RadishBase

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Alignment for radish unigene UN21691

               1      -     51
UN21691        --> GGAGGGTTATAAACTAATTAACAAAACATTGTTTAGTAACGTGGAAAAGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX891265       <-- ..................................................
EV571240       <-- ..................................................
EW730463       <-- ..................................................
EY911095       <-- ..................................................
EV541890       <-- ..................................................
EV572814       <-- ..................................................
FD554981       <-- ..................................................
EV529807       <-- ..................................................
FD553975       <-- ..................................................
EY894421       <-- ..................................................
EY917372       <-- ..................................................
EX887010       --> GGAGGGTTATAAACTAATTAACAAAACATTGTTTAGTAACGTGGAAAAGG
EV524938       --> ..................................................
EV566017       --> ..................................................
EV570173       --> ..................................................
EW726184       --> ..................................................
EY898336       --> ..................................................
EY915203       --> ..................................................
FD557979       --> ..................................................
FD559244       --> ..................................................
EV567993       --> ..................................................
EY921168       --> ..................................................
EV539127       --> ..................................................
EV537712       --> ..................................................

               51     -    101
UN21691        --> AAAGAGATAGGCCGACCAAATACGGGCGGTGGATCGGCCTTATCTGTTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX891265       <-- ..................................................
EV571240       <-- ..................................................
EW730463       <-- ..................................................
EY911095       <-- ..................................................
EV541890       <-- ..................................................
EV572814       <-- ..................................................
FD554981       <-- ..................................................
EV529807       <-- ..................................................
FD553975       <-- ..................................................
EY894421       <-- ..................................................
EY917372       <-- ..................................................
EX887010       --> AAAGAGATAGGCCGACCAAATACGGGCGGTGGATCGGCCTTATCTGTTTC
EV524938       --> ..................................................
EV566017       --> ..................................................
EV570173       --> ..................................................
EW726184       --> ..................................................
EY898336       --> ..................................................
EY915203       --> ..................................................
FD557979       --> ..................................................
FD559244       --> ..................................................
EV567993       --> ..................................................
EY921168       --> ..................................................
EV539127       --> ..................................................
EV537712       --> ..................................................

               101    -    151
UN21691        --> CTATAAAACAAGCCTAGTCGAGTCTTTGTTTCTAGCTTAGGGTTTGGTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX891265       <-- ....AAAACAAGC-TAGTCGAGTCTTTGTTTCTAGCTTAGGGTTTGGTTT
EV571240       <-- ...............................ggAGCTTAGGGTTTGGTTC
EW730463       <-- ...............................ggAGCTTAGGGTTTGGTTT
EY911095       <-- ...............................ggAGCTTAGGGTTTGGTTT
EV541890       <-- ....................................ggAGGGTTTGGTTT
EV572814       <-- ........................................GGTTTGGTTT
FD554981       <-- ..................................................
EV529807       <-- ..................................................
FD553975       <-- ..................................................
EY894421       <-- ..................................................
EY917372       <-- ..................................................
EX887010       --> CTATAAAACAAGCCTAGTCGAGTCTTTGTTTCTAGCTTAGGGTTTGGTTT
EV524938       --> ...............................ggAGCTTAGGGTTTGGTTT
EV566017       --> ...............................ggAGCTTAGGGTTTGGTTC
EV570173       --> ................................gAGCTTAGGGTTTGGTTT
EW726184       --> ...............................ggAGCTTAGGGTTTGGTTT
EY898336       --> ...............................ggAGCTTAGGGTTTGGTTT
EY915203       --> ...............................ggAGCTTAGGGTTTGGTTT
FD557979       --> ...............................ggAGCTTAGGGTTTGGTTT
FD559244       --> ................................gAGCTTAGGGTTTGGTTT
EV567993       --> ................................gggccTAGGGTTTGGTTT
EY921168       --> .......................................GGGCTTGGTTT
EV539127       --> ................................................TT
EV537712       --> ..................................................

               151    -    201
UN21691        --> CAGAGGAAGGAAAGAACGA-CGAACGAAGATCAAATC-AAGAGGGTTGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX891265       <-- CAGAGGAAGGAAAGAACGAACGAACGCAAATCAAATCGAAGAGGGTTGGA  Raphanus sativus var. oleiformis
EV571240       <-- CAGAGGAAGGAAAGAACGA-CGAACGAAGATCAAATC-AAGAGGGTTGGA  Raphanus raphanistrum subsp. landra
EW730463       <-- CAGAGGAAGGAAAGAACGA-CGAACGAAGATCAAATC-AAGAGGGTTGGA  Raphanus sativus cv Early Scarlet Globe
EY911095       <-- CAGAGGAAGGAAAGAACGA-CGAACGAAGATCAAATC-AAGAGGGTTGGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV541890       <-- CAGAGGAAGGAAAGAACGA-CGAACGAAGATCAAATC-AAGAGGGTTGGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV572814       <-- CAGAGGAAGGAAAGAAC----GAACGCAAATCAAATCGAAGAGGGTTGGA  Raphanus raphanistrum subsp. landra
FD554981       <-- ..............aagaA-CGAACGAAGATCAAATC-AAGAGGGTTGGA  Raphanus raphanistrum subsp. landra
EV529807       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD553975       <-- ..................................................  Raphanus raphanistrum subsp. landra
EY894421       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EY917372       <-- ..................................................  Raphanus raphanistrum subsp. landra
EX887010       --> CAGAGGAAGGAAAGAACGAACGAACGCAAATCAAATCGAAGAGGGTTGGA  Raphanus sativus var. oleiformis
EV524938       --> CAGAGGAAGGAAAGAACGA-CGAACGAAGATCAAATC-AAGAGGGTTGGA  Raphanus raphanistrum subsp. maritimus
EV566017       --> CAGAGGAAGGAAAGAACGA-CGAACGAAGATCAAATC-AAGAGGGTTGGA  Raphanus raphanistrum subsp. landra
EV570173       --> CAGAGGAAGGAAAGAACGA-CGAACGAAGATCAAATC-AAGAGGGTTGGA  Raphanus raphanistrum subsp. landra
EW726184       --> CAGAGGAAGGAAAGAACGA-CGAACGAAGATCAAATC-AAGAGGGTTGGA  Raphanus sativus cv Early Scarlet Globe
EY898336       --> CAGAGGAAGGAAAGAACGA-CGAACGAAGATCAAATC-AAGAGGGTTGGA  Raphanus raphanistrum subsp. maritimus
EY915203       --> CAGAGGAAGGAAAGAACGA-CGAACGAAGATCAAATC-AAGAGGGTTGGA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD557979       --> CAGAGGAAGGAAAGAACGA-CGAACGAAGATCAAATC-AAGAGGGTTGGA  Raphanus raphanistrum subsp. landra
FD559244       --> CAGAGGAAGGAAAGAACGA----ACGAAGATCAAATC-AAGAGGGTTGGA  Raphanus raphanistrum subsp. landra
EV567993       --> CAGAGGAAGGAAAGAACGA----ACGCAAATCAAATCGAAGAGGGTTGGA  Raphanus raphanistrum subsp. landra
EY921168       --> CAGAGGAAGGAAAGAACGA-CGAACGAAGATCAAATC-AAGAGGGTTGGA  Raphanus raphanistrum subsp. landra
EV539127       --> CAGAGGAAGGAAAGAACGA-CGAACGAAGATCAAATC-AAGAGGGTTGGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV537712       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)

               201    -    251
UN21691        --> TGGATCGTGACAGTAATGATGGACGTATTCCCTTAAGCAGCCTTTCCTGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX891265       <-- TGGATCGTGACAGCAATGATGGACGTATTCCCTTAAGCAGCCTTTCCTGC
EV571240       <-- TGGATCGTGACAGTAATGATGGACGTATTCCCTTAAGCAGCCTTTCCTGC
EW730463       <-- TGGATCGTGACAGTAATGATGGACGTATTCCCTTAAGCAGCCTTTCCTGC
EY911095       <-- TGGATCGTGACAGTAATGATGGACGTATTCCCTTAAGCAGCCTTTCCTGC
EV541890       <-- TGGATCGTGACAGTAATGATGGACGTATTCCCTTAAGCAGCCTTTCCTGC
EV572814       <-- TGGATCGTGACAGCAATGATGGACGTATTCCCTTAAGCAGCCTTTCCTGC
FD554981       <-- TGGATCGTGACAGTAATGATGGACGTATTCCCTTAAGCAGCCTTTCCTGC
EV529807       <-- ..................................................
FD553975       <-- ..................................................
EY894421       <-- ..................................................
EY917372       <-- ..................................................
EX887010       --> TGGATCGTGACAGCAATGATGGACGTATTCCCTTAAGCAGCCTTTCCTGC
EV524938       --> TGGATCGTGACAGTAATGATGGACGTATTCCCTTAAGCAGCCTTTCCTGC
EV566017       --> TGGATCGTGACAGTAATGATGGACGTATTCCCTTAAGCAGCCTTTCCTGC
EV570173       --> TGGATCGTGACAGTAATGATGGACGTATTCCCTTAAGCAGCCTTTCCTGC
EW726184       --> TGGATCGTGACAGTAATGATGGACGTATTCCCTTAAGCAGCCTTTCCTGC
EY898336       --> TGGATCGTGACAGTAATGATGGACGTATTCCCTTAAGCAGCCTTTCCTGC
EY915203       --> TGGATCGTGACAGTAATGATGGACGTATTCCCTTAAGCAGCCTTTCCTGC
FD557979       --> TGGATCGTGACAGTAATGATGGACGTATTCCCTTAAGCAGCCTTTCCTGC
FD559244       --> TGGATCGTGACAGTAATGATGGACGTATTCCCTTAAGCAGCCTTTCCTGC
EV567993       --> TGGATCGTGACAGCAATGATGGACGTATTCCCTTAAGCAGCCTTTCCTGC
EY921168       --> TGGATCGTGACAGTAATGATGGACGTATTCCCTTAAGCAGCCTTTCCTGC
EV539127       --> TGGATCGTGACAGTAA--ATGGACGTATTCCCTTAAGCAGCCTTTCCTGC
EV537712       --> ............GTAATGATGGACGTATTCCCTTAAGCAGCCTTTCCTGC

               251    -    301
UN21691        --> TACAAAGAAATGTGTATCCTTGCTGATAAGGATTGTCACTTTTCCACAGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX891265       <-- TACAAAGAAATGTGTAGGCTTGCTGATAAGGATTGTCACTTTTCCACAAT
EV571240       <-- TACAAAGAAATGTGTATCCTTGCTGATAAGGATTGTCACTTTTCCACAGT
EW730463       <-- TACAAAGAAATGTGTATCCTTGCTGATAAGGATTGTCACTTTTCCACAGT
EY911095       <-- TACAAAGAAATGTGTATCCTTGCTGATAAGGATTGTCACTTTTCCACAGT
EV541890       <-- TACAAAGAAATGTGTATCCTTGCTGATAAGGATTGTCACTTTTCCACAGT
EV572814       <-- TACAAAGAAATGTGTAGGCTTGCTGATAAGGATTGTCACTTTTCCACAAT
FD554981       <-- TACAAAGAAATGTGTATCCTTGCTGATAAGGATTGTCACTTTTCCACAGT
EV529807       <-- .ACAAAGAAATGTGTATCCTTGCTGATAAGGATTGTCACTTTTCCACAGT
FD553975       <-- ..................................................
EY894421       <-- ..................................................
EY917372       <-- ..................................................
EX887010       --> TACAAAGAAATGTGTAGGCTTGCTGATAAGGATTGTCACTTTTCCACAAT
EV524938       --> TACAAAGAAATGTGTATCCTTGCTGATAAGGATTGTCACTTTTCCACAGT
EV566017       --> TACAAAGAAATGTGTATCCTTGCTGATAAGGATTGTCACTTTTCCACAGT
EV570173       --> TACAAAGAAATGTGTATCCTTGCTGATAAGGATTGTCACTTTTCCACAGT
EW726184       --> TACAAAGAAATGTGTATCCTTGCTGATAAGGATTGTCACTTTTCCACAGT
EY898336       --> TACAAAGAAATGTGTATCCTTGCTGATAAGGATTGTCACTTTTCCACAGT
EY915203       --> TACAAAGAAATGTGTATCCTTGCTGATAAGGATTGTCACTTTTCCACAGT
FD557979       --> TACAAAGAAATGTGTATCCTTGCTGATAAGGATTGTCACTTTTCCACAGT
FD559244       --> TACAAAGAAATGTGTATCCTTGCTGATAAGGATTGTCACTTTTCCACAGT
EV567993       --> TACAAAGAAATGTGTAGGCTTGCTGATAAGGATTGTCACTTTTCCACAAT
EY921168       --> TACAAAGAAATGTGTATCCTTGCTGATAAGGATTGTCACTTTTCCACAGT
EV539127       --> TACAAAGAAATGTGTATCCTTGCTGATAAGGATTGTCACTTTTCCACAGT
EV537712       --> TACAAAGAAATGTGTATCCTTGCTGATAAGGATTGTCACTTTTCCACAGT

               301    -    351
UN21691        --> TCGACGTCCTCCCCTTTTGTTCGGAGACGTGTACGAGATGGTGAATGATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX891265       <-- TCGACGCCCTCCCCTTTTGTTCAGAGACGTGTACGAGATGGTGAATGATC  Raphanus sativus var. oleiformis
EV571240       <-- TCGACGTCCTCCCCTTTTGTTCGGAGACTTGTACGAGATGGTGAATGATC  Raphanus raphanistrum subsp. landra
EW730463       <-- TGGACGTCCTCCCCTTTTGTTCGGAGACGTGTACGAGATGGTGAATGATC  Raphanus sativus cv Early Scarlet Globe
EY911095       <-- TGGACGTCCTCCCCTTTTGTTCGGAGACGTGTACGAGATGGTGAATGATC  Raphanus raphanistrum subsp. raphanistrum (NY)
EV541890       <-- TGGACGTCCTCCCCTTTTGTTCGGAGACGTGTACGAGATGGTGAATGATC  Raphanus raphanistrum subsp. raphanistrum (MS)
EV572814       <-- TCGACGCCCTCCCCTTTTGTTCAGAGACGTGTACGAGATGGTGAATGATC  Raphanus raphanistrum subsp. landra
FD554981       <-- TCGACGTCCTCCCCTTTTGTTCGGAGACGTGTACGAGATGGTGAATGATC  Raphanus raphanistrum subsp. landra
EV529807       <-- TCGACGTCCTCCCCTTTTGTTCGGAGACGTGTACGAGATGGTGAATGATC  Raphanus raphanistrum subsp. maritimus
FD553975       <-- ..................................................  Raphanus raphanistrum subsp. landra
EY894421       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EY917372       <-- ..................................................  Raphanus raphanistrum subsp. landra
EX887010       --> TCGACGCCCTCCCCTTTTGTTCAGAGACGTGTACGAGATGGTGAATGATC  Raphanus sativus var. oleiformis
EV524938       --> TCGACGTCCTCCCCTTTTGTTCGGAGACGTGTACGAGATGGTGAATGATC  Raphanus raphanistrum subsp. maritimus
EV566017       --> TCGACGTCCTCCCCTTTTGTTCGGAGACTTGTACGAGATGGTGAATGATC  Raphanus raphanistrum subsp. landra
EV570173       --> TCGACGTCCTCCCCTTTTGTTCGGAGACGTGTACGAGATGGTGAATGATC  Raphanus raphanistrum subsp. landra
EW726184       --> TGGACGTCCTCCCCTTTTGTTCGGAGACGTGTACGAGATGGTGAATGATC  Raphanus sativus cv Early Scarlet Globe
EY898336       --> TCGACGTCCTCCCCTTTTGTTCGGAGACGTGTACGAGATGGTGAATGATC  Raphanus raphanistrum subsp. maritimus
EY915203       --> TGGACGTCCTCCCCTTTTGTTCGGAGACGTGTACGAGATGGTGAATGATC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD557979       --> TCGACGTCCTCCCCTTTTGTTCGGAGACGTGTACGAGATGGTGAATGATC  Raphanus raphanistrum subsp. landra
FD559244       --> TCGACGTCCTCCCCTTTTGTTCGGAGACGTGTACGAGATGGTGAATGATC  Raphanus raphanistrum subsp. landra
EV567993       --> TCGACGCCCTCCCCTTTTGTTCAGAGACGTGTACGAGATGGTGAATGATC  Raphanus raphanistrum subsp. landra
EY921168       --> TCGACGTCCTCCCCTTTTGTTCGGAGACGTGTACGAGATGGTGAATGATC  Raphanus raphanistrum subsp. landra
EV539127       --> TGGACGTCCTCCCCTTTTGTTCGGAGACGTGTACGAGATGGTGAATGATC  Raphanus raphanistrum subsp. raphanistrum (MS)
EV537712       --> TGGACGTCCTCCCCTTTTGTTCGGAGACGTGTACGAGATGGTGAATGATC  Raphanus raphanistrum subsp. raphanistrum (MS)

               351    -    401
UN21691        --> CTTCAACTGATTCAGTTGTCTCCTGGGGTGATAGCGGCAAGAGCTTCATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX891265       <-- CTTCAACTGATTCAGTTGTCTCCTGGGGTGATAGCGGCAAGAGCTTCATC
EV571240       <-- CTTCAACCGATTCAGTTGTCTCCTGGGGTGATAGCGGCAAGAGCTTCATC
EW730463       <-- CTTCAACTGATTCAGTTGTCTCCTGGGGTGATAGCGGCAAGAGCTTCATC
EY911095       <-- CTTCAACTGATTCAGTTGTCTCCTGGGGTGATAGCGGCAAGAGCTTCATC
EV541890       <-- CTTCAACTGATTCAGTTGTCTCCTGGGGTGATATCGGCAAGAGCTTCATC
EV572814       <-- CTTCAACTGATTCAGTTGTCTCCTGGGGTGATAGCGGCAAGAGCTTCATC
FD554981       <-- CTTCAACTGATTCAGTTGTCTCCTGGGGTGATAGCAGCAAGAGCTTCATC
EV529807       <-- CTTCAACTGATTCAGTTGTCTCCTGGGGTGATAGCGGCAAGAGCTTCATC
FD553975       <-- ..................................................
EY894421       <-- ..................................................
EY917372       <-- ..................................................
EX887010       --> CTTCAACTGATTCAGTTGTCTCCTGGGGTGATAGCGGCAAGAGCTTCATC
EV524938       --> CTTCAACTGATTCAGTTGTCTCCTGGGGTGATAGCGGCAAGAGCTTCATC
EV566017       --> CTTCAACCGATTCAGTTGTCTCCTGGGGTGATAGCGGCAAGAGCTTCATC
EV570173       --> CTTCAACTGATTCAGTTGTCTCCTGGGGTGATAGCGGCAAGAGCTTCATC
EW726184       --> CTTCAACTGATTCAGTTGTCTCCTGGGGTGATAGCGGCAAGAGCTTCATC
EY898336       --> CTTCAACTGATTCAGTTGTCTCCTGGGGTGATAGCGGCAAGAGCTTCATC
EY915203       --> CTTCAACTGATTCAGTTGTCTCCTGGGGTGATAGCGGCAAGAGCTTCATC
FD557979       --> CTTCAACTGATTCAGTTGTCTCCTGGGGTGATAGCGGCAAGAGCTTCATC
FD559244       --> CTTCAACTGATTCAGTTGTCTCCTGGGGTGATAGCAGCAAGAGCTTCATC
EV567993       --> CTTCAACTGATTCAGTTGTCTCCTGGGGTGATAGCGGCAAGAGCTTCATC
EY921168       --> CTTCAACTGATTCAGTTGTCTCCTGGGGTGATAGCGGCAAGAGCTTCATC
EV539127       --> CTTCAACTGATTCAGTTGTCTCCTGGGGTGATAGCGGCAAGAGCTTCATC
EV537712       --> CTTCAACTGATTCAGTTGTCTCCTGGGGTGATATCGGCAAGAGCTTCATC

               401    -    451
UN21691        --> GTCTGGAATGAATCTGAGTTCCTCGGAGATGTTCTTCCTAGGTGCTTATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX891265       <-- GTCTGGAAGGAATCTGAGTTCCTCGGAGATGTTCTTCCTAGGTGCTTATC
EV571240       <-- GTCTGGAATGAATCTGGGTTCCTCGGAGATGTTCTTCCTAGGTGCTTATC
EW730463       <-- GTCTGGAATGAATCTGAGTTCCTCGGAGATGTTCTTCCTAGGTGCTTATC
EY911095       <-- GTCTGGAATGAATCTGAGTTCCTCGGAGATGTTCTTCCTAGGTGCTTATC
EV541890       <-- GTCTGGAATGAATCTGAGTTCCTCGGAGATGTT-TTCCTAGGTGCTTATC
EV572814       <-- GTCTGGAAGGAATCTGAATTCCTCGGAGATGTTCTTCCTAGGTGCTTATC
FD554981       <-- GTCTGGAATGAATCTGAGTTCCTCGGAGATGTTCTTCCTAGGTGCTTATC
EV529807       <-- GTCTGGAATGAATCTGAGTTCCTCGGAGATGTTCTTCCTAGGTGCTTATC
FD553975       <-- ......AATGAATCTGAGTTCCTCGGAGATGTTCTTCCTAGGTGCTTATC
EY894421       <-- ...........ATCTGAGTTCCTCGGAGATGTTCTTCCTAGGTGCTTATC
EY917372       <-- ..................................................
EX887010       --> GTCTGGAAGGAATCTGAGTTCCTCGGAGATGTTCTTCCTAGGTGCTTATC
EV524938       --> GTCTGGAATGAATCTGAGTTCCTCGGAGATGTTCTTCCTAGGTGCTTATC
EV566017       --> GTCTGGAATGAATCTGGGTTCCTCGGAGATGTTCTTCCTAGGTGCTTATC
EV570173       --> GTCTGGAATGAATCTGAGTTCCTCGGAGATGTTCTTCCTAGGTGCTTATC
EW726184       --> GTCTGGAATGAATCTGAGTTCCTCGGAGATGTTCTTCCTAGGTGCTTATC
EY898336       --> GTCTGGAATGAATCTGAGTTCCTCGGAGATGTTCTTCCTAGGTGCTTATC
EY915203       --> GTCTGGAATGAATCTGAGTTCCTCGGAGATGTTCTTCCTAGGTGCTTATC
FD557979       --> GTCTGGAATGAATCTGAGTTCCTCGGAGATGTTCTTCCTAGGTGCTTATC
FD559244       --> GTCTGGAATGAATCTGAGTTCCTCGGAGATGTTCTTCCTAGGTGCTTATC
EV567993       --> GTCTGGAAGGAATCTGAATTCCTCGGAGATGTTCTTCCTAGGTGCTTATC
EY921168       --> GTCTGGAATGAATCTGAGTTCCTCGGAGATGTTCTTCCTAGGTGCTTATC
EV539127       --> GTCTGGAATGAATCTGAGTTCCTCGGAGATGTTCTTCCTAGGTGCTTATC
EV537712       --> GTCTGGAATGAATCTGAGTTCCTCGGAGATGTT-TTCCTAGGTGCTTATC

               451    -    501
UN21691        --> CTACGATTACAAAGATATGACATCTTTCACCACCAAGTTTCATGCCCTCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX891265       <-- CTATGATTACAAAGATATGACATCTTTCACCACCAAGTTTCATGCCCTCG
EV571240       <-- CTACGATTACAAAGATATGACATCTTTCACCACCAAGTTTCATGCCCTCG
EW730463       <-- CTACGATTACAAAGATATGACATCTTTCACCACCAAGTTTCATGCCCTCG
EY911095       <-- CTACGATTACAAAGATATGACATCTTTCACCACCAAGTTTCATGCCCTCG
EV541890       <-- CTACGATTACAAAGATATGACATCTTTCACCACCAAGTTTCATGCCCTCG
EV572814       <-- CTATGATTACAAAGATATGACATCTTTCACCACCAAGTTTCATGCCCTCG
FD554981       <-- CTACGATTACAAAGATATGACATCTTTCACCACCAAGTTTCATGCCCTCG
EV529807       <-- CTACGATTACAAAGATATGACATCTTTCACCACCAAGTTTCATGCCCTCG
FD553975       <-- CTACGATTACAAAGATATGACATCTTTCACCACCAAGTTTCATGCCCTCG
EY894421       <-- CTACGATTACAAAGATATGACATCTTTCACCACCAAGTTTCATGCCCTCG
EY917372       <-- ..................................................
EX887010       --> CTATGATTACAAAGATATGACATCTTTCACCACCAAGTTTCATGCCCTCG
EV524938       --> CTACGATTACAAAGATATGACATCTTTCACCACCAAGTTTCATGCCCTCG
EV566017       --> CTACGATTACAAAGATATGACATCTTTCACCACCAAGTTTCATGCCCTCG
EV570173       --> CTACGATTACAAAGATATGACATCTTTCACCACCAAGTTTCATGCCCTCG
EW726184       --> CTACGATTACAAAGATATGACATCTTTCACCACCAAGTTTCATGCCCTCG
EY898336       --> CTACGATTACAAAGATATGACATCTTTCACCACCAAGTTTCATGCCCTCG
EY915203       --> CTACGATTACAAAGATATGACATCTTTCACCACCAAGTTTCATGCCCTCG
FD557979       --> CTACGATTACAAAGATATGACATCTTTCACCACCAAGTTTCATGCCCTCG
FD559244       --> CTACGATTACAAAGATATGACATCTTTCACCACCAAGTTTCATGCCCTCG
EV567993       --> CTATGATTACAAAGATATGACATCTTTCACCACCAAGTTTCATGCCCTCG
EY921168       --> CTACGATTACAAAGATATGACATCTTTCACCACCAAGTTTCATGCCCTCG
EV539127       --> CTACGATTACAAAGATATGACATCTTTCACCACCAAGTTTCATGCCCTCG
EV537712       --> CTACGATTACAAAGATATGACATCTTTCACCACCAAGTTTCATGCCCTCG

               501    -    551
UN21691        --> GCTATAATAAAGTTGAAGAATCTGTGCATTGGGAATACACAGCCAATTAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX891265       <-- GCTATAATAAAGTTGAAGAATCTGTGCATTGGGAATACACAGCCAATTAT
EV571240       <-- GCTATAATAAAGTTGAAGAATCTGTGCATTGGGAATACACAGCCAATTAT
EW730463       <-- GCTATAATAAAGTTGAAGAATCTGTGCATTGGGAATACACAGCCAATTAT
EY911095       <-- GCTATAATAAAGTTGAAGAATCTGTGCATTGGGAATACACAGCCGATTAT
EV541890       <-- GCTATAATAAAGTTGAAGAATCTGTGCATTGGGAATACACAGCCAATTAT
EV572814       <-- GCTATAATAAAGTTGAAGAATCTGTGCATTGGGAATACACAGCCAATTAT
FD554981       <-- GCTATAATAAAGTTGAAGAATCTGTGCATTGGGAATACACAGCCAATTAT
EV529807       <-- GCTATAATAAAGTTGAAGAATCTGTGCATTGGGAATACACAGCCAATTAT
FD553975       <-- GCTATAATAAAGTTGAAGAATCTGTGCATTGGGAATACACAGCCAATTAT
EY894421       <-- GCTATAATAAAGTTGAAGAATCTGTGCATTGGGAATACACAGCCAATTAT
EY917372       <-- GCTATAATAAAGTTGAAGAATCTGTGCATTGGGAATACACAGCCAATTAT
EX887010       --> GCTATAATAAAGTTGAAGAATCTGTGCATTGGGAATACACAGCCAATTAT
EV524938       --> GCTATAATAAAGTTGAAGAATCTGTGCATTGGGAATACACAGCCAATTAT
EV566017       --> GCTATAATAAAGTTGAAGAATCTGTGCATTGGGAATACACAGCCAATTAT
EV570173       --> GCTATAATAAAGTTGAAGAATCTGTGCATTGGGAATACACAGCCAATTAT
EW726184       --> GCTATAATAAAGTTGAAGAATCTGTGCATTGGGAATACACAGCCAATTAT
EY898336       --> GCTATAATAAAGTTGAAGAATCTGTGCATTGGGAATACACAGCCAATTAT
EY915203       --> GCTATAATAAAGTTGAAGAATCTGTGCATTGGGAATACACAGCCGATTAT
FD557979       --> GCTATAATAAAGTTGAAGAATCTGTGCATTGGGAATACACAGCCAATTAT
FD559244       --> GCTATAATAAAGTTGAAGAATCTGTGCATTGGGAATACACAGCCAATTAT
EV567993       --> GCTATAATAAAGTTGAAGAATCTGTGCATTGGGAATACACAGCCAATTAT
EY921168       --> GCTATAATAAAGTTGAAGAATCTGTGCATTGGGAATACACAGCCAATTAT
EV539127       --> GCTATAATAAAGTTGAAGAATCTGTGCATTGGGAATACACAGCCAATTAT
EV537712       --> GCTATAATAAAGTTGAAGAATCTGTGCATTGGGAATACACAGCCAATTAT

               551    -    601
UN21691        --> TTGGTAAGAGGACAGCCTCCCCCCCC-TAAGGATCCATCCCCATGTACTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX891265       <-- TTGGTGAGAGGACAGCCTCCCTCCCC-TAAGGATCCATCCCCATGTACTT
EV571240       <-- TTGGTAAGAGGACAGCCTCCCCCCCC-TAAGGATCCATCCCCATGTACTT
EW730463       <-- TTGGTAAGAGGACAGCCTCCCCCCCC-TAAGGATCCATCCCCATGTACTT
EY911095       <-- TTGGTAAGAGGACAGCCTCCCCCCCC-TAAGGATCCATCCCCATGTACTC
EV541890       <-- TTGGTAAGAGGACAGCCTCCCCCCCC-TAAGGATCCATCCCCATGTACTT
EV572814       <-- TTGGTGAGAGGACAGCCTCCCTCCCC-TAAGGATCCATCCCCATGTACTT
FD554981       <-- TTGGTAAGAGGACAGCCTCCCCCCCC-TAAGGATCCATCCCCATGTACTT
EV529807       <-- TTGGTAAGAGGACAGCCTCCCCCCCC-TAAGGATCCATCCCCATGTACTT
FD553975       <-- TTGGTAAGAGGACAGCCTCCCCCCCC-TAAGGATCCATCCCCATGTACTT
EY894421       <-- TTGGTAAGAGGACAGCCTCCCCCCCC-TAAGGATCCATCCCCATGTACTT
EY917372       <-- TTGGTAAGGGGACAGCCTCCCCCCCC-TAAGGATCCATCCCCATGTACTT
EX887010       --> TTGGTGAGAGGACAGCCTCCCTCCCC-TAAGGATCCATCCCCATGTACTT
EV524938       --> TTGGTAAGAGGACAGCCTCCCCCCCC-TAAGGATCCATCCCCATGTACTT
EV566017       --> TTGGTAAGAGGACAGCCTCCCCCCCC-TAAGGATCCATCCCCATGTACTT
EV570173       --> TTGGTAAGAGGACAGCCTCCCCCCCCCTAAGGATCCATCCCCATGTACTT
EW726184       --> TTGGTAAGAGGACAGCCTCCCCCCCC-TAAGGATCCATCCCCATGTACTT
EY898336       --> TTGGTAAGAGGACAGCCTCCCCCCCC-TAAGGATCCATCCCCATGTACTT
EY915203       --> TTGGTAAGAGGACAGCCTCCCCCCCC-TAAGGATCCATCCCCATGTACTC
FD557979       --> TTGGTAAGAGGACAGCCTCCCCCCCC-TAAGGATCCATCCCCATGTACTT
FD559244       --> TTGGTAAGAGGACAGCCTCCCCCCCC-TAAGGATCCATCCCCATGTACTT
EV567993       --> TTGGTGAGAGGACAGCCTCCCTCCCC-TAAGGATCCATCCCCATGTACTT
EY921168       --> TTGGTAAGGGGACAGCCTCCCCCCCC-TAAGGATCCATCCCCATGTACTT
EV539127       --> TTGGTAAGAGGACAGCCTCCCCCCCCCTAAGGATCCATCCCCATGTACTT
EV537712       --> TTGGTAAGAGGACAGCCTCCCCCCCC-TAAGGATCCATCCCCATGTACTT

               601    -    651
UN21691        --> CTGCTGATCTTTTGACGATGGTTACTCCAGAATATGCCAAAATGTACGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX891265       <-- CTGCTGATCTTTTGACGATGGTTACTCCAGAATATGCCAAAATCTACGAG
EV571240       <-- CTGCTGATCTTTTGACGATGGTTACTCCAGAATATGCCAAAATGTACGAG
EW730463       <-- CTGCTGATCTTTTGACGATGGTTACTCCAGAATATGCCAAAATGTACGAG
EY911095       <-- CTGCTGATCTTTTGACGATGGTTACTCCAGAATATGCCAAAATGTACGAG
EV541890       <-- CTGCTGATCTTTTGACGATGGTTACTCCAGAATATGCCAAAATGTACGAG
EV572814       <-- CTGCTGATCTTTTGACGATGGTTACTCCAGAATATGCCAAAATCTACGAG
FD554981       <-- CTGCTGATCTTTTGACGATGGTTACTCCAGAATATGCCAAAATGTACGAG
EV529807       <-- CTGCTGATCTTT-GACGATGGTTACTCCAGAATATGCCAAAATGTACGAG
FD553975       <-- CTGCTGATCTTTTGACGATGGTTACTCCAGAATATGCCAAAATGTACGAG
EY894421       <-- TTGCTGATCTTTTGACGATGGTTACTCCAGAATATGCCAAAATGTACGAG
EY917372       <-- CTGCTGATCTTTTGACGATGGTTACTCCAGAATATGCCAAAATGTACGAG
EX887010       --> CTGCTGATCTTTTGACGATGGTTACTCCAGAATATGCCAAAATCTACGAG
EV524938       --> CTGCTGATCTTT-GACGATGGTTACTCCAGAATATGCCAAAATGTACGAG
EV566017       --> CTGCTGATCTTTTGACGATGGTTACTCCAGAATATGCCAAAATGTACGAG
EV570173       --> CTGCTGATCTTTTGACGATGGTTACTCCAGAATATGCCAAAATGTACGAG
EW726184       --> CTGCTGATCTTTTGACGATGGTTACTCCAGAATATGCCAAAATGTACGAG
EY898336       --> CTGCTGATCTTTTGACGATGGTTACTCCAGAATATGCCAAAATGTACGAG
EY915203       --> CTGCTGATCTTTTGACGATGGTTACTCCAGAATATGCCAAAATGTACGAG
FD557979       --> CTGCTGATCTTTTGACGATGGTTACTCCAGAATATGCCAAAATGTACGAG
FD559244       --> CTGCTGATCTTTTGACGATGGTTACTCCAGAATATGCCAAAATGTACGAG
EV567993       --> CTGCTGATCTTTTGACGATGGTTACTCCAGAATATGCCAAAATCTACGAG
EY921168       --> CTGCTGATCTTTTGACGATGGTTACTCCAGAATATGCCAAAATGTACGAG
EV539127       --> CTGCTGATCTTTTGACGATGGTTACTCCAGAATATGCCAAAATGTACGAG
EV537712       --> CTGCTGATCTTTTGACGATGGTTACTCCAGAATATGCCAAAATGTACGAG

               651    -    701
UN21691        --> TGGTCCTTTGCTTACATTAAGGATCGCAAACAATAAGCTCTGTTGGTTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX891265       <-- TGGTCCTTTGCTTACATTAAGGATCGCAAACAATAAGCTCTGTTGGTTCT
EV571240       <-- TGGTCCTTTGCTTACATTAAGGATCGCAAACAATAAGCTCTGTTGGTTCT
EW730463       <-- TGGTCCTTTGCTTACATTAAGGATCGCAAACAATAAGCTCTGTTGGTTCT
EY911095       <-- TGGTCCTTTGCTTACATTAAGGATCGCAAACAATAAGCTCTGTTGGTTCT
EV541890       <-- TGGTCCTTAGCTTACATTAAGGATCGCAAACAATAAGCTCTGTTGGTTCT
EV572814       <-- TGGTCCTTTGCTTACATTAAGGATCGCAAACAATAAGCTCTGTTGGTTCT
FD554981       <-- TGGTCCTTTGCTTACATTAAGGATCGCAAACAATAAGCTCTGTTGGTTCT
EV529807       <-- TGGTCCTTTGCTTACATTAAGGATCGCAAACAATAAGCTCTGTTGGTTCT
FD553975       <-- TGGTCCTTTGCTTACATTAAGGATCGCAAACAATAAGCTCTGTTGGTTCT
EY894421       <-- TGGTCCTTTGCTTACATTAAGGATCGCAAACAATAAGCTCTGTTGGTTCT
EY917372       <-- TGGTCCTTTGCTTACAT-AAGGATCGCAAACAATAAGCTCTGTTGGTTCT
EX887010       --> TGGTCCTTTGCTTACAT.................................
EV524938       --> TGGTCCTTTGCTTACATTAAGGATCGCAAACAATAAGCTCTGTTGGTTCT
EV566017       --> TGGTCCTTTGCTTACATTAAGGATCGCAAACAATAAGCTCTGTTGGTTCT
EV570173       --> TGGTCCTTTGCTTACATTAAGGATCGCAAACAATAAGCTCTGTTGGTTCT
EW726184       --> TGGTCCTTTGCTTACATTAAGGATCGCAAACAATAAGCTCTGTTGGTTCT
EY898336       --> TGGTCCTTTGCTTACATTAAGGATCGCAAACAATAAGCTCTGTTGGTTCT
EY915203       --> TGGTCCTTTGCTTACATTAAAGATCGCAAACAATAAGCTCTGTTGGTTCT
FD557979       --> TGGTCCTTTGCTTACATTAAGGATCGCAAACAATAAGCTCTGTTGGTTCT
FD559244       --> TGGTCCTTTGCTTACATTAAGGATCGCAAACAATAAGCTCTGTTGGTTCT
EV567993       --> TGGTCCTTTGCTTACATTAAGGATCGCAAACAATAAGCTCTGTTGGTTCT
EY921168       --> TGGTCCTTTGCTTACAT-AAGGATCGCAAACAATAAGCTCTGTTGGTTCT
EV539127       --> TGGTCCTTAGCTTACATTAAGGATCGCAAACAATAAGCTCTGTTGGTTCT
EV537712       --> TGGTCCTTAGCTTACATTAAGGATCGCAAACAATAAGCTCTGTTGGTTCT

               701    -    751
UN21691        --> GTTCGATGGAGTTGCTTTGCTCTCGTTGTTTTCTTAATCGTATTTTATCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX891265       <-- GTTCGATGGAGTTGCTTTGCTCTCGTTGTTTTCTTAATCGTATTTTATCG
EV571240       <-- GTTCGATGGAGTTGCTTTGCTCTCGTTGTTTTCTTAATCGTATTTTATCG
EW730463       <-- GTTCGATGGAGTTGCTTTGCTCTCGTTGTTTTCTTAATCGTATTTTATCG
EY911095       <-- GTTCGATGGAGTTGCTTTGCTCTCGTTGTTTTCTTAATCGTATTTTATCG
EV541890       <-- GTTCGATGGAGTTGCTTTGCTCTCGTTGTTTTCTTAATCGTATTTTATCG
EV572814       <-- GTTCAATGGAGTTGCTTTGCTCTCGTTGTTTTCTTAATCGTATTTTATCG
FD554981       <-- GTTCGATGGAGTTGCTTTGCTCTCGTTGTTTTCTTAATCGTATTTTATCG
EV529807       <-- GTTCGATGGAGTTGCTTTGCTCTCGTTGTTTTCTTAATCGTATTTTATCG
FD553975       <-- GTTCGATGGAGTTGCTTTGCTCTCGTTGTTTTCTTAATCGTATTTTATCG
EY894421       <-- GTTCGATGGAGTTGCTTTGCTCTCGTTGTTTTTTTAATCGTATTTTATCG
EY917372       <-- GTTCGATGGAGTTGCTTTGCTCTCGTTGTTTTCTTAATCGTATTTTATCG
EX887010       --> ..................................................
EV524938       --> GTTCGATGGAGTTGCTTTGCTCTCGTTGTTTTCTTAATCGTATTTTATCG
EV566017       --> GTTCGATGGAGTTGCTTTGCTCTCGTTGTTTTCTTAATCGTATTTTATCG
EV570173       --> GTTCGATGGAGTTGCTTTGCTCTCGTTGTTTTCTTAATCGTATTTTATCG
EW726184       --> GTTCGATGGAGTTGCTTTGCTCTCGTTGTTTTCTTAATCGTATTTTATCG
EY898336       --> GTTCGATGGAGTTGCTTTGCTCTCGTTGTTTTCTTAATCGTATTTTATCG
EY915203       --> GTT...............................................
FD557979       --> GTTCGATGGAGTTGCTTTGCTCTCGTTGTTTTCTTAATCGTATTTTATCG
FD559244       --> GTTCGATGGAGTTGCTTTGCTCTCGTTGTTTTCTTAATCGTATTTTATCG
EV567993       --> GTTCAATGGAGTTGCTTTGCTCTCGTTGTTTTCTTAATCGTATTTTATCG
EY921168       --> GTTCGATGGAGTTGCTTTGCTCTCGTTGTTTTCTTAATCGTATTTTATCG
EV539127       --> GTTCGATGGAGTTGCTTTGCTCTCGTTGTTTTCTTAATCGTATTTTATCG
EV537712       --> GTTCGATGGAGTTGCTTTGCTCTCGTTGTTTTCTTAATCGTATTTTATCG

               751    -    801
UN21691        --> TCCTGTTTGAAAACATTGGG-TTTGGTCTCTCT-TCTCCTTTTCTTTTAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX891265       <-- TCCTGTTTGAAAACATTGGG-TTTGGTCTCTCT--CTCCTTTTCTTTTAA  Raphanus sativus var. oleiformis
EV571240       <-- TCCTGTTTGAAAACATTGGG-TTTGGTCTCTCT-TCTCCTTTTCTTTTAA  Raphanus raphanistrum subsp. landra
EW730463       <-- TCCTGTTTGAAAACATTGGG-TTTGGTCTCTCTCTCTCCTTTTCTTTTAA  Raphanus sativus cv Early Scarlet Globe
EY911095       <-- TCCTGTTTGGAAACATTGGG-TTTGGTCTCTCT-TCTCCTTTTCTTTTAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV541890       <-- TCCTGTTTGAAAACATTGGG-TTTGGTCTCTCT--CTCCTTTTCTTTTAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV572814       <-- TCCTGTTTGAAAACATTGGG-TTTGGTCTCTCT--CTCCTTTTCTTTTAA  Raphanus raphanistrum subsp. landra
FD554981       <-- TCCTGTTTGAAAACATTGGG-TTTGGTCTCTCT-TCTCCTTTTCTTTTAA  Raphanus raphanistrum subsp. landra
EV529807       <-- TCCTGTTTGAAAACATTGGG-TTTGGTCTTTCT-TCTCCTTTTCTTTTAA  Raphanus raphanistrum subsp. maritimus
FD553975       <-- TCCTGTTTGAAAACATTGGG-TTTGGTCTCTCT-TCTCCTTTTCTTTTAA  Raphanus raphanistrum subsp. landra
EY894421       <-- TCCTGTTTGAAAACATTGGG-TTTGGTCTCTTT-TCTCCTTTTCTTTTAA  Raphanus raphanistrum subsp. maritimus
EY917372       <-- TCCTGTTTGAAAACATTGGG-TTTGGTCTCTCT-TCTCCTTTTCTTTTAA  Raphanus raphanistrum subsp. landra
EX887010       --> ..................................................  Raphanus sativus var. oleiformis
EV524938       --> TCCTGTTTGAAAACATTGGG-TTTGGTCTCTCT-TCTCCTTTTCTTTTAA  Raphanus raphanistrum subsp. maritimus
EV566017       --> TCCTGTTTGAAAACATTGGG-TTTGGTCTCTCT-TCTCCTTTTCTTTTAA  Raphanus raphanistrum subsp. landra
EV570173       --> TCCTGTTTGAAAACATTGGGGTTTGGTCTCTCT-TCTCCTTTTCTTTTAA  Raphanus raphanistrum subsp. landra
EW726184       --> TCCTGTTTGAAA-CATTGGG-TTTGGTCTCTCTCTCTCCTTT........  Raphanus sativus cv Early Scarlet Globe
EY898336       --> TCCTGTTTGAAAACATTGGG-TTTGGTCTCT...................  Raphanus raphanistrum subsp. maritimus
EY915203       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD557979       --> TCCTGTTTGAAA-CATTGGG-TTTGGTCTCTCT-TCTCCTTTTCTTT-AA  Raphanus raphanistrum subsp. landra
FD559244       --> TCCTGTTTGAAAACATTGGG-TTTGGTCTCTCT-TCTCCTTTTCTTTTAA  Raphanus raphanistrum subsp. landra
EV567993       --> TCCTGTTTGAAAACATTGGG-TTTGGTCTCTCT--CTCCTTTTCTTTTAA  Raphanus raphanistrum subsp. landra
EY921168       --> TCCTGTTTGAAAACATTGGG-TTTGGTCTCTCT-TCTCCTTTTCTTTTAA  Raphanus raphanistrum subsp. landra
EV539127       --> TCCTGTTTGAAAACATTGGG-TTTGGTCTCTCT--CTCCTTTTCTTTTAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV537712       --> TCCTGTTTGAAAACATTGGG-TTTGGTCTCTCT--CTCCTTTTCTTTTAA  Raphanus raphanistrum subsp. raphanistrum (MS)

               801    -    851
UN21691        --> CTTATGGTTGTAAGATAAAA-GATGTTTGCATTTTAATAAAAGGTAGATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX891265       <-- CTTATGGTTGTAAGATAAAA-GATGTTTGCATTTTAATAAAAGGTAGATC  Raphanus sativus var. oleiformis
EV571240       <-- CTTATGGTTGTAAGATAAAAAGATGTTTGCATTTTAATAAAAGGTAGATC  Raphanus raphanistrum subsp. landra
EW730463       <-- CTTATGGTTGTAAGATAAAA-GATGTTTGCATTTTAATAAAAGGTAGATC  Raphanus sativus cv Early Scarlet Globe
EY911095       <-- CTTATGGTTGTAAGATAAAA-GATGTTTGCATTTTAATAAAAGGTAGATC  Raphanus raphanistrum subsp. raphanistrum (NY)
EV541890       <-- CTTATGGTTGTAAGATAAAA-GATGTTTGCATTTTAATAAAAGGTAGATC  Raphanus raphanistrum subsp. raphanistrum (MS)
EV572814       <-- CTTATGGTTGTAAGATAAAA-GATGTTTGCATTTTAATAAAAGGTAGATC  Raphanus raphanistrum subsp. landra
FD554981       <-- CTTATGGTTGTAAGATAAAAAGATGTTTGCATTTTAATAAAAGGTAGATC  Raphanus raphanistrum subsp. landra
EV529807       <-- CTTATGGTTGTAAGATAAAAAGATGTTTGCATTTTAATAAAAGGTAGATC  Raphanus raphanistrum subsp. maritimus
FD553975       <-- CTTATGGTTGTAAGATAAAAAGATGTTTGCATTTTAATAAAAGGTAGATC  Raphanus raphanistrum subsp. landra
EY894421       <-- CTTATGGTTGTAAGATAAAAAGATGTTTGCATTTTAATAAAAGGTAGATC  Raphanus raphanistrum subsp. maritimus
EY917372       <-- CTTATGGTTGTAAGATAAAAAGATGTTTGCATTTTAATAAAAGGTAGATC  Raphanus raphanistrum subsp. landra
EX887010       --> ..................................................  Raphanus sativus var. oleiformis
EV524938       --> CTTATGGTTGTAAGAT..................................  Raphanus raphanistrum subsp. maritimus
EV566017       --> CTTATGGTTGTAAGATAAAAAGATGTTTGCATTTTAATAAAAGGTAGATC  Raphanus raphanistrum subsp. landra
EV570173       --> CTTATGGTTGTATGAT..................................  Raphanus raphanistrum subsp. landra
EW726184       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EY898336       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EY915203       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD557979       --> CTTATGGTTGTAAGATAAAAa.............................  Raphanus raphanistrum subsp. landra
FD559244       --> CTTATGGTTGTAAGATAAAAAGATGTTTGCATTTTAATAAAAGGTAGATC  Raphanus raphanistrum subsp. landra
EV567993       --> CTTATGGTTGTAAGATAAAA-GATGTTTGCATTTTAATAAAAGGTAGATC  Raphanus raphanistrum subsp. landra
EY921168       --> CTTATGGTTGTAAGATAAAAa.............................  Raphanus raphanistrum subsp. landra
EV539127       --> CTTATGGTTGTAAGATAAAA-GATGTTTGCATTTTAATAAAAGGTAGATC  Raphanus raphanistrum subsp. raphanistrum (MS)
EV537712       --> CTTATGGTTGTAAGATAAAA-GATGTTTGCATTTTAATA...........  Raphanus raphanistrum subsp. raphanistrum (MS)

               851    -    901
UN21691        --> ATTATGATCTTTTGGTTCTGTTGACAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX891265       <-- ATTATGATCTTTTGGTTCTGTTGACg.
EV571240       <-- ATTATGATC..................
EW730463       <-- ATTATG.....................
EY911095       <-- ATTATGATC..................
EV541890       <-- ATTATGATCTTTTGGTTC.........
EV572814       <-- ATTATGAcc..................
FD554981       <-- ATTATGATCTTTTGGTTC.........
EV529807       <-- ATTATGATCTTTTGGTTCTGTTGACAC
FD553975       <-- ATTATGATCTTTTGGTcc.........
EY894421       <-- ATTATGATCTTTTGGTTttg.......
EY917372       <-- ATTATGATCTTTTGGTgc.........
EX887010       --> ...........................
EV524938       --> ...........................
EV566017       --> ATTATGATC..................
EV570173       --> ...........................
EW726184       --> ...........................
EY898336       --> ...........................
EY915203       --> ...........................
FD557979       --> ...........................
FD559244       --> ATTATGATCTTTTGGT...........
EV567993       --> ATTATGAcc..................
EY921168       --> ...........................
EV539127       --> ATTATGATCTTTTGGTTC.........
EV537712       --> ...........................