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Alignment for radish unigene UN21695

               1      -     51
UN21695        --> GGACGGAGATGTGCTTGCTTTGTCATTTGCTCCCAAAGATGAACACGAGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV540390       <-- ..................................................
EX909306       <-- ..................................................
EY944673       <-- ..................................................
FD567836       <-- ..................................................
EY944440       <-- ..................................................
EX898759       <-- ..................................................
EY949093       --> GGACGGAGATGTGCTTGCTTTGTCATTTGCTCCCAAAGATGAACACGAGG
EX905619       --> ..................................................
EX894439       --> ..................................................
FD564321       --> ..................................................
EY948810       --> ..................................................
FY442785       --> ..................................................
EY950412       --> ..................................................
EY898654       --> ..................................................

               51     -    101
UN21695        --> CGCAGGTGCAGTTTGCTTTGGAACGTGGTATCCCTGCAATGTCAAACGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV540390       <-- ..................................................
EX909306       <-- ..................................................
EY944673       <-- ..................................................
FD567836       <-- ..................................................
EY944440       <-- ..................................................
EX898759       <-- ..................................................
EY949093       --> CGCAGGTGCAGTTTGCTTTGGAACGTGGTATCCCTGCAATGTCAAACGTT
EX905619       --> ..................................................
EX894439       --> ..................................................
FD564321       --> ..................................................
EY948810       --> ..................................................
FY442785       --> ..................................................
EY950412       --> ..................................................
EY898654       --> ..................................................

               101    -    151
UN21695        --> ATGGGAACCAAGAGATTGCCTTTCCCAGGATCTGTTTTCGACCTTATCCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV540390       <-- ..................................................
EX909306       <-- ..................................................
EY944673       <-- ..................................................
FD567836       <-- ..................................................
EY944440       <-- ..................................................
EX898759       <-- ..................................................
EY949093       --> ATGGGAACCAAGAGATTGCCTTTCCCAGGATCTGTTTTCGACCTTATCCA
EX905619       --> ..................................................
EX894439       --> ..................................................
FD564321       --> ..................................................
EY948810       --> ..................................................
FY442785       --> ..................................................
EY950412       --> ..................................................
EY898654       --> ..................................................

               151    -    201
UN21695        --> CTGTGCTCGTTGTAGAGTCCCTTGGCATATTGAAGGTGGTAAACTACTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV540390       <-- ..................................................
EX909306       <-- ..................................................
EY944673       <-- ..................................................
FD567836       <-- ..................................................
EY944440       <-- ..................................................
EX898759       <-- ..................................................
EY949093       --> CTGTGCTCGTTGTAGAGTCCCTTGGCATATTGAAGGTGGTAAACTACTTT
EX905619       --> ..................................................
EX894439       --> ..................................................
FD564321       --> ..................................................
EY948810       --> ..................................................
FY442785       --> ..................................................
EY950412       --> ..................................................
EY898654       --> ..................................................

               201    -    251
UN21695        --> TGGAATTGAACCGTGCATTGAGGCCCGGTGGTTTCTTTGTCTGGTCGGCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV540390       <-- ..................................................
EX909306       <-- ..................................................
EY944673       <-- ..................................................
FD567836       <-- ..................................................
EY944440       <-- ..................................................
EX898759       <-- ..................................................
EY949093       --> TGGAATTGAACCGTGCATTGAGGCCCGGTGGTTTCTTTGTCTGGTCGGCG
EX905619       --> ..................................................
EX894439       --> ..................................................
FD564321       --> ..................................................
EY948810       --> ..................................................
FY442785       --> ..................................................
EY950412       --> ..................................................
EY898654       --> ..................................................

               251    -    301
UN21695        --> ACTCCAGTTTACAGGAAGGACGAAGAAGACGTTAGCATATGGAAAGCAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV540390       <-- ..................................................
EX909306       <-- ..................................................
EY944673       <-- ..................................................
FD567836       <-- ..................................................
EY944440       <-- ..................................................
EX898759       <-- ..................................................
EY949093       --> ACTCCAGTTTACAGGAAGGACGAAGAAGACGTTAGCATATGGAAAGCAAT
EX905619       --> ................................gAGCATATGGAAAGCAAT
EX894439       --> ..................................................
FD564321       --> ..................................................
EY948810       --> ..................................................
FY442785       --> ..................................................
EY950412       --> ..................................................
EY898654       --> ..................................................

               301    -    351
UN21695        --> GTCAAAGCTCACAAAGGCAATGTGTTGGGAGCTAAAGACGATTA-GAAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV540390       <-- ..................................................
EX909306       <-- ..................................................
EY944673       <-- ..................................................
FD567836       <-- ..................................................
EY944440       <-- ..................................................
EX898759       <-- ..................................................
EY949093       --> GTCAAAGCTCACAAAGGCAATGTGCTGGGAGCTAAAGACGATTA-GAAAG
EX905619       --> GTCAAAGCTCACAAAGGCAATGTGTTGGGAGCTAAAGACGATTAAGAAAG
EX894439       --> ..................................................
FD564321       --> ..................................................
EY948810       --> ..................................................
FY442785       --> ..................................................
EY950412       --> ..................................................
EY898654       --> ..................................................

               351    -    401
UN21695        --> ATGAACTGAATGAAGTTAGTGCTGCCGTTTACCAAAATCCAATGTCGAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV540390       <-- ..................................................
EX909306       <-- ..................................................
EY944673       <-- ..................................................
FD567836       <-- ..................................................
EY944440       <-- ..................................................
EX898759       <-- ..................................................
EY949093       --> ATGAACTGAATGAAGTTAGTGCTGCCGTTTACCAAAAGCCAATGTCGAAT
EX905619       --> ATGAACTGAATGAAGTTAGTGCTGCCGTTTACCAAAATCCAATGTCGAAT
EX894439       --> ..................................................
FD564321       --> ..................................................
EY948810       --> ..................................................
FY442785       --> ..................................................
EY950412       --> ..................................................
EY898654       --> ..................................................

               401    -    451
UN21695        --> GAATGCTACAACCAAAGATCTCAGAACGAGCCACCTCTATGCAAAGACTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV540390       <-- ..................................................
EX909306       <-- ..................................................
EY944673       <-- ..................................................
FD567836       <-- ..................................................
EY944440       <-- ..................................................
EX898759       <-- ..................................................
EY949093       --> GAATGCTACAACCAAAGATCTCAGAACGAGCCACCTCTATGCAAAGACTC
EX905619       --> GAATGCTACAACCAAAGATCTCAGAACGAGCCACCTCTATGCAAAGACTC
EX894439       --> ..................................................
FD564321       --> ..................................................
EY948810       --> ..................................................
FY442785       --> ..................................................
EY950412       --> ..................................................
EY898654       --> ..................................................

               451    -    501
UN21695        --> TGATGATCAAAATGCCGCCTGGAATGTTCCACTTGAGGCATGTATGCACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV540390       <-- ..................................................
EX909306       <-- ..................................................
EY944673       <-- ..................................................
FD567836       <-- ..................................................
EY944440       <-- ..................................................
EX898759       <-- ..................................................
EY949093       --> TGATGATCAAAATGCCGCCTGGAATGTCCCACTTGAGGCATGTATGCACA
EX905619       --> TGATGATCAAAATGCCGCCTGGAATGTTCCACTTGAGGCATGTATGCACA
EX894439       --> ..................................................
FD564321       --> ..................................................
EY948810       --> ..................................................
FY442785       --> ..................................................
EY950412       --> ..................................................
EY898654       --> ..................................................

               501    -    551
UN21695        --> AAGTGGCGGAAGATTCATCAAAACGTGGAGCAGTTTGGCCTGAAAGATGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV540390       <-- ..............................................ATGG
EX909306       <-- ..................................................
EY944673       <-- ..................................................
FD567836       <-- ..................................................
EY944440       <-- ..................................................
EX898759       <-- ..................................................
EY949093       --> AAGTGGCGGAAGATTCATCAAAACGTGGAGCAGTTTGGCCTGAAAGATGG
EX905619       --> AAGTGGCGGAAGATTCATCAAAACGTGGAGCAGTTTGGCCTGAAAGATGG
EX894439       --> ..................................................
FD564321       --> ..................................................
EY948810       --> ..................................................
FY442785       --> ..................................................
EY950412       --> ..................................................
EY898654       --> ..................................................

               551    -    601
UN21695        --> CCAGAGAGAGTAGAGACTGCTCCTCAGTGGTTGGAATCTCAGGAAGGTGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV540390       <-- CCGGAGAGAGTAGAGACTGCTCCTCAGTGGTTGGAATCTCAGGAAGGTGT
EX909306       <-- ..................................................
EY944673       <-- ..................................................
FD567836       <-- ..................................................
EY944440       <-- ..................................................
EX898759       <-- ..................................................
EY949093       --> CCAGAGAGAGTAGAGACTGCTCCTCAGTGGTTGGAATCTCAGGAAGGTGT
EX905619       --> CCAGAGAGAGTAGAGACTGCTCCTCAGTGGTTGGAATCTCAGGAAGGTGT
EX894439       --> ..................................................
FD564321       --> ..................................................
EY948810       --> ..................................................
FY442785       --> ..................................................
EY950412       --> ..................................................
EY898654       --> ..................................................

               601    -    651
UN21695        --> ATATGGAAAACCTGCACCAGAGGATTTCACAGCTGACCATGAGCGTTGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV540390       <-- ATATGGAAAACCTGCACCAGAGGATTTCACAGCAGACCATGAACGTTGGA
EX909306       <-- .............GCACCAGAGGATTTCACAGCTGACCATGAGCGTTGGA
EY944673       <-- ...............ACCAGAGGATTTCACAGCTGACCATGAGCGTTGGA
FD567836       <-- ..................................................
EY944440       <-- ..................................................
EX898759       <-- ..................................................
EY949093       --> ATATGAAAAACCTGCACCAGAGGATTTCACAGCTGACCATGAGCGTTGGA
EX905619       --> ATATGGAAAACCTGCACCAAAGGATTTCACTGCTGACCATGAGCGTTGGA
EX894439       --> ........................TTTCACAGCAGACCATGAGCGTTGGA
FD564321       --> ..................................................
EY948810       --> ..................................................
FY442785       --> ..................................................
EY950412       --> ..................................................
EY898654       --> ..................................................

               651    -    701
UN21695        --> AGACTATTGTCTCAAAGTCATACCTCAACGGTATGGGAATCGATTGGTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV540390       <-- AGACTATTGTTTCAAAGTCATACCTCAACGGTATGGGAATCGATTGGTCT
EX909306       <-- AGACTATTGTCTCAAAGTCATACCTCAACGGTATGGGAATCGATTGGTCT
EY944673       <-- AGACTATTGTCTCAAAGTCATACCTCAACGGTATGGGAATCGATTGGTCT
FD567836       <-- .............................GGTATGGGAATCGATTGGTCT
EY944440       <-- ..................................................
EX898759       <-- ..................................................
EY949093       --> AGACTATTGTCTCAAAGTCATACCTCAACGGTATGGGAATCGATTGGTCT
EX905619       --> AGACTATTGTCTCAA...................................
EX894439       --> AGACTATTGTCTCAAAGTCATACCTCAACGGTATGGGAATCGATTGGTCT
FD564321       --> .............................GGTATGGGAATCGATTGGTCT
EY948810       --> ..................................................
FY442785       --> ..................................................
EY950412       --> ..................................................
EY898654       --> ..................................................

               701    -    751
UN21695        --> TATGTGAGAAACGTGATGGACATGAGAGCTGTCTATGGAGGTTTTGCTGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV540390       <-- TATGTGAGAAACGTGATGGACATGAGAGCTGTCTATGGAGGTTTTGCTGC
EX909306       <-- TATGTGAGAAACGTGATGGACATGAGAGCTGTCTATGGAGGTTTTGCTGC
EY944673       <-- TATGTGAGAAACGTGATGGACATGAGAGCTGTCTATGGAGGTTTTGCTGC
FD567836       <-- TATGTGAGAAACGTGATGGACATGAGAGCTGTCTATGGAGGTTTTGCTGC
EY944440       <-- ..................................................
EX898759       <-- ..................................................
EY949093       --> TATGTGAGAAACGTGATGGACATGAGAGCTGTCTA...............
EX905619       --> ..................................................
EX894439       --> TATGTGAGAAACGTGATGGACATGAGAGCTGTGTATGGAGGTTTTGCTGC
FD564321       --> TATGTGAGAAACGTGATGGACATGAGAGCTGTCTATGGAGGTTTTGCTGC
EY948810       --> ..................................................
FY442785       --> ..................................................
EY950412       --> ..................................................
EY898654       --> ..................................................

               751    -    801
UN21695        --> TGCATTGAAGGATCTGAAACTTTGGGTGATGAATGTAGTTCCCATTGACT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV540390       <-- TGCATTGAAGGATCTGAAACTTTGGGTGATGAATGTAGTTCCTATCGACT
EX909306       <-- TGCATTGAAGGATCTGAAACTTTGGGTGATGAATGTAGTTCCCATTGACT
EY944673       <-- TGCATTGAAGGATCTGAAACTTTGGGTGATGAATGTAGTTCCCATTGACT
FD567836       <-- TGCATTGAAGGATCTGAAACTTTGGGTGATGAATGTAGTTCCTATCGACT
EY944440       <-- .....................gTGGGTGATGAATGTAGTTCCCATTGACT
EX898759       <-- ..................................................
EY949093       --> ..................................................
EX905619       --> ..................................................
EX894439       --> TGCATTGAAGGATCTGAAACTCTGGGTGATGAATGTAGTTCCCATTGACT
FD564321       --> TGCATTGAAGGATCTGAAACTTTGGGTGATGAATGTAGTTCCTATCGACT
EY948810       --> .....................gTGGGTGATGAATGTAGTTCCCATTGACT
FY442785       --> ..................................................
EY950412       --> ..................................................
EY898654       --> ..................................................

               801    -    851
UN21695        --> CACCAGATACGCTTCCAATCATATATGAACGTGGTTTGTTTGGAATCTAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV540390       <-- CACCAGATACGCTTCCAATCATTTATGAACGTGGTTTGTTTGGAATCTAC
EX909306       <-- CACCAGATACGCTTCCAATCATATATGAACGTGGTTTGTTTGGAATCTAC
EY944673       <-- CACCAGATACGCTTCCAATCATATATGAACGTGGTTTGTTTGGAATCTAC
FD567836       <-- CACCTGATACGCTTCCACTCATATACGAACGTGGTTTGTTTGGAATCTAC
EY944440       <-- CACCAGATACGCTTCCAATCATATATGAACGTGGTTTGTTTGGAATCTAC
EX898759       <-- ..................................................
EY949093       --> ..................................................
EX905619       --> ..................................................
EX894439       --> CACCAGATACGCTTCCAATCATATATGAACGTGGTTTGTTTGGAATCTAC
FD564321       --> CACCTGATACGCTTCCACTCATATACGAACGTGGTTTGTTTGGAATCTAC
EY948810       --> CACCAGATACGCTTCCAATCATATATGAACGTGGTTTGTTTGGAATCTAC
FY442785       --> ..................................................
EY950412       --> ..................................................
EY898654       --> ..................................................

               851    -    901
UN21695        --> CATGACTGGTGTGAATCATTCAGCACTTACCCTCGAACTTACGACCTCCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV540390       <-- CATGACTGGTGTGAATCATTCAGCACTTACCCTCGAACTTACGACCTCCT
EX909306       <-- CATGACTGGTGTGAATCATTCAGCACTTACCCTCGAACTTACGACCTCCT
EY944673       <-- CATGACTGGTGTGAATCATTCAGCACTTACCCTCGAACTTACGACCTCCT
FD567836       <-- CATGACTGGTGTGAATCATTCAGCACTTACCCTCGAACTTACGACCTCCT
EY944440       <-- CATGACTGGTGTGAATCATTCAGCACTTACCCTCGAACTTACGACCTCCT
EX898759       <-- ..................................................
EY949093       --> ..................................................
EX905619       --> ..................................................
EX894439       --> CATGACTGGTGTGAATCATTCAGCACTTACCCTCGAACTTACGACCTCCT
FD564321       --> CATGACTGGTGTGAATCATTCAGCACTTACCCTCGAACTTACGACCTCCT
EY948810       --> CATGACTGGTGTGAATCATTCAGCACTTACCCTCGAACTTACGACCTCCT
FY442785       --> ..............................CCTCGAACT-ACGACCTCCT
EY950412       --> ..................................................
EY898654       --> ..................................................

               901    -    951
UN21695        --> TCATGCTGATCATCTTTTCTCTTCACTGAAGAAGAGGTGCAACTTGGTGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV540390       <-- TCATGCTGATCATCTTTTCTCTTCTCTGAAGAAGAGGTGCAACTTGGTGT
EX909306       <-- TCATGCTGATCATCTTTTCTCTTCACTGAAGAAGAGGTGCAACTTGGTGT
EY944673       <-- TCATGCTGATCATCTTTTCTCTTCACTGAAGAAGAGGTGCAACTTGGTGT
FD567836       <-- TCATGCTGATCATCTTTTCTCTTCACTGAAGAAGGGGTGCAACTTGGTGT
EY944440       <-- TCATGCTGATCATCTTTTCTCTTCACTGAAGAAGAGGTGCAACTTGGTGT
EX898759       <-- ......................TCACTGAAGAAGAGGTGCAACTTGGTGT
EY949093       --> ..................................................
EX905619       --> ..................................................
EX894439       --> TCATGCTGATCATCTTTTCTCTTCACTGAAGAAGAGGTGCAACTTGGTGT
FD564321       --> TCATGCTGATCATCTTTTCTCTTCACTGAAGAAGGGGTGCAACTTGGTGT
EY948810       --> TCATGCTGATCATCTTTTCTCTTCACTGAAGAAGAGGTGCAACTTGGTGT
FY442785       --> TCATGCTGATCATCTTTTCTCTTCACTGAAGAAGAGGTGCAACTTGGTGT
EY950412       --> ........................................gACTTGGTGT
EY898654       --> ..................................................

               951    -   1001
UN21695        --> CGGTAATGGCTGAAGTGGACAGGATTCTTAGACCACAAGGAACGTTTATA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV540390       <-- CGGTAATGGCTGAAGTGGACAGGATTCTTAGACCGCAAGGAACGTTTATA
EX909306       <-- CGGTAATGGCTGAAGTGGACAGGATTCTTAGACCACAAGGAACGTTTATA
EY944673       <-- CGGTAATGGCTGAATTGGACAGGATTCTTAGACCACAAGGAACGTTTATA
FD567836       <-- CGGTAATGGCTGAAGTGGACAGGATTCTTAGACCACAAGGAACGTTTATA
EY944440       <-- CGGTAATGGCTGAAGTGGACAGGATTCTTAGACCACAAGGAACGTTTATA
EX898759       <-- CGGTAATGGCTGAAGTGGACAGGATTCTTAGACCACAAGGAACGTTTATA
EY949093       --> ..................................................
EX905619       --> ..................................................
EX894439       --> CGGTAATGGCTGAAGTGGACAGGATTCTTAGACCACAAGGAACGTTTATA
FD564321       --> CGGTAATGGCTGAAGTGGACAGGATTCTTAGACCACAAGGAACGTTTATA
EY948810       --> CGGTAATGGCTGAAGTGGACAGGATTCTTAGACCACAAGGAACGTTTATA
FY442785       --> CGGTAATGGCTGAAGTGGACAGGATTCTTAGACCACAAGGAACGTTTATA
EY950412       --> CGGTAATGGCTGAAGTGGACAGGATTCTTAGACCACAAGGAACGTTTATA
EY898654       --> ..................................................

               1001   -   1051
UN21695        --> GTAAGAGATGACATGGAAACAATTGGGGAAATTGAGAAGATGGTGAAATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV540390       <-- GTAAGAGATGACATGGAAACAATTGGGGAAATTGAGAAGATGGTGAAATC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX909306       <-- GTAAGAGATGACATGGAAACAATTGGGGAAATTGAGAAGATGGTGAAATT  Raphanus sativus cv Rat-Tail Radish #3870
EY944673       <-- GTAAGAGATGACATGGAAACAATTGGGGAAATTGAGAAGATGGTGAAATC  Raphanus sativus cv Rat-Tail Radish #3870
FD567836       <-- GTAAGAGATGACATGGAAACAATTGGGGAAATTGAGAAGATGGTGAAATC  Raphanus sativus var. oleiformis
EY944440       <-- GTAAGAGATGACATGGAAACAATTGGGGAAATTGAGAAGATGGTGAAATG  Raphanus sativus cv Rat-Tail Radish #3870
EX898759       <-- GTAAGAGATGACATGGAAACAATTGGGGAAATTGAGAAGATGGTGAAATG  Raphanus sativus cv Early Scarlet Globe
EY949093       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EX905619       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EX894439       --> GTAAGAGATGACATGGAAACAATTGGGGAAATTGAGAAGATGGTGAAATG  Raphanus sativus cv Early Scarlet Globe
FD564321       --> GTAAGAGATGACATGGAAACAATTGGGGAAATTGAGAAGATGGTGAAATC  Raphanus sativus var. oleiformis
EY948810       --> GTAAGAGATGACATGGAAACAATTGGGGAAATTGAGAAGATGGTGAAATG  Raphanus sativus cv Rat-Tail Radish #3870
FY442785       --> GTAAGAGATGACATGGAAACAATTGGGGAAATTGAGAAGATGGTGAAATC  Raphanus sativus cv GSK3-1
EY950412       --> GTAAGAGATGACATGGAAACAATTGGGGAAATTGAGAAGATGGTGAAATG  Raphanus sativus cv Rat-Tail Radish #3870
EY898654       --> ..........................................GTGAAATG  Raphanus raphanistrum subsp. maritimus

               1051   -   1101
UN21695        --> TCTGCAATGGAATGTAAAACTGACACAATCTAAAGATGGTGAAGGAGTGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV540390       <-- TCTGCAATGGAATGTAAAACTGTCACAATCCAAAGATGGTGAAGGAGTGC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX909306       <-- TCTGCAATGGAATGTAAAACTGACACAATCCAAAGATGGTGAAGGAGTGC  Raphanus sativus cv Rat-Tail Radish #3870
EY944673       <-- TCTGCAATGGAATGTAAAACTGACACAATCCAAAGATGGTGAAGGAGTGC  Raphanus sativus cv Rat-Tail Radish #3870
FD567836       <-- TTTGCAATGGAATGTAAAACTGACACAATCCAAAGATGGAGAAGGAGTGC  Raphanus sativus var. oleiformis
EY944440       <-- TCTGCAATGGAATGTAAAACTGACACAATCTAAAGATGGTGAAGGAGTGC  Raphanus sativus cv Rat-Tail Radish #3870
EX898759       <-- TCTGCAATGGAATGTAAAACTGACACAATCTAAAGATGGTGAAGGAGTGC  Raphanus sativus cv Early Scarlet Globe
EY949093       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EX905619       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EX894439       --> TCTGCAATGGAATGTAAAACTGACACAATCTAAAGATGGTGAAGGAGTGC  Raphanus sativus cv Early Scarlet Globe
FD564321       --> TCTGCAATGGAATGTAAAACTGACACAATCCAAAGATGGAGAAGGAGTGC  Raphanus sativus var. oleiformis
EY948810       --> TCTGCAATGGAATGTAAAACTGACACAATCTAAAGATGGTGAAGGAGTGC  Raphanus sativus cv Rat-Tail Radish #3870
FY442785       --> TCTGCAATGGAATGTAAAACTGACACAATCCAAAGATGGAGAAGGAGTGC  Raphanus sativus cv GSK3-1
EY950412       --> TCTGCAATGGAATGTAAAACTGACACAATCTAAAGATGGTGAAGGAGTGC  Raphanus sativus cv Rat-Tail Radish #3870
EY898654       --> TCTGCAATGTAATGTAAAACTGACACAATCTAAAGATGGTGAAGGAGTGC  Raphanus raphanistrum subsp. maritimus

               1101   -   1151
UN21695        --> TCTCTGTTCAGAAGTCATGGTGGCGTCCTACAGAGGTCGAGACCATTACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV540390       <-- TCTCTGTTCAGAAGTCATGGTGGCGTCCTACAGAGGTCGAGACCATTACA
EX909306       <-- TCTCTGTTCAGAAGTCATGGTGGCGTCCTACAGAGGTCGAGACCATTACA
EY944673       <-- TCTCTGTTCAGAAGTCATGGTGGCGTCCTACAGAGGTCGAGACCATTACA
FD567836       <-- TCTCTGTTCAGAAGTCATGGTGGCGTCCTACAGAGGTCGAGACCATTACA
EY944440       <-- TCTCTGTTCAGAAGTCATGGTGGCGTCCTACAGAGGTCGAGACCATTACA
EX898759       <-- TCTCTGTTCAGAAGTCATGGTGGCGTCCTACAGAGGTCGAGACCATTACA
EY949093       --> ..................................................
EX905619       --> ..................................................
EX894439       --> TCTCTGTTCAGAAGTCATGGTGGCGTCCTACAGAGGTCGAGACCATTACA
FD564321       --> TCTCTGTTCAGAAGTCATGGTGGCGTCCTACAGAGGTCGAGACCATTACA
EY948810       --> TCTCTGTTCAGAAGTCATGGTGGCGTCCTACAGAGGTCGAGACCATTACA
FY442785       --> TCTCTGTTCAGAAGTCATGGTGGCGTCCTACAGAGGTCGAGACCATTACA
EY950412       --> TCTCTGTTCAGAAGTCATGGTGGCGTCCTACAGAGGTCGAGACCATTACA
EY898654       --> TCTCTGTTCAGAAGTCATGGTGGCGTCCTACAGAGGTCGAGACCATTACA

               1151   -   1201
UN21695        --> TCTGCAATAGCAAAGGCAGGAGAGGTTTAAAATAGTTTTACGAGTAAGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV540390       <-- TCTGCAATAGCAAAGGCAGGAGAGGTTTAAAATAGTTTTATGAGTACGTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX909306       <-- TCTGCAATAGCAAAGGCAGGAGAGGTTTAAAATAGTTTTATGAGTAAGAT  Raphanus sativus cv Rat-Tail Radish #3870
EY944673       <-- TCTGCAATAGCAAAGGCAGGAGAGGTTTAAAATAGTTTTATGAGTAAGAT  Raphanus sativus cv Rat-Tail Radish #3870
FD567836       <-- TTTGCAATAGCAAAGGCAGGAGAGGTTTAAAATAGTCTTACGAGTAAGAT  Raphanus sativus var. oleiformis
EY944440       <-- TCTGCAATAGCAAAGGCAGGAGAGGTTTAAAATAGTTTTACGAGTAAGTT  Raphanus sativus cv Rat-Tail Radish #3870
EX898759       <-- TCTGCAATAGCAAAGGCAGGAGAGGTTTAAAATAGTTTTACGAGTAAGTT  Raphanus sativus cv Early Scarlet Globe
EY949093       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EX905619       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EX894439       --> TCTGCAATAGCAAAGGCAGGAGAGGTTTAAAATAGTTTTACGAGTAAGTT  Raphanus sativus cv Early Scarlet Globe
FD564321       --> TCTGCAATAGCAAAGGCAGGAGAGGTTTAAAATAGTCTTACGAGTAAGAT  Raphanus sativus var. oleiformis
EY948810       --> TCTGCAATAGC.......................................  Raphanus sativus cv Rat-Tail Radish #3870
FY442785       --> TCTGCAATAGCAAAGGCAGGAGAGGTTTAAAATAGTCTTACGAGTAAGAT  Raphanus sativus cv GSK3-1
EY950412       --> TCTGCAATAGCAAAGGCAGGAGAGGTT-AAAATA-TTTTACGAGTAAGTT  Raphanus sativus cv Rat-Tail Radish #3870
EY898654       --> TCTGCAATAGCAAAGGCAGGAGAGGTTTAAAATAGTTTTACGAGTAAGTT  Raphanus raphanistrum subsp. maritimus

               1201   -   1251
UN21695        --> GTTTCTTTTATGATCACACGTTGATTGTTTACTTGTATTATTAGTCCAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV540390       <-- GTTTCTTTTATGATCACACGGTTATTGTTTACTTGTATTATTAGTCCAAT
EX909306       <-- GTTTCTTTTATGATCACACGTTGATTGTTTACTTGTATTATTAGTCCAAT
EY944673       <-- GTTTCTTTTATGATCACACGTTGATTGTTTACTTGTATTATTAGTCCAAT
FD567836       <-- GTTGCTTTTATGATCACACGTTGATTGTTTACTTGTATTATTAGTCCAAT
EY944440       <-- GTTTCTTTTATGATCACACGTTGATTGTTTACTTGTATTATTAGTCCAAT
EX898759       <-- GTTTCTTTTATGATCACACGTTGATTGTTTACTTGTATTATTAGTCCAAT
EY949093       --> ..................................................
EX905619       --> ..................................................
EX894439       --> GTTTCTTTTATGATCACACGTTGATTGTTTACTTGTATTATTAGTCCAAT
FD564321       --> GTTGCTTTTATGATCACACGTTGATTGTTTACTTGTATTATTAGTCCAAT
EY948810       --> ..................................................
FY442785       --> GTTGCTTTTATGATCACACGTTGATTGTTTACTTGTATTATTAGTCCAAT
EY950412       --> GTT-CTTTTATGATCACACGTTGATTGTT-ACTTGTATTATTAGTCCAAT
EY898654       --> GTTTCTTTTATGATCACACGTTGATTGTTTACTTGTATTATTAGTCCAAT

               1251   -   1301
UN21695        --> ATTTTGTATCCTCTTTTTGCATGACGAAAATTGTATACAAGAC--AC--T
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV540390       <-- ATTTTGTATCCTCTTTTTGCATGACGAAAATTGTATACAAGAC--AC--T
EX909306       <-- ATATTGTATCCTTTTTTTGCATGACTAAAATTGTATACAAGACGCAC--T
EY944673       <-- ATATTGTATCCTTTTTTAGCATGACGAAAATTGTATACAAGAC--ACACT
FD567836       <-- ATTTTGTATCCTCTTTTTGCATGACGAAAATTGTATACAAGAC--AC--T
EY944440       <-- ATTTTGTATCCTCTTTTTGCATGACGAAAATTGTATACAAGAC--AC--T
EX898759       <-- ATTTTGTATCCTCTTTTTGCATGACGAAAATTGTATACAAGAC--AC--T
EY949093       --> ..................................................
EX905619       --> ..................................................
EX894439       --> ATTTTGTATCCTCTTTT-GCATGACGAAA-TTGTATACA-GAC--AC--T
FD564321       --> ATTTTGTATCCTCTTTTTGCATGACGAAAATTGTATACA-GAC--AC--T
EY948810       --> ..................................................
FY442785       --> ATTTTGTATCCTCTTTTTGCATGACGAAAATTGTATACAAGAC--AC--T
EY950412       --> ATTTTG-ATCCTCTTTTTGCATGACGAAAATTG-ATACAAGAC--AC--T
EY898654       --> ATTTTGTACCCTCTTTTTGCATGACGAAAATTGTATACAAGAC--AC--T

               1301   -   1351
UN21695        --> TGTCTCAGTAGTGTAAGCTTTTATGAGTTTTTGATTTGGTCCTAAACCAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV540390       <-- TTTCTCAATAGTGTAAACTTTTATGAGc......................
EX909306       <-- TTTCTCAATAGTGTAAACTTTTATGAGTTTTTGATTTGGTCCc.......
EY944673       <-- TTTCTCAATAGTGTAAACTTTTATGAGct.....................
FD567836       <-- AGTCTCAGTAGTGTAAGCTTTTATG.........................
EY944440       <-- TGTCTCAGTAGTG.....................................
EX898759       <-- TGTCTCAGTAGTGTAAGCTTTTATGAGTTTTTGATTTGGTC.........
EY949093       --> ..................................................
EX905619       --> ..................................................
EX894439       --> -GTCTCAGTAG.......................................
FD564321       --> AGTCTCAGTAGTGTAAGCTTTTATG.........................
EY948810       --> ..................................................
FY442785       --> TGTCTCAGTAGTG.....................................
EY950412       --> TGTCTC............................................
EY898654       --> TGTCTCAGTAGTGTAAGCTTTTATGAGTTTTTGATTTGGTCCTAAACCAT

               1351   -   1401
UN21695        --> GAATTGAAATCTTTATTATAACTACTCCAGCAGAACAGTACACTCATTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV540390       <-- ..................................................
EX909306       <-- ..................................................
EY944673       <-- ..................................................
FD567836       <-- ..................................................
EY944440       <-- ..................................................
EX898759       <-- ..................................................
EY949093       --> ..................................................
EX905619       --> ..................................................
EX894439       --> ..................................................
FD564321       --> ..................................................
EY948810       --> ..................................................
FY442785       --> ..................................................
EY950412       --> ..................................................
EY898654       --> GAATTGAAATCTTTATTATAACTACTCCAGCAGAACAGTACACTCATTCT

               1401   -   1451
UN21695        --> GGATT
                   ~~~~~
EV540390       <-- .....
EX909306       <-- .....
EY944673       <-- .....
FD567836       <-- .....
EY944440       <-- .....
EX898759       <-- .....
EY949093       --> .....
EX905619       --> .....
EX894439       --> .....
FD564321       --> .....
EY948810       --> .....
FY442785       --> .....
EY950412       --> .....
EY898654       --> GGATT