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Alignment for radish unigene UN21712

               1      -     51
UN21712        --> GCACCTCCAGAGGGTCGTCTTCCTGATGCTACAAAGGGTTGTAACCACTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX768443       <-- ..................................................
FD552681       <-- ..................................................
EY895519       <-- ..................................................
FD563637       --> GCACCTCCAGAGGGTCGTCTTCCTGATGCTACAAAGGGTTGTAACCACTT
FD941963       --> GCACCTCCAGAGGGTCGTCTTCCTGATGCTACAAAGGGTTGTAACCACTT
EY899819       --> ..................................................
EX764547       --> ..................................................
EV528161       --> ..................................................
EV528166       --> ..................................................
FD556353       --> ..................................................

               51     -    101
UN21712        --> GAGAGAAGTCTTTGCAAAGCAGATGGGTTTGACTGACAATGACATCGTGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX768443       <-- ..................................................
FD552681       <-- ..................................................
EY895519       <-- ..................................................
FD563637       --> GAGAGAAGTCTTTGCAAAGCAGATGGGTTTGACTGACAATGACATCGTGG
FD941963       --> GAGAGAAGTCTTTGCAAAGCAGATGGGTTTGACTGACAATGACATCGTGG
EY899819       --> ..................................................
EX764547       --> ..................................................
EV528161       --> ..................................................
EV528166       --> ..................................................
FD556353       --> ..................................................

               101    -    151
UN21712        --> CTTTATCTGGTGCCCACACTCTGCGTTGATACCACTGCTTACGGCCGGGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX768443       <-- ..................................................
FD552681       <-- ..................................................
EY895519       <-- ..................................................
FD563637       --> CTTTATCTGGTGCCCACACTCTGCGTTGATACCACTGCTTACGGCCGGGG
FD941963       --> CTTTATCTGGTGCCCACACTCTGCGTTGATACCACTGCTTACGGCCGGGG
EY899819       --> ..................................................
EX764547       --> ..................................................
EV528161       --> ..................................................
EV528166       --> ..................................................
FD556353       --> ..................................................

               151    -    201
UN21712        --> GCTTTTTCTTTGATTCAGAATCTGTTCTTTAGATTACAGTTCTTCAAGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX768443       <-- ..................................................
FD552681       <-- ..................................................
EY895519       <-- ..................................................
FD563637       --> GCTTTTTCTTTGATTCAGAATCTGTTCTTTAGATTACAGTTCTTCAAGAA
FD941963       --> GCTTTTTCTTTGATTCAGAATCTGTTCTTTAGATTACAGTTCTTCAAGAA
EY899819       --> .........ggGATTCAGAATCTGTTCTTTAGATTACAGTTCTTCAAGAA
EX764547       --> ..............ggAGAATCTGTTCTTTAGATTACAGTTCTTCAAGAA
EV528161       --> ............................ggAGATTACAGTTCATCAAGAA
EV528166       --> ..................................................
FD556353       --> ..................................................

               201    -    251
UN21712        --> CTGAATTGGTGGAAAGCTAAAACTGATCTTCTTCGGCAGCAAACGCGTAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX768443       <-- ..................................................
FD552681       <-- ..................................................
EY895519       <-- ..................................................
FD563637       --> CTGAATTGGTGGAAAGCTAAAACTGATCTTCTTCGGCAGCAAACGCGTAT
FD941963       --> CTGAATTGGTGGAAAGCTAAAACTGATCTTCTTCGGCAGCAAACGCGTAT
EY899819       --> CTGAATTGGTGGAAAGCTAAAACTGATCCTCTTCGGCAGCAAACGCGTAT
EX764547       --> CTGAATTGGTGGAAAGCTAAAACTGATCTTCTTCGGCAGCAAACGCGTAT
EV528161       --> CTGAATTGCTGGAAAGCTAAAACTGATCTTCTTCGTCAGCAAACGCGTAT
EV528166       --> ..............................CTTCGTCAGCAAACGCGTAT
FD556353       --> ..................................................

               251    -    301
UN21712        --> AGATATAGAGTATCAAGACAACTCCAGTGTCGGCATGGCAAACACTTGGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX768443       <-- ..................................................
FD552681       <-- ..................................................
EY895519       <-- ..................................................
FD563637       --> AGATATAGAGTATCAAGACAACTCCAGTGTCGGCATGGCAAACACTTGGG
FD941963       --> AGATATAGAGTATCAAGACAACTCCAGTGTCGGCATGGCAAACACTTGGG
EY899819       --> AGATATAGAGTATCAAGACAACTCTAGTGTCGGCATGGCAAACACTTGGG
EX764547       --> AGATATAGAGTATCAAGACAACTCTAGTGTCGGCATGGCAAACACTTGGG
EV528161       --> AGATATAGAGTATCAAGACAACTCCAGTGGCGCCATGGCAAACACTTGGG
EV528166       --> AGATATAGAGTATCAAGACAACTCCAGTGGCGCCATGGCAAACACTTGGG
FD556353       --> .................ggAACTCCAGTGTCGGCATGGAAAACACTTGGG

               301    -    351
UN21712        --> GTGACGACAAGATCCTCAGCTACAACGATGTTGTCCTCAGGAGATCAGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX768443       <-- ..................................................
FD552681       <-- ..................................................
EY895519       <-- ..................................................
FD563637       --> GTGACGACAAGATCCTCAGCTACAACGATGTTGT--TCAGGAGATCAGAT
FD941963       --> GTGACGACAAGATCCTCAGCTACAACGATGTTGT--TCAGGAGATCAGAT
EY899819       --> GTGACGACATGATCCTCAGCTACAACGATGTTGTCCTCAGGAGATCAGAT
EX764547       --> GTGACGACATGATCCTCAGCTACAACGATGTTGTCCTCAGGAGATCAGAT
EV528161       --> GTGACGACAAGATCCTCAGCTACAACGATGTTGTCCTCAGGAGATCAGAT
EV528166       --> GTGACGACAAGATCCTCAGCTACAACGATGTTGTCCTCAGGAGATCAGAT
FD556353       --> GTGACGACAAGATCCTCAGCTACAACGATGTTGTCCTCAGGAGATCAGAT

               351    -    401
UN21712        --> CTAGACATCCTTAACGGACCCAATTTTCTAAACGACCGTATCATCGAGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX768443       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD552681       <-- ..................................................  Raphanus raphanistrum subsp. landra
EY895519       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD563637       --> CTTGACATCCTTAACGGTCCCAATTTTCTAAACGACCGTGTAATCGAGTT  Raphanus sativus var. oleiformis
FD941963       --> CTTGACATCCTTAACGGTCCCAATTTTCTAAACGACCGTGTAATCGAGTT  Raphanus sativus var. oleiformis
EY899819       --> CTAGACATCCTTAACGGACCCAATTCTCTAAACGACCGTATCATCGAGTT  Raphanus raphanistrum subsp. maritimus
EX764547       --> CTAGACATCCTTAACGGACCCAATTTTCTAAACGACCGTATCATCGAGTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EV528161       --> CTAGACATCCTTAACGGACCCAATTTTCTAAACGACCGTATCATCGAGTT  Raphanus raphanistrum subsp. maritimus
EV528166       --> CTAGACATCCTTAACGGACCCAATTTTCTAAACGACCGTATCATCGAGTT  Raphanus raphanistrum subsp. maritimus
FD556353       --> TTGGACATCCTTAACGGACCCAATTTTCTAAACGACCGTGTCATCGAATT  Raphanus raphanistrum subsp. landra

               401    -    451
UN21712        --> CTACCTAAGCTACTTATCCACACTCCACACTTCCCCTACCATCTCGCTAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX768443       <-- ..................................CCTACCATCTCGCTAA
FD552681       <-- ..................................................
EY895519       <-- ..................................................
FD563637       --> CTACCTAAGCTACTTATCCACACTCCACACTTCCCCTACCATCTCGCTAA
FD941963       --> CTACCTAAGCTACTTATCCACACTCCACACTTCCCCTACCATCTCGCTAA
EY899819       --> CTACCTAAGCTACTTATCCACACTCCACCCTTCCCCTACCATCTCGCTAA
EX764547       --> CTACCTAAGCTACTTATCCACACTCCACACTTCCCCTACCATCTCGCTAA
EV528161       --> CTACCTAAGCTACTTATCCACACTCCACACTTCCCCTACCATCTCGCTAA
EV528166       --> CTACCTAAGCTACTTATCCACACTCCACACTTCCCCTACCATCTCGCTAA
FD556353       --> CTACCTAAGCTACTTATCCACACTCCACACTTCCCCTACCATCTCACTAA

               451    -    501
UN21712        --> TCCCTCCCTCCATCGCCTTCTGGATCTCAAACTGTCCCGACGCTGAATCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX768443       <-- TCCCTCCCTCCATCGCCTTCTGGATCTCAAACTGTCCCGACGCTGAATCA
FD552681       <-- ......................GATCTCAAACTGTCCCGACGCTGAATCA
EY895519       <-- .......................ATCTCAAACTGTCCCGACGCTGAATCA
FD563637       --> TCCCTCCCTCCATCGCCTTCTGGATCTCAGACTGTCCCGACGCTGAATCA
FD941963       --> TCCCTCCCTCCATCGCCTTCTGGATCTCAGACTGTCCCGACGCTGAATCA
EY899819       --> T.................................................
EX764547       --> TCCCTCCCTCCATCGCCTTCTGGATCTCAAACTGTCCCGACGCTGAATCA
EV528161       --> TCCCTCCCTCCATCGCCTTCTGTATCTCAAACTATCCCGACGCTGAATCA
EV528166       --> TCCCTCCCTCCATCGCCTTCTGTATCTCAAACTATCCCGACGCTGAATCA
FD556353       --> TCCCTCCCTCCATCGCCTTCTGGATCTCAAACTGTCCCGACGCTGAATCA

               501    -    551
UN21712        --> CTCAAAGACTTCATGAAACCCCTTAGGTTACTCGACAGCGAGCTCGTGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX768443       <-- CTCAAAGACTTCATGAAACCCCTTAGGTTACTCGACAGCGAGCTCGTGAT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD552681       <-- CTCAAAGACTTCATGAAACCCCTTAGGCTACTCGACAGCGAGCTCGTGAT  Raphanus raphanistrum subsp. landra
EY895519       <-- CTCAAAGACTTCATGAAACCCCTTAGGTTACTCGACAGCGAGCTCGTGAT  Raphanus raphanistrum subsp. maritimus
FD563637       --> CTCAAAGACTTCATGAAACCCCTTAGGCTACTCGACAGCGAGCTCGTGAT  Raphanus sativus var. oleiformis
FD941963       --> CTCAAAGACTTCATGAAACCCCTTAGGCTACTCGACAGCGAGCTCGTGAT  Raphanus sativus var. oleiformis
EY899819       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EX764547       --> CTCAAAGACTTCATGAAACCCCTTAGGTTACTCGACAGCGAGCTCGTGAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EV528161       --> CTCAAGGACTTCATGAAACCCCTTAGGTTACTCGACAGCGAGCTCGTGGT  Raphanus raphanistrum subsp. maritimus
EV528166       --> CTCAAGGACTTCATGAAACCCCTTAGGTTACTCGACAGCGAGCTCGTGGT  Raphanus raphanistrum subsp. maritimus
FD556353       --> CTCAAAGACTTCATGAAACCCCTTAGGCTACTCGACAGCGAGCTCGTGAT  Raphanus raphanistrum subsp. landra

               551    -    601
UN21712        --> ATTGCCTGTAAACGACAACCTCAATGTCGAGCTAGCAGAAGGCGGGTTAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX768443       <-- ATTGCCTGTAAACGACAACCTCAATGTCGAGCTAGCAGAAGGCGGGTTAC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD552681       <-- ATTGCCTGTAAACGACAACCTCAATGTCGAGCTAGCTGAAGGCGGGTTAC  Raphanus raphanistrum subsp. landra
EY895519       <-- ATTGCCTGTAAACGACAACCTCAATGTCGAGCTAGCAGAAGGCGGGTTAC  Raphanus raphanistrum subsp. maritimus
FD563637       --> ATTACCTGTAAACGACAACCTCAATGTCGAGATAGCAGAAGGCGGGTTAC  Raphanus sativus var. oleiformis
FD941963       --> ATTACCTGTAAACGACAACCTCAATGTCGAGATAGCAGAAGGCGGGTTAC  Raphanus sativus var. oleiformis
EY899819       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EX764547       --> ATTGCCTGTAAACGACAACCTCAATGTCGAGCTAGCAGAAGGCGGGTTAC  Raphanus raphanistrum subsp. raphanistrum (NY)
EV528161       --> ATTGCCTGTAAACGACAACCTCAATGTCGAGCTAGCTGAAGGCGGGTTAC  Raphanus raphanistrum subsp. maritimus
EV528166       --> ATTGCCTGTAAACGACAACCTCAATGTCGAGCTAGCTGAAGGCGGGTTAC  Raphanus raphanistrum subsp. maritimus
FD556353       --> ATTGCCTGTAAACGACAACCTCAATGTCGAGCTAGCTGAAGGCGGGTTAC  Raphanus raphanistrum subsp. landra

               601    -    651
UN21712        --> ACTGGAGCTTACTCGTGTACTACAAAGAAGCCAACTCGTTTTTCCATCAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX768443       <-- ACTGGAGCTTACTCGTGTACTACAGAGAAGCCAACTCGTTTTTCCATCAC
FD552681       <-- ACTGGAGCTTACTCGTGTACTACAAAGAAGCCAACTCGTTTTTCCATCAC
EY895519       <-- ACTGGAGCTTACTCGTGTACTACAGAGAAGCCAACTCGTTTTTCCATCAC
FD563637       --> ACTGGAGCTTACTCGTGTACTACAAAGAAGCCAACTCGTTTTTCCATCAC
FD941963       --> ACTGGAGCTTACTCGTGTACTACAAAGAAGCCAACTCGTTTTTCCATCAC
EY899819       --> ..................................................
EX764547       --> ACTGGAGCTTACTCGTGTACTACAGAGAAGCCAACTCGTTTTTCCATCAC
EV528161       --> ACTGGAGCTTACTCGTGTACTACAAAGAAGCCAACACGTTTTTTCATCAC
EV528166       --> ACTGGAGCTTACTCGTGTACTACAAAGAAGCCAACACGTTTTTCCATCAC
FD556353       --> ACTGGAGCTTACTCGTGTACTACAAAGAAGCCAACTCGTTTTTCCATCAC

               651    -    701
UN21712        --> GATAGCTTTATGGGGTCGAATCGATGGAATGCGAGACAGCTCTACAAGGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX768443       <-- GATAGCTTTATGGGGTCGAATCGATGGAATGCGAGACAGCTCTACAAGGC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD552681       <-- GATAGCTTTATGGGGTCGAATCGATGGAATGCGAGACAGCTCTACAGGGC  Raphanus raphanistrum subsp. landra
EY895519       <-- GATAGCTTTATGGGGTCGAATCGATGGAATGCGAGACAGCTCTACAAGGC  Raphanus raphanistrum subsp. maritimus
FD563637       --> GATAGCTTTATGGGATCGAATCGATGGAATGCGAGACAGCTCTACAAGGC  Raphanus sativus var. oleiformis
FD941963       --> GATAGCTTTATGGGATCGAATCGATGGAATGCGAGACAGCTCTACAAG-C  Raphanus sativus var. oleiformis
EY899819       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EX764547       --> GATAGCTTTATGGGGTCGAATCGATGGAATGCGAGACAGCTCTACAAGGC  Raphanus raphanistrum subsp. raphanistrum (NY)
EV528161       --> GATAGCTTTATGGGGTCGAATCGATGGAATGCGAGACAGCTCTACAGGGC  Raphanus raphanistrum subsp. maritimus
EV528166       --> GATAGCTTTATGGGGTCGAATCGATGGAATGCGAGACAGCTCTACAGGGC  Raphanus raphanistrum subsp. maritimus
FD556353       --> GATAGCTTTATGGGGTCGAATCGATGGAATGCGAGACAGCTCTACAGGGC  Raphanus raphanistrum subsp. landra

               701    -    751
UN21712        --> GGTTTCTCCATTTGTGTCTGATGGAGATGCTGCGTATAGAGAATGCAGTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX768443       <-- GGTTTCTCCATTTGTGTTTGATGGAGATGCTGCGTATAGAGAATGCAGTG
FD552681       <-- GGTTTCTCCATT-GTGTCTGATGGAGATGCTGCGTATAGAGAATGCAGTG
EY895519       <-- GGTTTCTCCATTTGTGTTTGATGGAGATGCTGCGTATAGAGAATGCAGTG
FD563637       --> GGTTTCTCCATTTGTGTCTGATGGAGATGCTGCGTATAGAGA........
FD941963       --> GGTTTCTCCATTTGTGTCTGATGGAGATGCTGCGTATAGAGAATGCAGTG
EY899819       --> ..................................................
EX764547       --> GGTTTCTCCATTTGTGTCTGATGGAGATGCTGCGTATAGAGAATGCAGTG
EV528161       --> GGTTTCTCCATTTGTGTCTGATGGAGATGCTGCGTATAGAGAATGCAGTG
EV528166       --> GGTTTCTCCATTTGTGTCTGATGGAGATGCTGCGTATAGAGAATGCAGTG
FD556353       --> GGTTTCTCCATT-GTGTCTGATGGAGATGCTGCGTATAGAGAATGCAGTG

               751    -    801
UN21712        --> ATTCACCGCAGCAGAAGAATGGGTACGACTGTGGTGTGTACCTTCTCGCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX768443       <-- ATTCACCGCAGCAGAAGAATGGGTACGACTGTGGTGTGTACCTTCTTGCA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD552681       <-- ATACACCGCAGCAGAAGAATGGGTACGACTGTGGTGTGTACCTTCTCGCA  Raphanus raphanistrum subsp. landra
EY895519       <-- ATTCACCGCAGCAGAAGAATGGGTACGACTGTGGTGTGTACCTTCTTGCA  Raphanus raphanistrum subsp. maritimus
FD563637       --> ..................................................  Raphanus sativus var. oleiformis
FD941963       --> ATTCACCGCAGCAGA-GAATGGGTACGACT....................  Raphanus sativus var. oleiformis
EY899819       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EX764547       --> ATTCACCGCAGCAGAAGAATGGGTACGACTGTGGTGTGTACCTTCTTGCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV528161       --> ATACACCGCAGCAGAAGAATGGGTACGACTGTGGTGTGTACCTTCTCGCA  Raphanus raphanistrum subsp. maritimus
EV528166       --> ATACACCGCAGCAGAAGAATGGGTACGACTGTGGTGTGTACCTTCTCGCA  Raphanus raphanistrum subsp. maritimus
FD556353       --> ATACACCGCAGCAGAAGAATGGGTACGACTGTGGTGTGTACCTTCTCGCA  Raphanus raphanistrum subsp. landra

               801    -    851
UN21712        --> AACGCTCAGGTTATATGCAAATGGTTTAGCTCTGATGGAGTGAAGAACCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX768443       <-- AACGCTCAGGTTATATGCAAATGGTTTAGCTCTGATGGAGTGAAGAACCG
FD552681       <-- AACGCTCAGGTTATATGCAAATGGTTTAGCTCTGATGGAGTGAAGAACCG
EY895519       <-- AACGCTCAGGTTATATGCAAATGGTTTAGCTCTGATGGAGTGAAGAACCG
FD563637       --> ..................................................
FD941963       --> ..................................................
EY899819       --> ..................................................
EX764547       --> AACGCTCAG-TTATATGCAAATGGTTTAGCTCTGATGGAGTGAAGAACCG
EV528161       --> AACGCTCAGGTTATATGCAAATGGTTTAGCTCTGATGGAGTGAAGAACCG
EV528166       --> AACGCTCAGGTTATATGCAAATGGTTTAGCTCTGATGGAGTGAAGAACCG
FD556353       --> AACGCTCAGGTTATATGCAAATGGTTTAGCTCTGATGGAGTGAAGAACCG

               851    -    901
UN21712        --> GGATGAGCTTTGGTTAGGTGATGTGAAGGAGACTGTACCGGATGTGGCTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX768443       <-- GGATGAGCTTTGGTTAGGTGATGTGAAGGAGACTGTACCGGATGTGGCTA
FD552681       <-- GGATGAGCTTTGGTTAGGTGATGTGAAGGAGACTGTACCGGATGTGGCTA
EY895519       <-- GGATGAGCTTTGGTTAGGTGATGTGAAGGAGACTGTACCGGATGTGGCTA
FD563637       --> ..................................................
FD941963       --> ..................................................
EY899819       --> ..................................................
EX764547       --> GGATGAGCTTTGGTTAG-TGATGTGAAG-AGACTGTACCGGATGTGGCTA
EV528161       --> GGATGAGCTTTGGTTAGGTGATGTGAAGGAGACTGTACCGGATGTGGCTA
EV528166       --> GGATGAGCTTTGGTTAGGTGATGTGAAGGAGACTGTACCGGATGTGGCTA
FD556353       --> GGATGAGCTTTGGTTAGGTGATGTGAAAGAGACTGTACCGGATGTGGCTA

               901    -    951
UN21712        --> ACCATTTGCGAGAAGAGATATTGGGGTTGATCAAAAGGTTGATGTCTGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX768443       <-- ACCATTTGCGAGAAGAGATATTGGGGTTGATCAAAAGGTTGATGTTTGAG
FD552681       <-- ACCATTTGCGAGAAGAGATATTGGGGTTGATCAAAAGGTTGATGTCTGAG
EY895519       <-- ACCATTTGCGAGAATAGATATTGGGGTTGATCAAAAGGTTGATGTCTGAG
FD563637       --> ..................................................
FD941963       --> ..................................................
EY899819       --> ..................................................
EX764547       --> AC-ATTTGCGAGA-GAGATA..............................
EV528161       --> ACCATTTGCGAGAAGAGATATTGGGGTTGATCA.................
EV528166       --> ACCATTTGCGAGAAGAGATATTGGGGTTGATCAAAAGGTTGATGTCTGAG
FD556353       --> ACCATTTGCGAGAAGAGATATTGGGGTTGATCAAAACGTTGATGTCTGAG

               951    -   1001
UN21712        --> AAGAGTGTGAGTAAATGAGAGATGCTTGTTGAAGACTTTTTTTGTAACTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX768443       <-- AAGAGTGTGAGTAAATGAGAGATGCTTGTTGAAGACTTTTTTTGTAACTT
FD552681       <-- AAGAGTGTGAGTAAATGAGAGATGCTTGTTGAAGACTTTTTTTGTAACTT
EY895519       <-- AAGAGTGTGAGTAAATGAGAGATGCTTGTTGAGGACTTTTTTTGTAACTT
FD563637       --> ..................................................
FD941963       --> ..................................................
EY899819       --> ..................................................
EX764547       --> ..................................................
EV528161       --> ..................................................
EV528166       --> AAGAGTGTGAGTAAATGAGAGATGCTTGTTGAAGACTTTTT--GTAACTT
FD556353       --> A-GAGTGTGAGTAA-TGAGAGATGCTTGTTGAAGACTTTTTTTGTA....

               1001   -   1051
UN21712        --> TTTACCGGATCTAATACATTTGATATTTTCACCTGTTATTGTTGTACTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX768443       <-- TTTACCGGATTTAATACATTTGATATTTTCACCTGTTATTGTTGTACTTT
FD552681       <-- TTTACCGGATCTAATACATTTGATATTTTCACCTGTTATTGTTGTACTTT
EY895519       <-- TTTACCGGATCTAATACATTTGATATTTTCACCTGTTATTGTTGTACTTT
FD563637       --> ..................................................
FD941963       --> ..................................................
EY899819       --> ..................................................
EX764547       --> ..................................................
EV528161       --> ..................................................
EV528166       --> TTTACCGGATCTA-TACATTTGATATTTTCACC.................
FD556353       --> ..................................................

               1051   -   1101
UN21712        --> TAAGTGTAACTTGAAATCGATAACGAGTGCTTTGTGAATGTGATCAATTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX768443       <-- TAAGTGTAACTTG.....................................
FD552681       <-- TAAGTGTAACTTGAAATCGATAACGAGTGCTTTGTGAATGTGATCAATTG
EY895519       <-- TAAGTGTAACTTGAAATCGATAACGAGTGCTTTGTG..............
FD563637       --> ..................................................
FD941963       --> ..................................................
EY899819       --> ..................................................
EX764547       --> ..................................................
EV528161       --> ..................................................
EV528166       --> ..................................................
FD556353       --> ..................................................

               1101   -   1151
UN21712        --> GTAAATAAAATAAAATATCCGCCGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~
EX768443       <-- .........................
FD552681       <-- GTAAATAAAATAAAATATCCGCCGT
EY895519       <-- .........................
FD563637       --> .........................
FD941963       --> .........................
EY899819       --> .........................
EX764547       --> .........................
EV528161       --> .........................
EV528166       --> .........................
FD556353       --> .........................