1      -     51
UN21727        --> GGGAGGTTTCTTACAATTTAGGACCAAAGAACCTCTCAACACACAGTGGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX766328       <-- ..............AATTTAGGACCAAAGAACCTCTCAACACACAGTGGT
EX768893       <-- ..................................................
EY944336       <-- ..................................................
EV529443       <-- ..................................................
EV573076       <-- ..................................................
EY917528       <-- ..................................................
EX761951       --> GGGAGGTTTCTTACAATTTAGGACCAAAGAACCTCTCAACACACAGTGGT
EX765086       --> .GGAGGTTTCTTACAATTTAGGACCAAAGAACCTCTCAACACACAGTGGT
EV524448       --> ..................................................
EY948677       --> ..................................................
EV568320       --> ..................................................
EY921371       --> ..................................................

               51     -    101
UN21727        --> CGAAGAAGAAGAAGAAGACGAGAGAGGAAGTAAGATCACGAAGCCACTGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX766328       <-- CGAAGAAGAAGAAGAAGACGAGAGAGGAAGTAAGATCACGAAGCCACTGA
EX768893       <-- .................ACGAGAGAGGAAGTAAGATCACGAAGCCACTGA
EY944336       <-- ......................gGAGGAAGGAAGATCAC-AAG-CTCTGA
EV529443       <-- ................................................GA
EV573076       <-- ..................................................
EY917528       <-- ..................................................
EX761951       --> CGAAGAAGAAGAAGAAGACGAGAGAGGAAGTAAGATCACGAAGCCACTGA
EX765086       --> CGAAGAAGAAGAAGAAGACGAGAGAGGAAGTAAGATCACGAAGCCACTGA
EV524448       --> ............gGAAGACGAGAGAGGAAGGAAGATCAC-AAGCT-CTGA
EY948677       --> .....................ggGAGGAAGGAAGATCAC-AAG-CTCTGA
EV568320       --> .......................................ggaagctCTGA
EY921371       --> .......................................ggaagctCTGA

               101    -    151
UN21727        --> TAAGTCATGCGAACCTTTGCTGCTCGCCTCGCTAACCATTTTCGGAGAGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX766328       <-- TAAGTCATGCGAATCTTTGCTGCTCGCCTCGCTAATCATTTTCGCAGAGG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX768893       <-- TAAGTCATGCGAATCTTTGCTGCTCGCCTCGCTAATCATTTTCGCAGAGG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY944336       <-- TAAGTCATGCGAAC-TTTGCTGCTCGCCTCGCTAACCATTTTCGGAGAGG  Raphanus sativus cv Rat-Tail Radish #3870
EV529443       <-- TAAGTCATGCGAACCTTTGCTGCTCGCCTCGCTAACCATTTTCGGAGAGG  Raphanus raphanistrum subsp. maritimus
EV573076       <-- .............CCTTTGCTGCTCGCCTCGCTAACCATTTTCGGAGAGG  Raphanus raphanistrum subsp. landra
EY917528       <-- ...................CTGCTCGCCTCGCTAACCATTTTCGGAGAGG  Raphanus raphanistrum subsp. landra
EX761951       --> TAAGTCATGCGAATCTTTGCTGCTCGCCTCGCTAATCATTTTCGCAGAGG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX765086       --> TAAGTCATGCGAATCTTTGCTGCTCGCCTCGCTAATCATTTTCGCAGAGG  Raphanus raphanistrum subsp. raphanistrum (NY)
EV524448       --> TAAGTCATGCGAACCTTTGCTGCTCGCCTCGCTAACCATTTTCGGAGAGG  Raphanus raphanistrum subsp. maritimus
EY948677       --> TAAGTCATGCGAACCTTTGCTGCTCGCCTCGCTAACCATTTTCGGAGAGG  Raphanus sativus cv Rat-Tail Radish #3870
EV568320       --> TAAGTCATGCGAACCTTTGCTGCTCGCCTCGCTAACCATTTTCGGAGAGG  Raphanus raphanistrum subsp. landra
EY921371       --> TAAGTCATGCGAACCTTTGCTGCTCGCCTCGCTAACCATTTTCGGAGAGG  Raphanus raphanistrum subsp. landra

               151    -    201
UN21727        --> GAGAAATGGGTATCCTCGATCTCGGAACTTCTCCTCGTTGACCAAGAAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX766328       <-- TAGAAATGGGTATCCTCCATCTCGAGACTTCTCCTCGTTGACCAAGAAAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX768893       <-- TAGAAATGGGTATCCTCCATCTCGAAACTTCTCCTCGTTGACCAAGAAAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY944336       <-- GAGAAATGGGTATCCTCGATCTCGGAACTTCTCCTCGTTGACCAAGAAAG  Raphanus sativus cv Rat-Tail Radish #3870
EV529443       <-- GAGAAATGGGTATCCTCGATCTCGGAACTTCTCCTCGTTGACCAAGAAAG  Raphanus raphanistrum subsp. maritimus
EV573076       <-- GAGAAATGGGTATCCTCGATCTCGGAACTTCTCCTCGTTGACCAAGAAAG  Raphanus raphanistrum subsp. landra
EY917528       <-- GAGAAATGGGTATCCTCGATCTCGGAACTTCTCCTCGTTGACCAAGAAAG  Raphanus raphanistrum subsp. landra
EX761951       --> TAGAAATGGGTATCCTCCATCTCGAGACTTCTCCTCGTTGACCAAGAAAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX765086       --> TAGAAATGGGTATCCTCCATCTCGAAACTTCTCCTCGTTGACCAAGAAAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EV524448       --> GAGAAATGGGTATCCTCGATCTCGGAACTTCTCCTCGTTGACCAAGAAAG  Raphanus raphanistrum subsp. maritimus
EY948677       --> GAGAAATGGGTATCCTCGATCTCGGAACTTCTCCTCGTTGACCAAGAAAG  Raphanus sativus cv Rat-Tail Radish #3870
EV568320       --> GAGAAATGGGTATCCTCGATCTCGGAACTTCTCCTCGTTGACCAAGAAAG  Raphanus raphanistrum subsp. landra
EY921371       --> GAGAAATGGGTATCCTCGATCTCGGAACTTCTCCTCGTTGACCAAGAAAG  Raphanus raphanistrum subsp. landra

               201    -    251
UN21727        --> ATGACCTAACATTGGAGGAAGAAGCTGAGAGGAAAATAGGATGGATGCTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX766328       <-- ATGACCTTACATTGGAGGAAGAAGCTGAGAGGAAAATAGGATGGATGCTG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX768893       <-- ATGACCTTACATTGGAGGAAGAAGCTGAGAGGAAAATAGGATGGATGCTG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY944336       <-- ATGACCTAACATTGGAGGAAGAAGCTGAGAGGAAAATAGGATGGATGCTG  Raphanus sativus cv Rat-Tail Radish #3870
EV529443       <-- ATGACCTAACATTGGAGGAAGAAGCTGAGAGGAAAATAGGATGGATGCTG  Raphanus raphanistrum subsp. maritimus
EV573076       <-- ATGACCTAACATTGGAGGAAGAAGCTGAGAGGAAAATAGGATGGATGCTG  Raphanus raphanistrum subsp. landra
EY917528       <-- ATGACCTAACATTGGAGGAAGAAGCTGAGAGGAAAATAGGATGGATGCTG  Raphanus raphanistrum subsp. landra
EX761951       --> ATGACCTTACATTGGAGGAAGAAGCTGAGAGGAAAATAGGATGGATGCTG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX765086       --> ATGACCTTACATTGGAGGAAGAAGCTGAGAGGAAAATAGGATGGATGCTG  Raphanus raphanistrum subsp. raphanistrum (NY)
EV524448       --> ATGACCTAACATTGGAGGAAGAAGCTGAGAGGAAAATAGGATGGATGCTG  Raphanus raphanistrum subsp. maritimus
EY948677       --> ATGACCTAACATTGGAGGAAGAAGCTGAGAGGAAAATAGGATGGATGCTG  Raphanus sativus cv Rat-Tail Radish #3870
EV568320       --> ATGACCTAACATTGGAGGAAGAAGCTGAGAGGAAAATAGGATGGATGCTG  Raphanus raphanistrum subsp. landra
EY921371       --> ATGACCTAACATTGGAGGAAGAAGCTGAGAGGAAAATAGGATGGATGCTG  Raphanus raphanistrum subsp. landra

               251    -    301
UN21727        --> AAGCTTTTCTTTGCTGGGACAGCTACCTATGTTGGATACCAGTTCTTCCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX766328       <-- AAGCTTTTCTTTGCTGGGACAGCTACCTATGTTGGATACCAGTTCTTCCC
EX768893       <-- AAGCTTTTCTTTGCTGGGACAGCTACCTATGTTGGATACCAGTTCTTCCC
EY944336       <-- AAGCTTTTCTTTGCTGGGACAGCTACCTATGTTGGATACCAGTTCTTCCC
EV529443       <-- AAGCTTTTCTTTGCTGGGACAGCTACCTATGTTGGATACCAGTTCTTCCC
EV573076       <-- AAGCTTTTCTTTGCTGGGACAGCTACCTATGTTTGATACCAGTTCTTCCC
EY917528       <-- AAGCTTTTCTTTGCTGGGACAGCTACCTATGTTGGATACCAGTTCTTCCC
EX761951       --> AAGCTTTTCTTTGCTGGGACAGCTACCTATGTTGGATACCAGTTCTTCCC
EX765086       --> AAGCTTTTCTTTGCTGGGACAGCTACCTATGTTGGATACCAGTTCTTCCC
EV524448       --> AAGCTTTTCTTTGCTGGGACAGCTACCTATGTTGGATACCAGTTCTTCCC
EY948677       --> AAGCTTTTCTTTGCTGGGACAGCTACCTATGTTGGATACCAGTTCTTCCC
EV568320       --> AAGCTTTTCTTTGCTGGGACAGCTACCTATGTTTGATACCAGTTCTTCCC
EY921371       --> AAGCTTTTCTTTGCTGGGACAGCTACCTATGTTGGATACCAGTTCTTCCC

               301    -    351
UN21727        --> TTATATGGGTGATACTTTGATTCAGCAATCAGTCTCGCTTTTACATGTGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX766328       <-- TTATATGGGTGATACTTTGATTCAGCAATCAGTCTCGCTTTTACATGTGA
EX768893       <-- TTATATGGGTGATACTTTGATTCAGCAATCAGTCTCGCTTTTACATGTGA
EY944336       <-- TTATATGGGTGATACTTTGATTCAGCAATCAGTCTCGCTTTTACATGTGA
EV529443       <-- TTATATGGGTGATACTTTGATTCAGCAATCAGTCTCGCTTTTACATGTGA
EV573076       <-- TTATATGGGTGATACTTTGATTCAGCAATCAGTCTCGCTTTTACATGGGA
EY917528       <-- TTATATGGGTGATACTTTGATTCAGCAATCAGTCTCGCTTTTACATGTGA
EX761951       --> TTATATGGGTGATACTTTGATTCAGCAATCAGTCTCGCTTTTACATGTGA
EX765086       --> TTATATGGGTGATACTTTGATTCAGCAATCAGTCTCGCTTTTACATGTGA
EV524448       --> TTATATGGGTGATACTTTGATTCAGCAATCAGTCTCGCTTTTACATGTGA
EY948677       --> TTATATGGGTGATACTTTGATTCAGCAATCAGTCTCGCTTTTACATGTGA
EV568320       --> TTATATGGGTGATACTTTGATTCAGCAATCAGTCTCGCTTTTACATGTGA
EY921371       --> TTATATGGGTGATACTTTGATTCAGCAATCAGTCTCGCTTTTACATGTGA

               351    -    401
UN21727        --> AGGATCCCTTGTTTAAGAGAATAGGTGCTTCTAGACTTTCCCGTTTCGCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX766328       <-- AGGATCCCTTGTTTAAGAGAATAGGAGCTTCTAGGCTTTCCCGTTTCGCC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX768893       <-- AGGATCCCTTGTTTAAGAGAATAGGAGCTTCTAGGCTTTCCCGTTTCGCC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY944336       <-- AGGATCCCTTGTTTAAGAGAATAGGTGCTTCTAGACTTTCCCGTTTCGCC  Raphanus sativus cv Rat-Tail Radish #3870
EV529443       <-- AGGATCCCTTGTTTAAGAGAATAGGTGCTTCTAGACTTTCCCGTTTCGCC  Raphanus raphanistrum subsp. maritimus
EV573076       <-- AGGATCCCTTGTTTAAGAGAATAGGTGCTTCTAGACTTTCCCGTTTCGCC  Raphanus raphanistrum subsp. landra
EY917528       <-- AGGATCCCTTGTTTAAGAGAATAGGCGCTTCTAGACTTTCCCGTTTCGCC  Raphanus raphanistrum subsp. landra
EX761951       --> AGGATCCCTTGTTTAAGAGAATAGGAGCTTCTAGGCTTTCCCGTTTCGCC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX765086       --> AGGATCCCTTGTTTAAGAGAATAGGAGCTTCTAGGCTTTCCCGTTTCGCC  Raphanus raphanistrum subsp. raphanistrum (NY)
EV524448       --> AGGATCCCTTGTTTAAGAGAATAGGTGCTTCTAGACTTTCCCGTTTCGCC  Raphanus raphanistrum subsp. maritimus
EY948677       --> AGGATCCCTTGTTTAAGAGAATAGGTGCTTCTAGACTTTCCCGTTTCGCC  Raphanus sativus cv Rat-Tail Radish #3870
EV568320       --> AGGATCCCTTGTTTAAGAGAATAGGTGCTTCTAGACTTTCCCGTTTCGCC  Raphanus raphanistrum subsp. landra
EY921371       --> AGGATCCCTTGTTTAAGAGAATAGGCGCTTCTAGACTTTCCCGTTTCGCC  Raphanus raphanistrum subsp. landra

               401    -    451
UN21727        --> ATTGATGATGAGAGGAGGATGAAGGTTGTAGAGTTGGGTGGGGCTCAAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX766328       <-- ATTGATGATTAGAGGAGGATGAAGGTTGTAGAGTTGGGTGGGGCTCAAGA
EX768893       <-- ATTGATGATGAGAGGAGGATGAAGGTTGTAGAGTTGGGTGGGGCTCAAGA
EY944336       <-- ATTGATGATGAGAGGAGGATGAAGGTTGTAGAGTTGGGTGGGGCTCAAGA
EV529443       <-- ATTGATGATGAGAGGAAGATGAAGGTTGTAGAGTTGGGTGGGGCTCAAGA
EV573076       <-- ATTGATGATGAGAGGAGGATGAAGGTTGTAGAGTTGGGTGGGGCTCAAGA
EY917528       <-- ATTGATGATGAGAGGAGGATGAAGGTTGTAGAGTTGGGTGGGGCTCAAGA
EX761951       --> ATTGATGATTAGAGGAGGATGAAGGTTGTAGAGTTGGGTGGGGCTCAAGA
EX765086       --> ATTGATGATGAGAGGAGGATGAAGGTTGTAGAGTTGGGTGGGGCTCAAGA
EV524448       --> ATTGATGATGAGAGGAAGATGAAGGTTGTAGAGTTGGGTGGGGCTCAAGA
EY948677       --> ATTGATGATGAGAGGAGGATGAAGGTTGTAGAGTTGGGTGGGGCTCAAGA
EV568320       --> ATTGATGATGAGAGGAGGATGAAGGTTGTAGAGTTGGGTGGGGCTCAAGA
EY921371       --> ATTGATGATGAGAGGAGGATGAAGGTTGTAGAGTTGGGTGGGGCTCAAGA

               451    -    501
UN21727        --> GCTTCTTCACATGCTGGGCGCTGCTAAAGATGACAAGACAAGGAAAGAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX766328       <-- GCTTCTTCACATGCTGGGCGCTGCTAAAGATGACAAGACAAGGAAAGAAG
EX768893       <-- GCTTCTTCACATGCTGGGCGCTGCTAAAGATGACAAGACAAGGAAAGAAG
EY944336       <-- GCTTCTTCACATGCTGGGCGCTGCTAAAGATGACAAGACAAGGAAAGAAG
EV529443       <-- GCTTCTTCACATGCCGGGCGCTGCTAAAGATGACAAGACAAGGAAAGAAG
EV573076       <-- GCTTCTTCACATGCTGGGCGCTGCTAAAGATGACAAGACAAGGAAAGAAG
EY917528       <-- GCTTCTTCACATGCTGGGCGCTGCTAAAGATGACAAGACAAGGAAAGAAG
EX761951       --> GCTTCTTCACATGCTGGGCGCTGCTAAAGATGACAAGACAAGGAAAGAAG
EX765086       --> GCTTCTTCACATGCTGGGCGCTGCTAAAGATGACAAGACAAGGAAAGAAG
EV524448       --> GCTTCTTCACATGCCGGGCGCTGCTAAAGATGACAAGACAAGGAAAGAAG
EY948677       --> GCTTCTTCACATGCTGGGCGCTGCTAAAGATGACAAGACAAGGAAAGAAG
EV568320       --> GCTTCTTCACATGCTGGGCGCTGCTAAAGATGACAAGACAAGGAAAGAAG
EY921371       --> GCTTCTTCACATGCTGGGCGCTGCTAAAGATGACAAGACAAGGAAAGAAG

               501    -    551
UN21727        --> CTCTAAAAGCTCTTGCCGCTCTCTCTAAATCAGATGAAGCTGCCAACTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX766328       <-- CTCTAAAAGCTCTTGCCGCTCTCTCTAAATCAGATGAAGCTGCCAACTTC
EX768893       <-- CTCTAAAAGCTCTTGCCGCTCTCTCTAAATCAGATGAAGCTTCCAACTTC
EY944336       <-- CTCTAAAAGCTCTTGCCGCTCTCTCTAAATCAGATGAAGCTGCCAACTTC
EV529443       <-- CTTTAAAAGCTCTTGCCGCTCTCTCTAAATCAGATGAAGCTGCCAACTTC
EV573076       <-- CTCTAAAAGCTCTTGCCGCTCTCTCTAAATCAGATGAAGCTGCCAACTTC
EY917528       <-- CTCTAAAAGCTCTTGCCGCTCTCTCTAAATCAGATGAAGCTGCCAACTTC
EX761951       --> CTCTAAAAGCTCTTGCCGCTCTCTCTAAATCAGATGAAGCTGCCAACTTC
EX765086       --> CTCTAAAAGCTCTTGCCGCTCTCTCTAAATCAGATGAAGCTTCCAACTTC
EV524448       --> CTCTAAAAGCTCTTGCCGCTCTCTCTAAATCAGATGAAGCTGCCAACTTC
EY948677       --> CTCTAAAAGCTCTTGCCGCTCTCTCTAAATCAGATGAAGCTGCCAACTTC
EV568320       --> CTCTAAAAGCTCTTGCCGCTCTCTCTAAATCAGATGAAGCTGCCAACTTC
EY921371       --> CTCTAAAAGCTCTTGCCGCTCTCTCTAAATCAGATGAAGCTGCCAACTTC

               551    -    601
UN21727        --> CTGGGATCTAAAGGAGCACTCTCTATCGTCAAATCGACTCCAGATTCCTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX766328       <-- CTGGGATCTAAAGGAGCACTCTCTATCGTCAAATCGACTCCAGATTCCTC
EX768893       <-- CTGGGATCTAAAGGAGCACTCTCTATCGTCAAATCGACTCCAGATTCCTC
EY944336       <-- CTGGGATCTAAGGGAGCACTCTCTATCCTCAAATCGACTCCAGATTCCTC
EV529443       <-- CTGGGATCTAAAGGAGCACTCTCTATCGTCAAATCGACTCCAGATTCCTC
EV573076       <-- CTGGGATCTAAAGGAGCACTCTCTATCGTCAAATCGACTCCAGATTCCTC
EY917528       <-- CTGGGATCTAAAGGAGCACTCTCTATCGTCAAATCGACTCCAGATTCCTC
EX761951       --> CTGGGATCTAAAGGAGCACTCTCTATCGTCAAATCGACTCCAGATTCCTC
EX765086       --> CTGGGATCTAAAGGAGCACTCTCTATCGTCAAATCGACTCCAGATTCCTC
EV524448       --> CTGGGATCTAAAGGAGCACTCTCTATCGTCAAATCGACTCCAGATTCCTC
EY948677       --> CTGGGATCTAAGGGAGCACTCTCTATCCTCAAATCGACTCCAGATTCCTC
EV568320       --> CTGGGATCTAAAGGAGCACTCTCTATCGTCAAATCGACTCCAGATTCCTC
EY921371       --> CTGGGATCTAAAGGAGCACTCTCTATCGTCAAATCGACTCCAGATTCCTC

               601    -    651
UN21727        --> TGAAGATTCAGACATTTCAACTTACAAGTCAAACATACTCAAGAAGCTAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX766328       <-- TGAAGATTCAGACATTTCAACTTACGAGTCAAACATACTCAAGAAGCTAG
EX768893       <-- TGAAGATTCAGACATTTCAACTTACAAGTCAAACATACTCAAGAAGCTAG
EY944336       <-- TGAAGATTCAGACATTTCAACTTACAAGTCAAACATACTCAAGAAGCTAG
EV529443       <-- TGAAGATTCAGACATTTCAACTTACAAGTCAAACATACTCAAGAAGCTAG
EV573076       <-- TGAAGATTCAGACATTTCAACTTACAAGTCAAACATACTCAAGAAGCTAG
EY917528       <-- TGAAGATTCAGACATTTCAACTTACAAGTCAAACATACTCAAGAAGCTAG
EX761951       --> TGAAGATTCAGACATTTCAACTTACGAGTCAAACATACTCAAGAAGCTAG
EX765086       --> TGAAGATTCAGACATTTCAACTTACAAGTCAAACATACTCAAGAAGCTAG
EV524448       --> TGAAGATTCAGACATTTCAACTTACAAGTCAAACATACTCAAGAAGCTAG
EY948677       --> TGAAGATTCAGACATTTCAACTTACAAGTCAAACATACTCAAGAAGCTAG
EV568320       --> TGAAGATTCAGACATTTCAACTTACAAGTCAAACATACTCAAGAAGCTAG
EY921371       --> TGAAGATTCAGACATTTCAACTTACAAGTCAAACATACTCAAGAAGCTAG

               651    -    701
UN21727        --> ATGATAAAGACCTACCTCTTTCTTCCAACTGAATTTAGTCTTTTCAGAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX766328       <-- ATGATAAAGACCTAGCTCTTTCTTCCAACTGAATTTAGTCTTTTCAGAAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX768893       <-- ATGATAAAGACCTAGCTCTTTCTTCCAACTGAATTTAGTCTTTTCAGAAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY944336       <-- ATGATAAAGACCTACCTCCTTCTTCCAACTGAATTTAGTCTTTTCAGAAA  Raphanus sativus cv Rat-Tail Radish #3870
EV529443       <-- ATGATAAAGACCTACCTCTTTCTTCCAACTGAATTTAGTCTTTTCAGAAA  Raphanus raphanistrum subsp. maritimus
EV573076       <-- ATGATAAAGACCTACCTCTTTCTTCCAACTGAATTTAGTCTTTTCAGAAA  Raphanus raphanistrum subsp. landra
EY917528       <-- ATGATAAAGACCTACCTCTTTCTTCCAACTGAATTTAGTCTTTTCAGAAA  Raphanus raphanistrum subsp. landra
EX761951       --> ATGATAAAGACCTAGCTCTTTCTTCCA-CTGAATTTAGTCTTTTCAGAAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX765086       --> ATGATAAAGACCTAGCTCTTTCTTCCAACTGAATTTAGT...........  Raphanus raphanistrum subsp. raphanistrum (NY)
EV524448       --> ATGATAAAGACCTACCTCTTTCTTCCAACTGAATTTAGTCTTTTCAGAAA  Raphanus raphanistrum subsp. maritimus
EY948677       --> ATGATAAAGACCTACCTCCTTCTTCCAACTGAATTTAGTCTTTTCAGAAA  Raphanus sativus cv Rat-Tail Radish #3870
EV568320       --> ATGATAAAGACCTACCTCTTTCTTCCAACTGAATTTAGTCTTTTCAGAAA  Raphanus raphanistrum subsp. landra
EY921371       --> ATGATAAAGACCTACCTCTTTCTTCCAACTGAATTTAGTCTTTTCAGAAA  Raphanus raphanistrum subsp. landra

               701    -    751
UN21727        --> ATGGATAGGTCCCAGGAATGATTAAGTGAACTCTTGAATTTTTGT--CCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX766328       <-- -TGGATAGGTCCCAGGATTGAT-AAGTGAACTCTTGAATTTTTGT--CCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX768893       <-- -TGGATAGGTCCCAGGATTGAT-AAGTGAACTCTTGAATTTTTGT--CCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY944336       <-- ATGGATAGGTCCCAGGAATGATTAAGTGAACTCTTGAATTTTTGT--CCA  Raphanus sativus cv Rat-Tail Radish #3870
EV529443       <-- ATGGATAGGTCCCCGGAATGAT-AAGTGAACTCTTGAATTTTTTTTGCCA  Raphanus raphanistrum subsp. maritimus
EV573076       <-- ATGGATAGGTCCCAGGAATGATTAAGTGAACTCTTGAATTTTCGT--CTA  Raphanus raphanistrum subsp. landra
EY917528       <-- ATGGATAGGTCCCAGGAATGATTAAGTGAACTCTTGAATTTTTGT--CCA  Raphanus raphanistrum subsp. landra
EX761951       --> -TGGATAGGTCCCAGGATTGAT-AAGTGA-CTCTTGAATTTT-GT--CCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX765086       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV524448       --> ATGGATAGGTCCCAGGAATGAT-AAGTGAACTCTTGAATTTTTTTTGCCA  Raphanus raphanistrum subsp. maritimus
EY948677       --> ATGGATAGGTCCCAGGAATGATTAAGTGAACTCTTGAATTTTTGT--CCA  Raphanus sativus cv Rat-Tail Radish #3870
EV568320       --> ATGGATAGGTCCCAGGAATGATTAAGTGAACTCTTGAATTTTCGT--CTA  Raphanus raphanistrum subsp. landra
EY921371       --> ATGGATAGGTCCCAGGAATGATTAAGTGAACTCTTGAATTTTTGT--CCA  Raphanus raphanistrum subsp. landra

               751    -    801
UN21727        --> AAGGAAAGAAGCAGTCTGATTCTCTAGCTTCTATTCTTACTGCTGAATAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX766328       <-- AAGGAAAGAAGCAGTCTGATTCTCTAGCTTCTATTCTTACTGCTGAATAC
EX768893       <-- AAGGAAAGAAGCAGTCTGATTCTCTAGCTTCTATTCTTACTGCTGAATAC
EY944336       <-- AAGGAAAGAAGCAGTCTGATTCTCTAGCTTCTATTCTTACTGCTGAATAC
EV529443       <-- AAGGAAAGAAGCCGTTTGATTCTCTAGCTTCTATTCTTACTGCTGAATAC
EV573076       <-- AAGGAAAGAAGCAGTTTGAT..............................
EY917528       <-- AAGGAAAGAAGCAGTCTGATTCTCTAGCTTCTATTCTTACTGCTGAATAC
EX761951       --> AAG-AAAGA-GCAGTCTGAT-CTCTAGCTTCTttct..............
EX765086       --> ..................................................
EV524448       --> AAGGAAAGAAGCAGTCTGATTCTCTAGCTTCTATTCTTACTGCTGAATAC
EY948677       --> AAGGAAAGAAGCAGTCTGATTCTCTAGCTTCTATTCTTACTGCTGAATAC
EV568320       --> AAGGAAAGAAGCAGTCTGATTCTCTAGCTTCTATTCTTACTGCTGAATAC
EY921371       --> AAGGAAAGAAGCAGTCTGATTCTCTAGCTTCTATTCTTACTGCTGA-TAC

               801    -    851
UN21727        --> TGTTTTGATTCCAATGTTCTTTGTTCAAATGAAA-TAATGGTTTAAGGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX766328       <-- TGTTTTGATTCCAATGTTCTTTGTTCAAAT-AAA-TAATGGTTTAAGG..
EX768893       <-- TGTTTTGATTCCAATGTTCTTTGTTCAAAT-AAA-TAATGGTTTAAGGAA
EY944336       <-- TGTTTTGGTTCCAATGTTCTTTGTTCAAATGAAAATAATGGTTTAAGGAA
EV529443       <-- TGTTTTGAT.........................................
EV573076       <-- ..................................................
EY917528       <-- TGTTTTGATTCCAATGTTCaaatgaaaataatggtttaacg.........
EX761951       --> ..................................................
EX765086       --> ..................................................
EV524448       --> TGTTTTGATTCCAATGTTCTTTGTTCA.......................
EY948677       --> TGTTTTGGTTCCAATGTTCTTTGTTCAAATGAAA-TAATG..........
EV568320       --> TGTTTTGATTCCAATGTTCTTTGTTCAAATGAAAATAATGGTTT......
EY921371       --> TGTTTTGATTCCAATGTTCaaatgaaataatggtttaacg..........

               851    -    901
UN21727        --> TAAGTTTTAAAGAATGTGTAGC
                   ~~~~~~~~~~~~~~~~~~~~~~
EX766328       <-- ......................
EX768893       <-- TAAGTTTTAAAGAATGTGTAGC
EY944336       <-- TAAGTCTTAAAGAATGTGc...
EV529443       <-- ......................
EV573076       <-- ......................
EY917528       <-- ......................
EX761951       --> ......................
EX765086       --> ......................
EV524448       --> ......................
EY948677       --> ......................
EV568320       --> ......................
EY921371       --> ......................