Library    |     Search    |     Batch query    |     SNP    |     SSR  

Alignment for radish unigene UN21668

               1      -     51
UN21668        --> CGAAGCCATGGTTAATACGGAGCTAGTAAAATATTGGGAAACTGTAT-AA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV566684       <-- ..................................................
FD989329       <-- ..................................................
FD536218       <-- ..................................................
EY899917       <-- ..................................................
EX747142       <-- ..................................................
EY913981       <-- ..................................................
EY922470       <-- ..................................................
EY926584       --> CGAAGCCATGGTTAATACGGAGCTAGTAAAATATTGGGAAACTGTAT-AA
FD531728       --> .............AATACGGAGCTAGTAAAATATTGGGAAACTGTAT-AA
EY918429       --> ...........................AAAATATTGGGAAACTGTAT-AA
EY910119       --> ...................................GGGAAACTGTATTAA
EW719830       --> ...........................................GTAT-AA

               51     -    101
UN21668        --> CCTT-AGCTAAGGTTGATGTTGTTCTCGTAAAAAAA-CAAAACATCAAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV566684       <-- .....................................CAAAACATCAAAT
FD989329       <-- ..................................................
FD536218       <-- ..................................................
EY899917       <-- ..................................................
EX747142       <-- ..................................................
EY913981       <-- ..................................................
EY922470       <-- ..................................................
EY926584       --> CCTT-AGCTAAGGTTGATGTTGTTCTCGTAAAAAAA-CAAAACATCAAAT
FD531728       --> CCTT-AGCTAAGGTTGATGTTGTTCTCGTAAAAAAAACAAAACATCAAAT
EY918429       --> CCTT-AGCTAAGGTTGATGTTGTTCTCGTAAAAAAAACAAAACATCAAAT
EY910119       --> CCTTTAGCTAAGGTTGATGCTGTTCTCGTAAAAAAA-CAAAACATCAAAT
EW719830       --> CCTT-TGCTAAGGTTGATGTTGTTCTCGTAAAAAAA-CAAAACATCAAAT

               101    -    151
UN21668        --> ATTTGAAAACAGATGACTAAGGTTGAGATCCGGACAAAAGCTCCATAAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV566684       <-- ATTTGAAAACAGATGACTAAGGTTGAGATCCGGACAAAAGCTCCATAAAA
FD989329       <-- ..............................................aaag
FD536218       <-- ..................................................
EY899917       <-- ..................................................
EX747142       <-- ..................................................
EY913981       <-- ..................................................
EY922470       <-- ..................................................
EY926584       --> ATTTGAAAACAGATGACTAAGGTTGAGATCCAGACAAAAGCTCCATAAAA
FD531728       --> ATTTGAAAACAGATGACTAAGGTTGAGATCCGGACAAAAGCTCCATAAAA
EY918429       --> ATTTGAAAACAGATGACTAAGGTTGAAATCCGGACAAAAGCTCCATAAAA
EY910119       --> ATTTGAAAACAGATGACTAAGGTTGAGATCCGGACAAAAGCTCCATAAAA
EW719830       --> ATTTGAAAACAGATGACTAAGGTTGAGATCCAGACAAAAGCTCCATAAAA

               151    -    201
UN21668        --> GTTTAGAGACA--TAAAAAA-GGAGATCTCCTCCAGAATGATTGATTCAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV566684       <-- GTTTAGAGACACATAAAAAA-GGAGATCTCCTCCAGAATGATTGATTCAC
FD989329       <-- ttagAGACACA--TAAAAAA-GGAGATCTC-TCCAGAATGATTGATTCAC
FD536218       <-- ...............AAAAA-GGAGATCTCCTCCAGAATGATTGATTCAC
EY899917       <-- ..........................TCTCCTCCAGAATGATTGATTCAC
EX747142       <-- ......................................gatgatgaTCAC
EY913981       <-- ..................................................
EY922470       <-- ..................................................
EY926584       --> GTTTAGGGACA--TAAAAAA-GGAGATCTCCTCCAGAATGATTGATTCAC
FD531728       --> GTTTAGAGACACATAAAAAA-GGAGATCTCCTCCAGAATGATTGATTCAC
EY918429       --> GTTTAAAGACA--TAAAAAAAGGAAATCTCCTCCAGAATGATTGATTCAC
EY910119       --> GTTTAGAGACACATAAAAAA-GGAGATCTCCTCCAGAGTGATTGATTCAC
EW719830       --> GTTTAGAGACA--TAAAAAA-GGAGATCTCCTCCAGAATGATTGATTCAC

               201    -    251
UN21668        --> ACGACATTTGACTTCGTTCCTCAATCTAGTCGTTCCATCTTCCAGAGACC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV566684       <-- ACGACATTTGACTTCGTTCCTCAATCTAGTCGTTCCATCTTCCAGAGACC
FD989329       <-- ACGACATTTGACTTCGT-CCTCAATCTAGTCGTTCCATCTTCCAGAGAC-
FD536218       <-- ACGACATTTGACTTCGT-CCTCAATCTAGTCGTTCCATCTTCCAGAGAC-
EY899917       <-- ACGACATTTGACTTCGTTCCTCAATCTAGTCGTTCCATCTTCCAGAGAC-
EX747142       <-- ACGACATTTGACT-CG-TCCTC-ATCTAGTCGTTCCATCTTCCAGAGAC-
EY913981       <-- ..................................................
EY922470       <-- ..................................................
EY926584       --> ACGACATTTGACTTCGTTCCTCAATCTAGTCGTTCCATCTTCCAAAGACC
FD531728       --> ACGACATTTGACTTCGTTCCTCAATCTAGTCGTTCCATCTTCCAGAGACC
EY918429       --> ACGACATTTGACTTCGTTCCTCAATCTAGTCGTTCCATCTTCCAAAAACC
EY910119       --> ACGACAGTTGACTTCGTTCCTCAATCTAGTCGTTCCATCTTCCAGAGACC
EW719830       --> ACGACATTTGACTTCGTTCCTCAATCTAGTCGTTCCATCTTCCAGAGACC

               251    -    301
UN21668        --> GTCGTTGAGGTAATGCATGTTGTCCACTCCGATTCCTTTGTTGATGCTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV566684       <-- GTCGTTGAGGTAATGCATGTTGTCCACTCCGATTCCTTTGTTGATGCTCT
FD989329       <-- GTCGTTGAGGTAATGCATGTTGTCCACTCCGATTC-TTTGTTGATGCTCT
FD536218       <-- GTCGTTGAGGTAATGCATGTTGTCCACTCCGATTCCTTTGTTGATGCTCT
EY899917       <-- GTCGTTGAGGTAATGCATGTTGTCCACTCCGATTCCTTTGTTGATGCTCT
EX747142       <-- GTCGTTGAGGTAATGCATGTTGTCCACTCCGATTCCTTTGTTGATGCTCT
EY913981       <-- ..CGTTGAGATAATGCATGTTGTCCACTCCGATTCCTTTGTTGATGCTCT
EY922470       <-- .......................................GTTGATGCTCT
EY926584       --> GTCGTTGAGGTAATGCATGTTGTCCACTCCGATTCCTTTGTTGATGCTCT
FD531728       --> GTCGTTGAGGTAATGCATGTTGTCCACTCCGATTCCTTTGTTGATGCTCT
EY918429       --> GTCGTTGAGGTAATGCATGTTGTCCACTCCGATTCCTTTGTTGATGCTCT
EY910119       --> GTCGTTGAGATAATGCATGTTGTCCACTCCGATTCCTTTGTTGATGCTCT
EW719830       --> GTCGTTGAGGTAATGCATGTTGTCCACTCCGATTCCTTTGTTGATGCTCT

               301    -    351
UN21668        --> TAATGTCCTTGGCTGACATTTTGGTGAAGCCTATTGCTAAGGCATGCTGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV566684       <-- TAATGTCCTTGGCTGACATTTTGGTGAAGCCTATTGCTAAGGCATGCTGC
FD989329       <-- TAATGTCCTTGGCTGACATTTTGGTGAAGCCTATTGCTAAGGCATGCTGC
FD536218       <-- TAATGTCCTTGGCTGACATTTTGGTGAAGCCTATTGCTAAGGCATGCTGC
EY899917       <-- TAATGTCCTTGGCTGACATTTTGGCGAAGCCTATTGCTAAGGCATGCTGC
EX747142       <-- TAATGTCCTTGGCTGACATTTTGGTGAAGCCTATTGCTAAGGCATGCTGC
EY913981       <-- TAATGTCCTTGGCTGACATTTTGGTGAAGCCTATTGCTAAGGCATGCTGC
EY922470       <-- TAATGTCCTTGGCTGACATTTTGGTGAAGCCTATTGCTAAGGCATGCTGC
EY926584       --> TAATGTCCTTGGCTGACATTTTGGTGAAGCCTATTGCTAAGGCATGCTGC
FD531728       --> TAATGTCCTTGGCTGACATTTTGGTGAAGCCTATTGCTAAGGCATGCTGC
EY918429       --> TAATGTCCTTGGCTGACATTTTGGTGAAGCCTATTGCTAAGGCATGCTGC
EY910119       --> TAATGTCCTTGGCTGACATTTTGGTGAAGCCTATTGCTAAGGCATGCTGC
EW719830       --> TAATGTCCTTGGCTGACATTTTGGTGAAGCCTATTGCTAAGGCATGCTGC

               351    -    401
UN21668        --> TTTCCTTCTGCATATATAGCCACAGGCCTTTCTGCCTCAACTTCTTCATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV566684       <-- TTTCCTTCTGCATATATAGCCACAGGCCTTTCTGCCTCAACTTCTTCATC
FD989329       <-- TTTCCTTCTGCATATATAGCCACAGGCCTTTCTGCCTCAACTTCTTCATC
FD536218       <-- TTTCCTTCTGCATATATAGCCACAGGCCTTTCTGCCTCAACTTCTTCATC
EY899917       <-- TTTCCTTCTGCATATATAGCCACAGGCCTTTCTGCCTCAACTTCTTCATC
EX747142       <-- TTTCCTTCTGCATATATAGCCACAGGCCTTTCTGCCTCAACTTCTTCATC
EY913981       <-- TTTCCTTCTGCATATATAGCCACTGGCCTTTCTGCCTCAACTTCTTCATC
EY922470       <-- TTTCCTTCTGCATATATAGCCACAGGCCTTTCTGCCTCAACTTCTTCATC
EY926584       --> TTTCCTTCTGCATATATAGCCACAGGCCTTTCTGCCTCAACTTCTTCATC
FD531728       --> TTTCCTTCTGCATATATAGCCACAGGCCTTTCTGCCTCAACTTCTTCATC
EY918429       --> TTTCCTTCTGCATATATAGCCACAGGCCTTTCTGCCTCAACTTCTTCATC
EY910119       --> TTTCCTTCTGCATATATAGCCACTGGCCTTTCTGCCTCAACTTCTTCATC
EW719830       --> TTTCCTTCTGCATATATAGCCACAGGCCTTTCTGCCTCAACTTCTTCATC

               401    -    451
UN21668        --> CAGAACACCTCCAGGAGATGTGAGACCAGGACACATTATGTTGGCACCAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV566684       <-- CAGAACACCTCCAGGAGATGTGAGACCAGGACACATTATGTTGGCACCAG  Raphanus raphanistrum subsp. landra
FD989329       <-- CAGAACACCTCCAGGAGATGTGAGACCAGGACACATTATGTTGGCACCAG  Raphanus raphanistrum subsp. landra
FD536218       <-- CAGAACACCTCCAGGAGATGTGAGACCAGGACACATTATGTTGGCACCAG  Raphanus raphanistrum subsp. maritimus
EY899917       <-- CAGAACACCTCCAGGAGATGTGAGACCAGGACACATTATGTTGGCACCAG  Raphanus raphanistrum subsp. maritimus
EX747142       <-- CAGAACACCTCCAGGAGATGTGAGACCAGGACACATTATGTTGGCACCAG  Raphanus raphanistrum subsp. maritimus
EY913981       <-- CAGAACACCTCCAGGGGATGTGAGACCAGGACACATTATGTTGGCACCAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY922470       <-- CAGAACGCCTCCAGGGGATGTGAGACCAGGACACATTATGTTTGCACCAG  Raphanus raphanistrum subsp. landra
EY926584       --> CAGAACACCTCCAGGAGATGTGAGACCAGGACACATTATGTTGGCACCAG  Raphanus sativus var. oleiformis
FD531728       --> CAGAACACCTCCAGGAGATGTGAGACCAGGACACATTATGTTGGCACCAG  Raphanus raphanistrum subsp. maritimus
EY918429       --> CAGAACGCCTCCAGGGGATGTGAGACCAGGACACATTATGTTt.......  Raphanus raphanistrum subsp. landra
EY910119       --> CAGAACACCTCCAGGGGATGTGAGACCAGGACACATTATGTTGGCACCAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EW719830       --> CAGAACACCTCCAGGAGATGTGAGACCAGGACACATTATGTTGGCACCAG  Raphanus sativus var. oleiformis

               451    -    501
UN21668        --> AGAAAACAAACTTTATAGCACCTCTATCAACTTGAAACCTCTTCATTATA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV566684       <-- AGAAAACAAACTTTATAGCACCTCTATCAACTTGAAACCTCTTCATTATA
FD989329       <-- AGAAAACAAACTTTATAGCACGTCTATCAACTTGAAACCTCTTCATTATA
FD536218       <-- AGAAAACAAACTTTATAGCACCTCTATCAACTTGAAACCTCTTCATTATA
EY899917       <-- AGAAAACAAACTTTATAGCACCTCTATCAACTTGAAACCTCTTCATTATA
EX747142       <-- AGAAAACAAACTTTATAGCACCTCTATCAACTTGAAACCTCTTCATTATA
EY913981       <-- AGAAAACAAACTTTATGGCACCTCTATCAACTTGAAACCTCTTCATTATA
EY922470       <-- AGAAAACAAACTTTATGGCACCTCTATCAACTTGAAACCTCTTCATTATA
EY926584       --> AGAAAACAAACTTTATAGCACCTCTATCAACTTGAAACCTCTTCATTATA
FD531728       --> AGAAAACAAACTTTATAGCACCTCTATCAACTTGAAACCTCTTCATTATA
EY918429       --> ..................................................
EY910119       --> AGAAAACAAACTTTATGGCACCTCTATCAACTTGAAACCTCTTCATTATA
EW719830       --> AGAAAACAAACTTTATAGCACCTCTATCAACTTGAAACCTCTTCATTATA

               501    -    551
UN21668        --> TTTGGGTACTGATGAAGAAGACGCAGAGTTGGCATGTATGGCCCATCACG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV566684       <-- TTTGGGTACTGATGAAGAAGACGCAGAGTTGGCATGTATGGCCCATCACG
FD989329       <-- TTTGGGTACTGATGAAGAAGACGCAGAGTTGGCATGTATGGCCCATCACG
FD536218       <-- TTTGGGTACTGATGAAGAAGACGCAGAGTTGGCATGTATGGCCCATCACG
EY899917       <-- TTTGGGTACTGATGAAGAAGACGCAGAGTTGGCATGTATGGCCCATCACG
EX747142       <-- TTTGGGTACTGATGAAGAAGACGCAGAGTTGGCATGTATGGCCCATCACG
EY913981       <-- TTTGGGTACTGATGAAGAAGACGCAGAGTTGGCATGTATGGCCCATCACG
EY922470       <-- TTTGGGTACTGATGAAGAAGACGCAGAGTTGGCATGTATGGCCCATCACG
EY926584       --> TTTGGGTACTGATGAAGAAGACGCAAAGTTGGCATGTATGGCCCATCACG
FD531728       --> TTTGGGTACTGATGAAGAAGACGCAGAGTTGGCATGTATGGCCCATCACG
EY918429       --> ..................................................
EY910119       --> TTTGGGTACTGATGAAGAA...............................
EW719830       --> TTTGGGTACTGATGAAGAAGACGCAGAGTTGGCATGTATGGCCCATCACG

               551    -    601
UN21668        --> GATACAGAAGAAGAGAGGGACATTGTTGACAACAACTAGCGTCAGATGGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV566684       <-- GATACAGAAGAAGAGAGGGACATTGTTGACAACAACTAGCGTCAGATGGT
FD989329       <-- GATACAGAAGAAGAGAGGGACATTGTTGACAACAACTAGCGTCAGATGGT
FD536218       <-- GATACAGAAGAAGAGAGGGACATTGTTGACAACAACTAGCGTCAGATGGT
EY899917       <-- GATACAGAAGAAGAGAGGGACATTGTTGACAACAACTAGCGTCAGATGGT
EX747142       <-- GATACAGAAGAAGAGAGGGACATTGTTGACAACAACTAGCGTCAGATGGT
EY913981       <-- GATACAGAAGAAGAGGGGGACATTGTTGACAACAACTAGCGTCAGATGGT
EY922470       <-- GATACAGAAGAAGAGGGGGACATTGTTGACAACAACTAGCGTCAGATGGT
EY926584       --> GATACAGAAGAAGAGAGGGACATTGTTGACAACAACTAGCGTCAGATGGT
FD531728       --> GATACAGAAGAAGAGAGGGACATTGTTGACAACAACTAGCGTCAGATGGT
EY918429       --> ..................................................
EY910119       --> ..................................................
EW719830       --> GATACAGAAGAAGAGAGGGACATTGTTGACAACAACTAGCGTCAGATGGT

               601    -    651
UN21668        --> TTGGGCACTTGACTACAATGAGAGGAGACTTTTTGGGAAGTAGATCCTCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV566684       <-- TTGGGCACTTGACTACAATGAGAGGAGACTTTTTGGGAAGTAGATCCTCC
FD989329       <-- TTGGGCACTTGACTACAATGAGAGGAGACTTTTTGGGAAGTAGATCCTCC
FD536218       <-- TTGGGCACTTGACTACAATGAGAGGAGACTTTTTGGGAAGTAGATCCTCC
EY899917       <-- TTGGGCACTTGACTACAATGAGAGGAGACTTTTTGGGAAGTAGATCCTCC
EX747142       <-- TTGGGCACTTGACTACAATGAGAGGAGACTTTTTGGGAAGTAGGTCCTCC
EY913981       <-- TTGGGCACTTGACTACAATGAGAGGAGACTTTTTGGGAAGTAGATCTTCC
EY922470       <-- TTGGGCACTTGACTACAATGAGAGGAGACTTTTTGGGAAGTAGATCCTCC
EY926584       --> TTGGGCACTTGACTACAATGAGAGGAGACTTTTTGGGAAGTAGATCTTCC
FD531728       --> TTGGGCACTTGACTACAATGAGAGGAGACTTTTTGGGAAGTAGATCCTCC
EY918429       --> ..................................................
EY910119       --> ..................................................
EW719830       --> TTGGGCACTTGACTACAATGAGAGGAGACTTTTTGGGAAGTAGATCTTCC

               651    -    701
UN21668        --> AACACCGTTTCAAGTCCCGGGTACTCTTCTTGAATACTCTGGCGAATCCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV566684       <-- AACACCGTTTCAAGTCCCGGGTACTCTTCTTGAATACTCTGACGAATCCT
FD989329       <-- AACACCGTTTCAAGTCCCGGGTACTCTTCTTGAATACTCTGGCGAATCCT
FD536218       <-- AACACCGTTTCAAGTCCCGGGTACTCTTCTTGAATACTCTGGCGAATCCT
EY899917       <-- AACACCGTTTCAAGTCCCGGGTACTCTTCTTGAATACTCTGGCGAATCCT
EX747142       <-- AACACCGTTTCAAGTCCCGGGTACTCTTCTTGAATACTCTGGCGAATCCT
EY913981       <-- AACACCGTTTCAAGTCCCGGGTACTCTTCTTGAATACTCTGGCGAATCCT
EY922470       <-- AACACCGTTTCAAGTCCCGGGTACTCTTCTTGAATACTCTGGCGAATCCT
EY926584       --> AACACCGTTTCAAGTCCCGGGTACTCTTCTTGAATACTCTGGCGAATCCT
FD531728       --> AACACCGTTTCAAGTCCCGGGTACTCTTCTTGAATACTCTGGCGAATCCT
EY918429       --> ..................................................
EY910119       --> ..................................................
EW719830       --> AACACCGTTTCAAGTCCCGGGTACTCTTCTTGAATACTCTGGCGAATCCT

               701    -    751
UN21668        --> ACGTTGGACAGAAGCCTTTACTTGGTTTTGCGATGAAACCTCCTCCATTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV566684       <-- ACGTTGGACAGAAGCCTTTACTTGGTTTTGCGATGAAACCTCCTCCATTG
FD989329       <-- ACGTTGGACAGAAGCCTTTACTTGGTTTTGCGATGAAACCTCCTCCATTG
FD536218       <-- ACGTTGGACAGAAGCCTTTACTTGGTTTTGCGATGAAACCTCCTCCATTG
EY899917       <-- ACGTTGGACAGAAGCCTTTACTTGGTTTTGCGATGAAACCTCCTCCATTG
EX747142       <-- ACGTTGGACAGAAGCCTTTACTTGGTTTTGCGATGAAACCTCCTCCATTG
EY913981       <-- ACGTTGGACAGAAGCCTTTACTTGGTTTTGCGATGAAACCTCCTCCATTG
EY922470       <-- ACGTTGGACAGAAGCCTTTACTTGGTTTTGCGATGAAACCTCCTCCATTG
EY926584       --> ACGTTGGACAGAAGCCTTTACTTGGTTTTGCG..................
FD531728       --> ACGTTGGACAGAAGCCTTTACTTGG.........................
EY918429       --> ..................................................
EY910119       --> ..................................................
EW719830       --> ACGTTGGACAGAAGCCTTTACTTGGTTTTGCGATGAAACCTCCTCCATTG

               751    -    801
UN21668        --> AAAACTTCTTGAACATGTT-GGATGATGAGAGGTTATTTCTTTTGGTAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV566684       <-- AAAACTTCTTGAACATGTT-GGATGATGAGAGGTTATTTCTTTTGGTAAG
FD989329       <-- AAAACTTCTTGAACATGTT-GGATGATGAGAGGTTATTTCTTTTGGTAAG
FD536218       <-- AAAACTTCTTGAACATGTT-GGATGATGAGAGGTTATTTCTTTTGGTAAG
EY899917       <-- AAAACTTCTTGAACATGTT-GGATGATGAGAGGTTATTTCTTTTGGTAAG
EX747142       <-- AAAACTTCTTGAACATGTT-GGATGATGAGAGGTTATTTCTTTTGGTAAG
EY913981       <-- AAAACTTCTTGAACATGTT-GAATGATGAGAGGTTATTTCTTT-GGTAAG
EY922470       <-- AAAACTTCTTGAACATGTTTGGATGATGAGAGGTTATTTCTTT-GGTAAG
EY926584       --> ..................................................
FD531728       --> ..................................................
EY918429       --> ..................................................
EY910119       --> ..................................................
EW719830       --> AAAACTTCTTGAACATGTT-GGATGATGAGAGGTTATTTCTTTTGGTAAG

               801    -    851
UN21668        --> TTTA-TGAGATTTGGTCGATGCAGCTGGAATACAACCGGAGAGAGAGAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV566684       <-- TTTA-TGAGATTTGGTCGATGCAGCTGGAATACAACCGGAGAGAGAGAGA
FD989329       <-- TTTT-TGAGATTTGGTCGATGCAGCTGGAATACAACCGGAGAGAGAGAGA
FD536218       <-- TTTA-TGAGATTTGGTCGATGCAGCTGGAATACAACCGGAGAGAGAGAGA
EY899917       <-- TTTA-TGAGATTTGGTCGATGCAGCTGGAATACAACCGGAGAGAGAGAGA
EX747142       <-- TTTA-TGAGATTTGGTCGATGCAGCTGGAATACAACCGGAGAGAGAGAGA
EY913981       <-- TTTA-TGAGATTTGGTCGATGCAGCTGGAAAACAACCGGAGAGAGAGAGA
EY922470       <-- TTTACTGAGATTTGGTCGATGCAGCTGGAATACAACCGGAGAGAGAGAGA
EY926584       --> ..................................................
FD531728       --> ..................................................
EY918429       --> ..................................................
EY910119       --> ..................................................
EW719830       --> TTTA-TGAGATTTGGTCGATGCAGCTGGAA....................

               851    -    901
UN21668        --> GAGAG----GATGCGTTTCCGAACCGAGCGAGAATGTTTCTCTGCGTCCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV566684       <-- GAGAG----GATGCGTTTCCGAACCGAGCGAGAATGTTTCTCTGCGTCC.
FD989329       <-- GAGAG----GATGCGTTTCCGAACCGAGCGAGAATGTTTCTCTGCGTCC.
FD536218       <-- GAGAG----GATGCGTTTCCGAACCGAGCGAGAATGTTTCTCTGCGTCC.
EY899917       <-- GAGAG----GATGCGTTTCCGAACCGAGCGAGAATGTTTCTCTGCGTGAA
EX747142       <-- GA--G----GATGCGTTTCCGAACCGAGCGAGAATGTTTCTCTGCGTGAA
EY913981       <-- GAGAGATGGGATGCGTTTCCGAACCGAGAGAGAATGTTTCTCTGCGTgaa
EY922470       <-- GAGAGagagatgggatgcgtttccgaacccc...................
EY926584       --> ..................................................
FD531728       --> ..................................................
EY918429       --> ..................................................
EY910119       --> ..................................................
EW719830       --> ..................................................

               901    -    951
UN21668        --> GTTCCCC
                   ~~~~~~~
EV566684       <-- .......
FD989329       <-- .......
FD536218       <-- .......
EY899917       <-- GTTCCCC
EX747142       <-- GTTCC..
EY913981       <-- attccc.
EY922470       <-- .......
EY926584       --> .......
FD531728       --> .......
EY918429       --> .......
EY910119       --> .......
EW719830       --> .......