166       <-- TAGTGGGCAACATCCCCAAGCAAGGCAATACTTGCCATAATCAAAAAGAC
EV537698       <-- TAGTGGGCAACATCCCCAAGCAAGGCAATACTTGCCATAATCAAAGAGAC
FD979368       <-- ...........................ATACTTGCCATAATCAAAAAGAC
FY449127       <-- ..................................................
FY453570       <-- ..................................................
EV538615       <-- ..................................................
EV548983       <-- ..................................................
FY429164       <-- ..................................................
FY438847       <-- ..................................................
FY449259       <-- ..................................................
FY447983       <-- ..................................................
EW723416       <-- ..................................................
FD543233       <-- ..................................................
FY450904       <-- ..................................................
EW734607       <-- ..................................................
FD969935       <-- ..................................................
FD540384       <-- ..................................................
EX888720       <-- ..................................................
FD559434       <-- ..................................................
FD534454       <-- ..................................................
EW726271       <-- ..................................................
EX906352       <-- ..................................................
EY949287       <-- ..................................................
FD946808       <-- ..................................................
FD963281       <-- ..................................................
FD972255       <-- ..................................................
FY429626       --> TAGTGGGCAACATCCCCAAGCAAGGCAATACTTGCCATAATCAAAGAGAC
EV541880       --> TAGTGGGCAACATCCCCAAGCAAGGCAATACTTGCCATAATCAAAGAGAC
FD959634       --> TAGTGGGCAACATCCCCAAGCAAGGCAATACTTGCCATAATCAAAGAGAC
EV542583       --> TAGTGGGCAACATCCCCAAGCAAGGCAATACTTGCCATAATCAAAAAGAC
FY429433       --> TAGTGGGCAACATCCCCAAGCAAGGCAATACTTGCCATAATCAAAGAGAC
FD968172       --> TAGTGGGCAACATCCCCAAGCAAGGCAATACTTGCCATAATCAAAAAAAC
FY437201       --> TAGTGGGCAACATCCCCAAGCAAGGCAATACTTGCCATAATCAAAGAGAC
FD536899       --> TAGTGGGCAGCATCCCCAAGCAAGGCAATACTTGCCATAATCAAAAAGGC
EW738427       --> TAGTGGGCAACATCCCCAAGCAAGGCAATACTTGCCATAATCAAAGAGAC
EX767033       --> TAGTGGGCAACATCCCCAAGCAAGGCAATACTTGCCATAATCAAAGAGAC
EV572590       --> ..................................................
FY446258       --> ..................................................

               501    -    551
UN21659        --> AACAACAGGTGTTGCTCTCAGGACATGTGTAGTAACTGTCACATTGGGTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV550733       <-- AACAACAGGTGTTGCTCTCAGGACATGTGTAGTAACTGTCACATTGGGTC
FY439615       <-- AACAACAGGTGTTGCTCTCAGGACATGTGTAGTAACTGTCACATTGGGTC
EV551166       <-- AACAACAAGTGTTGCTCTCAGGACATGTGTAGTAACTGTCACATTGGGTC
EV537698       <-- AACAACAGGTGTTGCTCTCAGGACATGTGTAGTAACTGTCACATTGGGTC
FD979368       <-- AACAACAAGTGTTGCTCTCAGGACATGTGTAGTAACTGTCACATTGGGTC
FY449127       <-- .........TGTTGCTCTCAGGACATGTGTAGTAACTGTCACATTGGGTC
FY453570       <-- ..................CAGGACATGTGTAGTAACTGTCACATTGGGTC
EV538615       <-- ..................................................
EV548983       <-- ..................................................
FY429164       <-- ..................................................
FY438847       <-- ..................................................
FY449259       <-- ..................................................
FY447983       <-- ..................................................
EW723416       <-- ..................................................
FD543233       <-- ..................................................
FY450904       <-- ..................................................
EW734607       <-- ..................................................
FD969935       <-- ..................................................
FD540384       <-- ..................................................
EX888720       <-- ..................................................
FD559434       <-- ..................................................
FD534454       <-- ..................................................
EW726271       <-- ..................................................
EX906352       <-- ..................................................
EY949287       <-- ..................................................
FD946808       <-- ..................................................
FD963281       <-- ..................................................
FD972255       <-- ..................................................
FY429626       --> AACAACAGGTGTTGCTCTCAGGACATGTGTAGTAACTGTCACATTGGGTC
EV541880       --> AACAACAGGTGTTGCTCTCAGGACATGTGTAGTAACTGTCACATTGGGTC
FD959634       --> AACAACAGGTGTTGCTCTCAGGACATGTGTAGTAACTGTCACATTGGGTC
EV542583       --> AACAACAAGTGTTGCTCTCAGGACATGTGTAGTAACTGTCAAATTGGGTC
FY429433       --> AACAACAGGTGTTGCTCTCAGGACATGTGTAGTAACTGTCACATTGGGTC
FD968172       --> AACAACAAGTGTTGCTCTCAGGACATGTGTAGTAACTGTCACATTGGGTC
FY437201       --> AACAACAGGTGTTGCTCTCAGGACATGTGTAGTAACTGTCACATTGGGTC
FD536899       --> AACAACAAGTGTTGCTCTCAGGACATGTGTAGTAACTGTCACATTGGGTC
EW738427       --> AACAACAGGTGTTGCTCTCAGGACATGTGTAGTAACTGTCACATTGGGTC
EX767033       --> AACAACAGGTGTTGCTCTCAGGACATGTGTAGTAACTGTCACATTGGGTC
EV572590       --> ..................................................
FY446258       --> ..................................................

               551    -    601
UN21659        --> GGAGGCGTGACGGGAGATGGAGGTGAAGGTCCAGGGTTTGGTGGGTTTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV550733       <-- GGAGGCGTGACGGGAGATGGAGGTGAAGGTCCAGGGTTTGGTGGGTTTTG
FY439615       <-- GGAGGCGTGACGGGAGATGGAGGTGAAGGTCCAGGGTTTGGTGGGTTTTG
EV551166       <-- GGAGGCGTGACGGGAGATGGAGGTGAAGGTCCAGGGTTTGGTGGGTTTTG
EV537698       <-- GGAGGCGTGACGGGAGATGGAGGTGAAGGTCCAGGGTTTGGTGGGTTTTG
FD979368       <-- GGAGGCGTGACGGGAGATGGAGGTGAAGGTCCAGGGTTTGGTGGGTTTTG
FY449127       <-- GGAGGCGTGACGGGAGATGGAGGTGAAGGTCCAGGGTTTGGTGGGTTTTG
FY453570       <-- GGAGGCGTGACGGGAGATGGAGGTGAAGGTCCAGGGTTTGGTGGGTTTTG
EV538615       <-- ..................................................
EV548983       <-- ..................................................
FY429164       <-- ..................................................
FY438847       <-- ..................................................
FY449259       <-- ..................................................
FY447983       <-- ..................................................
EW723416       <-- ..................................................
FD543233       <-- ..................................................
FY450904       <-- ..................................................
EW734607       <-- ..................................................
FD969935       <-- ..................................................
FD540384       <-- ..................................................
EX888720       <-- ..................................................
FD559434       <-- ..................................................
FD534454       <-- ..................................................
EW726271       <-- ..................................................
EX906352       <-- ..................................................
EY949287       <-- ..................................................
FD946808       <-- ..................................................
FD963281       <-- ..................................................
FD972255       <-- ..................................................
FY429626       --> GGAGGCGTGACGGGAGATGGAGGTGAAGGTCCAGGGTTTGGTGGGTTTTG
EV541880       --> GGAAGCGTGACGGGAGATGGAGGTGAAGGTCCAGGGTTTGGTGGGTTTTG
FD959634       --> GGAGGCGTGACGGGAGATGGAGGTGAAGGTCCAGGGTTTGGTGGGTTTTG
EV542583       --> GGAGGCGTGACGGGAGATGGAGGTGAAGGTCCAGGGTTTGGTGGGTTTTG
FY429433       --> GGAGGCGTGACGGGAGATGGAGGTGAAGGTCCAGGGTTTGGTGGGTTTTG
FD968172       --> GGAGGCGTGACGGGAGATGGAGGTGAAGGTCCAGGGTTTGGTGGGTTTTG
FY437201       --> GGAGGCGTGACGGGAGATGGAGGTGAAGGTCCAGGGTTTGGTGGGTTTTG
FD536899       --> GGAAGCGTGACGGGAGATGGAGGTGAAGGTCCAGGGTTTGGTGGGTTTTG
EW738427       --> GGAGGCGTGACGGGAGATGGAGGTGAAGGTCCAGGGTTTGGTGGGTTTTG
EX767033       --> GGAAGCGTGACGGGAGATGGAGGTGAAGGTCCAGGGTTTGGTGAGTTTTG
EV572590       --> ..................................................
FY446258       --> ..................................................

               601    -    651
UN21659        --> GCCGTTCTTGATCGGATATGAAGGCTCAACAGC-GATTCCACATTTTCCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV550733       <-- GCCGTTCTTGATCGGATATGAAGGCTCAACAGC-GATTCCACATTTT...
FY439615       <-- GCCGTTCTTGATCGGATATGAAGGCTCAACAGC-GATTCCACATTTTCCT
EV551166       <-- GCCGTTCTTGATCGGATATGAAGGCTCAACAGC-AATTCCACATTTTCCT
EV537698       <-- GCCGTTCTTGATCGGATATGAAGGCTCAACAGC-GATTCCACATTTTCCT
FD979368       <-- GCCGTTCTTGATCGGATATGAAGGCTCAACAGCAAATTCCACATTTTCCT
FY449127       <-- GCCGTTCTTGATCGGATATGAAGGCTCAACAGC-GATTCCACATTTTCCT
FY453570       <-- GCCGTTCTTGATCGGATATGAAGGCTCAACAGC-GATTCCACATTTTCCT
EV538615       <-- ..................................................
EV548983       <-- ..................................................
FY429164       <-- ..................................................
FY438847       <-- ..................................................
FY449259       <-- ..................................................
FY447983       <-- ..................................................
EW723416       <-- ..................................................
FD543233       <-- ..................................................
FY450904       <-- ..................................................
EW734607       <-- ..................................................
FD969935       <-- ..................................................
FD540384       <-- ..................................................
EX888720       <-- ..................................................
FD559434       <-- ..................................................
FD534454       <-- ..................................................
EW726271       <-- ..................................................
EX906352       <-- ..................................................
EY949287       <-- ..................................................
FD946808       <-- ..................................................
FD963281       <-- ..................................................
FD972255       <-- ..................................................
FY429626       --> GCCGTTCTTGATCGGATATGAAGGCTCAACAGC-GATTCCACATTTTCCT
EV541880       --> GCCGTTCTTGATCGGATATGAAGGCTCAACAGC-GATTCCACATTTTCCT
FD959634       --> GCCGTTCTTGATCGGATATGAAGGCTCGACAGC-GATTCCACATTTTCCT
EV542583       --> GCCGTTCTTGATCGGATATGAAGGCTCAACAGC-GATTCCACATTTTCCT
FY429433       --> GCCGTTCTTGATCGGATATGAAGGCTCAACAGC-GATTCCACATTTTCCT
FD968172       --> GCCGTTCTTGATCGGATATGAAGGCTCAACAGC-AATTCCACATTTTCCT
FY437201       --> GCCGTTCTTGATCGGATATGAAGGCTCAACAGC-GATTCCACATTTTCCT
FD536899       --> GCCGTTCTTGATCGGATATGAAGGCTCAACAacaatt.............
EW738427       --> GCCGTTCTTGATCGGATATGAAGGCTCAACAGC-GATTCCACATTTTCCT
EX767033       --> GCCGTTCTTGATCGGATATGAAGGCTCAACAGC-GATTCCACATTTTCCT
EV572590       --> ...............................................CCT
FY446258       --> ..................................................

               651    -    701
UN21659        --> GCTGAAGACGCAATGTTACGCTCCATCCTTATGTATCCGCTCTCTCCCCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV550733       <-- ..................................................
FY439615       <-- GCTGAAGACGCAATGTTACGCTCCATCCTTATGTATCCGCTCTCTCCCCA
EV551166       <-- GCTGAAGACGCAATGTTACGTTCCATCCTTATGTATCCGCTCTCTCCCCA
EV537698       <-- GCTGAAGACGCAATGTTACGCTCCATCCTTATGTATCCGCTCTCTCCCCA
FD979368       <-- GCTGAAGACGCAATGTTACGTTCCATCCTTATGTATTCGCTCTC---TCA
FY449127       <-- GCTGAAGACGCAATGTTACGCTCCATCCTTATGTATCCGCTCTCTCCCCA
FY453570       <-- GCTGAAGACGCAATGTTACGCTCCATCCTTATGTATCCGCTCTCTCCCCA
EV538615       <-- ...............................TGTATCCGCTCTCTCCCCA
EV548983       <-- ...............................TGTATCCGCTCTCTCCCCA
FY429164       <-- ..................................................
FY438847       <-- ..................................................
FY449259       <-- ..................................................
FY447983       <-- ..................................................
EW723416       <-- ..................................................
FD543233       <-- ..................................................
FY450904       <-- ..................................................
EW734607       <-- ..................................................
FD969935       <-- ..................................................
FD540384       <-- ..................................................
EX888720       <-- ..................................................
FD559434       <-- ..................................................
FD534454       <-- ..................................................
EW726271       <-- ..................................................
EX906352       <-- ..................................................
EY949287       <-- ..................................................
FD946808       <-- ..................................................
FD963281       <-- ..................................................
FD972255       <-- ..................................................
FY429626       --> GCTGAAGACGCAATGTTACGCTCCATCCTTATGTATCCGCTCTCTCCCCA
EV541880       --> GCTGAAGACGCAATGTTACGCTCCATCCTTATGTATCCGCTCTCTCCCCA
FD959634       --> GCTGAAGACGCAATGTTACGCTCCATCCTTATGTATCCGATCTCTCCCCA
EV542583       --> GCTGAAGACGCAATGTTACGCTCCATCCTTATGTATCCGCTCTCTCCCCA
FY429433       --> GCTGAAGACGCAATGTTACGCTCCATCCTTATGTATCCGCTCTCTCCCCA
FD968172       --> GCTGAAGACGCAATGTTACGCTCCATTCTTATGTATCCGCTCTCTCCCCA
FY437201       --> GCTGAAGACGCAATGTTACGCTCCATCCTTATGTATCCGCTCTCTCCCCA
FD536899       --> ..................................................
EW738427       --> GCTGAAGACGCAATGTTACGCTCCATCCTTATGTATCCGCCCTCTCCCCA
EX767033       --> GCTGAAGACGCAATGTTACGCTCCATCCTTATGTATCCGCTCTCTCCCCA
EV572590       --> GCTGAAGACGCAATGTTACGCTCCATCCTTATGTATCCGCTCTCTCCCCA
FY446258       --> ..................................................

               701    -    751
UN21659        --> GCTTGTTCCCCATGAGTTTTTCACAATCCAATAGTCTTTGCCGCTCTCTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV550733       <-- ..................................................
FY439615       <-- GCTTGTTCCCCATGAGTTTTTCACAATCCAATAGTCTTTGCCGCTCTCTG
EV551166       <-- GCTTGTTCCCCATGAGTTTTTCACAATCCAATAGTCTTTGCCGCTCTCTG
EV537698       <-- GCTTGTTCCCCATGAGTTTTTCACAATCCAATAGTCTTTGCCGTTCTCTG
FD979368       <-- GCTTGTTCCCCATGAGTTTTTCACAATCCAATAGTCTTTGCCGCTCTCTG
FY449127       <-- GCTTGTTCCCCATGAGTTTTTCACAATCCAATAGTCTTTGCCGCTCTCTG
FY453570       <-- GCTTGTTCCCCATGAGTTTTTCACAATCCAATAGTCTTTGCCGCTCTCTG
EV538615       <-- GCTTGTTCCCCATGAGTTTTTCACAATCCAATAGTCTTTGCCGCTCTCTG
EV548983       <-- GCTTGTTCCCCATGAGTTTTTCACAATCCAATAGTCTTTGCCGCTCTCTG
FY429164       <-- ..................................................
FY438847       <-- ..................................................
FY449259       <-- ..................................................
FY447983       <-- ..................................................
EW723416       <-- ..................................................
FD543233       <-- ..................................................
FY450904       <-- ..................................................
EW734607       <-- ..................................................
FD969935       <-- ..................................................
FD540384       <-- ..................................................
EX888720       <-- ..................................................
FD559434       <-- ..................................................
FD534454       <-- ..................................................
EW726271       <-- ..................................................
EX906352       <-- ..................................................
EY949287       <-- ..................................................
FD946808       <-- ..................................................
FD963281       <-- ..................................................
FD972255       <-- ..................................................
FY429626       --> GCTTGTTCCCCATGAGTTTTTCACAATCCAATAGTCTTTGCCGCTCTCTG
EV541880       --> GCTTGTTCCCCATGAGTTTTTCACAATCCAATAGTCTTTGCCGTTCTCTG
FD959634       --> GCTTGTTCCCCATGAGTTTTTCACAATC......................
EV542583       --> GCTTGTTCCCCATGAGTTTTTCACAATCCAATAGTCTTTGCCGCTCTCTG
FY429433       --> GCTTGTTCCCCATGAGTTTTTCACAATCCAATAGTCTTTGCCGCTCTCTG
FD968172       --> GCTTGTTCCCCATGAGTTTTTCACAATCCAATAGTCTTTGCCGCTCTCTG
FY437201       --> GCTTGTTCCCCATGAGTTTTTCACAATCCAATAGTCTTTGCCGCTCTCTG
FD536899       --> ..................................................
EW738427       --> GCTTGTTCCCCATGAGTTTTTCACAATCCAATAGTCTTTGCCGCTCTCTG
EX767033       --> GCTTGTTCCCCATGAGTTTTTCACAATCCAATAGTCTTTGCCGCTCTCTG
EV572590       --> GCTTGTTCCCCATGAGTTTTTCACAATCCAATAGTCTTTGCCGCTCTCTG
FY446258       --> ..................................................

               751    -    801
UN21659        --> TTCCGTACCCGACCGCCAAAACTCCGTGGTCTAGATCTGTTCCACAAATT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV550733       <-- ..................................................
FY439615       <-- TTCCGTACCCGACCGCCAAAACTCCGTGGTCTAGATCTGTTCCACAAATT
EV551166       <-- TTCCGTATCCGACCGCCAAAACTCCGTGGTCTAGATCTGCTCCACAAATT
EV537698       <-- TTCCGTATCCGACCGCCAAAACTCCGTGGTCTAGATCTGTTCCACAAATT
FD979368       <-- TTCCGTATCCGACCGCCAAAACTCCGTGGTCTAGATCTGTTCCACAAATT
FY449127       <-- TTCCGTACCCGACCGCCAAAACTCCGTGGTCTAGATCTGTTCCACAAATT
FY453570       <-- TTCCGTACCCGACCGCCAAAACTCCGTGGTCTAGATCTGTTCCACAAATT
EV538615       <-- TTCCGTACCCGACCGCCAAAACTCCGTGGTCTAGATCTGTTCCACAAATT
EV548983       <-- TTCCGTATCCGACCGCCAAAACTCCGTGGTCTAGATTTGTTCCACAAATT
FY429164       <-- ...........................................ACAAATT
FY438847       <-- ..................................................
FY449259       <-- ..................................................
FY447983       <-- ..................................................
EW723416       <-- ..................................................
FD543233       <-- ..................................................
FY450904       <-- ..................................................
EW734607       <-- ..................................................
FD969935       <-- ..................................................
FD540384       <-- ..................................................
EX888720       <-- ..................................................
FD559434       <-- ..................................................
FD534454       <-- ..................................................
EW726271       <-- ..................................................
EX906352       <-- ..................................................
EY949287       <-- ..................................................
FD946808       <-- ..................................................
FD963281       <-- ..................................................
FD972255       <-- ..................................................
FY429626       --> TTCCGTACCCGACCGCCAAAACTCCGTGGTCTAGATCTGTTCCACAA-TT
EV541880       --> TTCCGTATCCGACCGCCAAAACTCCGTGGTCTAGATCTGTTCCACAAATT
FD959634       --> ..................................................
EV542583       --> TTCCGTACCCGACCGCCAAAACTCCGTGGTCTAGATCTGTTCCACAAATT
FY429433       --> TTCCGTACCCGACCGCCAAAACTCCGTGGTCTAGATCTGTTCCACAAATT
FD968172       --> TTCCGTATCCGACCGCCAAAACTCCGTGGTCTAGATCTGTTCCACAAATT
FY437201       --> TTCCGTACCCGACCGCCAAAACTCCGTGGTCTAGATCTGTTCCACAAATT
FD536899       --> ..................................................
EW738427       --> TTCCGTACCCGACCGCCAAAACTCCGTGGTCTAGATCTGTTCCACAAATT
EX767033       --> TTCCGTACCCGACCGCCAAAACTCCGTGGTCTAGATCTGTTCCACAAATT
EV572590       --> TTCCGTACCCGACCGCCAAAACTCCGTGGTCTAGATCTGTTCCACAAATT
FY446258       --> ..................................................

               801    -    851
UN21659        --> CCATCGAATATACCAGAATCATAGAGCTGGAACGCACGACCACCACCCTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV550733       <-- ..................................................
FY439615       <-- CCATCGAATATACCAGAATCATAGAGCTGGAACGCACGACCACCACCCTC
EV551166       <-- CCATCGAATATACCAGAATCATAGAGCTGGAACGCACGACCACCACCCTC
EV537698       <-- CCATCGAATATCCCAGAATCATAGAGCTGGAACGCACGACCACCACCCTC
FD979368       <-- CCGTCGAATATACCAGAATCATAGAGCTGGAACGCACGACCACCACCCTC
FY449127       <-- CCATCGAATATACCAGAATCATAGAGCTGGAACGCACGACCACCACCCTC
FY453570       <-- CCATCGAATATACCAGAATCATAGAGCTGGAACGCACGACCACCACCCTC
EV538615       <-- CCATCGAATATCCCAGAATCATAGAGCTGGAACGCACGACCACCACCCTC
EV548983       <-- CCGTCGAATATACCAGAATCATAGAGCTGGAACGCACGACCACCACCCTC
FY429164       <-- CCATCGAATATACCAGAATCATAGAGCTGGAACGCACGACCACCACCCTC
FY438847       <-- ..ATCGAATATACCAGAATCATAGAGCTGGAACGCACGACCACCACCCTC
FY449259       <-- .................ATCATAGAGCTGGAACGCACGACCACCACCCTC
FY447983       <-- ..................................................
EW723416       <-- ..................................................
FD543233       <-- ..................................................
FY450904       <-- ..................................................
EW734607       <-- ..................................................
FD969935       <-- ..................................................
FD540384       <-- ..................................................
EX888720       <-- ..................................................
FD559434       <-- ..................................................
FD534454       <-- ..................................................
EW726271       <-- ..................................................
EX906352       <-- ..................................................
EY949287       <-- ..................................................
FD946808       <-- ..................................................
FD963281       <-- ..................................................
FD972255       <-- ..................................................
FY429626       --> CCATCGAATATACCAGAATCATAGAGCTGGAACGCACGACCACCACCCTC
EV541880       --> CCAT..............................................
FD959634       --> ..................................................
EV542583       --> CCATCGAATATCCCAGAATCATAGAGCTGGAACGCACGACCACCACCCTC
FY429433       --> CCATCGAATATACCAGAATCATAGAGCTGGAACGCACGACCACCACCCT.
FD968172       --> CCATCGAATATACCAGAATCATAGAGCTGGAACGCACGACCACCACCCTC
FY437201       --> CCATCGAATATACCAGAATCATAGAGCTGGAACGCACGAC..........
FD536899       --> ..................................................
EW738427       --> CCATCGAATATACCAGAATCATAGAGCTGGAACGCACGACCACCGCCCTC
EX767033       --> TCATC.............................................
EV572590       --> CCATCGAATATACCAGAATCATAGAGCTGGAACGCACGACCACCACCCTC
FY446258       --> ..................................................

               851    -    901
UN21659        --> AATGGCCACGCTGATTGGTTGGTGAGAAAGTGCTTTCTTCAAGGACTCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV550733       <-- ..................................................
FY439615       <-- AATGGCCACGCTGATTGGTTGGTGAGAAAGTGCTTTCTTCAAGGACTCTT
EV551166       <-- AATGGCCACGCTGATTGGTTGGTGAGAAAGTGCTTTCTTCAAGGACTCTT
EV537698       <-- AATGGCCACGCTGATTGGTTGGTGAGAAAGTGCTTTCTTCAAGGACTCTT
FD979368       <-- AATGGCCACGCTGATTGGTTGGTGAGAAAGTGCTTTCTTCAAGGACTCTT
FY449127       <-- AATGGCCACGCTGATTGGTTGGTGAGAAAGTGCTTTCTTCAAGGACTCTT
FY453570       <-- AATGGCCACGCTGATTGGTTGGTGAGAAAGTGCTTTCTTCAAGGACTCTT
EV538615       <-- AATTGCCACGCTGATTGGTTGGTGAGAAAGTGCTTTCTTCAAGGACTCTT
EV548983       <-- AATGGCCACGCTAATTGGTTGGTGAGGAAGTGCTTTCTTCAAGGACTCTT
FY429164       <-- AATGGCCACGCTGATTGGTTGGTGAGAAAGTGCTTTCTTCAAGGACTCTT
FY438847       <-- AATGGCCACGCTGATTGGTTGGTGAGAAAGTGCTTTCTTCAAGGACTCTT
FY449259       <-- AATGGCCACGCTGATTGGTTGGTGAGAAAGTGCTTTCTTCAAGGACTCTT
FY447983       <-- ........................AGAAAGTGCTTTCTTCAAGGACTCTT
EW723416       <-- .........................GAAAGTGCTTTCTTCAACGACTCTT
FD543233       <-- ......................................TCAAG-ACTCTT
FY450904       <-- ..................................................
EW734607       <-- ..................................................
FD969935       <-- ..................................................
FD540384       <-- ..................................................
EX888720       <-- ..................................................
FD559434       <-- ..................................................
FD534454       <-- ..................................................
EW726271       <-- ..................................................
EX906352       <-- ..................................................
EY949287       <-- ..................................................
FD946808       <-- ..................................................
FD963281       <-- ..................................................
FD972255       <-- ..................................................
FY429626       --> AATGGCCACGCTGATTG.................................
EV541880       --> ..................................................
FD959634       --> ..................................................
EV542583       --> AATTGCCACGCTGATTGGTTGGTGAGAAAGTGCTTTCTTCAAG-ACTCTT
FY429433       --> ..................................................
FD968172       --> AATGGCCACGCTGATTGGTT..............................
FY437201       --> ..................................................
FD536899       --> ..................................................
EW738427       --> AATGGCCACGCTGATTGGTTGGTGAGAAAGTGCTTTCTT...........
EX767033       --> ..................................................
EV572590       --> AATGGCCACGCTGATTGGTTGGTGAGAAAGTGCTTTCTTCAAGGACTCTT
FY446258       --> ..................................................

               901    -    951
UN21659        --> CGCTGTTAGCCGG-CACATCCTCATA-TGAATCGATTGTAACAA-CTTTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV550733       <-- ..................................................
FY439615       <-- CGCTGTTAGCCGG-CACATCCTCATA-TGAATCGA...............
EV551166       <-- CGCTGTTAGCCGG-CACATCCTCATA-TGAATCGATTGTAACAA-CTTTc
EV537698       <-- CGCTGTTAGCCGG-CGCATCCTCGTA-TGAATCGATTGTAACAA-CTTTA
FD979368       <-- CGCTGTTAGTCGG-CACATCCTCATA-TGAATCGATTGTAACAAACTTTA
FY449127       <-- CGCTGTTAGCCGG-CACATCCTCATA-TGAATCGATTGTAACAA-CTTTA
FY453570       <-- CGCTGTTAGCCGG-CACATCCTCATA-TGAATCGATTGTAACAA-CTTTA
EV538615       <-- CGCTGTTAGCCGG-CACATCCTCATA-TGAATCGATTGTAACAA-CTTTA
EV548983       <-- CGCTGTTAGCCGG-CACATCCTCATA-TGAATCGATTGTAACAA-CTTTA
FY429164       <-- CGCTGTTAGCCGG-CACATCCTCATA-TGAATCGATTGTAACAA-CTTTA
FY438847       <-- CGCTGTTAGCCGG-CACATCCTCATA-TGAATCGATTGTAACAA-CTTTA
FY449259       <-- CGCTGTTAGCCGG-CACATCCTCATA-TGAATCGATTGTAACAA-CTTTA
FY447983       <-- CGCTGTTAGCCGG-CACATCCTCATA-TGAATCGATTGTAACAA-CTTTA
EW723416       <-- CGCTGTTAGCCGGGCACATCCTCATAATGAATCGATTGTAACAA-CTTTA
FD543233       <-- CGATGTTAGCCGG-CACATCCTCGTA-TGA-TCGAT-GTAACAA-CTTTA
FY450904       <-- ..................................................
EW734607       <-- ..................................................
FD969935       <-- ..................................................
FD540384       <-- ..................................................
EX888720       <-- ..................................................
FD559434       <-- ..................................................
FD534454       <-- ..................................................
EW726271       <-- ..................................................
EX906352       <-- ..................................................
EY949287       <-- ..................................................
FD946808       <-- ..................................................
FD963281       <-- ..................................................
FD972255       <-- ..................................................
FY429626       --> ..................................................
EV541880       --> ..................................................
FD959634       --> ..................................................
EV542583       --> CGCTGT............................................
FY429433       --> ..................................................
FD968172       --> ..................................................
FY437201       --> ..................................................
FD536899       --> ..................................................
EW738427       --> ..................................................
EX767033       --> ..................................................
EV572590       --> CGCTGTTAGCCGG-CACATCCTCATA-TGAATCGATTGTAACAA-CTTTA
FY446258       --> ..................................................

               951    -   1001
UN21659        --> GCGTTTTTTCTGGTCTGATCACAACGTCCGTCAACACCCTTGTAAGGGTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV550733       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FY439615       <-- ..................................................  Raphanus sativus cv GSK3-1
EV551166       <-- c.................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV537698       <-- GCGTTTTTTCTGGTCTGATCACAACGTCCG....................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD979368       <-- GCGTTTTTTCTGGTCTG.................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FY449127       <-- GCGTTTTTTCTAGTCTGATCACAACGTCCGTCAACACCCTTGTAAGGGTA  Raphanus sativus cv GSK3-1
FY453570       <-- GCGTTTTTTCTAGTCTGATCACAACGTCCGTCAACACCCTTGTAAGGGTA  Raphanus sativus cv GSK3-1
EV538615       <-- GCGTTTTTTCTGGTCTGATCACAACGTCCGTCAACACCCTTGTAAGGGTA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV548983       <-- GCGTTTTTTCTGGTCTGATCACAACGTCCGTCAACACCCTTGTAAGGGTA  Raphanus raphanistrum subsp. raphanistrum (NY)
FY429164       <-- GCGTTTTTTCTAGTCTGATCACAACGTCCGTCAACACCCTTGTAAGGGTA  Raphanus sativus cv GSK3-1
FY438847       <-- GCGTTTTTTCTAGTCTGATCACAACGTCCGTCAACACCCTTGTAAGGGTA  Raphanus sativus cv GSK3-1
FY449259       <-- GCGTTTTTTCTAGTCTGATCACAACGTCCGTCAACACCCTTGTAAGGGTA  Raphanus sativus cv GSK3-1
FY447983       <-- GCGTTTTTTCTAGTCTGATCACAACGTCCGTCAACACCCTTGTAAGGGTA  Raphanus sativus cv GSK3-1
EW723416       <-- GCGTTTTTTCTGGTCTGATCACAACGTCCGTCAACACC-TTGTAAGGGTA  Raphanus sativus cv Early Scarlet Globe
FD543233       <-- GCGTTTTT-CT-GTCTGATCACAACGTCCGTCAACACC-TTGTAAGGGTA  Raphanus raphanistrum subsp. raphanistrum (MS)
FY450904       <-- .........ctaggCTGATCACAACGTCCGTCAACACCCTTGTAAGGGTA  Raphanus sativus cv GSK3-1
EW734607       <-- ...............................CAACACCCT-GTAAGG-T-  Raphanus sativus cv Rat-Tail Radish #3870
FD969935       <-- ............................................AGGGTA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD540384       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX888720       <-- ..................................................  Raphanus sativus var. oleiformis
FD559434       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD534454       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EW726271       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EX906352       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY949287       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD946808       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD963281       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD972255       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FY429626       --> ..................................................  Raphanus sativus cv GSK3-1
EV541880       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD959634       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EV542583       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FY429433       --> ..................................................  Raphanus sativus cv GSK3-1
FD968172       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FY437201       --> ..................................................  Raphanus sativus cv GSK3-1
FD536899       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EW738427       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EX767033       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV572590       --> GCGTTTTTTCTGGTCTGATCACAACGTCCGTCAACACCCTTGTAAGGGTA  Raphanus raphanistrum subsp. landra
FY446258       --> ..................................................  Raphanus sativus cv GSK3-1

               1001   -   1051
UN21659        --> ATCTTCCTCTGTATCGATTCC-ACCGTTGTTGATAATGAAC-TCAAAAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV550733       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FY439615       <-- ..................................................  Raphanus sativus cv GSK3-1
EV551166       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV537698       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD979368       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FY449127       <-- ATCTTCCTCTGTATCGATTCC-ACCGTTGTTAATAATGAAC-TCAAAAGC  Raphanus sativus cv GSK3-1
FY453570       <-- ATCTTCCTCTGTATCGATTCC-ACCGTTGTTAATAATGAAC-TCAAAAGC  Raphanus sativus cv GSK3-1
EV538615       <-- ATCTTCCTCTGTATCGATTCC-ACCGTTGTTGATAATGAAC-TCAAAAGC  Raphanus raphanistrum subsp. raphanistrum (MS)
EV548983       <-- ATCTTCCTCTGTATCGATTCC-ACCGTTGTTGATAATGAAT-TCAAAAGC  Raphanus raphanistrum subsp. raphanistrum (NY)
FY429164       <-- ATCTTCCTCTGTATCGATTCC-ACCGTTGTTAATAATGAAC-TCAAAAGC  Raphanus sativus cv GSK3-1
FY438847       <-- ATCTTCCTCTGTATCGATTCC-ACCGTTGTTAATAATGAAC-TCAAAAGC  Raphanus sativus cv GSK3-1
FY449259       <-- ATCTTCCTCTGTATCGATTCC-ACCGTTGTTAATAATGAAC-TCAAAAGC  Raphanus sativus cv GSK3-1
FY447983       <-- ATCTTCCTCTGTATCGATTCC-ACCGTTGTTAATAATGAAC-TCAAAAGC  Raphanus sativus cv GSK3-1
EW723416       <-- ATCTTCCTCTGTATCGATTCC-ACCGTTGTTGATAATGAAC-TCAAAAGC  Raphanus sativus cv Early Scarlet Globe
FD543233       <-- -TCTTCCTCTGTATCGATTCC-ACCGTTGTTGATAATGAAC-TCAAAAGC  Raphanus raphanistrum subsp. raphanistrum (MS)
FY450904       <-- ATCTTCCTCTGTATCGATTCCCACCGTTGTTAATAATGAACCTCAAAAGC  Raphanus sativus cv GSK3-1
EW734607       <-- ATC-TCCTCTGTATCGAT-CC-ACCGTTGTTGATA-TGAA--TCAAAAGC  Raphanus sativus cv Rat-Tail Radish #3870
FD969935       <-- -TCTTC-TCTGTATCGATTCC-AC-GTTGTCGATAATGAAC-TCAAAAGC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD540384       <-- .TCTTCCTCTGTATCGATTCC-ACCGTTGTTGATAATGAAC-TCAAAAGC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX888720       <-- .......TCTGTATCGATTCC-ACCGTTGTTGATAATGAAC-TCAAAAGA  Raphanus sativus var. oleiformis
FD559434       <-- .........TGTATCGATTCC-ACCGTTGTTGATAATGAAC-TCAAAAGC  Raphanus raphanistrum subsp. landra
FD534454       <-- ..........GTATCGATTCC-ACCGTTGTTGATAATGAAT-TCAAAAGC  Raphanus raphanistrum subsp. maritimus
EW726271       <-- ............................GTTGATA-TG-AC-TCAAAAGC  Raphanus sativus cv Early Scarlet Globe
EX906352       <-- ............................................AAAAGC  Raphanus sativus cv Rat-Tail Radish #3870
EY949287       <-- ............................................AAAAGC  Raphanus sativus cv Rat-Tail Radish #3870
FD946808       <-- ............................................AAAAGC  Raphanus sativus cv Early Scarlet Globe
FD963281       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD972255       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FY429626       --> ..................................................  Raphanus sativus cv GSK3-1
EV541880       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD959634       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EV542583       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FY429433       --> ..................................................  Raphanus sativus cv GSK3-1
FD968172       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FY437201       --> ..................................................  Raphanus sativus cv GSK3-1
FD536899       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EW738427       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EX767033       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV572590       --> ATCTTCCTCTGTATCGATTCC-ACCGTTGTTGATAATGAAT-TCAAAAGC  Raphanus raphanistrum subsp. landra
FY446258       --> ..................................................  Raphanus sativus cv GSK3-1

               1051   -   1101
UN21659        --> ATAGTCCATGAGACCTCCGTTACAACCTTCATTGTATGAAGTGTCACAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV550733       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FY439615       <-- ..................................................  Raphanus sativus cv GSK3-1
EV551166       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV537698       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD979368       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FY449127       <-- ATAGTCCATGAGACCTCCGTTACAACCTTCATTGTATGAAGTGTCACAAT  Raphanus sativus cv GSK3-1
FY453570       <-- ATAGTCCATGAGACCTCCGTTACAACCTTCATTGTATGAAGTGTCACAAT  Raphanus sativus cv GSK3-1
EV538615       <-- ATAGTCCATGAGACCTCCGTTACAACCTTCATTGTATGAAGTGTCACAGT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV548983       <-- ATAGTCCATGAGACCTCCGTTACAACCTTCATTGTATGAAGTGTCACAAT  Raphanus raphanistrum subsp. raphanistrum (NY)
FY429164       <-- ATAGTCCATGAGACCTCCGTTACAACCTTCATTGTATGAAGTGTCACAAT  Raphanus sativus cv GSK3-1
FY438847       <-- ATAGTCCATGAGACCTCCGTTACAACCTTCATTGTATGAAGTGTCACAAT  Raphanus sativus cv GSK3-1
FY449259       <-- ATAGTCCATGAGACCTCCGTTACAACCTTCATTGTATGAAGTGTCACAAT  Raphanus sativus cv GSK3-1
FY447983       <-- ATAGTCCATGAGACCTCCGTTACAACCTTCATTGTATGAAGTGTCACAAT  Raphanus sativus cv GSK3-1
EW723416       <-- ATAGTCCATGAGACCTCCGTTACAACCTTCATTGTATGAAGTGTCACAAT  Raphanus sativus cv Early Scarlet Globe
FD543233       <-- ATAGTCCATGAGACCTCCGTTACAACTTTCATTGTATGAAGTGTCACAGT  Raphanus raphanistrum subsp. raphanistrum (MS)
FY450904       <-- ATAGTCCATGAGACCTCCGTTACAACCTTCATTGTATGAAGTGTCACAAT  Raphanus sativus cv GSK3-1
EW734607       <-- ATAGTCCATGAGACCTCCGTTACAACCTTCATTGTATGAAGTGTCACAGT  Raphanus sativus cv Rat-Tail Radish #3870
FD969935       <-- ATAGTCAATGAGAC-TCCGTTACAACTTTCATTGTATGAAGTGTCACAGT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD540384       <-- ATAGTCCATGAGAC-TCCGTTACAACTTTCATTGTATGAAGTGTCACAGT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX888720       <-- ATAGTCCATGAGACCTCCGTTACAACTTTCATTGTATGAAGTGTCACAAT  Raphanus sativus var. oleiformis
FD559434       <-- ATAGTCCATGAGACCTCCGTTACAACCTTCATTGTATGAAGTGTCACAGT  Raphanus raphanistrum subsp. landra
FD534454       <-- ATAGTCCATGAGACCTCCGTTACAACCTTCATTGTATGAAGTGTCACAGT  Raphanus raphanistrum subsp. maritimus
EW726271       <-- ATAGTCCATGAGAC-TCCGTTACAACCTTCATTGTATGAAGTGTCACAAT  Raphanus sativus cv Early Scarlet Globe
EX906352       <-- ATAGTCCATGAGAC-TCCGTTACAACTTTCATTGTATGAAGTGTCACAAT  Raphanus sativus cv Rat-Tail Radish #3870
EY949287       <-- ATAGTCCATGAGAC-TCCGTTACAACTTTCATTGTATGAAGTGTCACAAT  Raphanus sativus cv Rat-Tail Radish #3870
FD946808       <-- ATAGTCCATGAGAC-TCCGTTACAACTTTCATTGTATGAAGTGTCACAAT  Raphanus sativus cv Early Scarlet Globe
FD963281       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD972255       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FY429626       --> ..................................................  Raphanus sativus cv GSK3-1
EV541880       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD959634       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EV542583       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FY429433       --> ..................................................  Raphanus sativus cv GSK3-1
FD968172       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FY437201       --> ..................................................  Raphanus sativus cv GSK3-1
FD536899       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EW738427       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EX767033       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV572590       --> ATAGTCCATGAGACCTCCGTTACAACCTTCATTGTATGAAGTGTCACAGT  Raphanus raphanistrum subsp. landra
FY446258       --> ..................................................  Raphanus sativus cv GSK3-1

               1101   -   1151
UN21659        --> CGACCAATTCTTGTTCAGACAATGATATTAAGTCTCCGGTCACGACCTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV550733       <-- ..................................................
FY439615       <-- ..................................................
EV551166       <-- ..................................................
EV537698       <-- ..................................................
FD979368       <-- ..................................................
FY449127       <-- CGACCAATTCTTGTTCAGACAATGATATTAAGTCTCCGGTCACGACCTTG
FY453570       <-- CGACCAATTCTTGTTCAGACAATGATATTAAGTCTCCGGTCACGACCTTG
EV538615       <-- CGACCAATTCTTGTTCAGACAATGATATTAAGTCTCCGGTCACGACCTTG
EV548983       <-- CGACCAATTCTTGTTCAGACAATGATATTAAGTCTCCGGTCACGACCTTG
FY429164       <-- CGACCAATTCTTGTTCAGACAATGATATTAAGTCTCCGGTCACGACCTTG
FY438847       <-- CGACCAATTCTTGTTCAGACAATGATATTAAGTCTCCGGTCACGACCTTG
FY449259       <-- CGACCAATTCTTGTTCAGACAATGATATTAAGTCTCCGGTCACGACCTTG
FY447983       <-- CGACCAATTCTTGTTCAGACAATGATATTAAGTCTCCGGTCACGACCTTG
EW723416       <-- CGACCAATTCTTGTTCAGACAATGATATTAAGTCTCCGGTCACGACCTTG
FD543233       <-- CGACCAATTCTTGTTCAGACAATGATATTAAGTCTCCGGTCACGACCTTG
FY450904       <-- CGACCAATTCTTGTTCAGACAATGATATTAAGTCTCCGGTCACGACCTTG
EW734607       <-- CGACCAATTCTTGTTCAGATAATGATATTAAGTCTCCGGTCACGACCTTG
FD969935       <-- CGACCAATTCTTGTTCAGACAATGATATTAAGTCTCCGGTCACGACCTTG
FD540384       <-- CGACCAATTCTTGTTCAGACAATGATATTAAGTCTCCGGTCACGACCTTG
EX888720       <-- CGACCAATTCTTGTTCAGACAATGATATTAAGTCTCCGGTCACGACCTTG
FD559434       <-- CGACCAATTCTTGTTCAGACAATGATATTAAGTCTCCGGTCACGACCTTG
FD534454       <-- CGACCAATTCTTGTTCAGATAATGATATTAAGTCTCCGGTCACGACCTTG
EW726271       <-- CGACCAATTCTTGTTCAGACAATGATATTAAGTCTCCGGTCACGACCTTG
EX906352       <-- CGACCAATTCTTGTTCAGACAATGATATTAAGTCTCCGGTCACGACTTTG
EY949287       <-- CGACCAATTCTTGTTCAGACAATGATATTAAGTCTCCGGTCACGACCTTG
FD946808       <-- CAACCAATTCTTGTTCAGACAATGATATTAAGTCTCCGGTCACGACCTTG
FD963281       <-- ....CAATTCTAGTTCAGATAATGATATTAAGTCTCCGGTCACGACCTTG
FD972255       <-- ..................................................
FY429626       --> ..................................................
EV541880       --> ..................................................
FD959634       --> ..................................................
EV542583       --> ..................................................
FY429433       --> ..................................................
FD968172       --> ..................................................
FY437201       --> ..................................................
FD536899       --> ..................................................
EW738427       --> ..................................................
EX767033       --> ..................................................
EV572590       --> CGACCGATTCTTGTTCAGATAATGATATTAAGTCTCCGGTCACGACCTTG
FY446258       --> ..................................................

               1151   -   1201
UN21659        --> TTTATGCCCTCCACTGCTCCGATTGTTGAAAACGCCCAACAACTCCCGCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV550733       <-- ..................................................
FY439615       <-- ..................................................
EV551166       <-- ..................................................
EV537698       <-- ..................................................
FD979368       <-- ..................................................
FY449127       <-- TTTATGCCCTCCACTGCTCCGATTGTTGAAAACGCCCAACAACTCCCGCA
FY453570       <-- TTTATGCCCTCCACTGCTCCGATTGTTGAAAACGCCCAACAACTCCCGCA
EV538615       <-- TTTATGCCCTCCACTGCTCCGATGAAAAAAAACGCCCAACAACTCCCGCA
EV548983       <-- TTTATGCCCTCCACTGCTCCGATTGTTGAAAACGCCCAACAACTCCCGCA
FY429164       <-- TTTATGCCCTCCACTGCTCCGATTGTTGAAAACGCCCAACAACTCCCGCA
FY438847       <-- TTTATGCCCTCCACTGCTCCGATTGTTGAAAACGCCCAACAACTCCCGCA
FY449259       <-- TTTATGCCCTCCACTGCTCCGATTGTTGAAAACGCCCAACAACTCCCGCA
FY447983       <-- TTTATGCCCTCCACTGCTCCGATTGTTGAAAACGCCCAACAACTCCCGCA
EW723416       <-- TTTATGCCCTCCACTGCCCCGATTGTTGAAAACGCCCAACAACTCCCGCA
FD543233       <-- TTTATGCCCTCCACTGCTCCGATTGTTGAAAACGCCCAACAACTCCCGCA
FY450904       <-- TTTATGCCCTCCACTGCTCCGATTGTTGAAAACGCCCAACAACTCCCGCA
EW734607       <-- TTTATGCCCTCCACTGCTCCGATTGTTGAAAACGCCCAACAACTCCCGCA
FD969935       <-- TTTATGCCCTCCACTGCTCCGATTGTTGAAAACGCCCAACAACTCCCGCA
FD540384       <-- TTTATGCCCTCCACTGCTCCGATTGTTGAAAACGCCCAACAACTCCCGCA
EX888720       <-- TTTATGCCCTCCACTGCTCCGATTGTTGAAAACGCCCAACAACTCCCGCA
FD559434       <-- TTTATGCCCTCCACTGCTCCGATTGTTGAAAACGCCCAACAACTCCCGCA
FD534454       <-- TTTATGCCCTCCACTGCTCCGATTGTTGAAAACGCCCAACAACTCCCGCA
EW726271       <-- TTTATGCCCTCCACTGCCCCGATTGTTGAAAACGCCCAACAACTCCCGCA
EX906352       <-- TTTATGCCCTCCACTGCTCCGATTGTTGAAAACGCCCAACAACTCACGCA
EY949287       <-- TTTATGCCCTCCACTGCTCCGATTGTTGAAAACGCCCAACAACTCCCGCA
FD946808       <-- TTTATGCCCTCCACTGCTCCGATTGTTGAAAACGCCCAACAACTCCCGCA
FD963281       <-- TTTATGCCCTCCACTGCTCCGATTGTTGAAAACGCCCAACAACTCCCGCA
FD972255       <-- ..................................................
FY429626       --> ..................................................
EV541880       --> ..................................................
FD959634       --> ..................................................
EV542583       --> ..................................................
FY429433       --> ..................................................
FD968172       --> ..................................................
FY437201       --> ..................................................
FD536899       --> ..................................................
EW738427       --> ..................................................
EX767033       --> ..................................................
EV572590       --> TTTATGCCCTCCACTGCTCCGATTGTTGAAAACGCCCAACAACTCCCGCA
FY446258       --> ..............TGCTCCGATTGTTGAAAACGCCCAACAACTCCCGCA

               1201   -   1251
UN21659        --> GCTTCCCTGATCTTTAACCTCAGCGACAGCACCATCCTTCCTCCAGTCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV550733       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FY439615       <-- ..................................................  Raphanus sativus cv GSK3-1
EV551166       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV537698       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD979368       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FY449127       <-- GCTTCCCTGATCTTTAACCTCAGCGACAGCACCATCCTTCCTCCAGTCAA  Raphanus sativus cv GSK3-1
FY453570       <-- GCTTCCCTGATCTTTAACCTCAGCGACAGCACCATCCTTCCTCCAGTCAA  Raphanus sativus cv GSK3-1
EV538615       <-- GCTTCCCTGATCTTTAACCTCAGCGACGGCACCTTCCTTCCTCCAGTCAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV548983       <-- GCTTCCTTGATCTTTAACCTCAGCGACGGCACCTTCCTTCCTCCAGTCAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FY429164       <-- GCTTCCCTGATCTTTAACCTCAGCGACAGCACCATCCTTCCTCCAGTCAA  Raphanus sativus cv GSK3-1
FY438847       <-- GCTTCCCTGATCTTTAACCTCAGCGACAGCACCATCCTTCCTCCAGTCAA  Raphanus sativus cv GSK3-1
FY449259       <-- GCTTCCCTGATCTTTAACCTCAGCGACAGCACCATCCTTCCTCCAGTCAA  Raphanus sativus cv GSK3-1
FY447983       <-- GCTTCCCTGATCTTTAACCTCAGCGACAGCACCATCCTTCCTCCAGTCAA  Raphanus sativus cv GSK3-1
EW723416       <-- GCTTCCCTGATCTTTAACCTCAGCGACAGCACCATCCTTCCTCCAGTCAA  Raphanus sativus cv Early Scarlet Globe
FD543233       <-- GCTTCCCTGATCTTTAACCTCAGCGACGGCACCTTCCTTCCTCCAGTCAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FY450904       <-- GCTTCCCTGATCTTTAACCTCAGCGACAGCACCATCCTTCCTCCAGTCAA  Raphanus sativus cv GSK3-1
EW734607       <-- GCTTCCCTGATCTTTAACCTCAGCGACAGCACCTTCCTTCCTCCAGTCAA  Raphanus sativus cv Rat-Tail Radish #3870
FD969935       <-- GCTTCCCTGATCTTTAACCTCAGCGACGGCACCTTCCTTCCTCCAGTCAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD540384       <-- GCTTCCATGATCTTTAACCTCAGCGACGGCACCTTCCTTCCTCCAATCAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX888720       <-- GCTTCCCTGATCTTTAACCTCAGCGACAGCACCATCCTTCCTCCAGTCAA  Raphanus sativus var. oleiformis
FD559434       <-- GCTTCCCTGATCTTTAACCTCAGCGACGGCACCTTCCTTCCTCCAGTCAA  Raphanus raphanistrum subsp. landra
FD534454       <-- GCTTCCCTGATCTTTAACCTCAGCGACAGCACCTTCCTTCCTCCAGTCAA  Raphanus raphanistrum subsp. maritimus
EW726271       <-- GCTTCCCTGATCTTTAACCTCAGCGACAGCACCATCCTTCCTCCAGTCAA  Raphanus sativus cv Early Scarlet Globe
EX906352       <-- GCTTCCCTGATCTTTAACCTCAGCGACAGCACCATCCTTCCTCCAGTCAA  Raphanus sativus cv Rat-Tail Radish #3870
EY949287       <-- GCTTCCCTGATCTTTAACCTCAGCGACAGCACCATCCTTCCTCCAGTCAA  Raphanus sativus cv Rat-Tail Radish #3870
FD946808       <-- GCTTCCCTGATCTTTAACCTCAGCGACAGCACCATCCTTCCTCCAGTCAA  Raphanus sativus cv Early Scarlet Globe
FD963281       <-- GCTTCCCTGATCTTTAACCTCAGCGACAGCACCTTCCTTCCTCCAGTCAA  Raphanus raphanistrum subsp. maritimus
FD972255       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FY429626       --> ..................................................  Raphanus sativus cv GSK3-1
EV541880       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD959634       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EV542583       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FY429433       --> ..................................................  Raphanus sativus cv GSK3-1
FD968172       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FY437201       --> ..................................................  Raphanus sativus cv GSK3-1
FD536899       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EW738427       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EX767033       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV572590       --> GCTTCCCTGATCTTTAACCTCAGCGACAGCACCTTCCTTCCTCCAGTCAA  Raphanus raphanistrum subsp. landra
FY446258       --> GCTTCCCTGATCTTTAACCTCAGCGACAGCACCATCCTTCCTCCAGTCAA  Raphanus sativus cv GSK3-1

               1251   -   1301
UN21659        --> CGCTCTCCGGGATAGCGTCACCTACACGCGCCTCGTAGCGAAGGCTGGTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV550733       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FY439615       <-- ..................................................  Raphanus sativus cv GSK3-1
EV551166       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV537698       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD979368       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FY449127       <-- CGCTCTCCGGGATAGCGTCACCTACACGCGCCTC-TAGCGAAGGCT....  Raphanus sativus cv GSK3-1
FY453570       <-- CGCTCTCCGGGATAGCGTCACCTACACGCGCCTCGTAGCGAAGGCTGGTC  Raphanus sativus cv GSK3-1
EV538615       <-- CGCTCTCCGGGATAGCGTCACCTACACGCGCCTCGTAGCGAACGCTGGTC  Raphanus raphanistrum subsp. raphanistrum (MS)
EV548983       <-- CGCTCTCCGGGATAGCGTCACCTACACGCGCCTCGTAGCGAAGGCTGGTC  Raphanus raphanistrum subsp. raphanistrum (NY)
FY429164       <-- CGCTCTCCGGGATAGCGTCACCTACACGCGCCTCGTAGCGAAGGCTGGTC  Raphanus sativus cv GSK3-1
FY438847       <-- CGCTCTCCGGGATAGCGTCACCTACACGCGCCTCGTAGCGAAGGCTGGTC  Raphanus sativus cv GSK3-1
FY449259       <-- CGCTCTCCGGGATAGCGTCACCTACACGCGCCTCGTAGCGAAGGCTGGTC  Raphanus sativus cv GSK3-1
FY447983       <-- CGCTCTCCGGGATAGCGTCACCTACACGCGCCTCGTAGCGAAGGCTGGTC  Raphanus sativus cv GSK3-1
EW723416       <-- CGCTCTCCGGGATAGCGTCACCTACACGCGCCTCGTATCGAAGGCTGGTC  Raphanus sativus cv Early Scarlet Globe
FD543233       <-- CGCACTCCGGGATAGCGTCACCTACACGCGCCTCGTAGCGAAGGCTGGTC  Raphanus raphanistrum subsp. raphanistrum (MS)
FY450904       <-- CGCTCTCCGGGATAGCGTCACCTACACGCGCCTCGTAGCGAAGGCTGGTC  Raphanus sativus cv GSK3-1
EW734607       <-- CGCTCTCCGGGATAGCGTCACCTACACGCGCCTCGTAGCGAAGGCTGGTC  Raphanus sativus cv Rat-Tail Radish #3870
FD969935       <-- CGCTCTCCGGGATAGCGTCACCTACACGCGCCTCGTAGCGAAGGCTGGTC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD540384       <-- CGCTCTCCGGGATAGCGTCACCTACACGCGCCTCGTAGCGAAGGCTGGTC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX888720       <-- CGCTCTCCGGGATAGCGTCACCTACACGCGCCTCGTATCGAAGGCTG-TC  Raphanus sativus var. oleiformis
FD559434       <-- CGCTCTCCGGGATAGCGTCACCTACACGCGCCTCGTAGCGAAGGCTGGTC  Raphanus raphanistrum subsp. landra
FD534454       <-- CGCTCTCCGGGATAGCGTCACCTACACGCGCCTCGTAGCGAAGGCTGGTC  Raphanus raphanistrum subsp. maritimus
EW726271       <-- CGCTCTCCGGGATAGCGTCACCTACACGCGCCTCGTATCGAAGGCTGGTC  Raphanus sativus cv Early Scarlet Globe
EX906352       <-- CGCTCTCCGGGATAGCGTCACCTACACGCGCCTCGTATCGAAGGCTGGTC  Raphanus sativus cv Rat-Tail Radish #3870
EY949287       <-- CGCTCTCCGGGATAGCGTCACCTACACGCGCCTCGTATCGAAGGCTGGTC  Raphanus sativus cv Rat-Tail Radish #3870
FD946808       <-- CGCTCTCCGGGATAGCGTCACCTACACGCGCCTCGTATCGAAGGCTGGTC  Raphanus sativus cv Early Scarlet Globe
FD963281       <-- CGCTCTCCGGGATAGCGTCACCTACACGCGCCTCGTAGCGAAGGC.....  Raphanus raphanistrum subsp. maritimus
FD972255       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FY429626       --> ..................................................  Raphanus sativus cv GSK3-1
EV541880       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD959634       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EV542583       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FY429433       --> ..................................................  Raphanus sativus cv GSK3-1
FD968172       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FY437201       --> ..................................................  Raphanus sativus cv GSK3-1
FD536899       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EW738427       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EX767033       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV572590       --> CGCTCTCCGGGATAGCGTCACCTACACGCGCCTCGTAGCGAAGGCTGGTC  Raphanus raphanistrum subsp. landra
FY446258       --> CGCTCTCCGGGATAGCGTCACCTACACGCGCCTCGTAGCGAAGGCTGGTC  Raphanus sativus cv GSK3-1

               1301   -   1351
UN21659        --> TTGGTGGCTTTCCTCTTGAGCCTAGACCCGAGGTACATGGATCTATACTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV550733       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FY439615       <-- ..................................................  Raphanus sativus cv GSK3-1
EV551166       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV537698       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD979368       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FY449127       <-- ..................................................  Raphanus sativus cv GSK3-1
FY453570       <-- TTGGTGGCTTTCCTCTTGAGCCTAGACCCGAGGTACATGGATCTATACTC  Raphanus sativus cv GSK3-1
EV538615       <-- TTCGTGGCTTTCCTCTTGAGCCTAGACCCGAGGTACATGGATCTATACTC  Raphanus raphanistrum subsp. raphanistrum (MS)
EV548983       <-- TTGGTGGCTTTCCTCTTGAGCCTAGACCCGAGGTACATGGATCTATACTC  Raphanus raphanistrum subsp. raphanistrum (NY)
FY429164       <-- TTGGTGGCTTTCCTCTTGAGCCTAGACCCGAGGTACATGGATCTATACTC  Raphanus sativus cv GSK3-1
FY438847       <-- TTGGTGGCTTTCCTCTTGAGCCTAGACCCGAGGTACATGGATCTATACTC  Raphanus sativus cv GSK3-1
FY449259       <-- TTGGTGGCTTTCCTCTTGAGCCTAGACCCGAGGTACATGGATCTATACTC  Raphanus sativus cv GSK3-1
FY447983       <-- TTGGTGGCTTTCCTCTTGAGCCTAGACCCGAGGTACATGGATCTATACTC  Raphanus sativus cv GSK3-1
EW723416       <-- TTGGTGGCTTTCCTCTTGAGCCTAGGCCCGAGGTACATGGATCTATACTC  Raphanus sativus cv Early Scarlet Globe
FD543233       <-- TTCGTGGCTTTCCTCTTGAGCCTAGACCCGACGTACATGGATCTATACTC  Raphanus raphanistrum subsp. raphanistrum (MS)
FY450904       <-- TTGGTGGCTTTCCTCTTGAGCCTAGACCCGAGGTACATGGATCTATACTC  Raphanus sativus cv GSK3-1
EW734607       <-- TTCGTAGCTTTCCTCTTGAGCCTAGACCCGAGGTACATGGATCTATACTC  Raphanus sativus cv Rat-Tail Radish #3870
FD969935       <-- TTCGTGGCTTTCCTCTTGAGCCTAGACCCGACGTACATGGATCTATACTC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD540384       <-- TTCGTGGCTTTCCTCTTGAGCCTAGACCCGAGGTACATGGATCTATACTC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX888720       <-- TTGGTGGCTTTCCTCTTGAGCCTAGACCCGAGGTACATGGATCTATACTC  Raphanus sativus var. oleiformis
FD559434       <-- TTGGTGGCTTTCCTCTTGAGCCTAGACCCGAGGTACATGGATCTATACTC  Raphanus raphanistrum subsp. landra
FD534454       <-- TTCGTGGCTTTCCTCTTGAGCCTAGACCCGAGGTACATGGATCTATACTC  Raphanus raphanistrum subsp. maritimus
EW726271       <-- TTGGTGGCTTTCCTCTTGAGCCTAGGCCCGAGGTACATGGATCTATACTC  Raphanus sativus cv Early Scarlet Globe
EX906352       <-- TTGGTGGCTTTCCTCTTGAGCCTAGACCCGAGGTACATGGATCTATACTC  Raphanus sativus cv Rat-Tail Radish #3870
EY949287       <-- TTGGTGGCTTTCCTCTTGAGCCTAGACCCGAGGTACATGGATCTATACTC  Raphanus sativus cv Rat-Tail Radish #3870
FD946808       <-- TTGGTGGCTTTCCTCTTGAGCCTAGACCCGAGGTACATGGATCTATGCTC  Raphanus sativus cv Early Scarlet Globe
FD963281       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD972255       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FY429626       --> ..................................................  Raphanus sativus cv GSK3-1
EV541880       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD959634       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EV542583       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FY429433       --> ..................................................  Raphanus sativus cv GSK3-1
FD968172       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FY437201       --> ..................................................  Raphanus sativus cv GSK3-1
FD536899       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EW738427       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EX767033       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV572590       --> TTCGTGGCTTTCCTCTTGAGCCTAGACCCGAGGTACATGGATCTATACTC  Raphanus raphanistrum subsp. landra
FY446258       --> TTGGTGGCTTTCCTCTTGAGCCTAGACCCGAGGTACATGGATCTATACTC  Raphanus sativus cv GSK3-1

               1351   -   1401
UN21659        --> ATCGTTAGTGAGATCCGCGAACTTCGTAAGACCCAGTCTGTAACTAAGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV550733       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FY439615       <-- ..................................................  Raphanus sativus cv GSK3-1
EV551166       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV537698       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD979368       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FY449127       <-- ..................................................  Raphanus sativus cv GSK3-1
FY453570       <-- ATCG..............................................  Raphanus sativus cv GSK3-1
EV538615       <-- ATCGTTAGTGAGATCCGCAAACTTCGTAAGGCCCAATCTGTAACTc....  Raphanus raphanistrum subsp. raphanistrum (MS)
EV548983       <-- ATCGTTAGTGAGATCCGCGAACTTCGTAAGACCCAGTCTGTAACTAAGGT  Raphanus raphanistrum subsp. raphanistrum (NY)
FY429164       <-- ATCGTTAGTGAGATCCGCGAACTTCGTAAGACCCAGTCTGTAACTAAGGT  Raphanus sativus cv GSK3-1
FY438847       <-- ATCGTTAGTGAGATCCGCGAACTTCGTAAGACCCAGTCTGTAACTAAGGT  Raphanus sativus cv GSK3-1
FY449259       <-- ATCGTTAGTGAGATCCGCGAACTTCGTAAGACCCAGTCTGTAACTAAGGT  Raphanus sativus cv GSK3-1
FY447983       <-- ATCGTTAGTGAGATCCGCGAACTTCGTAAGACCCAGTCTGTAACTAAGGT  Raphanus sativus cv GSK3-1
EW723416       <-- ATCGTTAGTGAGATCCGCGAACTTCGTAAGACCCAATCTGTAACTAAGAT  Raphanus sativus cv Early Scarlet Globe
FD543233       <-- ATTGTTAGTGAGATCCGCGAACTTCGTAAGACCCAGTCTGTAACTAAGAT  Raphanus raphanistrum subsp. raphanistrum (MS)
FY450904       <-- ATCGTTAGTGAGATCCGCGAACTTCGTAAGACCCAGTCTGTAACTAAGGT  Raphanus sativus cv GSK3-1
EW734607       <-- ATCGTTAGTGAGATCCGCGAACTTCGTAAGACCCAGTCTGTAACTAAGAT  Raphanus sativus cv Rat-Tail Radish #3870
FD969935       <-- ATTGTTAGTGAGATCCGCGAACTTCGTAAGACCCAGTCTGTAACTAAGAT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD540384       <-- ATCGTTAGTGAGATCCGCGAACTTCGTAAGACCCAATCTGTAACTAAGAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX888720       <-- ATCGTTAGTGAGATCCGCGAACTTCGTAAGACCCAATCTGTAACTAAGAT  Raphanus sativus var. oleiformis
FD559434       <-- ATCGTTAGTGAGATCCGCGAACTTCGTAAGACCCAGTCTGTAACTAAGGT  Raphanus raphanistrum subsp. landra
FD534454       <-- ATCGTTAGTGAGATCCGCGAACTTCGTAAGACCCAGTCTGTAACTAAGAT  Raphanus raphanistrum subsp. maritimus
EW726271       <-- ATCGTTAGTGAGATCCGCGAACTTCGTAAGACCCAATCTGTAACTAAGAT  Raphanus sativus cv Early Scarlet Globe
EX906352       <-- ATCGTTAGTGAGATCCGCGAACTTCGTAAGACCCAATCTGTAACTAAGAT  Raphanus sativus cv Rat-Tail Radish #3870
EY949287       <-- ATCGTTAGTGAGATCCGCGAACTTCGTAAGACCCAATCTGTAACTAAGAT  Raphanus sativus cv Rat-Tail Radish #3870
FD946808       <-- ATCGTTAGTGAGATCCGCGAACTTCGTAAGACCCAATCTGTAACTAAGAT  Raphanus sativus cv Early Scarlet Globe
FD963281       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD972255       <-- ................................................AT  Raphanus raphanistrum subsp. raphanistrum (MS)
FY429626       --> ..................................................  Raphanus sativus cv GSK3-1
EV541880       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD959634       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EV542583       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FY429433       --> ..................................................  Raphanus sativus cv GSK3-1
FD968172       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FY437201       --> ..................................................  Raphanus sativus cv GSK3-1
FD536899       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EW738427       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EX767033       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV572590       --> ATCGTTAGTGAGATCCGCGAACTTCGTAAGACCCAGTCTGTAACTAAGAT  Raphanus raphanistrum subsp. landra
FY446258       --> ATCGTTAGTGAGATCCGCGAACTTCGTAAGACCCAGTCTGTAACTAAGGT  Raphanus sativus cv GSK3-1

               1401   -   1451
UN21659        --> TCTTCCCGTTGTGTTCGTCTATGAAACGGAGATTGTCTTTAAAGATCTCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV550733       <-- ..................................................
FY439615       <-- ..................................................
EV551166       <-- ..................................................
EV537698       <-- ..................................................
FD979368       <-- ..................................................
FY449127       <-- ..................................................
FY453570       <-- ..................................................
EV538615       <-- ..................................................
EV548983       <-- TCTTCCCGTTGTGTTCGTCTATGAAACGGAGATTGTCTTTAAAGATCTCG
FY429164       <-- TCTTCCCGTTGTGTTCGTCTATGAAACGGAGATTGTCTTTAAAGATCTCG
FY438847       <-- TCTTCCCGTTGTGTTCGTCTATGAAACGGAGATTGTCTTTAAAGATCTCG
FY449259       <-- TCTTCCCGTTGTGTTCGTCTATGAAACGGAGATTGTCTTTAAAGATCTCG
FY447983       <-- TCTTCCCGTTGTGTTCGTCTATGAAACGGAGATTGTCTTTAAAGATCTCG
EW723416       <-- TCTTCCCGTTGTGTTCGTCTATGAAACGGAGATTGTCTTTAAAGATCTCG
FD543233       <-- TCTTCCCGTTGTGTTCGTCTATGAAACGGAGATTGTCTTTAAAGATCTCG
FY450904       <-- TCTTCCCGTTGTGTTCGTCTATGAAACGGAGATTGTCTTTAAAGATCTCG
EW734607       <-- TCTTCCCGTTGTGTTCGTCTATGAAACGGAGATTGTCTTTAAAGATCTCG
FD969935       <-- TCTTCCCGTTGTGTTCGTCTATGAAACGGAGATTGTCTTTAAAGATCTCG
FD540384       <-- TCTTCCCGTTGTGTTCGTCTATGAAACGGAGATTGTCTTTAAAGATCTCG
EX888720       <-- TCTTCCCGTTGTGTTCGTCTATGAAACGGAGATTGTCTTTAAAGATCTCG
FD559434       <-- TCTTCCCGTTGTGTTCGTCTATGAAACGGAGATTGTCTTTAAAGATCTCG
FD534454       <-- TCTTCCCGTTGTGTTCGTCTATGAAACGGAGATTGTCTTTAAAGATCTCG
EW726271       <-- TCTTCCCGTTGTGTTCGTCTATGAAACGGAGATTGTCTTTAAAGATCTCG
EX906352       <-- TCTTCCCGTTGTGTTCGTCTATGAAACGGAGATTGTCTTTAAAGATATCG
EY949287       <-- TCTTCCCGTTGTGTTCGTCTATGAAACGGAGATTGTCTTTAAAGATCTCG
FD946808       <-- TCTTCCCGTTGTGTTCGTCTATGAAACGGAGATTGTCTTTAAAGATCTCG
FD963281       <-- ..................................................
FD972255       <-- TCTTCCCGTTGTGTTCGTCTATGAAACGGAGATTGTCTTTAAAGATCTCG
FY429626       --> ..................................................
EV541880       --> ..................................................
FD959634       --> ..................................................
EV542583       --> ..................................................
FY429433       --> ..................................................
FD968172       --> ..................................................
FY437201       --> ..................................................
FD536899       --> ..................................................
EW738427       --> ..................................................
EX767033       --> ..................................................
EV572590       --> TCTTCCCGTTGTGTTCGTCTATGAAACGGAGATTGTCTTTAAAGATCTCG
FY446258       --> TCTTCCCGTTGTGTTCGTCTATGAAACGGAGATTGTCTTTAAAGATCTCG

               1451   -   1501
UN21659        --> AACCGTCGATCTTTCTCTGTAAGAGAATTCTGAGCCTTCCCGTGTTTCAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV550733       <-- ..................................................
FY439615       <-- ..................................................
EV551166       <-- ..................................................
EV537698       <-- ..................................................
FD979368       <-- ..................................................
FY449127       <-- ..................................................
FY453570       <-- ..................................................
EV538615       <-- ..................................................
EV548983       <-- AACCGTCGATCTTTCTCTGTAAGAGAATTCTGAGC...............
FY429164       <-- AACCGTCGATCTTTCTCTGTAAGAGAATTCTGAGCCTTCCCGTGTTTCAC
FY438847       <-- AACCGTCGATCTTTCTCTGTAAGAGAATTCTGAGCCTTCCCGTGTTTCAC
FY449259       <-- AACCGTCGATCTTTCTCTGTAAGAGAATTCTGAGCCTTCCCGTGTTTCAC
FY447983       <-- AACCGTCGATCTTTCTCTGTAAGAGAATTCTGAGCCTTCCCGTGTTTCAC
EW723416       <-- AACCGTCGATCTTTCTCTGTAAGAGAATTCTGAGCCTTCCCGTGTTTCAC
FD543233       <-- AACCGTCGATCTTTCTCTGTAAGAGAATTCTGAGCCTTCCCGCGTTTGAC
FY450904       <-- AACCGTCGATCTTTCTCTGTAAGAGAATTCTGAGCCTTCCCGTGTTTCAC
EW734607       <-- AACCGTCGATCTTTCTCTGTAAGAGAATTCTGAGCCTTCCCGTGTTTCAC
FD969935       <-- AACCGTCGATCTTTCTCTGTAAGAGAATTCTGAGCCTTCCCGCGTTTGAC
FD540384       <-- AACCGTCGATCTTTCTCTGTAAGAGAATTCTGAGCCTTCCCGTGTTTCAC
EX888720       <-- AACCGTCGATCTTTCTCTGTAAGAGAATTCTGAGCCTTCCCGTGTTTCAC
FD559434       <-- AACCGTCGATCTTTCTCTGTAAGAGAATTCTGAGCCTTCCCGTGTTTCAC
FD534454       <-- AACCGTCGATCTTTCTCTGTAAGAGAATTCTGAGCCTTCCCGTGTTTCAC
EW726271       <-- AACCGTCGATCTTTCTCTGTAAGAGAATTCTGAGCCTTCCCGTGTTTCAC
EX906352       <-- AACCGTCGATCTTTCTCTGTAAGAGAATTCTGAGCCTTCCCGTGTTTCAC
EY949287       <-- AACCGTCGATCTTTCTCTGTAAGAGAATTCTGAGCCTTCCCGTGTTTCAC
FD946808       <-- AACCGTCGATCTTTCTCTGTAAGAGAATTCTGAGCCTTCCCGTGTTTCAC
FD963281       <-- ..................................................
FD972255       <-- AACCGTCGATCTTTCTCTGTAAGAGAATTCTGAGCCTTCCCGTGTTTCAC
FY429626       --> ..................................................
EV541880       --> ..................................................
FD959634       --> ..................................................
EV542583       --> ..................................................
FY429433       --> ..................................................
FD968172       --> ..................................................
FY437201       --> ..................................................
FD536899       --> ..................................................
EW738427       --> ..................................................
EX767033       --> ..................................................
EV572590       --> AACCGTCGATCTTTCTCTGTAAGAGAATTCTGAGCCTTCCCGTGTTTCAC
FY446258       --> AACCGTCGATCTTTCTCTGTAAGAGAATTCTGAGCCTTCCCGTGTTTCAC

               1501   -   1551
UN21659        --> TAGCCACTCCTCGTACAGTCTTGAAACTTCGGCATCGCTTCTGGAAGAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV550733       <-- ..................................................
FY439615       <-- ..................................................
EV551166       <-- ..................................................
EV537698       <-- ..................................................
FD979368       <-- ..................................................
FY449127       <-- ..................................................
FY453570       <-- ..................................................
EV538615       <-- ..................................................
EV548983       <-- ..................................................
FY429164       <-- TAGCCACTCCTCGTACAGTCTTGAAACTTCGGCATCGCTTCTGGAAGAGA
FY438847       <-- TAGCCACTCCTCGTACAGTCTTGAAACTTCGGCATCGCTTCTGGAAGAGA
FY449259       <-- TAGCCACTCCTCGTACAGTCTTGAAACTTCGGCATCGCTTCTGGAAGAGA
FY447983       <-- TAGCCACTCCTCGTACAGTCTTGAAACTTCGGCATCGCTTCTGGAAGAGA
EW723416       <-- TAGCCACTCCTCGTACAGTCTTGAAACTTCGGCATCGCTTCTGGAAGAGA
FD543233       <-- TAGCCACTCCTCGTACAGTCTTGAAACTTCGGCATCGCTTCTGGAAGAGA
FY450904       <-- TAGCCACTCCTCGTACAGTCTTGAAACTTCc...................
EW734607       <-- TAACCACTCCTTGTATAGTCTTGAAACTTCGGCATCGCTTCTGGAAGAGA
FD969935       <-- TAGCCACTCCTCGTACAGTCTTGAAACTTCGGCATCGCTTCTGGAAGAGA
FD540384       <-- TAGCCACTC--CGTACAGTCTTGAAACTTCGGCATCGCTTCTGGAAGAGA
EX888720       <-- TAGCCACTCCTCGTACAGTCTTGAAACTTCGGCATCGCTTCTGGAAGAGA
FD559434       <-- TAGACACTCCTCGTACAGTCTTGAAACTTCGGCATCGCTTCTGGAAGAGA
FD534454       <-- TAACCACTCCTTGTATAGTCTTGAAACTTCGGCATCGCTTCTGGAAGAGA
EW726271       <-- TAGCCACTCCTCGTACAGTCTTGAAACTTCGGCATCGCTTCTGGAAGAGA
EX906352       <-- TAGCCACTCCTCGTACAGTCTTGAAACTTCGGCATCGCTTCTGGAAGAGA
EY949287       <-- TAGCCACTCCTCGTACAGTCTTGAAACTTCGGTATCGCTTCTGGAAGAGA
FD946808       <-- TAGCCACTCCTCGTACAGTCTTGAAACTTCGGCATCGCTTCTGGAAGAGA
FD963281       <-- ..................................................
FD972255       <-- TAGCCACTCCTCGTACAGTCTTGAAACTTCGGCATCGCTTCTGGAAGAGA
FY429626       --> ..................................................
EV541880       --> ..................................................
FD959634       --> ..................................................
EV542583       --> ..................................................
FY429433       --> ..................................................
FD968172       --> ..................................................
FY437201       --> ..................................................
FD536899       --> ..................................................
EW738427       --> ..................................................
EX767033       --> ..................................................
EV572590       --> TAACCACTCCTTGTATAGTCT.............................
FY446258       --> TAGCCACTCCTCGTACAGTCTTGAAACTTCGGCATCGCTTCTGGAAGAGA

               1551   -   1601
UN21659        --> CGGTGCGGTGGTTTTTGTCGTAGGAAATGATTGACATATCCATCGCTGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV550733       <-- ..................................................
FY439615       <-- ..................................................
EV551166       <-- ..................................................
EV537698       <-- ..................................................
FD979368       <-- ..................................................
FY449127       <-- ..................................................
FY453570       <-- ..................................................
EV538615       <-- ..................................................
EV548983       <-- ..................................................
FY429164       <-- CGGTGCGGTGGTTTTTGTCGTAGGAAATGATTGACATATCCATCGCTGAT
FY438847       <-- CGGTGCGGTGGTTTTTGTCGTAGGAAATGATTGACATATCCATCGCTGAT
FY449259       <-- CGGTGCGGTGGTTTTTGTCGTAGGAAATGATTGACATATCCATCGCTGAT
FY447983       <-- CGGTGCGGTGGTTTTTGTCGTAGGAAATGATTGACATATCCATCGCTGAT
EW723416       <-- CGGTGCGGTGGTTTTTGTCGTAGGAAATGATTGACATATCCATCGCTGAT
FD543233       <-- CGGTGCGGTGGTTTTTGTCGTAGGAAATGATTGACATATCCATCGCTGAT
FY450904       <-- ..................................................
EW734607       <-- CGGTGCGGTGGTTTTTGTCGTAGGAAATGATTGACATATCCATCGCTGAT
FD969935       <-- CGGTGCGGTGGTTTTTGTCGTAGGAAATGATTGACATATCCATCGCTGAC
FD540384       <-- CGGTGCGGTGGTTTTTGTCGTAGGAAATGATTGACATATCCATCGCTGAT
EX888720       <-- CGGTGCGGTGGTTTTTGTCGTAGGAAATGATTGACATATCCATCGCTGAT
FD559434       <-- CGGTGCGGTGGTTTTTGTCATAGGAAATGATTGACATATCCATCGCTGAT
FD534454       <-- CGGTGCGGTGGTTTTTGTCGTAGGAAATGATTGACATATCCATCGCTGAT
EW726271       <-- CGGTGCGGTGGTTTTTGTCGTAGGAAATGATTGACATATCCATCGCTGAT
EX906352       <-- CGGTGCGGTGGTTTTTGTCGTAGGAAATGATTGACATATCCATCGCTGAT
EY949287       <-- CGGTGCGGTGGTTTTTGTCGTAGGAAATGATTGACATATCCATCGCTGAT
FD946808       <-- CGGTGCGGTGGTTTTTGTCGTAGGAAATGATTGACATATCCATCGCTGAT
FD963281       <-- ..................................................
FD972255       <-- CGGTGCGGTGGTTTTTGTCGTAGGAAATGATTGACATATCCATCGCTGAT
FY429626       --> ..................................................
EV541880       --> ..................................................
FD959634       --> ..................................................
EV542583       --> ..................................................
FY429433       --> ..................................................
FD968172       --> ..................................................
FY437201       --> ..................................................
FD536899       --> ..................................................
EW738427       --> ..................................................
EX767033       --> ..................................................
EV572590       --> ..................................................
FY446258       --> CGGTGCGGTGGTTTTTGTCGTAGGAAATGATTGACATATCCATCGCTGAT

               1601   -   1651
UN21659        --> GATACCACGATCATCGTTAAGAAGAGGATCACGGTAGCTGAGTTAAGGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV550733       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FY439615       <-- ..................................................  Raphanus sativus cv GSK3-1
EV551166       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV537698       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD979368       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FY449127       <-- ..................................................  Raphanus sativus cv GSK3-1
FY453570       <-- ..................................................  Raphanus sativus cv GSK3-1
EV538615       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV548983       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FY429164       <-- GATACCACGATCATCGTTAAGAAGAGGATAGCGGTAGCTGAGCTAAGGAG  Raphanus sativus cv GSK3-1
FY438847       <-- GATACCACGATCATCGTTAAGAAGAGGATAGCGGTAGCTGAGCTAAGGAG  Raphanus sativus cv GSK3-1
FY449259       <-- GATACCACGATCATCGTTAAGAAGAGGATAGCGGTAGCTGAGCTAAGGAG  Raphanus sativus cv GSK3-1
FY447983       <-- GATACCACGATCATCGTTAAGAAGAGGATAGCGGTAGCTGAGCTAAGGAG  Raphanus sativus cv GSK3-1
EW723416       <-- GATACCACGATCATCGTTAAGAAGAGGATCACGGTAGCTGAGTTAAGGAG  Raphanus sativus cv Early Scarlet Globe
FD543233       <-- GATACCACGATCATCGTTAAGAAGAGGATCACGGTAGCTGAGTTAAAGAG  Raphanus raphanistrum subsp. raphanistrum (MS)
FY450904       <-- ..................................................  Raphanus sativus cv GSK3-1
EW734607       <-- GATACCACGATCATCGTTAAGAAGAGGATAGCGGTAGCTGAGCTAAGGAG  Raphanus sativus cv Rat-Tail Radish #3870
FD969935       <-- GATACCACGATCATCGTTAAGAAGAGGATCACGGTAGCTGAGTTAAAGAG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD540384       <-- GATACCACGATCATCGTTAAGAAGAGGATCACGGTAGCTGAGTTAAGGAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX888720       <-- GATACCACGATCATCGTTAAGAAGAGGATCACGGTAGCTGAGTTAAGGAG  Raphanus sativus var. oleiformis
FD559434       <-- GATACCACGATCATCGTTAAGAAGAGGATCACGGTAGCTGAGTTAAGGAG  Raphanus raphanistrum subsp. landra
FD534454       <-- GATACCACGATCATCGTTAAGAAGAGGATAGCGGTAGCTGAGCTAAGGAG  Raphanus raphanistrum subsp. maritimus
EW726271       <-- GATACCACGATCATCGTTAAGAAGAGGATCACGGTAGCTGAGTTAAGGAG  Raphanus sativus cv Early Scarlet Globe
EX906352       <-- GATACCACGATCATCGCTAAGAAGAGGATCACGGTAGCTGAGTTAAGGAG  Raphanus sativus cv Rat-Tail Radish #3870
EY949287       <-- GATACCACGATCATCGTTAAGAAGAGGATCACGGTAGCTGAGTTAAGGAG  Raphanus sativus cv Rat-Tail Radish #3870
FD946808       <-- GATACCACGATCATCGTTAAGAAGAGGATCACGGTAGCTGAGTTAAGGAG  Raphanus sativus cv Early Scarlet Globe
FD963281       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD972255       <-- GATACCACGATCATCGTTAAGAAGAGGATCACGGTAGCTGAGTTAAGGAG  Raphanus raphanistrum subsp. raphanistrum (MS)
FY429626       --> ..................................................  Raphanus sativus cv GSK3-1
EV541880       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD959634       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EV542583       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FY429433       --> ..................................................  Raphanus sativus cv GSK3-1
FD968172       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FY437201       --> ..................................................  Raphanus sativus cv GSK3-1
FD536899       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EW738427       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EX767033       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV572590       --> ..................................................  Raphanus raphanistrum subsp. landra
FY446258       --> GATACCACGATCATC...................................  Raphanus sativus cv GSK3-1

               1651   -   1701
UN21659        --> CTTCATTTTCTT-TTCACTGTTTTTCTTTGGAGGAGAAGGAAAGATGATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV550733       <-- ..................................................
FY439615       <-- ..................................................
EV551166       <-- ..................................................
EV537698       <-- ..................................................
FD979368       <-- ..................................................
FY449127       <-- ..................................................
FY453570       <-- ..................................................
EV538615       <-- ..................................................
EV548983       <-- ..................................................
FY429164       <-- CTTCATTTTTTTCTTCACTGTTTc..........................
FY438847       <-- CTTCA.............................................
FY449259       <-- CTc...............................................
FY447983       <-- CTTCATTT..........................................
EW723416       <-- CTTCATTTTCTT-TTCACTGTTTTTCTTTGGAGGAGAAGGAAAGATGATG
FD543233       <-- CTTCATTTTCTC-TTCACTGTTTTTCTTTGGAGGAGAAGGAAAG......
FY450904       <-- ..................................................
EW734607       <-- CTTCATTTTTTTCTTCACTGTTTTTCTTTGGAGGAGAAGGAAAG......
FD969935       <-- CTTCATTTTCTC-TTCACTGTTTTTCTTTGGAGGAGAAGGAAAGATGATG
FD540384       <-- CTTCATTTTCTT-TTCACTGTTTTTCTTTGGAGGAGAAGGAAAGATGATG
EX888720       <-- CTTCATTTTCTT-TTCACTGTTTTTCTTTGGAGGAGAAGGAAAGATGATG
FD559434       <-- CTTCATTTTCTT-TTCACTGTTTTTCTTTGGAGGAGAAGGAAAGATGATG
FD534454       <-- CTTCATTTTtttcttccc................................
EW726271       <-- CTTCATTTTCTT-TTCACTGTTTTTCTTTGGAGGAGAAGGAAAGATGATG
EX906352       <-- CTTCATTTTCTT-TTCACTGTTTTTCTTTGGAGGAGAAGGAAAGATGATG
EY949287       <-- CTTCATTTTCTT-TTCACTGTTTTTCTTTGGAGGAGAAGGAAAG......
FD946808       <-- CTTCATTTTCTT-TTCACTGTTTTTCTTTGGAGGAGAAGGAAAGATGATG
FD963281       <-- ..................................................
FD972255       <-- CTTCATTTTCTT-TTCACTGTTTTTCTTTGGAGGAGAAGGAAAGATGATG
FY429626       --> ..................................................
EV541880       --> ..................................................
FD959634       --> ..................................................
EV542583       --> ..................................................
FY429433       --> ..................................................
FD968172       --> ..................................................
FY437201       --> ..................................................
FD536899       --> ..................................................
EW738427       --> ..................................................
EX767033       --> ..................................................
EV572590       --> ..................................................
FY446258       --> ..................................................

               1701   -   1751
UN21659        --> AAAGATGTGAT..
                   ~~~~~~~~~~~~~
EV550733       <-- .............
FY439615       <-- .............
EV551166       <-- .............
EV537698       <-- .............
FD979368       <-- .............
FY449127       <-- .............
FY453570       <-- .............
EV538615       <-- .............
EV548983       <-- .............
FY429164       <-- .............
FY438847       <-- .............
FY449259       <-- .............
FY447983       <-- .............
EW723416       <-- AAAGATcc.....
FD543233       <-- .............
FY450904       <-- .............
EW734607       <-- .............
FD969935       <-- AAAGATGTGATcc
FD540384       <-- AAAGATaccc...
EX888720       <-- AAAGATacgatcc
FD559434       <-- AAAGATacgatcc
FD534454       <-- .............
EW726271       <-- AAAGATcc.....
EX906352       <-- AAAGATacct...
EY949287       <-- .............
FD946808       <-- AAAGATcc.....
FD963281       <-- .............
FD972255       <-- AAAGATacgatcc
FY429626       --> .............
EV541880       --> .............
FD959634       --> .............
EV542583       --> .............
FY429433       --> .............
FD968172       --> .............
FY437201       --> .............
FD536899       --> .............
EW738427       --> .............
EX767033       --> .............
EV572590       --> .............
FY446258       --> .............