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Alignment for radish unigene UN21704

               1      -     51
UN21704        --> GGAGAAGAGCCAACAACAACAACAACAACAACAACAACAACAAGCGTGTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV545263       <-- ..................................................
FY430118       <-- ..................................................
EX761488       <-- ..................................................
FD568007       <-- ..................................................
EV545977       <-- ..................................................
FD950095       --> GGAGAAGAGCCAACAACAACAACAACAACAACAACAACAACAAGCGTGTC
EV549877       --> ....gagaagagcCAACAACAACAACAACAACAACAACAACAAGCGTGTC
EW725079       --> ....ggaggtcagaagagcCAACAACAACAACAACAACAACAAGCGTGTC
EV550746       --> ......................ggACAACAACAACAACAACAAGCGTGTC
FY450141       --> ..................................................
FY452630       --> ..................................................
EY938503       --> ..................................................
FY436410       --> ..................................................

               51     -    101
UN21704        --> TTCTTGACTGCTTCGTCTTCTTCTCCTTTCCCACGTAATTCCCCCCCCCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV545263       <-- ..................................................
FY430118       <-- ..................................................
EX761488       <-- ..................................................
FD568007       <-- ..................................................
EV545977       <-- ..................................................
FD950095       --> TTCTTGACTGCTTCGTCTTCTTCTCCTTTCCCACGTAATTCCCCCCC--A
EV549877       --> TTCTTGACTGCTTCGTCTTCTTCTCCTTTCCCACGTAATTCCCCCCCCCA
EW725079       --> TTCTTGACTGCTTCGTCTTCTTCTCCTTTCCCACGTAATTCCCCCCCACA
EV550746       --> TTCTTGACTGCTTCGTCTTCTTCTCCTTTCCCACGTAATTCCCCCCCCCA
FY450141       --> ..................................................
FY452630       --> ..................................................
EY938503       --> ..................................................
FY436410       --> ..................................................

               101    -    151
UN21704        --> AATCAACTCTCTCTCTCT--AGGGCTTAATCAATCATGAACCTTCTTCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV545263       <-- ..................................................
FY430118       <-- ..................................................
EX761488       <-- ..................................................
FD568007       <-- ..................................................
EV545977       <-- ..................................................
FD950095       --> AATCAACTCTCTCTCTCTCTGGGGCTCAATCAATCATGAACCTTCTTCTT
EV549877       --> AATCAACTCTCTCTCTCT--AGGGCTTAATCAATCATGAACCTTCTTCTT
EW725079       --> AATCAACTCTCTCT------AGGGCTTAATCAATCATGAACCTTCTTCTT
EV550746       --> AATCAACTCTCTCTCTCT--AGGGCTTAATCAATCATGAACCTTCTTCTT
FY450141       --> .................................TCATGAACCTTCTTCTT
FY452630       --> .................................TCATGAACCTTCTTCTT
EY938503       --> ..................................................
FY436410       --> ..................................................

               151    -    201
UN21704        --> CCTCTCTTCTAAACTTCTCCACGCCTAAACTTCCCCTCTCTCTCTAATTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV545263       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FY430118       <-- ..................................................  Raphanus sativus cv GSK3-1
EX761488       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD568007       <-- ..................................................  Raphanus sativus var. oleiformis
EV545977       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD950095       --> CCTCTCTTCTAAACTTCTCCACGCCTAAACTTCCCCTCTCTCTCTAATTC  Raphanus sativus cv Early Scarlet Globe
EV549877       --> CCTCTCTTCTAAACTTCTCCACGCCTAAACTTCCCCTCTCTCTCTAATTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EW725079       --> CCACTCTTCTAAACTTCTCCACGCCTAAACTTCCCCTCTCTCTCTAATTC  Raphanus sativus cv Early Scarlet Globe
EV550746       --> CCTCTCTTCTAAACTTCTCCACGCCTAAACTTCCCCTCTCTCTCTAATTT  Raphanus raphanistrum subsp. raphanistrum (NY)
FY450141       --> CCTCTCTTCTAA-CTTCTCCACGCCTAAACTTCCCCTCTCTCTCTAATTT  Raphanus sativus cv GSK3-1
FY452630       --> CCTCTCTTCTAA-CTTCTCCACGCCTAAACTTCCCCTCTCTCTCTAATTT  Raphanus sativus cv GSK3-1
EY938503       --> ..................ggACGCCTAAACTTCCCCTCTCTCTCTAATTC  Raphanus sativus cv Early Scarlet Globe
FY436410       --> ..................................................  Raphanus sativus cv GSK3-1

               201    -    251
UN21704        --> ATTCCCCTTGATCGGCGACGGAGAAAGCCAAGTCCGAAAATCTGGAAATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV545263       <-- ..................................................
FY430118       <-- ..................................................
EX761488       <-- ..................................................
FD568007       <-- ..................................................
EV545977       <-- ..................................................
FD950095       --> ATTCCCCTTGATCGGCGACGGAGAAAGCCAAGTCCGAAAATCTGGAAATG
EV549877       --> ATTCCCCTTGATCGGCGACGGAGAAAGCCAAGTCCGAAAATCTGGAAATG
EW725079       --> ATTCCCCTTGATCGGCGACGGAGAAAGCCAAGTCCGAAAAGCAGGAAATG
EV550746       --> ATTCCCCTTGATCGGCGACGGAGAAAGCCAAGTCCGAAAATCTGGAAATG
FY450141       --> ATTCCCCTTGATCGGCGACGGAGAAAGCCAAGTCCGAAAATCTGGAAATG
FY452630       --> ATTCCCCTTGATCGGCGACGGAGAAAGCCAAGTCCGAAAATCTGGAAATG
EY938503       --> ATTCCCCTTGATCGGCGACGGAGAAAGCCAAGTCCGAAAAGCAGGAAATG
FY436410       --> ....CCCTTGATCGGCGACGGAGAAAGCCAAGTCCGAAAATCTGGAAATG

               251    -    301
UN21704        --> TCCGTCTCCGAGCTCAAAGAGCGCCACGCCGTAGCTACAGAGACCGTTAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV545263       <-- ..................................................
FY430118       <-- ..................................................
EX761488       <-- ..................................................
FD568007       <-- ..................................................
EV545977       <-- ..................................................
FD950095       --> TCCGTCTCCGAGCTCAAAGAGCGCCACGCCGTAGCTACAGAGACCGTTAA
EV549877       --> TCCGTCTCCGAGCTCAAAGAGCGCCACGCCGTAGCTACAGAGACCGTTAA
EW725079       --> TCCGTCTCCGAGCTCAAAGAGCGCCACACCGTCGCTACAGAGACCGTTAA
EV550746       --> TCCGTCTCCAAGCTCAAAGAGCGCCACGCCGTAGCTACAGAGACCGTTAA
FY450141       --> TCCGTCTCCGAGCTCAAAGAGCGCCACGCCGTAGCTACAGAGACCGTTAA
FY452630       --> TCCGTCTCCGAGCTCAAAGAGCGCCACGCCGTAGCTACAGAGACCGTTAA
EY938503       --> TCCGTCTCCGAGCTCAAAGAGCGCCACACCGTCGCTACAGAGACCGTTAA
FY436410       --> TCCGTCTCCGAGCTCAAAGAGCGCCACGCCGTAGCTACAGAGACCGTTAA

               301    -    351
UN21704        --> CAACCTCCGAGATAGACTTAAACAAAGACGCCTCCAGCTTCTAGATACCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV545263       <-- ..................................................
FY430118       <-- ..................................................
EX761488       <-- ..................................................
FD568007       <-- ..................................................
EV545977       <-- ..................................................
FD950095       --> CAACCTCCGAGATAGACTTAAACAAAGACGCCTCCAGCTTCTAGATACCG
EV549877       --> CAACCTCCGAGATAGACTTAAACAAAGACGCCTCCAGCTTCTAGATACCG
EW725079       --> CAACCTCCGAGATAGACTTAAACAAAGACGCCTCCAGCTCCTAGATACCG
EV550746       --> CAACCTCCGAGATAGACTTAAACAAAGACGCCTCCAGCTTCTAGATACCG
FY450141       --> CAACCTCCGAGATAGACTTAAACAAAGACGCCTCCAGCTTCTAGATACCG
FY452630       --> CAACCTCCGAGATAGACTTAAACAAAGACGCCTCCAGCTTCTAGATACCG
EY938503       --> CAACCTCCGAGATAGACTTAAACAAAGACGCCTCCAGCTCCTAGATACCG
FY436410       --> CAACCTCCGAGATAGACTTAAACAAAGACGCCTCCAGCTTCTAGATACCG

               351    -    401
UN21704        --> ATGTGGCCAAGTACTCGGTGGCTCAAGGTCGTTCTCCGGTGAAATTCGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV545263       <-- ..................................................
FY430118       <-- ..................................................
EX761488       <-- ..................................................
FD568007       <-- ..................................................
EV545977       <-- ..................................................
FD950095       --> ATGTGGCCAAGTACTCGGTTGCTCAAGGTCGTTCTCCGGTGAAATTCGGA
EV549877       --> ATGTGGCCAAGTACTCGGTGGCTCAAGGTCGTTCTCCGGTGAAATTCGGA
EW725079       --> ATGTGGCTAAGTACTCGGTGGCTCAAGGTCGTTCTCCGGTGAAATTCGGA
EV550746       --> ATGTGGCCAAGTACTCGGTGGCTCAAGGTCGTTCTCCGGTGAAATTCGGA
FY450141       --> ATGTGGCCAAGTACTCGGTGGCTCAAGGTCGTTCTCCGGTGAAATTCGGA
FY452630       --> ATGTGGCCAAGTACTCGGTGGCTCAAGGTCGTTCTCCGGTGAAATTCGGA
EY938503       --> ATGTGGCTAAGTACTCGGTGGCTCAAGGTCGTTCTCCGGTGAAATTCGGA
FY436410       --> ATGTGGCCAAGTACTCGGTGGCTCAAGGTCGTTCTCCGGTGAAATTCGGA

               401    -    451
UN21704        --> GCCACGGATCTGGTTTGTTGCCGTACTCTTCAGGGCCACACCGGAAAAGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV545263       <-- ..................................................
FY430118       <-- ..................................................
EX761488       <-- ..................................................
FD568007       <-- ..................................................
EV545977       <-- ..................................................
FD950095       --> GCCACGGATCTGGTTTGTTGCCGTACTCTTCAGGGCCACACCGGAAAAGT
EV549877       --> GCCACGGATCTGGTTTGTTGCCGTACTCTTCAGGGCCACACCGGAAAAGT
EW725079       --> GCCACGGATCTGGTTTGTTGCCGTACTCTTCAGGGCCACACCGGAAAAGT
EV550746       --> GCCACGGATCTGGTTTGTTGCCGTACTCTTCAGGGCCACACCGGAAAAGT
FY450141       --> GCCACGGATCTGGTTTGTTGCCGTACTCTTCAGGGCCACACCGGAAAAGT
FY452630       --> GCCACGGATCTGGTTTGTTGCCGTACTCTTCAGGGCCACACCGGAAAAGT
EY938503       --> GCCACGGATCTGGTTTGTTGCCGTACTCTTCAGGGCCACACCGGAAAAGT
FY436410       --> GCCACGGATCTGGTTTGTTGCCGTACTCTTCAGGGCCACACCGGAAAAGT

               451    -    501
UN21704        --> TTATTCGTTGGACTGGACGCCTGAGAGGAACCGGATTGTTAGTGCATCTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV545263       <-- ..................................................
FY430118       <-- ..................................................
EX761488       <-- ..................................................
FD568007       <-- ..................................................
EV545977       <-- ..................................................
FD950095       --> TTATTCGTTGGACTGGACGCCTGAAAGGAACCGGATTGTTAGTGCGTCTC
EV549877       --> TTATTCGTTGGACTGGACGCCTGAGAGGAACCGGATTGTTAGTGCATCTC
EW725079       --> TTATTCGTTGGACTGGACGCCTGAGAGGAACCGGATTGTTAGTGCATCTC
EV550746       --> TTATTCGTTGGACTGGACGCCTGAGAGGAACCGGATTGTTAGTGCATCTC
FY450141       --> TTATTCGTTGGACTGGACGCCTGAGAGGAACCGGATTGTTAGTGCATCTC
FY452630       --> TTATTCGTTGGACTGGACGCCTGAGAGGAACCGGATTGTTAGTGCATCTC
EY938503       --> TTATTCGTTGGACTGGACGCCTGAGAGGAACCGGATTGTTAGTGCATCTC
FY436410       --> TTATTCGTTGGACTGGACGCCTGAGAGGAACCGGATTGTTAGTGCATCTC

               501    -    551
UN21704        --> AAGATGGGAGGTTAATAGTGTGGAATGCTCTAACGAGTCAGAAAACTCAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV545263       <-- ..................................................
FY430118       <-- ..................................................
EX761488       <-- ..................................................
FD568007       <-- ..................................................
EV545977       <-- ..................................................
FD950095       --> AAGATGGGAGGTTAATCGTGTGGAATGCTCTAACGAGTCAGAAAACTCAT
EV549877       --> AAGATGGGAGGTTAATAGTGTGGAATGCTCTAACGAGTCAGAAAACTCAT
EW725079       --> AAGATGGGAGGTTAATAGTGTGGAATGCTCTAACGAGTCAGAAA-CTCAT
EV550746       --> AAGATGGGAGGTTAATAGTGTGGAATGCTCTAACGAGTCAGAAAACTCAT
FY450141       --> AAGATGGGAGGTTAATAGTGTGGAATGCTCTAACGAGTCAGAAAACTCAT
FY452630       --> AAGATGGGAGGTTAATAGTGTGGAATGCTCTAACGAGTCAGAAAACTCAT
EY938503       --> AAGATGGGAGGTTAATAGTGTGGAATGCTCTAACGAGTCAGAAAACTCAT
FY436410       --> AAGATGGGAGGTTAATAGTGTGGAATGCTCTAACGAGTCAGAAAACTCAT

               551    -    601
UN21704        --> GCTATTAAACTCCCTTGCGCGTGGGTTATGACCTGTGCCTTCTCTCCGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV545263       <-- ..................................................
FY430118       <-- ..................................................
EX761488       <-- ..................................................
FD568007       <-- ..................................................
EV545977       <-- ..................................................
FD950095       --> GCTATTAAACTCCCTTGTGCGTGGGTTATGACCTGTGCCTTCTCTCCGAA
EV549877       --> GCTATTAAACTCCCTTGCGCGTGGGTTATGACCTGTGCCTTCTCTCCGAA
EW725079       --> GCTATTAAACTCCCTTGCGCGTGGGTTATGACCTGTGCCTTCTCTCCGAA
EV550746       --> GCTATTAAACTCCCTTGCGCGTGGGTTATGACCTGTGCCTTCTCTCCGAA
FY450141       --> GCTATTAAACTCCCTTGCGCGTGGGTTATGACCTGTGCCTTCTCTCCGAA
FY452630       --> GCTATTAAACTCCCTTGCGCGTGGGTTATGACCTGTGCCTTCTCTCCGAA
EY938503       --> GCTATTAAGCTCCCTTGCGCGTGGGTTATGACCTGTGCCTTCTCTCCGAA
FY436410       --> GCTATTAAACTCCCTTGCGCGTGGGTTATGACCTGTGCCTTCTCTCCGAA

               601    -    651
UN21704        --> TGGTCAGACGGTTGCGTGTGGTGGGTTAGACAGTGTGTGTTCTATCTTTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV545263       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FY430118       <-- ..................................................  Raphanus sativus cv GSK3-1
EX761488       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD568007       <-- ..................................................  Raphanus sativus var. oleiformis
EV545977       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD950095       --> TGGCCAGACGGTTGCGTGTGGTGGGTTAGACAGTGTGTGTTCTATTTTTA  Raphanus sativus cv Early Scarlet Globe
EV549877       --> TGGTCAGACGGTTGCGTGTGGTGGGTTAGACAGTGTGTGTTCTATCTTTA  Raphanus raphanistrum subsp. raphanistrum (NY)
EW725079       --> TGGTCAGACGGTTGCGTGTGGTGGGTTAGACAGTGTGTGTTCTATCTTTA  Raphanus sativus cv Early Scarlet Globe
EV550746       --> TGGTCAGACGGTTGCGTGTGGTGGGTTAGACAGTGTGTGTTCTATCTTTA  Raphanus raphanistrum subsp. raphanistrum (NY)
FY450141       --> TGGCCAGACGGTTGCGTGTGGTGGGTTGGACAGTGTGTGTTCTATCTTTA  Raphanus sativus cv GSK3-1
FY452630       --> TGGCCAGACGGTTGCGTGTGGTGGGTTGGACAGTGTGTGTTCTATCTTTA  Raphanus sativus cv GSK3-1
EY938503       --> TGGTCAGACGGTTGCGTGTGGTGGGTTAGACAGTGTGTGTTCTATCTTTA  Raphanus sativus cv Early Scarlet Globe
FY436410       --> TGGCCAGACGGTTGCGTGTGGTGGGTTGGACAGTGTGTGTTCTATCTTTA  Raphanus sativus cv GSK3-1

               651    -    701
UN21704        --> GTCTTAGCTCGACTGCGGATAAGGACGGAACTGTGCCGGTTTCGAGGATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV545263       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FY430118       <-- ..................................................  Raphanus sativus cv GSK3-1
EX761488       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD568007       <-- ..................................................  Raphanus sativus var. oleiformis
EV545977       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD950095       --> GTCTTAGCTCGACTGCGGA...............................  Raphanus sativus cv Early Scarlet Globe
EV549877       --> GTCTTAGCTCGACCGCGGATAA............................  Raphanus raphanistrum subsp. raphanistrum (NY)
EW725079       --> GTCTTAGCTCGACCGCGGATA.............................  Raphanus sativus cv Early Scarlet Globe
EV550746       --> GTCTTAGCTCGACCGCGGATAAGGACGGAACTGTACCGGTTTCGAGGATG  Raphanus raphanistrum subsp. raphanistrum (NY)
FY450141       --> GTCTTAGCTCGACTGCGGATAAGGACGGAACTGTGCCGGTTTCGAGGATG  Raphanus sativus cv GSK3-1
FY452630       --> GTCTTAGCTCGACTGCGGATAAGGACGGAACTGTGCCGGTTTCGAGGATG  Raphanus sativus cv GSK3-1
EY938503       --> GTCTTAGCTCGACCGCGGATAAGGACGGAACTGTACCGGTTTCGAGGATG  Raphanus sativus cv Early Scarlet Globe
FY436410       --> GTCTTAGCTCGACTGCGGATAAGGACGGAACTGTGCCGGTTTCGAGGATG  Raphanus sativus cv GSK3-1

               701    -    751
UN21704        --> CTAAGTGGCCACAGGGGGTATGTTTCGTGCTGTCAGTATGTCCCAAATGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV545263       <-- .......................TTCGTGCTGTCAGTATGTCCCAAATGA  Raphanus raphanistrum subsp. raphanistrum (NY)
FY430118       <-- .............................CTGCCAGTATGTCCCAAATGA  Raphanus sativus cv GSK3-1
EX761488       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD568007       <-- ..................................................  Raphanus sativus var. oleiformis
EV545977       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD950095       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EV549877       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EW725079       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EV550746       --> CTAAGTGGCCACAGGGGGTATGTTTCGTGCTGTCAGTATGTCCCAAATGA  Raphanus raphanistrum subsp. raphanistrum (NY)
FY450141       --> CTAAGTGGCCACAGGGGGTATGTTTCGTGCTGCCAGTATGTCCCAAATGA  Raphanus sativus cv GSK3-1
FY452630       --> CTAAGTGGCCACAGGGGGTATGTTTCGTGCTGCCAGTATGTCCCAAATGA  Raphanus sativus cv GSK3-1
EY938503       --> CTAAGTGGCCACAGGGGGTATGTTTCGTGCTGTCAGTATGTCCCAAATGA  Raphanus sativus cv Early Scarlet Globe
FY436410       --> CTAAGTGGCCACAGGGGGTATGTTTCGTGCTGCCAGTATGTCCCAAATGA  Raphanus sativus cv GSK3-1

               751    -    801
UN21704        --> GGATGCTCATCTGATCACGAGTTCGGGTGATCAGACGTGTGTCTTATGGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV545263       <-- GGATGCTCATCTGATCACGAGTTCGGGTGATCAGACGTGTGTCTTATGGG
FY430118       <-- GGATGCTCATCTGATCACGAGTTCGGGTGATCAGACGTGTGTCTTATGGG
EX761488       <-- ..............TCACAAGTTCGGGTGATCAGACGTGTGTCTTATGGG
FD568007       <-- ..................................................
EV545977       <-- ..................................................
FD950095       --> ..................................................
EV549877       --> ..................................................
EW725079       --> ..................................................
EV550746       --> GGATGCTCATCTGATCACGAGTTCGGGTGATCAGACGTGTGTCTTATGGG
FY450141       --> GGATGCTCATCTGATCACGAGTTCGGGTGATCAGACGTGTGTCTTATGGG
FY452630       --> GGATGCTCATCTGATCACGAGTTCGGGTGATCAGACGTGTGTCTTATGGG
EY938503       --> GGATGCTCATCTGATCACGAGTTCGGGTGATCAGACGTGTGTCTTATGGG
FY436410       --> GGATGCTCATCTGATCACGAGTTCGGGTGATCAGACGTGTGTCTTATGGG

               801    -    851
UN21704        --> ATGTAACTACTGGCCTTAAAACTTCTGTTTTCGGTGGCGAGTTTCAGTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV545263       <-- ATGTAACTACTGGTCTTAAAACTTCTGTTTTTGGTGGAGAGTTTCAGTCT  Raphanus raphanistrum subsp. raphanistrum (NY)
FY430118       <-- ATGTAACTACTGGCCTTAAAACTTCTGTTTTCGGTGGCGAGTTTCAGTCT  Raphanus sativus cv GSK3-1
EX761488       <-- ATGTAACTACTGGCCTTAAAACTTCTGTTTTTGGTGGCGAATTTCAGTCT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD568007       <-- .................................GTGGCGAGTTTCAGTCT  Raphanus sativus var. oleiformis
EV545977       <-- ............................................CAGTCT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD950095       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EV549877       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EW725079       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EV550746       --> ATGTAACTACTGGTCTTAAAACTTCTGTTTTggt................  Raphanus raphanistrum subsp. raphanistrum (NY)
FY450141       --> ATGTAACTACTGGCCTTAAAACTTCTGTTTTCGGTGGCGAGTTTCAGTCT  Raphanus sativus cv GSK3-1
FY452630       --> ATGTAACTACTGGCCTTAAAACTTCTGTTTTCGGTGGCGAGTTTCAGTCT  Raphanus sativus cv GSK3-1
EY938503       --> ATGTAACTACTGGTCTTAAAACTTCTGTTTTTGGTGGAGAGTTTCAGTCT  Raphanus sativus cv Early Scarlet Globe
FY436410       --> ATGTAACTACTGGCCTTAAAACTTCTGTTTTCGGTGGCGAGTTTCAGTCT  Raphanus sativus cv GSK3-1

               851    -    901
UN21704        --> GGACATACTGCTGATGTACTAAGTGTCTCAATCAGTGGATCAAACCCAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV545263       <-- GGACATACTGCTGATGTACTAAGTGTCTCAATCAGTGGATCAAACCCAAA
FY430118       <-- GGACATACTGCTGATGTACTAAGTGTCTCAATCAGTGGATCAAACCCAAA
EX761488       <-- GGACATACTGCTGATGTACTGAGTGTCTCAATCAGCGGATCAAACCCTAA
FD568007       <-- GGACATACTGCTGATGTACTAAGTGTCTCAATCAGTGGATCAAACCCAAA
EV545977       <-- GGACATACTGCTGATGTACTAAGTGTCTCAATCAGTGGATCAAACCCAAA
FD950095       --> ..................................................
EV549877       --> ..................................................
EW725079       --> ..................................................
EV550746       --> ..................................................
FY450141       --> GGACATACTGCTGATGTACTAAGTGTCTCAATCAGTGGATCAAACCCAAA
FY452630       --> GGACATACTGCTGATGTACTAAGTGTCTCAATCAGTGGATCAAACCCAAA
EY938503       --> GGACATACTGCTGATGTACTAAGTGTCTCAATCAGTGGATCAAACCCAAA
FY436410       --> GGACATACTGCTGATGTACTAAGTGTCTCAATCAGTGGATCAAACCCAAA

               901    -    951
UN21704        --> CTGGTTCATATCTGGTTCATGCGATACCACTGCACGCTTGTGGGACACTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV545263       <-- CTGGTTCATATCTGGCTCATGCGATACCACTGCACGCTTGTGGGACACTC
FY430118       <-- CTGGTTCATATCTGGTTCATGCGATACCACTGCACGCTTGTGGGACACTC
EX761488       <-- CTGGTTCATATCTGGTTCATGTGACACCACTGCACGATTGTGGGACACTC
FD568007       <-- CTGGTTCATATCTGGTTCATGCGATACCACTGCACGCTTGTGGGACACTC
EV545977       <-- CTGGTTCATATCTGGCTCATGCGATACCACTGCACGCTTGTGGGACACTC
FD950095       --> ..................................................
EV549877       --> ..................................................
EW725079       --> ..................................................
EV550746       --> ..................................................
FY450141       --> CTGGTTCATATCTGGTTCATGCGATACCACTGCACGCTTGTGGGACACTC
FY452630       --> CTGGTTCATATCTGGTTCATGCGATACCACTGCACGCTTGTGGGACACTC
EY938503       --> CTGGTTCATATCTGGCTCATGCGATAC-ACTGCACGCTTGTGGGACACTC
FY436410       --> CTGGTTCATATCTGGTTCATGCGATACCACTGCACGCTTGTGGGACACTC

               951    -   1001
UN21704        --> GCGCTGCAAGCCGAGCGGTGCGGACGTTTCATGGGCACGAGGGAGATGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV545263       <-- GCGCTGCAAGCCGAGCGGTGCGGACGTTTCACGGGCACGAGGGAGATGTT
FY430118       <-- GCGCTGCAAGCCGAGCGGTGCGGACGTTTCATGGGCACGAGGGAGATGTT
EX761488       <-- GCGCTGCAAGCCGAGCGGTGCGGACGTTTCATGGGCACGAGGGAGATGTT
FD568007       <-- GCGCTGCAAGCCGAGCGGTGCGGACGTTTCATGGACACGAGGGAGATGTT
EV545977       <-- GCGCTGCAAGCCGAGCGGTGCGGACGTTTCACGGGCACGAGGGAGATGTT
FD950095       --> ..................................................
EV549877       --> ..................................................
EW725079       --> ..................................................
EV550746       --> ..................................................
FY450141       --> GCGCTG............................................
FY452630       --> GCGCTGCAAGCCG.....................................
EY938503       --> GCGCTGCAAGC-GAGCGGTGCGGACGTT......................
FY436410       --> GCGCTGCAAGCCGAGCGGTGCGGACGTTTCATGGGCACGAGGGAGATGTT

               1001   -   1051
UN21704        --> AATACCGTCAAGTTCTTTCCTGATGGGCAGAGATTTGGGACTGGATCAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV545263       <-- AACACCGTCAAGTTTTTTCCTGATGGGCAGAGATTTGGGACTGGATCAGA
FY430118       <-- AATACCGTCAAGTTCTTTCCTGATGGGCAAAGATTTGGGACTGGATCAGA
EX761488       <-- AATACCGTCAAGTTCTTTCCTGATGGGCATAGATTTGGGACTGGATCAGA
FD568007       <-- AATACCGTCAAGTTCTTTCCTGATGGGCAAAGATTTGGGACTGGATCAGA
EV545977       <-- AACACCGTCAAGTTTTTTCCTGATGGGCAGAGATTTGGGACTGGATCAGA
FD950095       --> ..................................................
EV549877       --> ..................................................
EW725079       --> ..................................................
EV550746       --> ..................................................
FY450141       --> ..................................................
FY452630       --> ..................................................
EY938503       --> ..................................................
FY436410       --> AATACCGTCAAGTTCTTTCCTGA...........................

               1051   -   1101
UN21704        --> CGACGGAACGTGCAGGTTGTATGACATTAGGACCGGTCATCAACTCCAGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV545263       <-- CGACGGAACGTGCAGGTTGTATGACATTAGGACCGGTCATCAACTCCAGG
FY430118       <-- CGATGGAACGTGCAGGTTGTATGACATTAGGACTGGTCATCAACTTCAGG
EX761488       <-- CGATGGAACGTGCAGGTTGTATGACATTAGGACCGGTCATCAACTCCAGG
FD568007       <-- CGACGGAACGTGCAGGTTGTATGACATTAGGACCGGTCATCAACTCCAGG
EV545977       <-- CGACGGAACGTGCAGGTTGTATGACATTAGGACCGGTCATCAACTCCAGG
FD950095       --> ..................................................
EV549877       --> ..................................................
EW725079       --> ..................................................
EV550746       --> ..................................................
FY450141       --> ..................................................
FY452630       --> ..................................................
EY938503       --> ..................................................
FY436410       --> ..................................................

               1101   -   1151
UN21704        --> TGTATCAGCCACATGGTGATGGTGAGAACGTACCTGTGACCTCCATTGCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV545263       <-- TGTATCAGCCACATGGTGATGGTGAGAACGTACCTGTGACCTCCATTGCA
FY430118       <-- TGTATCAGCCACATAGTGATGGTGAGAACGTACCTGTGACCTCCATTGCA
EX761488       <-- TGTATCAGCCGCAAGGGGATGGTGAGAACGTACCTGTGACTTCCATTGCA
FD568007       <-- TGTATCAGCCACAAGGGGATGGTGAGAACGTACCTGTGACCTCCATTGCA
EV545977       <-- TGTATCAGCCACATGGTGATGGTGAGAACGTACCTGTGACCTCCATTGCA
FD950095       --> ..................................................
EV549877       --> ..................................................
EW725079       --> ..................................................
EV550746       --> ..................................................
FY450141       --> ..................................................
FY452630       --> ..................................................
EY938503       --> ..................................................
FY436410       --> ..................................................

               1151   -   1201
UN21704        --> TTCTCTGCCTCGGGGAGACTTCTTTTCGCTGGATACGCGAACAACAACGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV545263       <-- TTCTCTGCCTCGGGGAGACTTCTTTTCGCTGGATACGCGAACAACAACGC
FY430118       <-- TTCTCTGCCTCGGGGAGACTTCTTTTCGCTGGATACGCGAACAACAACGC
EX761488       <-- TTCTCTGCCTCGGGGAGACTTCTTTTCGCTGGATACGCGAACAACAACGC
FD568007       <-- TTTTCTGCCTCGGGGAGACTTCTTTTCGCTGGATACGCGAACAACAACGC
EV545977       <-- TTCTCTGCCTCGGGGAGACTTCTTTTCGCTGGATACGCGAACAACAACGC
FD950095       --> ..................................................
EV549877       --> ..................................................
EW725079       --> ..................................................
EV550746       --> ..................................................
FY450141       --> ..................................................
FY452630       --> ..................................................
EY938503       --> ..................................................
FY436410       --> ..................................................

               1201   -   1251
UN21704        --> CTGCTACGTTTGGGATACTCTTTTGGGAGAAATTGTATTGGATTTAGGGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV545263       <-- CTGCTACGTTTGGGATACTCTTTTGGGAGAAATTGTATTGGATTTAGGGG
FY430118       <-- CTGCTACGTTTGGGATACTCTTTTGGGAGAAATTGTATTGGATTTAGGGG
EX761488       <-- CTGCTACGTTCGGGATACTCTTTTGGGAGAAGTTGTATTGGATTTAGGGG
FD568007       <-- CTGCTACGTTTGGGATACTCTTTTGGGAGAAATTGTATTGGATTTAGGGG
EV545977       <-- CTGCTACGTTTGGGATACTCTTTTGGGAGAAATTGTATTGGATTTAGGGG
FD950095       --> ..................................................
EV549877       --> ..................................................
EW725079       --> ..................................................
EV550746       --> ..................................................
FY450141       --> ..................................................
FY452630       --> ..................................................
EY938503       --> ..................................................
FY436410       --> ..................................................

               1251   -   1301
UN21704        --> AACTGCAGGATTCGCACAAGAATCGGATAAGCTGTTTGGGGATGTCAGCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV545263       <-- AACTGCAGGATTCGCACAAGAATCGGATAAGCTGTTTGGGGATGTCAGCA
FY430118       <-- AACTGCAGGATTCGCACAAGAATCGGATAAGCTGTTTGGGGATGTCAGCA
EX761488       <-- AACTGCAGGATTCGCACAAGAATCGGATAAGCTGTTTGGGGATGTCAGCA
FD568007       <-- AACTGCAGGATTCGCACAAGAATCGGATAAGCTGTTTGGGGATGTCAGCA
EV545977       <-- AACTGCAGGATTCGCACAAGAATCGGATAAGCTGTTTGGGGATGTCAGCA
FD950095       --> ..................................................
EV549877       --> ..................................................
EW725079       --> ..................................................
EV550746       --> ..................................................
FY450141       --> ..................................................
FY452630       --> ..................................................
EY938503       --> ..................................................
FY436410       --> ..................................................

               1301   -   1351
UN21704        --> GACGGAAGTGCCTTGTGTACAGGAAGCTGGGATTCAAATCTAAAGATATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV545263       <-- GACGGAAGTGCCTTGTGTACTGGAAGCTGGGATTCAAATCTAAAGATATG
FY430118       <-- GACGGAAGTGCCTTGTGTACAGGAAGCTGGGATTCAAATCTAAAGATATG
EX761488       <-- GACGGAAGTGCCTCGTGTACAGGAAGCTGGGATTCAAATCTAAAGATATG
FD568007       <-- GACGGAAGTGCCTTGTGTACAGGAAGCTGGGATTCAAATCTAAAGATATG
EV545977       <-- GACGGAAGTGCCTTGTGTACTGGAAGCTGGGATTCAAATCTAAAGATATG
FD950095       --> ..................................................
EV549877       --> ..................................................
EW725079       --> ..................................................
EV550746       --> ..................................................
FY450141       --> ..................................................
FY452630       --> ..................................................
EY938503       --> ..................................................
FY436410       --> ..................................................

               1351   -   1401
UN21704        --> GGCGTTTGGAGGGCACAGGAGAGTGATATGAAGAAGAGAAAACAAACATA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV545263       <-- GGCGTTTGGAGGGCCCAGGAGAGTGATATGAAGAAGAGAAAACAAACATA
FY430118       <-- GGCGTTTGGAGGGCACAGGAGAGTGATATGAAGAAGAGAAAACAAACATA
EX761488       <-- GGCGTTTGGAGGGCACAGGAGAGTGATATGAAGAAGAGAAAACAAACATA
FD568007       <-- GGCGTTTGGAGGGCACAGGAGAGTGATATGAAGAAGAGAAAACAAACATA
EV545977       <-- GGCGTTTGGAGGGCACAGGAGAGTGATATGAAGAAGAGAAAACAAACATA
FD950095       --> ..................................................
EV549877       --> ..................................................
EW725079       --> ..................................................
EV550746       --> ..................................................
FY450141       --> ..................................................
FY452630       --> ..................................................
EY938503       --> ..................................................
FY436410       --> ..................................................

               1401   -   1451
UN21704        --> GGAGTCGTGTCTCAGCTGTGTATCTCCAGTTCTTGTGGTTTTGGTTAAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV545263       <-- GGAGTCGTGTCTCAGCTGTGTATCTCCAGTTCTTGTGGTTTTGGTTAAAT
FY430118       <-- GGAGTCGTGTCTCAGCTGTGTATCTCCAGTTCTTGTGGTTTTGGTTAAAT
EX761488       <-- GGAGTCGTGTCTCAGCTG--TATCTCCAGTTCTTGTGGTTTTGGTTAA-T
FD568007       <-- GGAGTCGTGTCTCAGTTGTGTATCTCCAGTTCTTGCGGTTTTGGTTAAAT
EV545977       <-- GGAGTCGTGTCTCAGCTGTGTATCTCCAGTTCTTGTGGTTTTGGTTAAAT
FD950095       --> ..................................................
EV549877       --> ..................................................
EW725079       --> ..................................................
EV550746       --> ..................................................
FY450141       --> ..................................................
FY452630       --> ..................................................
EY938503       --> ..................................................
FY436410       --> ..................................................

               1451   -   1501
UN21704        --> ATATTCTGTACTCTTTTGTTTGTAATCTGTGTGAAAAAAA-TGGGGATGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV545263       <-- ATATTCTGTACTCTTTTGTTTGTAATCTGTGTGAAAAAAA-TGGGGATGG
FY430118       <-- ATATTCTGTACTCTTTTGTTTGTAATCTGTGTGGAAAAAA-TGGGGATGG
EX761488       <-- ATAT-CTGTACTCTTTTGTTTGTAATCTGTGTGAAAAAAA-TGGGGATGG
FD568007       <-- ATATTCTGTACTCTTTTGTTTGTAATCTGTGTGAAAAAAAATGGGGATGG
EV545977       <-- ATATTCTGTACTCTTTTGTTTGTAATCTGTGTGAAAAAAA-TGGGGATGG
FD950095       --> ..................................................
EV549877       --> ..................................................
EW725079       --> ..................................................
EV550746       --> ..................................................
FY450141       --> ..................................................
FY452630       --> ..................................................
EY938503       --> ..................................................
FY436410       --> ..................................................

               1501   -   1551
UN21704        --> GGAAGGTGTGTGTTACTTTTGAATAGTGGAATAGAGGATCAAAACTTCTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV545263       <-- GGAAGGTGTGTGTTACTTTTGAATAGTGGAATAGAGGATCAAAACTTCTC
FY430118       <-- GGAAGGTGTGTGTTACTTTTGAATAGTGGAATAGAGGATCAAAACTTCTC
EX761488       <-- GGAAGGTGTGTGTTACTTTTGAATAGTGGAATAGAGGATC..........
FD568007       <-- GGAAGGTGTGTGTTACTTTTGAATAGTGGAATAGAGGATCAAAACTTCTC
EV545977       <-- GGAAGGTGTGTGTTACTTTTGAATAGTGGAATAGAGGATCAAAACTTCTC
FD950095       --> ..................................................
EV549877       --> ..................................................
EW725079       --> ..................................................
EV550746       --> ..................................................
FY450141       --> ..................................................
FY452630       --> ..................................................
EY938503       --> ..................................................
FY436410       --> ..................................................

               1551   -   1601
UN21704        --> TAGTTTACCAGTGTGCGTTTGATTTATTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV545263       <-- TAGTTTACCAGTGTGCGTTTGATTTATTT
FY430118       <-- T............................
EX761488       <-- .............................
FD568007       <-- TAGTTT.......................
EV545977       <-- TAGTTTACCAGTGTGCGTTTGATTTATTT
FD950095       --> .............................
EV549877       --> .............................
EW725079       --> .............................
EV550746       --> .............................
FY450141       --> .............................
FY452630       --> .............................
EY938503       --> .............................
FY436410       --> .............................