Library    |     Search    |     Batch query    |     SNP    |     SSR  

Alignment for radish unigene UN21696

               1      -     51
UN21696        --> CGACTGAAATCATCTTCCTCATGCTATTATATAAGAACAAAAAGAAGAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD577849       <-- .............................................AGAAA
EX747779       <-- ............................................atGAAA
FD938404       <-- ..................................................
FD576983       <-- ..................................................
EV549784       <-- ..................................................
FD581373       --> CGACTGAAATCATCTTCCTCATGCTATTATATAAGAACAAAAAGAAGAAA
EV545184       --> .GACTGAAATCATCTTCCTCATGCTATTATATAAGAACAAAAAGAAGAAA
FD934785       --> .GACTGAAATCATCTTCCTCATGCTATTATATAAGAACAAAAAGAAGAAA
EX751886       --> ............................................atGAAA

               51     -    101
UN21696        --> ACATATACATATTATTCTAGTATGTATCAGAAATAGTACAAACGCCACAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD577849       <-- ACATATACATATTATTCTAGTATGTATCAGAAATAGTACAAACGCCACAA
EX747779       <-- ACATATACATATTATTCTAGTATGTATCAGAAATAGTACAAACGCCACAA
FD938404       <-- ...........................CAGAAATAGTACAAACGCCACAA
FD576983       <-- ..................................................
EV549784       <-- ..................................................
FD581373       --> ACATATACATATTATTCTAGTATGTATCAAAAATAGTACAAACGCCACAA
EV545184       --> ACATATACATATTATTCTAGTATGTATCAGAAATAGTACAAACGCCACAA
FD934785       --> ACATATACATATTTTTTTAGTATGTATCAGAAATAGTACAAACGCCACAA
EX751886       --> ACATATACATATTATTCTAGTATGTATCAGAAATAGTACAAACGCCACAA

               101    -    151
UN21696        --> CCCTGAGCCAAAAAA-CCACAGCTATGGCCCATAATCATTTTTTATACCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD577849       <-- CCCTGAGCCAAAAAA-CCACAGCTATGGCCCATAATCATTTTTTATACCG
EX747779       <-- CCCTGAGCCAAAAA--CCACAGCTATGGCCCATAATCATTTTTTATACCG
FD938404       <-- CC-TGAGCCAAAAAA-CCACAGCTATGGCCCATA-TCATTTTT-ATACCG
FD576983       <-- ...TGAGCCAAAAAA-CCACAGCTATGGCCCATAATCATTTTTTATACCG
EV549784       <-- ..................................................
FD581373       --> CCCTGAGCCAAAAAA-CCACAGCTATGGCCCATAATCATTTTTTATACCG
EV545184       --> CCCTGAGCCAAAAAA-CCACAGCTATGGCCCATAATCATTTTTTATACCG
FD934785       --> CCCTGAGCCAAAAAAACCACAGCTATGGCCCATAATCATTTTTTATACCG
EX751886       --> CCCTGAGCCAAAAAA-CCACAGCTATGGCCCATAATCATTTTTTATACCG

               151    -    201
UN21696        --> CCGATACATACACAACCTTAGCCTAAACATCTTTTCGGCATCATCATAGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD577849       <-- CCGATACATACACAACCTTAGCCTAAACATCTTTTCGGCATCATCATAGT
EX747779       <-- CCGATACATACACAACCTTAGCCTAAACATCTTTTCGGCATCATCATAGT
FD938404       <-- CCGATACATACACAAC-TTAGC-TAAACATCTTT-CGGCATCATCATAGT
FD576983       <-- CCGATACATACACAACTTTAGCCTAAACATCTTTTCGGCATCATCATAGT
EV549784       <-- ..................................................
FD581373       --> CCGATACATACACAACCTTAGCCTAAACATCTTTTCGGCATCATCATAGT
EV545184       --> CCGATACATACACAACCTTAGCCTAAACATCTTTTCGGCATCATCACAGT
FD934785       --> CCGATACATACACAACCTTAGCCTAAACATCTTTTCGGCATCATCATAGT
EX751886       --> CCGATACATACACAACCTTAGCCTAAACATCTTTTCGGCATCATCATAGT

               201    -    251
UN21696        --> AATCATTTCATCACATCGCATACAAACATAAACCATTGGGTCGAACCATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD577849       <-- AATCATGTCATCACATCGCATACAAACATAAACCATTGGGTCGAACCATG
EX747779       <-- AATCATTTCATCACATCGCATACAAACATAAACCATTGGGTCGAACCATG
FD938404       <-- AATCATTTCATCACATCGCATACAAACATAAACCATTGGGTCGAACCATG
FD576983       <-- AATCATGTCATCACATCGCATACAAACATAAACCATTGGGTCGAACCATG
EV549784       <-- ..................................................
FD581373       --> AATCATGTCATCACATCGCATACAAACATAAACCATTGGGTCGAACCATG
EV545184       --> AATCATTTCATCACATCGCATACAAACATAAACCATTGGGTCGAACCATG
FD934785       --> AATCATTTCATCACATCGCATACAAACATAAACCATTGGGTCGAACCATG
EX751886       --> AATCATTTCATCACATCGCATACAAACATAAACCATTGGGTCGAACCATG

               251    -    301
UN21696        --> CCACAATCTCTCTTTCTAGTGAGTGAGAGCCACTGCAGCTTCTTGAACCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD577849       <-- CCACAATCTCTCTTTCTAGTGAGTGAGAGCCACTGCAGCTTCTTGAACCA
EX747779       <-- CCACAATCTCTCGTTCTAGTGAGTGAGAGCCACTGCAGCTTCTTGAACCA
FD938404       <-- CCACAATCTCTCTTTCTAGTGAGTGAGAGCCACTGCAGCTTCTTGAGCCA
FD576983       <-- CCACAATCTCTCTTTCTAGTGAGTGAGAGCCACTGCAGCTTCTTGAACCA
EV549784       <-- ..................................................
FD581373       --> CCACAATCTCTCTTTCTAGTGAGTGAGAGCCACTGCAGCTTCTTGAACCA
EV545184       --> CCACAATCTCTCTTTCTAGTGAGTGAGAGCCACTGCAGCTTCTTGAACCA
FD934785       --> CCACAATCTCTCTTTCTAGTGAGTGAGAGCCACTGCAGCTTCTTGAGCCA
EX751886       --> CCACAATCTCTCGTTCTAGTGAGTGAGAGCCACTGCAGCTTCTTGAACCA

               301    -    351
UN21696        --> GAGGCTGAGTAACATGCACAAAATGCTCAGCTTCACGCTCCACTTCTTCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD577849       <-- GAGGCTGAGTAACATGCACAAAATGCTCAGCTTCACGCTCCACTTCTTCC
EX747779       <-- GAGGCTGAGTAACATGCACAAAATGCTCAGCTTCACGCTCCACTTCTTCC
FD938404       <-- GAGGCTGAGTAACATGCACAAAATGCTCAGCTTCACGCTCCACTTCTTCC
FD576983       <-- GAGGCTGAGTAACATGCACAAAATGCTCAGCTTCACGCTCCACTTCTTCC
EV549784       <-- ..................................................
FD581373       --> AAGGCTGAGTAACATGCACAAAATGCTCAGCTTCACGCTCCACTTCTTCC
EV545184       --> GAGGCTGAGTAACATGCACAAAATGCTCAGCTTCACGCTCCACTTCTTCC
FD934785       --> GAGGCTGAGTAACATGCACAAAATGCTCAGCTTCACGCTCCACTTCTTCC
EX751886       --> GAGGCTGAGTAACATGCACAAAATGCTCAGCTTCACGCTCCACTTCTTCC

               351    -    401
UN21696        --> CGACACCTATCAGAGTCTCTCCCTTCACCCATTTTTTTCACAAACCCTAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD577849       <-- CGACACCTATCAGAGTCTCTCCCTTCACCCATTTTTTTCACAAACCCTAC
EX747779       <-- CGACACCTATCAGAGTCTCTCCCTTCACCCATTTTTTTCACAAACCCTAC
FD938404       <-- CGACACCTATCAGAGTCTCTCCCTTCACCCATTTTTTTCACAAACCCTAC
FD576983       <-- CGACACCTATCAGAGTCTCTCCCTTCACCCATTTTTTTCACAAACCCTAC
EV549784       <-- ..................................................
FD581373       --> CGACACCTATCAAAGTCTCTCCCTTCACCCATTTTTTTCACAAACCCTAC
EV545184       --> CGACACCTGTCAGAGTCTCTCCCTTCACCCATTTTTTTCACAAACCCTAC
FD934785       --> CGACACCTATCAGAGTCTCTCCCTTCACCCATTTTTTTCACAAACCCTAC
EX751886       --> CGACACCTATCAGAGTCTCTCCCTTCACCCATTTTTTTCACAAACCCTAC

               401    -    451
UN21696        --> AAACTTCCCCCAGTTATCCGCCTTAAACAGCTCCGGGTTCATCCTCAGGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD577849       <-- AAACTTCCCCCAGTTATCCGCCTTAAACAGCTCCGGGTTCATCCTCAGGT  Raphanus sativus cv Rat-Tail Radish #3870
EX747779       <-- AAACTTCCCCCAATTTTCGGCCTTAAACAGCTCCGGGTTCATCCTCAGGT  Raphanus raphanistrum subsp. maritimus
FD938404       <-- AAACTTCCCCCAGTTATCCGCCTTAAACAGCTCCGGGTTCATCCTCAGGT  Raphanus sativus var. oleiformis
FD576983       <-- AAACTTCCCCCAGTTATCCGCCTTAAACAGCTCCGGGTTCATCCTCAGGT  Raphanus sativus cv Rat-Tail Radish #3870
EV549784       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD581373       --> AAACTTCCCCCAGTTATCCGCCTTAAACAGCTCCGGGTTCATCCTCAGGT  Raphanus sativus cv Rat-Tail Radish #3870
EV545184       --> AAACTTCCCCCAATTTTCGGCCTTAAACAGCTCCGGGTTCATCCTCAGGT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD934785       --> AAACTTCCCCCAGTTATCCGCCTTAAACAGCTCCGGGTTCATCCTCAGGT  Raphanus sativus var. oleiformis
EX751886       --> AAACTTCCCCCAATTTTCGGCCTTAAACAGCTCCGGGTTCATCCTCAGGT  Raphanus raphanistrum subsp. maritimus

               451    -    501
UN21696        --> ACGTAAA-CGCACACATCTCTCTGTTTTCTCCCTCTTGGTTCTGATCAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD577849       <-- ACGTAAA-CGCACACATCTCTCTGTTc.......................
EX747779       <-- ACGTAAAACGCACACATCTCTCTGTTTTCTCCCTCTTGGTTCTGATCAAA
FD938404       <-- ACGTAAA-CGCACACATCTCTCTGTTTTTCCCCGC--TGTTCTGATCAAA
FD576983       <-- ACGTAAA-CGCACACATCTCTCTGTTTTCTCCCTCTTGGTTCTGATCAAA
EV549784       <-- ..................................................
FD581373       --> ACGTAAA-CGCACACATCTCTCTGTTTTCTCCCTCTTGGTTCTGATCAAA
EV545184       --> ACGTAAA-CGCACACATCTCTCTGTTTTCTCCCTCTTGGTTCTGATCAAA
FD934785       --> ACGTAAA-CGCACACATCTCTCTGTTTTTCCCCGCT--GTTCTGATCAAA
EX751886       --> ACGTAAAACGCACACATCTCTCTGTTTTCTCCCTCTTGGTTCTGATCAAA

               501    -    551
UN21696        --> GCTCAGTGCAGACGCCTTGAGGATCTGCTCGTGCGCGTAGTCATCGTACC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD577849       <-- ..................................................
EX747779       <-- GCTCAGTGCAGACGCCTTGAGGATCTGCTCGTGCGCGTAGTCATCGTACC
FD938404       <-- GCTCAGCGCCGACGCCTTGAGGATCTGCTCGTGCGCGTAGTCATCGTACC
FD576983       <-- GCTCAGTGCAGACGCCTTGAGAATCTGCTCGTGTGCGTAGTCATCGTACC
EV549784       <-- ..................................................
FD581373       --> GCTCAGTGCAAACGCCTTGAGAATCTGCTCGTGTGCGTAGTCATCGTACC
EV545184       --> GCTCAGTGCAGACGCCTTGAGGATCTGCTCGTGCGCGTAGTCATCGTACC
FD934785       --> GCTCAGCGCCGACGCCTTGAGGATCTGCTCGTGCGCGTAGTCATCGTACC
EX751886       --> GCTCAGTGCAGACGCCTTGAGGATCTGCTCGTGCGCGTAGTCATCGTACC

               551    -    601
UN21696        --> TAGGCAATGCGTTTTCACCAGCCAGAGGAACTTCTGCAGCTAGAGTAGCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD577849       <-- ..................................................
EX747779       <-- TAGGCAATGCGTTTTCACCAGCCAGAGGAACTTCTGCAGCTAGAGTAGCT
FD938404       <-- TAGGCAGTGCGTTTTCACCAGCCAGAGGAACTTCTGCAGCTAGAGTAGCT
FD576983       <-- TAGGCAATGCGTTTTCACCAGCCAGAGGAACTTCTGCAGCTAGAGTAGCT
EV549784       <-- ..................................................
FD581373       --> TAGGCAATGCGTTTTCACCAGCCAGAGGAACTTCTGCAGCTAGAGTAGCT
EV545184       --> TAGGCAATGCGTTTTCACCAGCCAGAGGAACTTCTGCAGCTAGAGTAGCT
FD934785       --> TAGGCAGTGCGTTTTCACCAGCCAGAGGAACTTCTGCAGCTAGAGTAGCT
EX751886       --> TAGGCAATGCGTTTTCACCAGCCAGAGGAACTTCTGCAGCTAGAGTAGCT

               601    -    651
UN21696        --> AGAGCCACCTGGTTCACTAGCTTCTCTGGTGCACAAAGCGCGTCTTGAGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD577849       <-- ..................................................
EX747779       <-- AGAGCCACCTGGTTCACTAGCTTCTCTGGTGCACAAAGCGCGTCTTGAGG
FD938404       <-- AGAGCCACCTGGTTCACTAGCTTCTCTGGTGCACAAAGCGCGTCTTGAGG
FD576983       <-- AGAGCCACCTGGTTCACTAGCTTCTCTGGTGCACAAAGCGCGTCTTGAGG
EV549784       <-- ..................................................
FD581373       --> AGAGCCACCTGGTTCACTAGCTTCTCTGGTGCACAAAGCGCGTCTTGAGG
EV545184       --> AGAGCCACCTGGTTCACTAGCTTCTCTGGTGCACAAAGCGCGTCTTGAGG
FD934785       --> AGAGCCACCTGGTTCACTAGCTTCTCTGGTGCACAAAGCGCGTCTTGAGG
EX751886       --> AGAGCCACCTGGTTCACTAGCTTCTCTGGTGCACAAAGCGCGTCTTGAGG

               651    -    701
UN21696        --> CTGCTCGTGGTCTCTCATCTCGATGCACGTGAAGTTGAATATGGCGTTGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD577849       <-- ..................................................
EX747779       <-- CTGCTCGTGGTCTCTCATCTCGATGCACGTGAAGTTGAATATGGCGTTGT
FD938404       <-- CTGCTCGTGGTCTCTCATCTCGATGCGCGTGAAGTTGAATATGGCGTTGT
FD576983       <-- CTGCTCGTGGTCTCTCATCTCGATGCACGTGAAGTTGAATATGGCGTTGT
EV549784       <-- ..................................................
FD581373       --> CTGCTCGTGGTCTCTCATCTCGATGCACGTGAAGTTGAATATGGCGTTGT
EV545184       --> CTGCTCGTGGTCTCTCATCTCGATGCACGTGAAGTTGAATATGGCGTTGT
FD934785       --> CTGCTCGTGGTCTCTCATCTCGATGCGCGTGAAGTTGAATATGGCGTTGT
EX751886       --> CTGCTCGTGGTCTCTCATCTCGATGCACGTGAAGTTGAATATGGCGTTGT

               701    -    751
UN21696        --> GTCTGGCTAGCATTTGAGCGATCGGGAGGTATCCGTCTCTGAACCTAGTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD577849       <-- ..................................................
EX747779       <-- GTCTGGCTAGCATTTGAGCGATCGGGAGGTATCCGTCTCTGAACCTAGTG
FD938404       <-- GTCTGGCTAGCATTTGAGCGATGGGGAGGTATCCGTCTCTGAACCTAGTG
FD576983       <-- GTCTGGCTAGCATTTGAGCGATCGGGAGGTATCCGTCTCTc.........
EV549784       <-- ..................................................
FD581373       --> GTCTGGCTAGCATTTGAGCGATCG..........................
EV545184       --> GTCTGGCTAGCATTTGAGCGATCGGGAGGTATCCGTCTCTGAACCTAGTG
FD934785       --> GTCTGGCTAGCATTTGAGCGATGGGGAGGTATCCGTCTCTGAACCTAGTG
EX751886       --> GTCTGGCTAGCATTTGAGCGATCGGGAGGTATCCGTCTCTGAACCTAGTG

               751    -    801
UN21696        --> TTATAGTATCCTGCTGTGAGCTCAGGGGCGTGAGAGCGTGTCCCGTAGTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD577849       <-- ..................................................
EX747779       <-- TTATAGTATCCTGCTGTc................................
FD938404       <-- TTGTAGTATCCTGCTGTGAGCTCAGGGGCGTGAAAGCGTGTCCCGTAGTG
FD576983       <-- ..................................................
EV549784       <-- ................TGAGCTCAGGGGCGTGAGAGCGTGTCCCGTAGTG
FD581373       --> ..................................................
EV545184       --> TTATAGTATCCTGCTGTGAGCTCAGGGGCGTGAGAGCGTGTCCCGTAGTG
FD934785       --> TTGTAGTATCCTGCTGTGAGCTCAGGG-CGTGAAAGCGTGTCCCGTAGTG
EX751886       --> TTATAGTATCCTGCTGTc................................

               801    -    851
UN21696        --> CCAGTGGATTCCAGCGACTTTGACCGAGATTTTGACACCTGTGTCTTGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD577849       <-- ..................................................
EX747779       <-- ..................................................
FD938404       <-- CCAGTGGATTCCAGCGACTTTGACCGAGATTTTGACACCTGTGTCTTGGA
FD576983       <-- ..................................................
EV549784       <-- CCAGTGGATTCCAGCGACTTTGACCGAGATTTTGACAC-TGTGTCTTGGA
FD581373       --> ..................................................
EV545184       --> CCAGTGGATTCCAGCGACTTTGACCGAGATTTTGACACCTGTGTCTTGGA
FD934785       --> CCAGTGGATTCCAGCGACTTTGACCGAGATTT-GACACCTGTGTCT-GGA
EX751886       --> ..................................................

               851    -    901
UN21696        --> ATATCGATTTGGCTGAGGAAAGGATACGCTCGCCGTGATCCAGCAACATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD577849       <-- ..................................................
EX747779       <-- ..................................................
FD938404       <-- ATATCGATTTGGCTGAGGAAAGGATACGCTCGCCGTGATCCAGCAACc..
FD576983       <-- ..................................................
EV549784       <-- ATATCGATTTGGCTGAGGAAAGGATACGCTCGCCGTGATCCAGCAACATC
FD581373       --> ..................................................
EV545184       --> ATATCGATTTGGCTGAG-AAAGGATACGCTCGCCGTGAT...........
FD934785       --> AT................................................
EX751886       --> ..................................................

               901    -    951
UN21696        --> TGGGAGTACCACGTGAGGAAGAACTCTCCGTACTCTGTGTTCCAACCACC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD577849       <-- ..................................................
EX747779       <-- ..................................................
FD938404       <-- ..................................................
FD576983       <-- ..................................................
EV549784       <-- TGGGAGTACCACGTGAGGAAGAACTCTCCGTACTCTGTGTTCCAACCACC
FD581373       --> ..................................................
EV545184       --> ..................................................
FD934785       --> ..................................................
EX751886       --> ..................................................

               951    -   1001
UN21696        --> GTCTTCCTTTTTGAAGAACTGAGTGTCTTCCGGCCAGTTATTGTAGTGAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD577849       <-- ..................................................
EX747779       <-- ..................................................
FD938404       <-- ..................................................
FD576983       <-- ..................................................
EV549784       <-- GTCTTCCTTTTTGAAGAACTGAGTGTCTTCCGGCCAGTTATTGTAGTGAC
FD581373       --> ..................................................
EV545184       --> ..................................................
FD934785       --> ..................................................
EX751886       --> ..................................................

               1001   -   1051
UN21696        --> CAGCATCAGTTGGGCCAGTACCGCCCCACTCTGGCTCTCCATAAGATTCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD577849       <-- ..................................................
EX747779       <-- ..................................................
FD938404       <-- ..................................................
FD576983       <-- ..................................................
EV549784       <-- CAGCATCAGTTGGGCCAGTACCGCCCCACTCTGGCTCTCCATAAGATTCA
FD581373       --> ..................................................
EV545184       --> ..................................................
FD934785       --> ..................................................
EX751886       --> ..................................................

               1051   -   1101
UN21696        --> GCTGCTGCTTTCAAGCTGCTCAACGAGTACTTGTCATAACACTGGAAGGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD577849       <-- ..................................................
EX747779       <-- ..................................................
FD938404       <-- ..................................................
FD576983       <-- ..................................................
EV549784       <-- GCTGCTGCTTTCAAGCTGCTCAACGAGTACTTGTCATAACACTGGAAGGC
FD581373       --> ..................................................
EV545184       --> ..................................................
FD934785       --> ..................................................
EX751886       --> ..................................................

               1101   -   1151
UN21696        --> TCCAATCCCCGGGAACCTCCATGTTCCGTCTTGCTCGGGGTATGAAGGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD577849       <-- ..................................................
EX747779       <-- ..................................................
FD938404       <-- ..................................................
FD576983       <-- ..................................................
EV549784       <-- TCCAATCCCCGGGAACCTCCATGTTCCGTCTTGCTCGGGGTATGAAGGAT
FD581373       --> ..................................................
EV545184       --> ..................................................
FD934785       --> ..................................................
EX751886       --> ..................................................

               1151   -   1201
UN21696        --> AACGCAGCTCTCCTGCGGGTCCCATTCCCACTTGGATTTCCACAATGGTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD577849       <-- ..................................................
EX747779       <-- ..................................................
FD938404       <-- ..................................................
FD576983       <-- ..................................................
EV549784       <-- AACGCAGCTCTCCTGCGGGTCCCATTCCCACTTGGATTTCCACAATGGTG
FD581373       --> ..................................................
EV545184       --> ..................................................
FD934785       --> ..................................................
EX751886       --> ..................................................

               1201   -   1251
UN21696        --> TCTCCGAGAAGATGCTTGAAGTTGTCTCTGAAAGCACGCATGAAATCGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD577849       <-- ..................................................
EX747779       <-- ..................................................
FD938404       <-- ..................................................
FD576983       <-- ..................................................
EV549784       <-- TCTCCGAGAAGATGCTTGAAGTTGTCTCTGAAAGCACGCATGAAATCGGA
FD581373       --> ..................................................
EV545184       --> ..................................................
FD934785       --> ..................................................
EX751886       --> ..................................................

               1251   -   1301
UN21696        --> ATAGCATTGGACGGGTGTTCTACCTTTGAGAACAGGGAGTGTATCAGCGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD577849       <-- ..................................................
EX747779       <-- ..................................................
FD938404       <-- ..................................................
FD576983       <-- ..................................................
EV549784       <-- ATAGCATTGGACGGGTGTTCTACCTTTGAGAACAGGGAGTGTATCAGCGC
FD581373       --> ..................................................
EV545184       --> ..................................................
FD934785       --> ..................................................
EX751886       --> ..................................................

               1301   -   1351
UN21696        --> CAAGTGAGATATACTCGTGGTTCCTTCTTCCCCACTGATCAGTGTATGCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD577849       <-- ..................................................
EX747779       <-- ..................................................
FD938404       <-- ..................................................
FD576983       <-- ..................................................
EV549784       <-- CAAGTGAGATATACTCGTGGTTCCTTCTTCCCCACTGATCAGTGTATGCA
FD581373       --> ..................................................
EV545184       --> ..................................................
FD934785       --> ..................................................
EX751886       --> ..................................................

               1351   -   1401
UN21696        --> AGATCTGGATCCTTGTCAACCTCTTCAACAACCCACTGAGGCAGAGGAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD577849       <-- ..................................................
EX747779       <-- ..................................................
FD938404       <-- ..................................................
FD576983       <-- ..................................................
EV549784       <-- AGATCTGGATCCTTGTCAACCTCTTCAACAACCCACTGAGGCAGAGGAAT
FD581373       --> ..................................................
EV545184       --> ..................................................
FD934785       --> ..................................................
EX751886       --> ..................................................

               1401   -   1451
UN21696        --> AGTGACAGAGTCACCAACGTTACCACCGCACTGATGAAACGACATAACAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD577849       <-- ..................................................
EX747779       <-- ..................................................
FD938404       <-- ..................................................
FD576983       <-- ..................................................
EV549784       <-- AGTGACAGAGTCACCAACGTTACCACCGCACTGATGAAACGACATAACAG
FD581373       --> ..................................................
EV545184       --> ..................................................
FD934785       --> ..................................................
EX751886       --> ..................................................

               1451   -   1501
UN21696        --> CCTGAA
                   ~~~~~~
FD577849       <-- ......
EX747779       <-- ......
FD938404       <-- ......
FD576983       <-- ......
EV549784       <-- CCTGAA
FD581373       --> ......
EV545184       --> ......
FD934785       --> ......
EX751886       --> ......