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Alignment for radish unigene UN21681

               1      -     51
UN21681        --> AGGGCCGGATTCAATCCAAAGCCGTAGACCGATTCTGAGCGATCTCCAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX750888       <-- ..................................tTGAGCGATCTCCAAT  Raphanus raphanistrum subsp. maritimus
EX768373       <-- .....................................AGCGATCTCCAAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX900915       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EX900710       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY933739       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY901910       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY936942       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY927917       <-- ..................................................  Raphanus sativus var. oleiformis
EX891105       <-- ..................................................  Raphanus sativus var. oleiformis
EX767096       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD958776       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EY903835       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD969319       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX894036       <-- ..................................................  Raphanus sativus var. oleiformis
FD578245       --> AGGGCCGGATTCAATCCAAAGCCGTAGACCGATTCTGAGCGATCTCCAAT  Raphanus sativus cv Rat-Tail Radish #3870
EX896845       --> .GGGCCGGATTCAATCCAAAGCCGTAGACCGATTCTGAGCGATCTCCAAT  Raphanus sativus cv Early Scarlet Globe
EX904815       --> .GGGCCGGATTCAATCCAAAGCCGTAGACCGATTCTGAGCGATCTCCAAT  Raphanus sativus cv Rat-Tail Radish #3870
EX886803       --> .....gGGATTCAATCCAAAGCCGTAGACCGATTCTGAGCGATCTCCAAT  Raphanus sativus var. oleiformis
EX897093       --> ......................gggAGACCGATTCTGAGCGATCTCCAAT  Raphanus sativus cv Early Scarlet Globe
EY941346       --> .......................ggAGACCGATTCTGAGCGATCTCCAAT  Raphanus sativus cv Early Scarlet Globe
EX746494       --> ........gggccggattcaatccaaagCCGATTTTGAGCGATCTCCAAT  Raphanus raphanistrum subsp. maritimus
EX762929       --> ........gggccggattcaatccaaagCCGATTTTGAGCGATCTCCAAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY908062       --> ......ggacgccggattcaatccaaagCCGATTTTGAGCGATCTCCAAT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD962181       --> ........gggccggattcaatccaaagCCGATTTTGAGCGATCTCCAAT  Raphanus raphanistrum subsp. maritimus
FD550209       --> ............................ggGATTTTGAGCGATCTCCAAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX890545       --> ....................ggaatccaaagtcgtTGAGCGATCTCCAAT  Raphanus sativus var. oleiformis
EY905185       --> ...............................gggtTGAGCGATCTCCAAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY905484       --> ..............ggggattcgatccaaagtcgtTGAGCGATCTCCAAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY932121       --> ..............ggggattcaatccaaagtcgtTGAGCGATCTCCAAT  Raphanus sativus var. oleiformis
FD973669       --> ..............ggggattcgatccaaagtcgtTGAGCGATCTCCAAT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD578934       --> ..............................................CAAT  Raphanus sativus cv Rat-Tail Radish #3870
EX764465       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY937455       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EY924472       --> ..................................................  Raphanus raphanistrum subsp. landra

               51     -    101
UN21681        --> GGCGGAAGAAGA---TTCCGTTAAAGAGGGTTACGCTGAGATCGTTGTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX750888       <-- GGCGGAAGAAGA---T-CCGTTAAAGAGGGGTATGCTGAGATCGTTGTTG  Raphanus raphanistrum subsp. maritimus
EX768373       <-- GGCGGAAGAAGA-CAGTCCGTTAAAGAGGGGTATGCTGAGATCGTTGTTG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX900915       <-- .....aagaagacagTTCCGTTAAAGAGGGT-ACGCTGAGATCGT-GTTG  Raphanus sativus cv Early Scarlet Globe
EX900710       <-- .............agaTCCGT-AAAGAGGGT-ACGCTGAGATCGTTGTTG  Raphanus sativus cv Early Scarlet Globe
EY933739       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY901910       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY936942       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY927917       <-- ..................................................  Raphanus sativus var. oleiformis
EX891105       <-- ..................................................  Raphanus sativus var. oleiformis
EX767096       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD958776       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EY903835       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD969319       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX894036       <-- ..................................................  Raphanus sativus var. oleiformis
FD578245       --> GGCGGAAGAAGA---TTCCGTTAAAGAGGTTTACGCTGAGATCGTTGTTG  Raphanus sativus cv Rat-Tail Radish #3870
EX896845       --> GGCGGAAGAAGA---TTCCGTTAAAGAGGGTTACGCTGAGATCGTTGTTG  Raphanus sativus cv Early Scarlet Globe
EX904815       --> GGCGGAAGAAGACAGTTCCGTTAAAGAGGGTTACGCTGAGATCGTTGTTG  Raphanus sativus cv Rat-Tail Radish #3870
EX886803       --> GACGGAAGAAGA---TTCCGTTAAAGAGGGTTACGCTGAGATCGTTGTTG  Raphanus sativus var. oleiformis
EX897093       --> GGCGGAAGAAGACAGTTCCGTTAAAGAGGGTTACGCTGAGATCGTTGTTG  Raphanus sativus cv Early Scarlet Globe
EY941346       --> GGCGGAAGAAGA---TTCCGTTAAAGAGGGTTACGCTGAGATCGTTGTTG  Raphanus sativus cv Early Scarlet Globe
EX746494       --> GGCGGAAGAAGA---TTCCGTTAAAGAGGGGTATGCTGAGATCGTTGTTG  Raphanus raphanistrum subsp. maritimus
EX762929       --> GGCGGAAGAAGA---TTCCGTTAAAGAGGGTTATGCTGAGATCGTTGTTG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY908062       --> GGCGGAAGAAGA---TTCCGTTAAAGAGGGTTATGCTGAGATCGTTGTTG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD962181       --> GGCGGAAGAAGA---TTCCGTTAAAGAGGGGTATGCTGAGATCGTTGTCG  Raphanus raphanistrum subsp. maritimus
FD550209       --> GGCGGAAGAAGA---TTCCGTTAAAGAGGGTTATGCTGAGATCGTTGTTG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX890545       --> GGCGGAAGAAGA---TTCCGTTAAAGAGGGTTACGCTGAGATCGTTGTTG  Raphanus sativus var. oleiformis
EY905185       --> GGCGGAAGAAGA---TTTCGTTAAAGAGGGTTATGCTGAGATCGTTGTTG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY905484       --> GGCGGAAGAAGA---TTTCGTTAAAGAGGGTTATGCTGAGATCGTTGTTG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY932121       --> GGCGGAAGAAGA---TTCCGTTAAAGAGGGTTACGCTGAGATCGTTGTTG  Raphanus sativus var. oleiformis
FD973669       --> GGCGGAAGAAGA---TTTCGTTAAAGAGGGTTATGCTGAGATCGTTGTTG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD578934       --> GGCGGAAGAAGACAGTTCCGTTAAAGAGGGTTACGCTGAGATCGTTGTTG  Raphanus sativus cv Rat-Tail Radish #3870
EX764465       --> ...................................CTGAGATCGTTGTTG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY937455       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EY924472       --> ..................................................  Raphanus raphanistrum subsp. landra

               101    -    151
UN21681        --> TACGTCATGGAGAAACATCTTGGAATGCCGAGAGAAAGATCCAGGGTCAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX750888       <-- TACGTCATGGAGAAACATCTTGGAATGCCGAGAGAGAGATCCAGGGTCAT
EX768373       <-- TACGTCATGGAGAA-CATCTTGGAATGCCGAGAGAAAGATCCAGGGTCAT
EX900915       <-- TACGTCATGGAGAAACATCTTGGAATGCCGAGAGAAAGATCCAGGGTCAT
EX900710       <-- TACGTCATGGAGAA-CATCTTGGAATGCCGAGAGAAAGATCCAGGGTCAT
EY933739       <-- ......gTGGAGAAACATCTTGGAATGCCGAGAGAAAGATCCAGGGTCAT
EY901910       <-- ..........aaAAACATCTTGGAATGCCGAGAGAAAGATCCAGGGTCAT
EY936942       <-- ..................................................
EY927917       <-- ..................................................
EX891105       <-- ..................................................
EX767096       <-- ..................................................
FD958776       <-- ..................................................
EY903835       <-- ..................................................
FD969319       <-- ..................................................
EX894036       <-- ..................................................
FD578245       --> TACGTCATGGAGAAACATCTTGGAATGCCGAGAGAAAGATCCAGGGTCAT
EX896845       --> TACGTCATGGAGAAACATCTTGGAATGCCGAGAGAAAGATCCAGGGTCAT
EX904815       --> TACGTCATGGAGAAACATCTTGGAATGCCGAGAGAAAGATCCAGGGTCAT
EX886803       --> TACGTCATGGAGAAACATCTTGGAATGCCGAGAGAAAGATCCAGGGTCAT
EX897093       --> TACGTCATGGAGAAACATCTTGGAATGCCGAGAGAAAGATCCAGGGTCAT
EY941346       --> TACGTCATGGAGAAACATCTTGGAATGCCGAGAGAAAGATCCAGGGTCAT
EX746494       --> TACGTCATGGAGAAACATCTTGGAATGCCGAGAGAGAGATCCAGGGTCAT
EX762929       --> TACGTCATGGAGAAACATCTTGGAATGCCGAGAGAAAGATCCAGGGTCAT
EY908062       --> TACGTCACGGAGAAACATCTTGGAATGCCGAGAGAAAGATCCAGGGTCAT
FD962181       --> TACGTCATGGAGAAACATCTTGGAATGCCGAGAGAAAGATCCAGGGTCAT
FD550209       --> TACGTCATGGAGAAACATCTTGGAATGCCGAGAGAAAGATCCAGGGTCAT
EX890545       --> TACGTCATGGAGAAACATCTTGGAATGCCGAGAGAAAGATCCAGGGTCAT
EY905185       --> TACGTCATGGAGAAACATCTTGGAATGCCGAGAGAAAGATCCAGGGTCAT
EY905484       --> TACGTCATGGAGAAACATCTTGGAATGCCGAGAGAAAGATCCAGGGTCAT
EY932121       --> TACGTCATGGAGAAACATCTTGGAATGCCGAGAGAAAGATCCAGGGTCAT
FD973669       --> TACGTCATGGAGAAACATCTTGGAATGCCGAGAGAAAGATCCAGGGTCAT
FD578934       --> TACGTCATGGAGAAACATCTTGGAATGCCGAGAGAAAGATCCAGGGTCAT
EX764465       --> TACGTCATGGAGAAACATCTTGGAATGCCGAGAGAAAGATCCAGGGTCAT
EY937455       --> ......gTGGAGAAACATCTTGGAATGCCGAGAGAAAGATCCAGGGTCAT
EY924472       --> ..................................................

               151    -    201
UN21681        --> TTGGATGTTGAACTAAACGATGCAGGAAGACAACAAGCAGAAAAAGTTGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX750888       <-- TTGGATGTTGAACTAAACGATGCAGGAAGACAACAAGCAAAAAAAGTTGC
EX768373       <-- TTGGATGTTGAACTAAACGATGCAGGAAGACAACAAGCAGAAAAAGTTGC
EX900915       <-- TTGGATGTTGAACTAAACGATGCAGGAAGACAACAAGCAGAAAAAGTTGC
EX900710       <-- TTGGATGTTGAACTAAACGATGCAGGAAGACAACAAGCAGAAAAAGTTGC
EY933739       <-- TTGGATGTTGAACTAAACGATGCAGGAAGACAACAAGCAGAAAAAGTTGC
EY901910       <-- TTGGATGTTGAACTAAACGATGCAGGAAGACAACAAGCAGAAAAAGTTGC
EY936942       <-- ...............................AACAAGCAGAAAAAGTTGC
EY927917       <-- ..................................................
EX891105       <-- ..................................................
EX767096       <-- ..................................................
FD958776       <-- ..................................................
EY903835       <-- ..................................................
FD969319       <-- ..................................................
EX894036       <-- ..................................................
FD578245       --> TTGGATGTTGAACTAAACGATGCAGGAAGACAACAAGCAGAAAAAGTTGC
EX896845       --> TTGGATGTTGAACTAAACGATGCAGGAAGACAACAAGCAGAAAAAGTTGC
EX904815       --> TTGGATGTTGAACTAAACGATGCAGGAAGACAACAAGCA--AAAAGTTGC
EX886803       --> TTGGATGTTGAACTAAACGATGCAGGAAGACAACAAGCAGAAAAAGTTGC
EX897093       --> TTGGATGTTGAACTAAACGATGCAGGAAGACAACAAGCAGAAAAAGTTGC
EY941346       --> TTGGATGT-GAACTAAACG-TGCAGGAAGACAACAAGCAGAAAA......
EX746494       --> TTGGATGTTGAACTAAACGATGCAGGAAGACAACAAGCAAAAAAAGTTGC
EX762929       --> TTGGATGTTGAACTAAACGATGCAGGAAGACAACAAGCACAAAAAGTTGC
EY908062       --> TTGGATGTTGAACTAAACGATGCAGGAAGACAACAAGCAGAAAAAGTTGC
FD962181       --> TTGGATGTTGAACTAAACGATGCAGGAAGACAACAAGCAGAAAAAGTTGC
FD550209       --> TTGGATGTTGAACTAAACGATGCAGGAAGACAACAAGCACAAAAAGTTGC
EX890545       --> TTGGATGTTGAACTAAACGATGCAGGAAGACAACAAGCAGAAAAAGTTGC
EY905185       --> TTGGATGTTGAACTAAACGATGCAGGAAGACAACAAGCAGAAAAAGTTGC
EY905484       --> TTGGATGTTGAACTAAACGATGCAGGAAGACAACAAGCAGAAAAAGTTGC
EY932121       --> TTGGATGTTGAACTAAACGATGCAGGAAGACAACAAGCAGAAAAAGTTGC
FD973669       --> TTGGATGTTGAACTAAACGATGCAGGAAGACAACAAGCAGAAAAAGTTGC
FD578934       --> TTGGATGTTGAACTAAACGATGCAGGAAGACAACAAGCAGAAAAAGTTGC
EX764465       --> TTGGATGTTGAACTAAACGATGCAGGAAGACAACAAGCAGAAAAAGTTGC
EY937455       --> TTGGATGTTGAACTAAACGATGCAGGAAGACAACAAGCAGAAAAAGTTGC
EY924472       --> ..................................................

               201    -    251
UN21681        --> TGAGCGGTTATCAAAGGAGCCTAAGGTATCTTATGTTTACTCTTCTGACT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX750888       <-- TGAGCGGTTATCAAAGGAGCCTAAGGTATCTTATGTTTACTCCTCTGACT  Raphanus raphanistrum subsp. maritimus
EX768373       <-- TGAGCGGTTATCAAAGGAGCCTAAGGTATCTTATGTTTACTCCTCTGACT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX900915       <-- TGAGCGGTTATCAAAGGAGCCTAAGGTATCTTATGTTTACTCTTCTGACT  Raphanus sativus cv Early Scarlet Globe
EX900710       <-- TGAGCGGTTATCAAAGGGGCCTAAGGTATCTTATGTTTACTCTTCTGACT  Raphanus sativus cv Early Scarlet Globe
EY933739       <-- TGAGCGGTTATCAAAGGAGCCTAAGGTATCTTATGTTTACTCTTCTGACT  Raphanus sativus cv Early Scarlet Globe
EY901910       <-- TGAGCGGTTATCAAAGGAGCCTAAGGTATCTTATGTTTACTCTTCTGACT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY936942       <-- TGAGCGGTTATCAAAGGAGCCTAAGGTATCTTATGTTTACTCTTCTGACT  Raphanus sativus cv Early Scarlet Globe
EY927917       <-- ..................................GTTTACTCTTCTGACT  Raphanus sativus var. oleiformis
EX891105       <-- ........................................TCTTCTGACT  Raphanus sativus var. oleiformis
EX767096       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD958776       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EY903835       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD969319       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX894036       <-- ..................................................  Raphanus sativus var. oleiformis
FD578245       --> TGGGCGGTTATCAAAGGAGCCTAAGGTATCTTATGTTTACTCTTCTGACT  Raphanus sativus cv Rat-Tail Radish #3870
EX896845       --> TGAGCGGTTATCAAAGGGGCCTAAGGTATCTTATGTTTACTCTTCTGACT  Raphanus sativus cv Early Scarlet Globe
EX904815       --> TGAGCGGTTATCAAAGGAGCCTAAGGTATCTTATGTTTACTCTTCTGACT  Raphanus sativus cv Rat-Tail Radish #3870
EX886803       --> TGAGCGGTTATCAAAGGAGCCTAAGGTATCTTATGTTTACTCTTCTGACT  Raphanus sativus var. oleiformis
EX897093       --> TGAGCGGTTATCAAAGGAGCCTAAGGTATCTTATGTTTACTCTTCTGACT  Raphanus sativus cv Early Scarlet Globe
EY941346       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EX746494       --> TGAGCGGTTATCAAAGGAGCCTAAGGTATCTTATGTTTACTCCTCTGACT  Raphanus raphanistrum subsp. maritimus
EX762929       --> TGAGCGGTTATCAAAGGAGCCTAAGGTATCTTATGTTTACTCTTCTGACT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY908062       --> TGAGCGGTTATCAAAGGAGCCTAAGGTATCTTATGTTTACTCTTCTGACT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD962181       --> TGAGCGGTTATCAAAGGAGCCTAAGGTATCTTATGTTTACTCCTCTGACT  Raphanus raphanistrum subsp. maritimus
FD550209       --> TGAGCGGTTATCAAAGGAGCCTAAGGTATCTTATGTTTACTCTTCTGACT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX890545       --> TGAGCGGTTATCAAAGGAGCCTAAGGTATCTTATGTTTACTCTTCTGACT  Raphanus sativus var. oleiformis
EY905185       --> TGAGCGGTTATCAAAGGAGCCTAAGGTATCTTATGTTTACTCTTCTGACT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY905484       --> TGAGCGGTTATCAAAGGAGCCTAAGGTATCTTATGTTTACTCTTCTGACT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY932121       --> TGAGCGGTTATCAAAGGAGCCTAAGGTATCTTATGTTTACTCTTCTGACT  Raphanus sativus var. oleiformis
FD973669       --> TGAGCGGTTATCAAAGGAGCCTAAGGTATCTTATGTTTACTCTTCTGACT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD578934       --> TGAGCGGTTATCAAAGGAGCCTAAGGTATCTTATGTTTACTCTTCTGACT  Raphanus sativus cv Rat-Tail Radish #3870
EX764465       --> TGAGCGGTTATCAAAGGAGCCTAAGGTATCTTATGTTTACTCCTCTGACT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY937455       --> TGAGCGGTTATCAAAGGAGCCTAAGGTATCTTATGTTTACTCTTCTGACT  Raphanus sativus cv Early Scarlet Globe
EY924472       --> ..................................................  Raphanus raphanistrum subsp. landra

               251    -    301
UN21681        --> TGAAGAGAGCCTTTGAGACTGCTCAGATCATTGCAGCTAAATGCGGCAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX750888       <-- TAAAGAGAGCCTTTGAGACTGCTCAGATCATTGCAGCTAAATGCGGCAAG  Raphanus raphanistrum subsp. maritimus
EX768373       <-- TAAAGAGAGCCTTTGAGACTGCTCAGATCATTGCAGCTAAATGCGGCAAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX900915       <-- TGAAGAGAGCCTTTGAGACTGCTCAGATCATTGCAGCTAAATGCGGCAAG  Raphanus sativus cv Early Scarlet Globe
EX900710       <-- TGAAGAGAGCCTTTGAGACTGCTCAGATCATTGCAGCTAAATGCGGCAAG  Raphanus sativus cv Early Scarlet Globe
EY933739       <-- TGAAGAGAGCCTTTGAGACTGCTCAGATCATTGCAGCTAAATGCGGCAAG  Raphanus sativus cv Early Scarlet Globe
EY901910       <-- TGAAGAGAGCCTTTGAGACTGCTCAGATCATTGCAGCTAAATGCGGCAAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY936942       <-- TGAAGAGAGCCTTTGAGACTGCTCAGATCATTGCAGCTAAATGCGGCAAG  Raphanus sativus cv Early Scarlet Globe
EY927917       <-- TGAAGAGAGCCTTTGAGACTGCTCAGATCATTGCAGCTAAATGCGGCAAG  Raphanus sativus var. oleiformis
EX891105       <-- TGAAGAGAGCCTTTGAGACTGCTCAGATCATTGCAGCTAAATGCGGCAAG  Raphanus sativus var. oleiformis
EX767096       <-- ...AGAGAGCCTTTGAGACTGCTCAGATCATTGCAGCTAAATGCGGCAAG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD958776       <-- ....GAGAGCCTTTGAGACTGCTCAGATCATTGCAGCTAAATGCGGCAAG  Raphanus raphanistrum subsp. maritimus
EY903835       <-- ...............AGACTGCTCAGATCATTGCAGCTAAATGCGGCAAG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD969319       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX894036       <-- ..................................................  Raphanus sativus var. oleiformis
FD578245       --> TGAAGAGAGCCTTTGAGACTGCTCAGATCATTGCAGCTAAATGCGGCAAG  Raphanus sativus cv Rat-Tail Radish #3870
EX896845       --> TGAAGAGAGCCTTTGAGACTGCTCAGATCATTGCAGCTAAATGCGGCAAG  Raphanus sativus cv Early Scarlet Globe
EX904815       --> TGAAGAGAGCCTTTGAGACTGCTCAGATCATTGCAGCTAAATGCGGCAAG  Raphanus sativus cv Rat-Tail Radish #3870
EX886803       --> TGAAGAGAGCCTTTGAGACTGCTCAGATCATTGCAGCTAAATGCGGCAAG  Raphanus sativus var. oleiformis
EX897093       --> TGAAGAGAGCCTTTGAGACTGCTCAGATCATTGCAGCTAAATGCGGCAAG  Raphanus sativus cv Early Scarlet Globe
EY941346       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EX746494       --> TAAAGAGAGCCTTTGAGACTGCTCAGATCATTGCAGCTAAATGCGGCAAG  Raphanus raphanistrum subsp. maritimus
EX762929       --> TGAAGAGAGCCTTTGAGACTGCTCAGATCATTGCAGCTAAATGCGGCAAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY908062       --> TGAAGAGAGCCTTTGAGACTGCTCAGATCATTGCAGCTAAATGCGGCAAG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD962181       --> TAAAGAGAGCCTTTGAGACTGCTCAGATCATTGCAGCTAAATGCGGCAAG  Raphanus raphanistrum subsp. maritimus
FD550209       --> TGAAGAGAGCCTTTGAGACTGCTCAGATCATTGCAGCTAAATGCAGCAAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX890545       --> TGAAGAGAGCCTTTGAGACTGCTCAGATCATTGCAGCTAAATGCGGCAAG  Raphanus sativus var. oleiformis
EY905185       --> TGAAGAGAGCCTTTGAGACTGCTCAGATCATTGCAGCTAAATGCGGCAAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY905484       --> TGAAGAGAGCCTTTGAGACTGCTCAGATCATTGCAGCTAAATGCGGCAAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY932121       --> TGAAGAGAGCCTTTGAGACTGCTCAGATCATTGCAGCTAAATGCGGCAAG  Raphanus sativus var. oleiformis
FD973669       --> TGAAGAGAGCCTTTGAGACTGCTCAGATCATTGCAGCTAAATGCGGCAAG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD578934       --> TGAAGAGAGCCTTTGAGACTGCTCAGATCATTGCAGCTAAATGCGGCAAG  Raphanus sativus cv Rat-Tail Radish #3870
EX764465       --> TAAAGAGAGCCTTTGAGACTGCTCAGATCATTGCAGCTAAATGCGGCAAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY937455       --> TGAAGAGAGCCTTTGAGACTGCTCAGATCATTGCAGCTAAATGCGGCAAG  Raphanus sativus cv Early Scarlet Globe
EY924472       --> ..................................................  Raphanus raphanistrum subsp. landra

               301    -    351
UN21681        --> GTTGAGGTACTTACTGATCCTGATTTGCGGGAGAGACATTTAGGAGATAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX750888       <-- GTTGAGGTACTTACTGATCCTGATTTGCGGGAGAGGCATTTAGGGGATAT  Raphanus raphanistrum subsp. maritimus
EX768373       <-- GTTGAGGTACTTACTGATCCTGATTTGCGGGAGAGGCATTTAGGGGATAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX900915       <-- GTTGAGGTACTTACTGATCCTGATTTGCGGGAGAGACATTTAGGAGATAT  Raphanus sativus cv Early Scarlet Globe
EX900710       <-- GTTGAGGTACCTACTGATCCTGATTTGCGGGAGAGACATTTAGGAGATAT  Raphanus sativus cv Early Scarlet Globe
EY933739       <-- GTTGAGGTACTTACTGATCCTGATTTGCGGGAGAGACATTTAGGAGATAT  Raphanus sativus cv Early Scarlet Globe
EY901910       <-- GTTGAGGTACTTACTGATCCTGATTTGCGGGAGAGGCATTTAGGAGATAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY936942       <-- GTTGAGGTACTTACTGATCCTGATTTGCGGGAGAGACATTTAGGAGATAT  Raphanus sativus cv Early Scarlet Globe
EY927917       <-- GTTGAGGTACTTACTGATCCTGATTTGCGGGAGAGGCATTTAGG-GATAT  Raphanus sativus var. oleiformis
EX891105       <-- ATTGAGTTACTTACTGATCCTGATTTGCGGGAGAGACATTTAGGAGATAT  Raphanus sativus var. oleiformis
EX767096       <-- GTTGAGGTACTTACTGATCCTGATTTGCGGGAGAGACATTTAGGAGATAT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD958776       <-- GTTGAGGTACTTACTGATCCTGATTTGCGGGAGAGGCGTTTAGG--ATAT  Raphanus raphanistrum subsp. maritimus
EY903835       <-- GTTGAGGTACTTACTGATCCTGATTTGCGGGAGAGACATTTAGGAGATAT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD969319       <-- .................TCCTGATTTGCGGGAGAGGCATTTAGGAGATAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX894036       <-- ..................................................  Raphanus sativus var. oleiformis
FD578245       --> GTTGAGGTACTTACTGATCCTGATTTGCGGGAGAGACATTTAGGAGATAT  Raphanus sativus cv Rat-Tail Radish #3870
EX896845       --> GTTGAGGTACCTACTGATCCTGATTTGCGGGAGAGACATTTAGGAGATAT  Raphanus sativus cv Early Scarlet Globe
EX904815       --> GTTGAGGTACTTACTGATCCTGATTTGCGGGAGAGACATTTAGGAGATAT  Raphanus sativus cv Rat-Tail Radish #3870
EX886803       --> ATTGAGTTACTTACTGATCCTGATTTGCGGGAGAGACATTTAGGAGATAT  Raphanus sativus var. oleiformis
EX897093       --> GTTGAGGTACTTACTGATCCTGATTTGCGGGAGAGACATTTAGGAGATAT  Raphanus sativus cv Early Scarlet Globe
EY941346       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EX746494       --> GTTGAGGTACTTACTGATCCTGATTTGCGGGAGAGGCATTTAGGGGATAT  Raphanus raphanistrum subsp. maritimus
EX762929       --> GTTGAGGTACTTACTGATCCTGATTTGCGGGAGAGACATTTAGGAGATAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY908062       --> GTTGAGGTACTTACTGATCCTGATTTGCGGGAGAGACATTTAGGAGATAT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD962181       --> GTTGAGGTACTTACTGATCCTGATTTGCGGGAGAGGCGTTTAGGA--TAT  Raphanus raphanistrum subsp. maritimus
FD550209       --> GTTGAGGTACTTACTGATCCTGATTTGCGGGAGAGACATTTAGGAGATAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX890545       --> GTTGAGGTACTTACTGATCCTGATTTGCGGGAGAGGCATTTAGGGGATAT  Raphanus sativus var. oleiformis
EY905185       --> GTTGAGGTACTTACTGATCCTGATTTGCGGGAGAGGCATTTAGGAGATAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY905484       --> GTTGAGGTACTTACTGATCCTGATTTGCGGGAGAGGCATTTAGGAGATAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY932121       --> GTTGAGGTACTTACTGATCCTGATTTGCGGGAGAGGCATTTAGG-GATAT  Raphanus sativus var. oleiformis
FD973669       --> GTTGAGGTACTTACTGATCCTGATTTGCGGGAGAGGCATTTAGGAGATAT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD578934       --> GTTGAGGTACTTACTGATCCTGATTTGCGGGAGAGACATTTAGGAGATAT  Raphanus sativus cv Rat-Tail Radish #3870
EX764465       --> GTTGAGGTACTTACTGATCCTGATTTGCGGGAGAGGCATTTAGGGGATAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY937455       --> GTTGAGGTACTTACTGATCCTGATTTGCGGGAGAGACATTTAGGAGATAT  Raphanus sativus cv Early Scarlet Globe
EY924472       --> ..................................................  Raphanus raphanistrum subsp. landra

               351    -    401
UN21681        --> GCAAGGTCTTGTGTACCAAGAAGCTTCCAAACTTCGCCCTGAAGCTTACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX750888       <-- GCAAGGTCTTGTGTACCAAGAAGCTTCCAAACTTCGCCCTGAAGCTTACA
EX768373       <-- GCAAGGTCTTGTGTACCAAGAAGCTTCCAAACTTCGCCCTTAAGCTTACA
EX900915       <-- GCAAGGTCTTGTGTACCAAGAAGCTTCCAAACTTCGCCCTGAAGCTTACA
EX900710       <-- GCAAGGTCTTGTGTACCAAGAAGCTTCCAAACTTCGCCCTGAAGCTTACA
EY933739       <-- GCAAGGTCTTGTGTACCAAGAAGCTTCCAAACTTCGCCCTGAAGCTTACA
EY901910       <-- GCAAGGTCTTGTGTACCAAGAAGCTTCCAAACTTCGCCCTGAAGCTTACA
EY936942       <-- GCAAGGTCTTGTGTACCAAGAAGCTTCCAAACTTCGCCCTGAGGCTTACA
EY927917       <-- GCAAGGTCTTGTGTACCAAGAAGCTTCCAAACTTCGCCCTGAAGCTTACA
EX891105       <-- GCAAGGTCTTGTGTACCAAGAAGCTTCCAAACTTCGCCCTGAAGCTTACA
EX767096       <-- GCAAGGTCTTGTGTACCAAGAAGCTTCCAAACTTCGCCCTGAAGCTTACA
FD958776       <-- GCAAGGTCTTGTGTACCAAGAAGCTTCTAAACTTCGCCCTGAAGCTTACA
EY903835       <-- GCAAGGTCTTGTGTACCAAGAAGCTTCCAAACTTCGCCCTGAAGCTTACA
FD969319       <-- GCAAGGTCTTGTGTACCAAGAAGCTTCCAAACTTCGCCCTGAAGCTTACA
EX894036       <-- ....................AAGCTTCCAAACTTCGCCCTGAAGCTTACA
FD578245       --> GCAAGGTCTTGTGCACCAAGAAGCTTCCAAACTTCGCCCTGAAGCTTACA
EX896845       --> GCAAGGTCTTGTGTACCAAGAAGCTTCCAAACTTCGCCCTGAAGCTTACA
EX904815       --> GCAAGGTCTTGTGTACCAAGAAGCTTCCAAACTTCGCCCTGAAGCTTACA
EX886803       --> GCAAGGTCTTGTGTACCAAGAAGCTTCCAAACTTCGCCCTGAAGCTTACA
EX897093       --> GCAAGGTCTTGTGTACCAAGAAGCTTCCAAACTTCGCCCTGAAGCTTACA
EY941346       --> ..................................................
EX746494       --> GCAAGGTCTTGTGTACCAAGAAGCTTCCAAACTTCGCCCTGAAGCTTACA
EX762929       --> GCAAGGTCTTGTGTACCAAGAAGCTTCCAAACTTCGCCCTGAAGCTTACA
EY908062       --> GCAAGGTCTTGTGTACCAAGAAGCTTCCAAACTTCGCCCTGAAGCTTACA
FD962181       --> GCAAGGTCTTGTGTACCAAGAAGCTTCTAAACTTCGCCCTGAAGCTTACA
FD550209       --> GCAAGGTCTTGTGTACCAAGAAGCTTCCAAACTTCGCCCTGAAGCTTACA
EX890545       --> GCAAGGTCTTGTGTGCCAAGAAGCTTCCAAACTTCGCCCTGAAGCTTACA
EY905185       --> GCAAGGTCTTGTGTACCAAGAAGCTTCCAAACTTCGCCCTGAAGCTTACA
EY905484       --> GCAAGGTCTTGTGTACCAAGAAGCTTCCAAACTTCGCCCTGAAGCTTACA
EY932121       --> GCAAGGTCTTGTGTACCAAGAAGCTTCCAAACTTCGCCCTGAAGCTTACA
FD973669       --> GCAAGGTCTTGTGTACCAAGAAGCTTCCAAACTTCGCCCTGAAGCTTACA
FD578934       --> GCAAGGTCTTGTGTACCAAGAAGCTTCCAAACTTCGCCCTGAAGCTTACA
EX764465       --> GCAAGGTCTTGTGTACCAAGAAGCTTCCAAACTTCGCCCTTAAGCTTACA
EY937455       --> GCAAGGTCTTGTGTACCAAGAAGCTTCCAAACTTCGCCCTGAAGCTTACA
EY924472       --> ..................................................

               401    -    451
UN21681        --> AGGCCTTCTCATCTAACCGCACAGACGTTGACATTCCAGGTGGAGGAGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX750888       <-- AGGCCTTCTCATCTAACCGCACAGACGTTGACATTCCAGGTGGAGGAGAA
EX768373       <-- AGGCCTTCTCATCTAACCGCACAGACGTTGACATTCCAGGTGGAGGAGAA
EX900915       <-- AGGCCTTTTCATCTAACCGCACAGACGTTGACATTCCAGGTGGAGGAGAA
EX900710       <-- AGGCCTTCTCATCTAACCGCACAGACGTTGACATTCCAGGTGGAGGAGAA
EY933739       <-- AGGCCTTCTCATCTAACCGCACAGACGTTGACATTCCAGGTGGAGGAGAA
EY901910       <-- AGGCCCTCTCATCTAACCGCACAGACGTTGACATTCCAGGTGGATGAGAA
EY936942       <-- AGGCCTTCTCATCTAACCGCACAGACGTTGACATTCCAGGTGGAGGAGAA
EY927917       <-- AGGCCTTCTCATCTAACCGCACAGACGTTGACATTCCAGGTGGAGGAGAA
EX891105       <-- AGGCCTTTTCATCTAACCGCACAGACGTTGACATTCCAGGTGGAGGAGAA
EX767096       <-- AGGCCTTCTCATCTAACCGCACAGACGTTGACATTCCAGGTGGAGGAGAA
FD958776       <-- AGGCCTTCTCATCTAACCGCACAGACGTTGACATTCCAGGTGGAGGAGAA
EY903835       <-- AGGCCTTCTCATCTAACCGCACAGACGTTGACATTCCAGGTGGAGGAGAA
FD969319       <-- AGGCCTTTTCATCTAACCGCACAGACGTTGACATTCCAGGTGGAGGAGAA
EX894036       <-- AGGCCTTTTCATCTAACCGCACAGACGTTGACATTCCAGGTGGAGGAGAA
FD578245       --> AGGCCTTCTC-TCTAACCGCACAGACGTTGACATTCCAGGTGGAGGAGAA
EX896845       --> AGGCCTTCTCATCTAACCGCACAGACGTTGACATTCCAGGTGGAGGAGAA
EX904815       --> AGGCCTTCTCATCTAACCGCACAGACGTTGACATTCCAGGTGGAGGAGAA
EX886803       --> AGGCCTTCTCATCTAACCGCACAGACGTTGACATTCCAGGTGGAGGAGAA
EX897093       --> AGGCCTTCTCATCTAACCGCACAGACGTTGACATTCCAGGTGGAGGAGAA
EY941346       --> ..................................................
EX746494       --> AGGCCTTCTCATCTAACCGCACAGACGTTGACATTCCAGGTGGAGGAGAA
EX762929       --> AGGCCTTCTCATCTAACCGCACAGACGTTGACATTCCAGGTGGAGGAGAA
EY908062       --> AGGCCTTCTCATCTAACCGCACAGACGTTGACATTCCAGGTGGAGGAGAA
FD962181       --> AGGCCTTCTCATCTAACCGCACAGACGTTGACATTCCAGGTGGAGGAGAA
FD550209       --> AGGCCTTCTCATCTAACCGCACAGACGTTGACATTCCAGGTGGAGGAGAA
EX890545       --> AGGCCTTCTCATCTAACCGCACAGACGTTGACATTCCAGGTGGAGGAGAA
EY905185       --> AGGCCTTCTCATCTAACCGCACAGACGTTGACATTCCAGGTGGAGGAGAA
EY905484       --> AGGCCCTCTCATCTAACCGCACAGACGTTGACATTCCAGGTGGATGAGAA
EY932121       --> AGGCCTTCTCATCTAACCGCACAGACGTTGACATTCCAGGTGGAGGAGAA
FD973669       --> AGGCCTTCTCATCTAACCGCACAGACGTTGACATTCCAGGTGGAGGAGAA
FD578934       --> AGGCCTTCTCATCTAACCGCACAGACGTTGACATTCCAGGTGGAGGAGAA
EX764465       --> AGGCCTTCTCATCTAACCGCACAGACGTTGACATTCCAGGTGGAGGAGAA
EY937455       --> AGGCCTTCTCATCTAACCGCACAGACGTTGACATTCCAGGTGGAGGAGAA
EY924472       --> ..................................................

               451    -    501
UN21681        --> AGTCTTGACAAACTCTACGACAGATGTACATCTGCATTACAGAGAATCGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX750888       <-- AGTCTTGACAAACTCTACGACAGATGTACATCTGCATTACAGAGAATCGG
EX768373       <-- AGTCTTGACAAACTCTACGACAGATGTACATCTGCATTACAGAGAATCGG
EX900915       <-- AGTCTTGACAAACTTTACGACAGATGTACATCTGCATTACAGAGAATCGG
EX900710       <-- AGTCTTGACAAACTTTACGACAGATGTACATCTGCATTACAGAGAATCGG
EY933739       <-- AGTCTTGACAAACTCTACGACAGATGTACATCTGCATTACAGAGAATCGG
EY901910       <-- AGTCTTGACAAACTTTACGACAGATGCACATCTGCATTACAGAGAATCGG
EY936942       <-- AGTCTTGACAAACTTTACGACAGATGTACATCTGCATTACAGAGAATCGG
EY927917       <-- AGTCTTGACAAACTCTACGACAGATGTACATCTGCATTACAGAGAATCGG
EX891105       <-- AGTCTTGACAAACTTTACGACAGATGTACATCTGCATTACAGAGAATCGG
EX767096       <-- AGTCTTGACAAACTCTACGACAGATGTACATCTGCATTACAGAGAATCGG
FD958776       <-- AGTCTTGACAAACTTTACGACAGATGTACATTTGCATTACAGAGAATCGG
EY903835       <-- AGTCTTGACAAACTCTACGACAGATGTACATCTGCATTACAGAGAATCGG
FD969319       <-- AGTCTTGACAAACTTTACGACAGATGCACATTTGCATTACAGAGAATCGG
EX894036       <-- AGTCTTGACAAACTTTACGACAGATGTACATCTGCATTACAGAGAATCGG
FD578245       --> AGTCTTGACAAACTCTACGACAGATGTACATCTGCATTACAGAGAATCGG
EX896845       --> AGTCTTGACAAACTCTACGACAGATGTACATCTGCATTACAGAGAATCGG
EX904815       --> AGTCTTGACAAGCTCTACGACAGATGTACATCTGCATTACAGAGAATCGG
EX886803       --> AGTCTTGACAAACTCTACGACAGATGTACATCTGCATTACAGAGAATCGG
EX897093       --> AGTCTTGACAAACTCTACGACAGATGTACATCTGCATTACAGAGAATCGG
EY941346       --> ..................................................
EX746494       --> AGTCTTGACAAACTCTACGACAGATGTACATCTGCATTACAGAGAATCGG
EX762929       --> AGTCTTGACAAACTCTACGACAGATGTACATCTGCATTACAGAGAATCGG
EY908062       --> AGTCTTGACAAACTCTACGACAGATGTACATCTGCATTACAGAGAATCGG
FD962181       --> AGTCTTGACAAACTCTACGACAGATGTACATCTGCATTACAGAGAATCGG
FD550209       --> AGTCTTGACAAACTCTACGACAGATGTACATCTGCATTACAGAGAATCGG
EX890545       --> AGTCTTGACAAACTCTACGACAGATGTACATCTGCATTACAGAGAATCGG
EY905185       --> AGTCTTGACAAACTCTACGACAGATGCACATCTGCATTACAGAGAATCGG
EY905484       --> AGTCTTGACAAACTCTACGACAGATGCACATCTGCATTACAGAGAATCGG
EY932121       --> AGTCTTGACAAACTCTACGACAGATGTACATCTGCATTACAGAGAATCGG
FD973669       --> AGTCTTGACAAACTCTACGACAGATGCACATCTGCATTACAGAGAATCGG
FD578934       --> AGTCTTGACAAACTCTACGACAGATGTACATCTGCATTACAGAGAATCGG
EX764465       --> AGTCTTGACAAACTCTACGACAGATGTACATCTGCATTACAGAGAATCGG
EY937455       --> AGTCTTGACAAACTCTACGACAGATGTACATCTGCATTACAGAGAATCGG
EY924472       --> ..................................................

               501    -    551
UN21681        --> CGACAAACATCAAGGTGAAAGAGTGGTGGTAGTGACTCATGGAGGTGTCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX750888       <-- CGACAAACATCAAGGTGAAAGAGTGGTGGTAGTGACTCATGGAGGTGTCA
EX768373       <-- CGACAAACATCAAGGTGAAAGAGTGGTGGTAGTGACTCATGGGGGTGTCA
EX900915       <-- CGACAAACATCAAGGTGAAAGAGTGGTGGTAGTGACTCATGGAGGTGTCA
EX900710       <-- CGACAAACATCAAGGTGAAAGAGTGGTGGTAGTGACTCATGGAGGTGTCA
EY933739       <-- CGACAAACATCAAGGTGAAAGAGTGGTGGTAGTGACTCATGGAGGTGTCA
EY901910       <-- CGACAAACATCAAGGTGAAAGAGTGGTGGTAGTGACTCATGGAGGCGTGA
EY936942       <-- CGACAAACATCAAGGTGAAAGAGTGGTGGTAGTGACTCATGGAGGTGTCA
EY927917       <-- CGACAAACATCAAGGTGAAAGAGTGGTGGTAGTGACTCATGGAGGTGTCA
EX891105       <-- CGACAAACATCAAGGTGAAAGAGTGGTGGTAGTGACTCATGGAGGTGTCA
EX767096       <-- CGACAAACATCAAGGTGAAATAGTGGTGGTAGTGACTCATGGAGGTGTCA
FD958776       <-- CGACAAACATCAAGGTGAAAGAGTGGTGGTAGTGACTCATGGAGGTGTCA
EY903835       <-- CGACAAACATCAAGGACAAAGAGTGGTGGTAGTGACTCATGGAGGTGTCA
FD969319       <-- CGACAAACATCAAGGTGAAAGAGTGGTGGTAGTGACTCATGGAGGTGTGA
EX894036       <-- CGACAAACATCAAGGTGAAAGAGTGGTGGTAGTGACTCATGGAGGTGTCA
FD578245       --> CGACAAACATCAAGGTGAAAGAGTGGTGGTAGTGACTCATGGAGGTGTCA
EX896845       --> CGACAAACATCAAGGTGAAAGAGTGGTGGTAGTGACTCATGGAGGTGTCA
EX904815       --> CGACAAACATCAAGGTGAAAGAGTGGTGGTAGTGACTCATGGAGGTGTCA
EX886803       --> CGACAAACATCAAGGTGAAAGAGTGGTGGTAGTGACTCATGGAGGTGTCA
EX897093       --> CGACAAACATCAAGGTGAAAGAGTGGTGGTAGTGACTCATGGAGGTGTCA
EY941346       --> ..................................................
EX746494       --> CGACAAACATCAAGGTGAAAGAGTGGTGGTAGTGACTCATGGAGGTGTCA
EX762929       --> CGACAAACATCAAGGTGAAATAGTGGTGGTAGTGACTCATGGAGGTGTCA
EY908062       --> CGACAAACATCAAGGACAAAGAGTGGTGGTAGTGACTCATGGAGGTGTCA
FD962181       --> CGACAAACATCAAGGTGAAAGAGTGGTGGTAGTGACTCATGGAGGTGTCA
FD550209       --> CGACAAACATCAAGGTGAAAGAGTGGTGGTAGTGACTCATGGAGGTGTCA
EX890545       --> CGACAAACATCAAGGTGAAAGAGTGGTGGTAGTGACTCATGGAGGTGTCA
EY905185       --> CGACAAACATCAAGGTGAAAGAGTGGTGGTAGTGACTCATGGAGGTGTGA
EY905484       --> CGACAAACATCAAGGTGAAAGAGTGGTGGTAGTGACTCATGGAGGCGTGA
EY932121       --> CGACAAACATCAAGGTGAAAGAGTGGTGGTAGTGACTCATGGAGGTGTCA
FD973669       --> CGACAAACATCAAGGTGAAAGAGTGGTGGTAGTGACTCATGGAGGTGTGA
FD578934       --> CGACAAACATCAAGGTGAAAGAGTGGTGGTAGTGACTCATGGAGGTGTCA
EX764465       --> CGACAAACATCAAGGTGAAAGAGTGGTGGTAGTGACTCATGGGGGTGTCA
EY937455       --> CGACAAACATCAAGGTGAAAGAGTGGTGGTAGTGACTCATGGAGGTGTCA
EY924472       --> ....gAACATCAAGGTGAAAGAGTGGTGGTAGTGACTCATGGAGGTGTCA

               551    -    601
UN21681        --> TTCGATCTCTCTACGAGAGAGCTCGTCCAAGTGCACGAAAAGTTGAAAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX750888       <-- TTCGATCTCTCTACGAGAGAGCTCGTCCAAGTGCACGAAAAGTTGAAAAG  Raphanus raphanistrum subsp. maritimus
EX768373       <-- TTCGATCTCTCTACGAGAGAGCTCGTCCAAGTGCACGAAAAGTTGAAAAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX900915       <-- TTCGATCTCTCTACGAGAGAGGTCGTCCAAGTGCACGAAAAGTTGAAAAG  Raphanus sativus cv Early Scarlet Globe
EX900710       <-- TTCGATCTCTCTACGAGAGAGGTCGTCCAAGTGCACGAAAAGTTGAAAAG  Raphanus sativus cv Early Scarlet Globe
EY933739       <-- TTCGATCTCTCTACGAGAGAGGTCGTCCAAGTGCACGAAAAGTTGAAAAG  Raphanus sativus cv Early Scarlet Globe
EY901910       <-- TCCGATCTCTCTACGAGAGAGCTCGTCCAAGTGCACGAAAAGTTGAAAAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY936942       <-- TTCGATCTCTCTACGAGAGAGGTCGTCCAAGTGCACGAAAAGTTGAAAAG  Raphanus sativus cv Early Scarlet Globe
EY927917       <-- TTCGATCTCTCTACGAGAGAGCTCGTCCAAGTGCACGAAAAGTTGAAAAG  Raphanus sativus var. oleiformis
EX891105       <-- TTCGATCTCTCTACGAGAGAGGTCGTCCAAGTGCACGAAAAGTTGAAAAG  Raphanus sativus var. oleiformis
EX767096       <-- TTCGATCTCTTTACGAGAGAGCTCGTCCAAGTGCACGAAAAGTTGAAAAG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD958776       <-- TTCGATCTCTTTACGAGAGAGCTCGTCCAAGTGCACGAAAAGTTGAAAAG  Raphanus raphanistrum subsp. maritimus
EY903835       <-- TTCGATCTCTCTACGAGAGAGCTCGTCCAAGTGCACGAAAAGTTGAAAAG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD969319       <-- TCCGATCTCTTTACGAGAGAGCTCGTCCAAGTGCACGAAAAGTTGAAAAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX894036       <-- TTCGATCTCTCTACGAGAGAGCTCGTCCAAGTGCACGAAAAGTTGAAAAG  Raphanus sativus var. oleiformis
FD578245       --> TTCGATCTCTCTACGAGAGAGGTCGTCCAAGTGCACGAAAAGTTGAAAAG  Raphanus sativus cv Rat-Tail Radish #3870
EX896845       --> TTCGATCTCTCTACGAGAGAGGTCGTCCAAGTGCACGAAAAGTTGAAAAG  Raphanus sativus cv Early Scarlet Globe
EX904815       --> TTCGATCTCTCTACGAGAGAGGTCGTCCAAGTGCACGAAAAGTTGAAAAG  Raphanus sativus cv Rat-Tail Radish #3870
EX886803       --> TTCGATCTCTCTACGAGAGAGGTCGTCCAAGTGCACGAAAAGTTGAAAAG  Raphanus sativus var. oleiformis
EX897093       --> TTCGATCTCTCTACGAGAGAGGTCGTCCAAGTGCACGAAAAGTTGAAAAG  Raphanus sativus cv Early Scarlet Globe
EY941346       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EX746494       --> TTCGATCTCTCTACGAGAGAGCTCGTCCAAGTGCACGAAAAGTTGAAAAG  Raphanus raphanistrum subsp. maritimus
EX762929       --> TTCGATCTCTCTACGAGAGAGCTCGTCCAAGTGCA...............  Raphanus raphanistrum subsp. raphanistrum (NY)
EY908062       --> TTCGATCTCTCTACGAGAGAGCTCGTCCAAGTGCACGAAAAGTTGAAAAG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD962181       --> TTCGATCTCTCTACGAGAGAGCTCGTCCAAGTGCACGAAAAGTTGAAAAG  Raphanus raphanistrum subsp. maritimus
FD550209       --> TTCGATCTCTCTACGAGAGAGCTCGTCCAAGTGCACGAAAAGTTGAAAAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX890545       --> TTCGATCTCTCTACGAGAGAGCTCGTCCAAGTGCACGAAAAGTTGAAAAG  Raphanus sativus var. oleiformis
EY905185       --> TCCGATCTCTCTACGAGAGAGCTCGTCCAAGTGCACGAAAAGTTGAAAAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY905484       --> TCCGATCTCTCTACGAGAGAGCTCGTCCAAGTGCACGAAAAGTTGAAAAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY932121       --> TTCGATCTCTCTACGAGAGAGCTCGTCCAAGTGCACGAAAAGTTGAAAAG  Raphanus sativus var. oleiformis
FD973669       --> TCCGATCTCTCTACGAGAGAGCTCGTCCAAGTGCACGAAAAGTTGAAAAG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD578934       --> TTCGATCTCTCTACGAGAGAGGTCGTCCAAGTGCACGAAAAGTTGAAAAG  Raphanus sativus cv Rat-Tail Radish #3870
EX764465       --> TTCGATCTCTCTACGAGAGAGCTCGTCCAAGTGCACGAAAAGTTGAAAAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY937455       --> TTCGATCTCTCTACGAGAGAGGTCGTCCAAGTGCACGAAAAGTTGAAAAG  Raphanus sativus cv Early Scarlet Globe
EY924472       --> TTCGATCTCTCTACGAGAGAGCTCGTCCAAGTGCACGAAAAGTTGAAAAG  Raphanus raphanistrum subsp. landra

               601    -    651
UN21681        --> ATTCTCAA-CACATCGGTCAATGTGTTCCGTTTATTCGACGGAGACAAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX750888       <-- ATTCTCAA-CACATCGGTCAATGTGTTCCGTTTATTCGACGGAGACAAAT
EX768373       <-- ATTCTCAA-CACATCGGTCAATGTGTTCCGTTTATTCGACGGAGACAAAT
EX900915       <-- ATTCTCAA-CACATCGGTCAATGTGTTCCGTTTATTCGACGGAGACAAAT
EX900710       <-- ATTCTCAA-CACATCGGTCAATGTGTTCCGTTTATTCGACGGAGACAAAT
EY933739       <-- ATTCTCAA-CACATCGGTCAATGTGTTCCGTTTATTCGACGGAGACAAAT
EY901910       <-- ATTCTCAA-CACATCGGTCAATGTGTTCCGTTTATTCGACGGAGACAAAT
EY936942       <-- ATTCTCAA-CACATCGGTCAATGTGTTCCGTTTATTCGACGGAGACAAAT
EY927917       <-- ATTCTCAA-CACATCGGTCAATGTGTTCCGTTTATTCGACGGAGACAAAT
EX891105       <-- ATTCTCAA-CACATCGTTCAATGTGTTCCGTTTATTCGATGGAGACAAAT
EX767096       <-- ATTCTCAA-CACATCGGTCAATGTGTTCCGTTTATTCGAGGGAGACAAAT
FD958776       <-- ATTCTCAA-CACATCGGTCAATGTGTTCCGTTTATTCGACGAAGACAAAT
EY903835       <-- ATTCTCAA-CACATCGGTCAATGTGTTCCGTTTATTCGACGGAGACAAAT
FD969319       <-- ATTCTCAA-CACATCGGTCAATGTGTTCCGTTTATTCGACGGAGACAAAT
EX894036       <-- ATTCTCAA-CACATCGGTCAATGTGTTCCGTTTATTCGACGGAGACAAAT
FD578245       --> ATTCTCAA-CACATCGGTCAATGTGTTCCGTTTATTCGACGGAGACAAAT
EX896845       --> ATTCTCAA-CACATCGGTCAATGTGTTCCGTTTATTCGACGGAGACAAAT
EX904815       --> ATTCTCAA-CACATCGGTCAATGTGTTCCGTTTATTCGACGGAGACAAAT
EX886803       --> ATTCTCAA-CACATCGTTCAATGTGTTCCGTTTATTCGATGGAGACAAAT
EX897093       --> ATTCTCAA-CACATCGGTCAATGTGTTCCGTTTATTCGACGGAGACAAAT
EY941346       --> ..................................................
EX746494       --> ATTCTCAA-CACATCGGTCAATGTGTTCCGTTTATTCGACGGAGACAAAT
EX762929       --> ..................................................
EY908062       --> ATTCTCAA-CACATCGGTCAATGTGTTCCGTTTATTCGACGGAGACAAAT
FD962181       --> ATTCTCAAACACATCGGTCAATGT..........................
FD550209       --> ATTCTCAA-CACATCGGTCAATGTGTTCCGTTTATTCGAGGGAGACAAAT
EX890545       --> ATTCTCAA-CACATCGGTCAATGTGTTCCGTTTATTCGACGGAGACAAAT
EY905185       --> ATTCTCAA-CACATCGGTCAATGTGTTCCGTTTATTCGACGGAGACAAAT
EY905484       --> ATTCTCAA-CACATCGGTCAATGTGTTCCGTTTATTCGACGGAGACAAAT
EY932121       --> ATTCTCAA-CACATCGGTCAATGTGTTCCGTTTATTCGACGGAGACAAAT
FD973669       --> ATTCTCAA-CACATCGGTCAATGTGTTCCGTTTATTC.............
FD578934       --> ATTCTCAA-CACATCGGTCAATGTGTTCCGTTTATTCGACGGAGACAAAT
EX764465       --> ATTCTCAA-CACATCGGTCAATGTGTTCCGTTTATTCGACG-AGACAA-T
EY937455       --> ATTCTCAA-CACATCGGTCAATGTGTTCCGTTTATTCGACGGAGACAAAT
EY924472       --> ATTCTCAA-CACATCGGTCAATGTGTTCCGTTTATTCGACGGAGACAAAT

               651    -    701
UN21681        --> GGACAATCCAAGTTTGGGG-AGATGTGTCTCATTTGGACCAAACCGGTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX750888       <-- GGACAATCCAAGTTTGGGG-AGATGTGTCTCATTTGGACCAAACCGGTTT
EX768373       <-- GGACAATCCAAGTTTGGGG-AGATGTGTCTCATTTGGACCAAACCGGTTT
EX900915       <-- GGACAATCCAAGTTTGGGG-AGATGTGTCTCATTTGGACCAAACCGGTTT
EX900710       <-- GGACAATCCAAGTTTGGGG-AGATGTGTCTCATTTGGACCAAACCGGTTT
EY933739       <-- GGACAATCCAAGTTTGGGG-AGATGTGTCTCATTTGGACCAAACCGGTTT
EY901910       <-- GGACAATCCAAGTTTGGGG-AGATGTGTCTCATTTGGACCAAACCGGTTT
EY936942       <-- GGACAATCCAAGTTTGGGA-AGATGTGTCTCATTTGGACCAAACCGGTTT
EY927917       <-- GGACAATCCAAGTTTGGGG-AGATGTGTCTCATTTGGACCAGACCGGTTT
EX891105       <-- GGACAATCCAAGTTTGGGG-AGATGTGTCTCATTTGGACCAAACCGGTTT
EX767096       <-- GGACAATCCAAGTTTGGGG-AGATGTGTCGCATTTGGACCAAACCGGTTT
FD958776       <-- GGACAATCCAAGTTTGGGG-AGATGTGTTTCATTTGGACCAAACCGGTTT
EY903835       <-- GGACAATCCAAGTTTGGGG-AGATGTGTCTCATTTGGACCAAACCGGTTT
FD969319       <-- GGACAATCCAAGTTTGGGG-AGATGTGTTTCATTTGGACCAAACCGGTTT
EX894036       <-- GGACAATCCAAGTTTGGGG-AGATGTGTCTCATTTGGACCAGACCGGTTT
FD578245       --> GGACAATCCAAGTTTGGGG-AGATGTGTCTCATTTGGACCAAACCGGTTT
EX896845       --> GGACAATCCAAGTTTGGGG-AGATGTGTCTCATTTGGACCAAACCGGTTT
EX904815       --> GGACAATCCAAGTTTGGGG-AGATGTGTCTCATTTGGACCAAACCGGTTT
EX886803       --> GGACAATCCAAGTTTGGGG-AGATGTGTCTCATTTGGACCAAACCGGTTT
EX897093       --> GGACAATCCAAG......................................
EY941346       --> ..................................................
EX746494       --> GGACAATCCAAGTTTGGGGGAGATGTGTCTCATTTGGACCAAACCGGTT-
EX762929       --> ..................................................
EY908062       --> GGACAATCCAAGTTTGGGG-AGATGTGTCTCATTTGGACCAAACCGGTTT
FD962181       --> ..................................................
FD550209       --> GG................................................
EX890545       --> GGACAATCCAAGTTTGGGGGAGATGTGTCTCATTTGGACCAGACCGGTTT
EY905185       --> GGACAATCCAAGTTTGGGG-AGATGTGTCTCATTTGGACCAAACCGGTTT
EY905484       --> GGACAATCCAAGTTTGGGG-AGATGTGTCTCATTTGGACCAAACCGGTTT
EY932121       --> GGACAATCCAAGTTTGGGG-AGATGTGTCTCATTTGGACCAGACCGGTTT
FD973669       --> ..................................................
FD578934       --> GGACAATCCAAGTTTGGGG-AGATGTGTCTCATTTGGACCAAACCGGTTT
EX764465       --> GGACAATCCAAGTTTGGGG-AGATGTGTCTCATTgga.............
EY937455       --> GGACAATCCAAGTTTGGGGGAGATGTGTCTCATTTGGACCAAACCGGTTT
EY924472       --> GGACAATCCAAGTTTGGGG-AGATGTGTCTCATTTGGACCAAACCGGTTT

               701    -    751
UN21681        --> CTTGCAATCCGGTTTTGGTGGTGACAGAACCTCTGGTTAAGATTCAGTGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX750888       <-- CTTGCAATCCGGTTTTGGCGGTGACAGAACCTCTGGTTAAGATTCAATGA  Raphanus raphanistrum subsp. maritimus
EX768373       <-- CTTGCAATCCGGTTTTGGCGGTGACAGAACCTCTGGTTAAGATTCAATGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX900915       <-- CTTGCAATCCGGTTTTGGTGGTGACAGAACCTCTGGTTAAGATTCAGTGA  Raphanus sativus cv Early Scarlet Globe
EX900710       <-- CTTGCAATCCGGTTTTGGTGGTGACAGAACCTCTGGTTAAGATTCAGTGA  Raphanus sativus cv Early Scarlet Globe
EY933739       <-- CTTGCAATCCGGTTTTGGTGGTGACAGAACCTCTGGTTAAGATTCAGTGA  Raphanus sativus cv Early Scarlet Globe
EY901910       <-- CTTGCAATCCGGTTTTGGTGGTGACAGAACCTCCGGTTAAGATTCAATGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY936942       <-- CTTGCAATCCGGTTTTGGTGGTGACAGAACCTCTGGTTAAGATTCAGTGA  Raphanus sativus cv Early Scarlet Globe
EY927917       <-- CTTGCAATCCGGTTTTGGTGGTGACAGAACCTCTGGTTAAGATTCAGTGA  Raphanus sativus var. oleiformis
EX891105       <-- CTTGCAATCCGGTTTTGGTGGTGACAGAACCTCTGGTTAAGATTCAGTGA  Raphanus sativus var. oleiformis
EX767096       <-- CTTGCAATCCGGTTTTGGTGGTGACAGAACCTCCGGTTAAGATTCAATGA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD958776       <-- CTTGCAATCCGGTTTTGGCGGTGACAGAACCTCTGGTTAAGATTCAATGA  Raphanus raphanistrum subsp. maritimus
EY903835       <-- CTTGCAATCCGGTTTTGGTGGTGACAGAACCTCTGGTTAAGATTCAGTGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD969319       <-- CTTGCAATCCGGTTTTGGTGGTGACAGAACCTCCGGTTAAGATTCAATGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX894036       <-- CTTGCAATCCGGTTTTGGTGGTGA..........................  Raphanus sativus var. oleiformis
FD578245       --> CTTGCAATCCGGTTTTGGTGGTGACAGAACCTCTGGTTAAGATTCAGTGA  Raphanus sativus cv Rat-Tail Radish #3870
EX896845       --> CTTGCA-TCCGGTTTTGGTGGTGACAGAACCTCTGGTTAAGATTCAG...  Raphanus sativus cv Early Scarlet Globe
EX904815       --> CTTGCAATCCGGTTTTGGTGGTGACAGAACCTCTGGTTAAGATTCAGTGA  Raphanus sativus cv Rat-Tail Radish #3870
EX886803       --> CTTGCAATCCGGTTTTGGTGGTGACAGAACCTCTGGTTAAGATTCAGTGA  Raphanus sativus var. oleiformis
EX897093       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EY941346       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EX746494       --> CTTGCAATCCGGTTTT..................................  Raphanus raphanistrum subsp. maritimus
EX762929       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY908062       --> CTTGCAA...........................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD962181       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD550209       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX890545       --> CTTGCAATCCGGTTTTGGTGGTGACAGAACCTCTGGTTAAGATTCAGTGA  Raphanus sativus var. oleiformis
EY905185       --> CTTGCAATCCGGTTTTGGTGGTGACAGAACCTCCGGTTAAGATTCAa...  Raphanus raphanistrum subsp. raphanistrum (MS)
EY905484       --> CTTGCAATCCGGTTTTGGTGGTGACAGAACCTC-CGTTAAGATTCAATGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY932121       --> CTTGCAATCCGGTTTTGGTGGTGACAGA......................  Raphanus sativus var. oleiformis
FD973669       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD578934       --> CTTGCAATCCGGTTTTGGTGGTGACAGAACCTCTGGTTAAGATTCAGTGA  Raphanus sativus cv Rat-Tail Radish #3870
EX764465       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY937455       --> CTTGCAATCCGGTTTTGGTGGTGACAGAACCTCTGGTTAAGATTCAGTGA  Raphanus sativus cv Early Scarlet Globe
EY924472       --> CTTGCAATCCGGTTTTGGCGGTGACAGAACCTCTGGTTAAGATTCAATGA  Raphanus raphanistrum subsp. landra

               751    -    801
UN21681        --> CTCTTTCCACTGAGGTTTT-CTGTAATTTAAA-TTTGACTCTGTTACTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX750888       <-- CTCTTTCCACTGAGGTTTTTCTGTAATTTAAA-TTTGACTCTGTTACTTT  Raphanus raphanistrum subsp. maritimus
EX768373       <-- CTCTTTCCACTGAGGTTTTTCTGTAATTTAAA-TTTGACTCTGTTACTTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX900915       <-- CTCTTTCCACTGAGGTTTT-CTGTAATTTAAA-TTTGACTCTGTTACTTT  Raphanus sativus cv Early Scarlet Globe
EX900710       <-- CTCTTTCCACTGAGGTTTT-CTGTAATTTAAA-TTTGACTCTGTTACTTT  Raphanus sativus cv Early Scarlet Globe
EY933739       <-- CTCTTTCCACTGAGGTTTT-CTGTAATTTAAA-TTTGACTCTGTTACTTT  Raphanus sativus cv Early Scarlet Globe
EY901910       <-- CTCTTTCCACTGAGGTTTT-CTGTAATTTAAA-TTTGACTCCGTTACTTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY936942       <-- CTCTTTCCACTGAGGTTTT-CTGTAATTTAAA-TTTGACTCTGTTACTTT  Raphanus sativus cv Early Scarlet Globe
EY927917       <-- CTCTTTCCACTGAGGTTTT-CTGTAATTTAAA-TTTGTCTCTGTTACTTT  Raphanus sativus var. oleiformis
EX891105       <-- CTCTTTCCACTGAGGTTTT-CTGTAATTTAAA-TTTGACTCTGTTACTTT  Raphanus sativus var. oleiformis
EX767096       <-- CTCTTTCCACTGAGGTTTT-CTGTAATTTAAAATTTGACTCTGTTACTTT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD958776       <-- CTCTTTCCACTGAGGTTTTTCTGTAATTTAAA-TTTGACTCTGTTACTTT  Raphanus raphanistrum subsp. maritimus
EY903835       <-- CTCTTTCCACTGAGGTTTT-CTGTAATTTAAA-TTTGACTCTGTTACTTT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD969319       <-- CTCTTTCCACTGAGGTTTT-CTGTAATTTAAA-TTTGACTCCGTTACTTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX894036       <-- ..................................................  Raphanus sativus var. oleiformis
FD578245       --> CTCTTTCCACTGAG-TTTT-CTGTA-TTTAAA-TTTG.............  Raphanus sativus cv Rat-Tail Radish #3870
EX896845       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EX904815       --> CTCTTTCCACTGAG-TTTT-CTGTA.........................  Raphanus sativus cv Rat-Tail Radish #3870
EX886803       --> CTCTTTCCACTGAG....................................  Raphanus sativus var. oleiformis
EX897093       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EY941346       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EX746494       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EX762929       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY908062       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD962181       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD550209       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX890545       --> CTCTT.............................................  Raphanus sativus var. oleiformis
EY905185       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY905484       --> CTC...............................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY932121       --> ..................................................  Raphanus sativus var. oleiformis
FD973669       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD578934       --> CTCTTTCCACTGAGGTTTT-CTGTAATTTAA--TTTGACTCTGTTACT..  Raphanus sativus cv Rat-Tail Radish #3870
EX764465       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY937455       --> C.................................................  Raphanus sativus cv Early Scarlet Globe
EY924472       --> CTCTTTCCACTGAGGTTTTTCTGTAATTTAAA-TTTGACTCTGTTACTTT  Raphanus raphanistrum subsp. landra

               801    -    851
UN21681        --> CTTCTTTTGCAATTTGACCTCATAACTTTGAGGTTATCCCGATTTAGCCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX750888       <-- CTTCTTTTGCAATTTGACCTCATAACTTTTAGGTCATCCCGATTTAGCCT  Raphanus raphanistrum subsp. maritimus
EX768373       <-- CTTCTTTTGCAATTTGACCTCATAACTTTTAGGTTATCCCGATTTAGCCT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX900915       <-- CTTCTTTTGCAATTTGACCTCATAACTTTGAGGCTATCCCGATTTAGCCT  Raphanus sativus cv Early Scarlet Globe
EX900710       <-- CTTCTTTTGCAATTTGACCTCATAACTTTGAGGCTATCCCGATTTAGCCT  Raphanus sativus cv Early Scarlet Globe
EY933739       <-- CTTCTTTTGCAATTTGACCTCATAACTTTGAGGCTATCCCGATTTAGCCT  Raphanus sativus cv Early Scarlet Globe
EY901910       <-- CTTCTTTTGCAATTTGACCTCATAACTTTGAGGTTATCCCGATTTAGCCT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY936942       <-- CTTCTTTTGCAATTTGACCTCATAACTTTGAGGCTATCCCGATTTAGCCT  Raphanus sativus cv Early Scarlet Globe
EY927917       <-- CTTCTTTTGCAATTTGACCTCATAACTTTGAGGTTATCCCGATTTAGCCT  Raphanus sativus var. oleiformis
EX891105       <-- CTTCTTTTGCAATTTGACCTCATAACTTTGAGGCTATCCCGATTTAGCCT  Raphanus sativus var. oleiformis
EX767096       <-- CTTCTTTTGCAATTTGACCTCATAACTTTGAGGTTATCCCGATTTAGCCT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD958776       <-- TTTTTTTTGCAATTTGACCTCATAACTTTTAGGTTATCCCGATTTAGCCT  Raphanus raphanistrum subsp. maritimus
EY903835       <-- CTTCTTTTGCAATTTGACCTCATAACTTTGAGGTTATCCCGATTTAGCCT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD969319       <-- TTTCTTTTGCAATTTGACCTCATAACTTTGAGGTTATCCCGATTTAGCCT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX894036       <-- ..................................................  Raphanus sativus var. oleiformis
FD578245       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EX896845       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EX904815       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EX886803       --> ..................................................  Raphanus sativus var. oleiformis
EX897093       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EY941346       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EX746494       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EX762929       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY908062       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD962181       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD550209       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX890545       --> ..................................................  Raphanus sativus var. oleiformis
EY905185       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY905484       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY932121       --> ..................................................  Raphanus sativus var. oleiformis
FD973669       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD578934       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EX764465       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY937455       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EY924472       --> CTTCTTTTGCAATTTGACCTCATAACTTTTAGGTTATCCCGATTTAGCCT  Raphanus raphanistrum subsp. landra

               851    -    901
UN21681        --> GTAATTGGGAGGATTAATAAAGTAATTGCTATAAATTGAACGTGATGCAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX750888       <-- GTAATTGGGAGGATTAATAAAGTAATTGCTAT..................  Raphanus raphanistrum subsp. maritimus
EX768373       <-- GTAATTGGGAGGATTAATAAAGTAATTGCTAT..................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX900915       <-- GTAATTGGGAGGATTGATAAAGTAACTGCTAg..................  Raphanus sativus cv Early Scarlet Globe
EX900710       <-- GTAATTGGGAGGATTAATAAAGTAACTGCTATAAATTGAACGTGATGCAT  Raphanus sativus cv Early Scarlet Globe
EY933739       <-- GTAATTGGGAGGATTAATAAAGTAACTGCTATAAATTGAACGTGATGCAT  Raphanus sativus cv Early Scarlet Globe
EY901910       <-- GTAATTGGGAGGACTAATAAAGTAATTGCTATAAATTGAACGTGATGCAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY936942       <-- GTAATTGGGAGGATTAATAAAGTAACTGCTATAAATTGAACGTGATGCAT  Raphanus sativus cv Early Scarlet Globe
EY927917       <-- GTAATTGGGAGGATTAATAAAGTAATTGCTATAAATTGAACGTGATGCAT  Raphanus sativus var. oleiformis
EX891105       <-- GTAATTGGGAGGATTAATAAAGTAACTGCTATAAATTGAACGTGATGCAT  Raphanus sativus var. oleiformis
EX767096       <-- GTAATTGGGAGGATTAATAAAGTAATTGCTATAAATTGAACGTGATGCAT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD958776       <-- GTAATTGGGAGGATTAATAAAGTAATTGCTAT..................  Raphanus raphanistrum subsp. maritimus
EY903835       <-- GTAATTGGGAGGATTAATAAAGTAATTGCTAT..................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD969319       <-- GTAATTGGGAGGACTAATAAAGTAATTGCTAT..................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX894036       <-- ..................................................  Raphanus sativus var. oleiformis
FD578245       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EX896845       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EX904815       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EX886803       --> ..................................................  Raphanus sativus var. oleiformis
EX897093       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EY941346       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EX746494       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EX762929       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY908062       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD962181       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD550209       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX890545       --> ..................................................  Raphanus sativus var. oleiformis
EY905185       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY905484       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY932121       --> ..................................................  Raphanus sativus var. oleiformis
FD973669       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD578934       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EX764465       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY937455       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EY924472       --> GTAATTGGGAGGATTAATAAAGTAATTGCTATAAATTGAACGTGATGCAT  Raphanus raphanistrum subsp. landra

               901    -    951
UN21681        --> AAAATATATCATCATTTTCTAGTTAAGAAATCATTTTAGTTTTCAATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX750888       <-- ................................................
EX768373       <-- ................................................
EX900915       <-- ................................................
EX900710       <-- ................................................
EY933739       <-- AAAATATATCATCATTTTCTAGTT........................
EY901910       <-- ................................................
EY936942       <-- ................................................
EY927917       <-- AA..............................................
EX891105       <-- AAAATATATCATCATTTTCTAGTTAAGAAATCATTTTAGTTTTCAATC
EX767096       <-- AAAGTATATCATCATTTTC.............................
FD958776       <-- ................................................
EY903835       <-- ................................................
FD969319       <-- ................................................
EX894036       <-- ................................................
FD578245       --> ................................................
EX896845       --> ................................................
EX904815       --> ................................................
EX886803       --> ................................................
EX897093       --> ................................................
EY941346       --> ................................................
EX746494       --> ................................................
EX762929       --> ................................................
EY908062       --> ................................................
FD962181       --> ................................................
FD550209       --> ................................................
EX890545       --> ................................................
EY905185       --> ................................................
EY905484       --> ................................................
EY932121       --> ................................................
FD973669       --> ................................................
FD578934       --> ................................................
EX764465       --> ................................................
EY937455       --> ................................................
EY924472       --> AAAATATATCATCATTTTCTAGTT........................