Library    |     Search    |     Batch query    |     SNP    |     SSR  

Alignment for radish unigene UN21667

               1      -     51
UN21667        --> GGGAAAAGTACCGAAATGTTCTTTCAAAAGAAAAAGATAACTACCGAGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX755565       <-- ..................................................
FD560053       <-- ..................................................
EY935574       --> GGGAAAAGTACCGAAATGTTCTTTCAAAAGAAAAAGATAACTACCGAGAT
FD555674       --> gaGAAAAGTACCGAAATGTTCTTTGAAAAGAAAAAGATAACTACCGAGAT
FD944624       --> ....gAAGTACCGAAATGTTCTTTCAAAAGAAAAAGATAACTACCGAGAT
EX777698       --> ........................ggAAAGAAAAAGATAACTACCGAGAT
EV531034       --> ..................................................
EX759618       --> ..................................................
EY893198       --> ..................................................
EX767694       --> ..................................................

               51     -    101
UN21667        --> GTTGGAACTCTTATCACCTTATGAATTAAATAAAGGTGTAAAGTAGCAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX755565       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD560053       <-- ..................................................  Raphanus raphanistrum subsp. landra
EY935574       --> GTTGGAACTCTTATCACCTTATAAATTAAATAAAGGTGTAAAGTAGCAAC  Raphanus sativus cv Early Scarlet Globe
FD555674       --> GTTGGAACTCTTATCACCTTATGAATTAAATAAGGGTGTAAAGTAGCAAC  Raphanus raphanistrum subsp. landra
FD944624       --> GTTGGAACTCTTATCACCTTATAAATTAAATAAAGGTGTAAAGTAGCAAC  Raphanus sativus cv Early Scarlet Globe
EX777698       --> GTTGGAACTCTTATCACCTTATGAATTAAATAAAGGTGTAAAGTAGCAAC  Raphanus raphanistrum subsp. landra
EV531034       --> ...GGAACTCTTATCACCTTATAAATTAAATAAAGGTGTAAAGTAGCAAC  Raphanus raphanistrum subsp. maritimus
EX759618       --> ...GGAACTCTTATCACCTTATGAATTAAATAAAGGTGTAAAGTAGCAAC  Raphanus raphanistrum subsp. raphanistrum (MS)
EY893198       --> cgtaGAACTCTTATCACCTTATGCATTAAATAAAGGTGTAAAGTAGCAAC  Raphanus raphanistrum subsp. maritimus
EX767694       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)

               101    -    151
UN21667        --> ACAACAATAAGTAGATAAAACGTAAAAATTAAATTAAATTAAACCTAACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX755565       <-- ......................................TTAAACCTAACA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD560053       <-- ................................................CA  Raphanus raphanistrum subsp. landra
EY935574       --> ACAACAATAAGTAGATAAAACCTAAAAATTAAATTAAATTAAACCTAACA  Raphanus sativus cv Early Scarlet Globe
FD555674       --> ACAACAATAAGTAGATAAAACGTAAAAATTAAATTAAATTAAACCTAACA  Raphanus raphanistrum subsp. landra
FD944624       --> ACAACAATAAGTAGATAAAACCTAAAAATTAAATTAAATTAAACCTAACA  Raphanus sativus cv Early Scarlet Globe
EX777698       --> ACAACAATAAGTAGATAAAACGTAAAAATTAAATTAGATTAAACCTAACA  Raphanus raphanistrum subsp. landra
EV531034       --> ACAACAATAAGTAGATAAAACCTAAAAATTAAATTAAATTAAACCTAACA  Raphanus raphanistrum subsp. maritimus
EX759618       --> ACAACAATAAGTAGATAAAACGTAAAAATTAAATTAAATTAAACCTAACA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY893198       --> ACAAAAATAAGTAGATAAAACGTAAAAATTAAATTAAA-----CCTAACA  Raphanus raphanistrum subsp. maritimus
EX767694       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)

               151    -    201
UN21667        --> AAAGAACACGAAATACTAATCTTATTATTAGAAAGAGATGAGTAAAAAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX755565       <-- AAA-AACATGAAATACTAATCTTAT-ATTAGAAAGAGATGAGTAAAAAA-  Raphanus raphanistrum subsp. raphanistrum (MS)
FD560053       <-- AAAGAACACGAAATACTAATCCTATTATTAGAAAGAGATGAGTAAAAAGA  Raphanus raphanistrum subsp. landra
EY935574       --> AAAGAACACGAAATACTAATCTTATTATTAGAAAGAGATGAGTAAAAAAA  Raphanus sativus cv Early Scarlet Globe
FD555674       --> AAAGAACACGAAATACTAATCCTATTATTAGAAAGAGATGAGTAAAAAGA  Raphanus raphanistrum subsp. landra
FD944624       --> AAAGAACACGAAATACTAATCTTATTATTAGAAAGAGATGAGTAAAAAAA  Raphanus sativus cv Early Scarlet Globe
EX777698       --> AAAGAACACGAAATACTAATCTTATTATTAAAAAGAGATGAGTAAAAAGA  Raphanus raphanistrum subsp. landra
EV531034       --> AAAGAACACGAAATACTAATCTTATTATTAGAAAGAGATGAGTAAAAAAA  Raphanus raphanistrum subsp. maritimus
EX759618       --> AAAAAACATGAAATACTAATCTTATTATTAGAAAGAGATGAGTAAAAAAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY893198       --> AAAGAACACGAAATACTAATCTTATTATTAGAAAGAGATGAGTAAAAAGA  Raphanus raphanistrum subsp. maritimus
EX767694       --> ....AACATGAAATACTAATCTTATTATTAGAAAGAGATGAGTAAAAAAA  Raphanus raphanistrum subsp. raphanistrum (NY)

               201    -    251
UN21667        --> AAAA--CTGAAACATTCTTGAGTCGTTGAAACTGTCTATTCCTCCTCCGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX755565       <-- --AA--CTGAAACATTCTTGAGTCGTTGAAACTGTCTATTCTTCCTCCGG
FD560053       <-- AAAA--CTGAAACATTCTTGAGTCGTTGAAACTTTCTATTCCTCCTCCGG
EY935574       --> AA----CTGAATCATTCTTGAGTCGTTGAAACTGTCTATTCCTCTTCCGG
FD555674       --> AAAA--CTGAAACATTCTTGAGTCGTTGAAACTTTCTATTCCTCCTCCGG
FD944624       --> AAAA-ACTGAATCATTCTTGAGTCGTTGAAACTGTCTATTCCTCTTCCGG
EX777698       --> AAAG--CTGAAACATTCTTGAGTCGTTGAAACTTTCTATTCCTCCTCCGG
EV531034       --> AAAAAACTGAATCATTCTTGAGTCGTTGAAACTGTCTATTCCTCTTCCGG
EX759618       --> AA----CTGAAACATTCTTGAGTCGTTGAAACTGTCTATTCTTCCTCCGG
EY893198       --> AAAA--CTGAAACATTCTTGAGTTGTTGAAACTGTCTATTCCTCCTCCGG
EX767694       --> AAAA-ACTGAAACATTCTTGAGTCGTTGAAACTGTCTATTCTTCCTCCGA

               251    -    301
UN21667        --> CAAGAAGTGTCTGTTCTTCACCCAAAGAGAGTCGGCGATAACCGGCTCAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX755565       <-- CAAGAAGTGTCTGTTCTTCACCCAAAGAGAGTCGGCGATAACCGGCTCAT
FD560053       <-- CAAGAAGTGTCTGTTCTTCACCCAAAGAGAGTCGGCGATAACCGGCTCAT
EY935574       --> CAAGAAGTGTCTGTTCTTCACCCAAAGAGAGTCGGCGATAACCGGCTCAT
FD555674       --> CAAGAAGTGTCTGTTCTTCACCCAAAGAGAGTCGGCGATAACCGGCTCAT
FD944624       --> CAAGAAGTGTCTGTTCTTCACCCAAAGAGAGTCGGCGATAACCGGCTCAT
EX777698       --> CAAGAAGTGTCTGTTCTTCCCCCAAAGAGAGTCGGCGATAACCGGCTCAT
EV531034       --> CAAGAAGTGTCTGTTCTTCACCCAAAGAGAGTCGGCGATAACCGGCTCAT
EX759618       --> CAAGAAGTGTCTGTTCTTCACCCAAAGAGAGTCGGCGATAACCGGCTCAT
EY893198       --> CAAGAAGTGCCTGTTCTTCACCCAAAGAGAGTCGGCGATAACCGGCTCAT
EX767694       --> CAAGAAGTGTCTGTTCTTCACCCAAAGAGAGTCGGCGATAATCGGCTCAT

               301    -    351
UN21667        --> TGTCTTGGTTCCTATGCCAAGTGTAAAGCGCGTGAGTCATGTTCTTTATT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX755565       <-- TGTCTTGGTTCCTATGCCAAGTGTAAAGCGCGTGAGTCCTGTTCTTTATT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD560053       <-- TGTCTTGGTTCCTATGCCAAGTGTAAAGCGCATGAGTCATGTTCTTTATT  Raphanus raphanistrum subsp. landra
EY935574       --> TGTCTTGGTTCCTATGCCAAGTGTAAAGCGCGTGAGTCTTGCTCTTTATT  Raphanus sativus cv Early Scarlet Globe
FD555674       --> TGTCTTGGTTCCTATGCCAAGTGTAAAGCGCATGAGTCATGTTCTTTATT  Raphanus raphanistrum subsp. landra
FD944624       --> TGTCTTGGTTCCTATGCCAAGTGTAAAGCGCGTGAGTCTTGTTCTTTATT  Raphanus sativus cv Early Scarlet Globe
EX777698       --> TGTCTTGGTTCCTATGCCAAGTGTAAAGCGCATGAGTCATGTTCTTTATT  Raphanus raphanistrum subsp. landra
EV531034       --> TGTCTTGGTTCCTATGCCAAGTGTAAAGCGCGTGAGTCTTGTTCTTTATT  Raphanus raphanistrum subsp. maritimus
EX759618       --> TGTCTTGGTTCCTATGCCAAGTGTAAAGCGCGTGAGTCCTGTTCTTTATT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY893198       --> TGTCTTGGTTCCTATGCCAAGTGTAAAGCGCGTGAGTCCTGTTCTTTATT  Raphanus raphanistrum subsp. maritimus
EX767694       --> TGTCTTGGTTCCTATGCCAAGTGTAAAGCGCGTGAGTCATGTTCTTTATT  Raphanus raphanistrum subsp. raphanistrum (NY)

               351    -    401
UN21667        --> TCTAGAAGAGCATGTCCAAAACTAGCCTCTCTATACGCTGAGTAACTCGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX755565       <-- TCTAGAAGAGCATGTCCAAAACTAGCCTCTCTATATGCTGAGTAACTCGG
FD560053       <-- TCTAGAAGAGCATGTCCAAAACTAGCCTCTCTATACGCTGAGTAACTCGG
EY935574       --> TCTAGAAGAGCATGTCCAAAACTAGCCTCTCTATACGCTGAGTAACTCGG
FD555674       --> TCTAGAAGAGCATGTCCAAAACTAGCCTCTCTATACGCTGAGTAACTCGG
FD944624       --> TCTAGAAGAGCATGTCCAAAACTAGCCTCTCTATACGCTGAGTAACTCGG
EX777698       --> TCTAGAAGAGCATGTCCAAAACTAGCCTCTCTATACGCTGAGTAACTCGG
EV531034       --> TCTAGAAGAGCATGTCCAAAACTAGCCTCTCTATACGCTGAGTAACTCGG
EX759618       --> TCTAGAAGAGCATGTCCAAAACTAGCCTCTCTATATGCTGAGTAACTCGG
EY893198       --> TCTAGAAGAGCATGTCCAAAACTAGCCTCTCTATACGCTGAGTAACTCGG
EX767694       --> TCTAGAAGAGCATGTCCAAAACTAGCCTCTCTATATGCTGAGTAACTCGG

               401    -    451
UN21667        --> TTGAGGGTACGTGTAATCGTTAGCGATTCCTTCTATGTTGCCACCATCAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX755565       <-- TTGAGGGTACGTGTAATCGTTAGCGATTCCTTCTATGTTGCCACCATCAC
FD560053       <-- TTGAGGGTACGTGTAATCGTTAGCGATTCCTTCTATGTTGCCACCATCAC
EY935574       --> TTGAGGGTACGTATAATCGTTAGCGATTCCTTCTATGTTGCCACCATCAC
FD555674       --> TTGAGGGTACGTGTAATCGTTAGCGATTCCTTCTATGTTGCCACCATCAC
FD944624       --> TTGAGGGTATGTGTAATCGTTAGCGATTCCTTCTATGTTGCCACCATCAC
EX777698       --> TTGAGGGTACGTGTAATCGTTAGCGATTTCTTCTATGTTGCCACCATCAC
EV531034       --> TTGAGGGTATGTGTAATCGTTAGCGATTCCTTCTATGTTGCCACCATCAC
EX759618       --> TTGAGGGTACGTGTAATCGTTAGCGATTCCTTCTATGTTGCCACCATCAC
EY893198       --> TTGAGGGTAGGTGTAATCGTTAGCGATTCCTTCTATGTTGCCACCATCAC
EX767694       --> TTGAGGGTACGTGTAATCGTTAGCGATTCCTTCTATGTTGCCACCATCAC

               451    -    501
UN21667        --> CAATGGTGATGTAAATTGGAGCAGATTGATCTTTCACAGGAGAACTCAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX755565       <-- CAATGGTGATGTAAATTGGAGCAGATTGATCTTTCACGGGAGAACTCAAA
FD560053       <-- CAATGGTGATGTAAATTGGAGCAGATTGATCTTTCACAGGAGAACCCAAA
EY935574       --> CAATGGTGATGTAAATTGGAGCAGATTGATCTTTCACAGGAGAACTCAAA
FD555674       --> CAATGGTGATGTAAATTGGAGCAGATTGATCTTTCACAGGAGAACCCAAA
FD944624       --> CAATGGTGATGTAAATTGGAGCAGATTGATCTTTCACAGGAGAACTCAAA
EX777698       --> CAATGGTGATGTAAATTGGAGCAGATTGATCTTTCACAGGAAAACCCAAA
EV531034       --> CAATGGTGATGTAAATTGGAGCAAATTGATCTTTCACAGGAGAACTCAAA
EX759618       --> CAATGGTGATGTAAATTGGAGCAGATTGATCTTTCACGGGAGAACTCAAA
EY893198       --> CAATGGTGATGTAA-TTGGAGCAGATTGATCTTTCACAGGAGAACTCAAA
EX767694       --> CAATGGTGATGTAAATTGGAGCAAATTGATCTTTCACGGGAGAACTCAA-

               501    -    551
UN21667        --> CCATCAGTGATATTGTACTTAATGTTGGAGACACGTTCTGATCGCTCGTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX755565       <-- CCATCAGTGATATTGTACTTAATGTTGGAGACACGTTCTGATCGCTCGTA
FD560053       <-- CCATCAGTGATATTGTACTTAATGTTGGAGACACGTTCTGATCGCTCGTA
EY935574       --> CCATCAGTGATATTGTAGTTAATGTTGGAGACACGTTCTGATCGCTCGTA
FD555674       --> CCATCAGTGATATTGTACTTAATGTTGGAGACACGTTCTGATCGCTCGTA
FD944624       --> CCATCAGTGATATTGTAGTTAATATTGGAGACACGTTCTGATCGCTCGTA
EX777698       --> CCATCAGTGATATTGTACTTAATGTTGGAGACACGTTCTGATCGCTC...
EV531034       --> CCATCAGTGATATTGTAGTTAATGTTGGAGACACGTTCTGATCGCTCGTA
EX759618       --> CCATCAGTGATATTGTACTTAATGTTGGAGACACGTTCTGATCGCTCGTA
EY893198       --> CCATCAGTGATATTGTACTTAATGTTGGAGACACGTTCTGATCGCTCGTA
EX767694       --> CCATCAGTGATATTGTACTTAATGTTGGAGACACGTTCTGATCGCTCGTA

               551    -    601
UN21667        --> GGCATGAACATGACCAGCAAAGACAATATCAACTTTGTTTTGGACGAACC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX755565       <-- GGCATGAACATGACCAGCGAAGACAATATCAACTTTGTTTTGGACGAACC
FD560053       <-- GGCATGAACATGACCAGCAAAGACAATATCAACTTTGTTTTGGACAAACC
EY935574       --> GGCATGAACATGACCAGCAAAGACAATATCAACTTTGTTTTGGACGAACC
FD555674       --> GGCATGAACATGACCAGCAAAGACAATATCAACTTTGTTTTGGACAAACC
FD944624       --> GGCATGAACATGACCAGCAAAGACAATATCAACTTTGTTTTGGACGAAAC
EX777698       --> ..................................................
EV531034       --> GGCATGAACATGACCAGCAAAGACAATATCAACTTTGTTTTGGACGAACC
EX759618       --> GGCATGAACATGACCAGCGAAGACAATATCAACTTTGTTTTGGACGAACC
EY893198       --> GGCATGAACATGACCAGCAAAGACAATATCAACTTTGTTTTGGACGAACC
EX767694       --> GGCATGAACATGACCAGCGAAGACAATATCAACTTTGTTTTGGACGAACC

               601    -    651
UN21667        --> ATGGCTCAAACGTGACTCTCATGCTTTCACCTTCCATGTAGTGATAACCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX755565       <-- ATGGCTCAAACGTGACTCTCATGCTTTCACCTTCCATGTAGTGATAACCG
FD560053       <-- ATGGCTCAAACGTGACTCTCATACTTTCACCTTCCATGTAGTGATAACCG
EY935574       --> ATGGCTCAAACGTGACTCTCATGCTTTCACCTTCCATGTAGTGATAACCG
FD555674       --> ATGGCTCAAACGTGACTCTCATACTTTCACCTTCCATGTAGTGATAACCG
FD944624       --> ATGGCTCAAACGTGACTCTCATGCTTTCACCTTCCATGTAGTGATAACCG
EX777698       --> ..................................................
EV531034       --> ATGGCTCAAACGTGACTCTCATGCTTTCACCTTCCATGTAGTGGTAACCG
EX759618       --> ATGGCTCAAACGTGACTCTCATGCTTTCACCTTCCATGTAGTGATAACCG
EY893198       --> ATGGCTCAAACGTGACTCTCATGCTTTCACCTTCCATGTAGTGATAACCG
EX767694       --> ATGGCTCAAACGTGACTCTCATGCTTTCACCTTCCATGTAGTGATAACCG

               651    -    701
UN21667        --> TTGCTGTTGTACCACGGCGAGTGAACCAGAACAATCAGCCATGGAGTCTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX755565       <-- TTGCTGTTGTACCACGGCGAGTGAACCAGAACAATCAGCCATGGAGTCTC
FD560053       <-- TTGCTGTTGTACCACGGCGAGTGAACCAGAACAATAAGCCATGGAGTCTG
EY935574       --> TTGCTGTTGTACCACGGCGAGTGAACCAGAACAATCAGC...........
FD555674       --> TTGCTGTTGTACCACGGCGAGTGA..........................
FD944624       --> TTGCTGTTGTACCACGGCGAGTGAACCAGAACAATCAGCCATGGAGTCTC
EX777698       --> ..................................................
EV531034       --> TTGCTGTTGTACCACGGCGAGTGAACCAGAACAATCAGCCATGGAGTCTC
EX759618       --> TTGCTGTTGTACCACGGCGAGTGAACCAGAACAATCAGCCATGGAGTCTC
EY893198       --> TTGCTGTTGTACCATGGCGAGTGAACCAGAACAATCAGCCATGGAGTCTC
EX767694       --> TTGCTGTTGTACCACGGCGAGTGAACCAGAACAATCAGCCATGGAGTCTC

               701    -    751
UN21667        --> CTCTCTGTTTACTTTCTTCAGTTCACTCTCGAGCCACGAGTTTTGAGGTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX755565       <-- CTCTCTGTTTACTTTCTTCAGTTCACTCTCGAGCCACGAGTTTTGAGGTG
FD560053       <-- CTCTCTGTTTACTTTCTTCAGTTCACTCTCGAGCCACGAGTTTTGAGGTG
EY935574       --> ..................................................
FD555674       --> ..................................................
FD944624       --> CTCTCTGTTTACTTTCTTCAGTTCACTCTCGAGCCACGAGTTTTGAGGTG
EX777698       --> ..................................................
EV531034       --> CTCTCTGTTTACTTTCTTCAGTTCACTCTCGAGCCACGAGTTTTGAGGTG
EX759618       --> CTCTCTGTTTACTTTCTTCAGTTCACTCTCGAGCCACGAGTTTT......
EY893198       --> CTCTCTGTTTACTTTTTTCAGTTCACTCTCGAGCCACGAGTTTTGAGGTG
EX767694       --> CTCTCTGTTTACTTTCTTCAGTTCACTCTCGAGCCACGAGTTTTGAGGTG

               751    -    801
UN21667        --> TGTACTTGTCAAAAGCTGAGTAAGAGGAGAGCACGATGATGTACGCTGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX755565       <-- TGTACTTGTCAAAAGCTGAGTAAGAGGAGAGCACGATGATGTACGCTGAG
FD560053       <-- TGTACTTGTCAAAAGCTGAGTAAGAGGc......................
EY935574       --> ..................................................
FD555674       --> ..................................................
FD944624       --> TGTACTTG..........................................
EX777698       --> ..................................................
EV531034       --> TGTACTTGTCAAAAGCTGAGTAAGAGGAGAGCACGATGATGTACGCTGAG
EX759618       --> ..................................................
EY893198       --> TGTACTTGTCAAAATCTGAGTAAGAGGAGAGCACGATGATGTACGCTGAG
EX767694       --> TGTACTTGTCAAAAGCTGAGTAAGAGGAGAGCACGATGATGTACGCTGAG

               801    -    851
UN21667        --> GCTCGTTTAATTGAGTACCAAAGCGGAGAAGTGCTCTTTGAGGCTCTGTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX755565       <-- GCTCGTTTAATTGAGTACCAAAGCGGAGAAGTGCTCATTGAGGCTCTGTA
FD560053       <-- ..................................................
EY935574       --> ..................................................
FD555674       --> ..................................................
FD944624       --> ..................................................
EX777698       --> ..................................................
EV531034       --> GCTCG.............................................
EX759618       --> ..................................................
EY893198       --> GCTCGTTTAATTGAGTACCAAAGCGGAGAAGTGCTCTT............
EX767694       --> GCTCGTTTAATTGAGTACCAAAGCGGAGAAGTGCTCTTTGAGGCTCTGTA

               851    -    901
UN21667        --> TGGAACGTGGTAACGGTTTTTGTATGGCTTGAATGCCTGAGTCTCGCCTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX755565       <-- TGGAACGTGGTAACGGTTTTTGTATGGCTTcc..................
FD560053       <-- ..................................................
EY935574       --> ..................................................
FD555674       --> ..................................................
FD944624       --> ..................................................
EX777698       --> ..................................................
EV531034       --> ..................................................
EX759618       --> ..................................................
EY893198       --> ..................................................
EX767694       --> CGGAACGTGGTAACGGTTTTTGTATGGCTTGAATGCCTGAGTCTCGCCTA

               901    -    951
UN21667        --> TTGACG
                   ~~~~~~
EX755565       <-- ......
FD560053       <-- ......
EY935574       --> ......
FD555674       --> ......
FD944624       --> ......
EX777698       --> ......
EV531034       --> ......
EX759618       --> ......
EY893198       --> ......
EX767694       --> TTGACG