1      -     51
UN21745        --> GGAGACGATGAATAACAATATAGAGTTGAATCTCACTTTGAATCCTTCAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY909652       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD943594       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EX751979       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD536908       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD975843       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV548609       --> GGAGACGATGAATAACAATATAGAGTTGAATCTCACTTTGAATCCTTCAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX772860       --> GGAGACGATGAATAACAATATAGAGTTAAATCTCACTTTGAATCCCTCAT  Raphanus raphanistrum subsp. landra
EY897507       --> GGAGACGATGAATAACAATATAGAGTTAAATCTCACTTTGAATCCCTCAT  Raphanus raphanistrum subsp. maritimus
EY913419       --> GGAGACGATGAATAACAATATAGAGTTGAATCTCACTTTGAATCCTTCAT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD540394       --> GGAGACGATGAATAACAATATAGAGTTGAATCTCACTTTGAATCCTTCAT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD947700       --> GGAGACGATGAATAACAATATAGAGTTGAATCTCACTTTGAATCCCTCAT  Raphanus sativus cv Early Scarlet Globe
FD979869       --> GGAGGCGATGAATAACAATATAGAGTTGAATCCCACTTTGAATCCTTCAT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD980301       --> GGAGACGATGAATAACAATATAGAGTTGAATCTCACTTTGAATCCTTCAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EV528624       --> .....gGATGAATAACAATATAGAGTTAAATCTCACTTTGAATCCCTCAT  Raphanus raphanistrum subsp. maritimus
EX747898       --> ..................................................  Raphanus raphanistrum subsp. maritimus

               51     -    101
UN21745        --> CGGCTCCCCCCAATGAAACTCCCCCGAGTAACAACCAAACCCCAAGAAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY909652       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD943594       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EX751979       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD536908       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD975843       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV548609       --> CGGCTCCCCCCAATGAAACTCCCCCGAGTAACAACCAAACCCCAAGAAGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX772860       --> CGGCTCCCCCCAATGAAACTCCCCCGAGTCACAACCAAACCCCAAGAAGA  Raphanus raphanistrum subsp. landra
EY897507       --> CGGCTCCCCCCAATGAAACTCCCCCGAGTCACAACCAAACCCCAAGAAGA  Raphanus raphanistrum subsp. maritimus
EY913419       --> CGGCTCCCCCCAATGAAACTCCCCCGAGTAACAACCAAACCCCAAGAAGA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD540394       --> CGGCTCCCCCCAATGAAACTCCCCCGAGTAACAACCAAACCCCAAGAAGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD947700       --> CGGCTCCCCCCAATGAAACTCCCCCGAGTCACAACCAAACCCCAAGAAGA  Raphanus sativus cv Early Scarlet Globe
FD979869       --> CGGCTCCCCCCAATGAAACTCCCCCGAGTAACAACCAAACCCCAAGAAGA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD980301       --> CGGCTCCCCCCAATGAAACTCCCCCGAGTAACAACCAAACCCCAAGAAGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV528624       --> CGGCTCCCCCCAATGAAACTCCCCCGAGTCACAACCAAACCCCAAGAAGA  Raphanus raphanistrum subsp. maritimus
EX747898       --> ..................................................  Raphanus raphanistrum subsp. maritimus

               101    -    151
UN21745        --> AAACGCACTAGGAGAACCTCCAACAACGAAACCGGTTCTTCTTCCTCTCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY909652       <-- ..................................................
FD943594       <-- ..................................................
EX751979       <-- ..................................................
FD536908       <-- ..................................................
FD975843       <-- ..................................................
EV548609       --> AAACGCACTAGGAGAACCTCCAACAACGAAACCGGTTCTTCTTCCTCTCC
EX772860       --> AAACGCACTAGGAGAACCTCCAACAACGAAACCGGTTCTTCTTCCTCTCC
EY897507       --> AAACGCACTAGGAGAACCTCCAACAACGAAACCGGTTCTTCTTCCTCTCC
EY913419       --> AAACGCACTAGGAGAACCTCCAACAACGAAACCGGTTCTTCTTCCTCTCC
FD540394       --> AAACGCACTAGGAGAACCTCCAACAACGAAACCGGTTCTTCTTCCTCTCC
FD947700       --> AAACGCACTAGGAGAACCTCCAACAACGAAACCGGTTCTTCTTCCTCTCC
FD979869       --> AAACGCACTAGGAGAACCTCCAACAACGAAACCGGTTCTTCTTCCTCTCC
FD980301       --> AAACGCACTAGGAGAACCTCCAACAACGAAACCGGTTCTTCTTCCTCTCC
EV528624       --> AAACGCACTAGGAGAACCTCCAGCAACGAAACCGGTTCTTCTTCCTCTCC
EX747898       --> ..........GGAGAACCTCCAACAACGAAACCGGTTCTTCTTCCTCTCC

               151    -    201
UN21745        --> GAGGCCTAAACCAGACCCTGATGCTCCCTTAATCACAGAGCCATGCAAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY909652       <-- ...............................ATCACAGAGCCATGCAAAG
FD943594       <-- ...................................CAGAGCCATGCAAAG
EX751979       <-- ..................................................
FD536908       <-- ..................................................
FD975843       <-- ..................................................
EV548609       --> GAGGCCTAAACCAGACCCTGATGCTCCCTTAATCACAGAGCCATGCAAAG
EX772860       --> GAGGCCTAAACCAGACCCTGATGCTCCCTTAATCACAGAGCCATGCAAAG
EY897507       --> GAGGCCTAAACCAGACCCTGATGCTCCCTTAATCACAGAGCCATGCAAAG
EY913419       --> GAGGCCTAAACCAGACCCTGATGCTCCCTTAATCACAGAGCCATGCAAAG
FD540394       --> GAGGCCTAAACCAGACCCTGATGCTCCCTTAATCACAGAGCCATGCGAAG
FD947700       --> GAGGCCTAAGCCAGACCCTGATGCTCCCTTAATCACAGAGCCATGCAAAG
FD979869       --> GAGGCCTAAACCAGACCCTGATGCTCCCTTAATCACAGAGCCATGCAAAG
FD980301       --> GAGGCCTAAACCAGACCCTGATGCTCCCTTAATCACAGAGCCATGCAAAG
EV528624       --> GAGGCCTAAACCAGACCCTGATGCTCCCTTAATCACAGAGCCATGCAAAG
EX747898       --> GAGGCCTAAGCCAGACCCTGATGCTCCCTTAATCACAGAGCCATGCAAAG

               201    -    251
UN21745        --> TATGTGGCAGAAAGTTCTGGTCTTCCAAGGCACTCCATGGACACATGAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY909652       <-- TATGTGGCAGAAAGTTCTGGTCTTCCAAGGCACTCCATGGACACATGAGA
FD943594       <-- TATGTGGCAGAAAGTTCTGGTCTTCCAAGGCACTCCATGGACACATGAGA
EX751979       <-- ..................................................
FD536908       <-- ..................................................
FD975843       <-- ..................................................
EV548609       --> TATGTGGCAGAAAGTTCTGGTCTTCCAAGGCACTCCATGGACACATGAGA
EX772860       --> TATGTGGCAGAAAGTT-TGGTCTTCCAAGGCACTCCATGGACACATGAGA
EY897507       --> TATGTGGCAGAAAGTTCTGGTCTTCCAAGGCACTCCATGGACACATGAGA
EY913419       --> TATGTGGCAGAAAGTTCTGGTCTTCCAAGGCACTCCATGGACACATGAGA
FD540394       --> TATGTGGCAGAAAGTTCTGGTCTTCCAAGGCACTCCATGGACACATGAGA
FD947700       --> TATGTGGCAGAAAGTTCTGGTCTTCCAAGGCACTCCATGGACACATGAGA
FD979869       --> TATGTGGCAGAAAGTTCTGGTCTTCCAAGGCACTCCATGGACACATGAGA
FD980301       --> TATGTGGCAGAAAGTTCTGGTCTTCCAAGGCACTCCATGGACACATGAGA
EV528624       --> TATGTGGCAGAAAGTTCTGGTCTTCCAAGGCACTCCATGGACACATGAGA
EX747898       --> TATGTGGCAGAAAGTTCTGGTCTTCCAAGGCACTCCATGGACACATGAGA

               251    -    301
UN21745        --> TCTCACCCTGAGCGTCAATGGCGTGGCATCAACCCTC-CTCCTAACCACC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY909652       <-- TCTCACC-TGAGCGTCAATGGCGTGGCATCAACCCTCTCCCCTAACCACC
FD943594       <-- TCTCACCCTGAGCGTCAATGGCGTGGCATCAACCCTC-CTCCTAACCACC
EX751979       <-- ..........................................TAACCACC
FD536908       <-- .............................................CCACC
FD975843       <-- ...............................................ACC
EV548609       --> TCTCACCCTGAGCGTCAATGGCGTGGCATCAACCCTC-CTCCTAACCACC
EX772860       --> TCTCACCCTGAGCGTCAATGGCGTGGCATCAACCCTC-CTCCTAACCACC
EY897507       --> TCTCACCTTGAGCGTCAATGGCGTGGCATCAACCCTC-CTCCTAACCACC
EY913419       --> TCTCACCCTGAGCGTCAATGGCGTGGCATCAACCCTC-CTCCTAACCACC
FD540394       --> TCTCACCCTGAGCGTCAATGGCGTGGCATCAACCCTC-CTCCTAACCACC
FD947700       --> TCTCACCCTGAGCGTCAATGGCGTGGCATCAACCCTC-CTCCTAACCACC
FD979869       --> TCTCACCCTGAGCGTCAATGGCGTGGCATCAACCCTC-CTCCTAACCACC
FD980301       --> TCTCACCCTGAGCGTCAATGGCGTGGCATCAACCCTC-CTCCTAACCACC
EV528624       --> TCTCACCCTGAGCGTCAATGGCGTGGCATCAACCCTC-CTCCTAACCACC
EX747898       --> TCTCACCCTGAGCGTCGATGGCGTGGCATCAACCCTC-CTCCTAACCACC

               301    -    351
UN21745        --> AACCAACCGTGACGGCAGCACCCCCGGTGTCTGTTACAGCGGAAGGCGGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY909652       <-- AACCAACCGTGACGGCAGCACCCCCGGTGTCTGTTACAGCGGAAGGCGGT
FD943594       <-- AACCAACCGTGACGGCAGCACCCCCGGTGTCTGTTACAGCGGAAGACGGT
EX751979       <-- AACCAACCGTGACGGCAGCACCCCCGGTGTCTGTTACAGCGGAAGGCGGT
FD536908       <-- AACCAACCGTGACGGCAGCACCCCCGGTGTCTGTTACAGCGGAAGGCGGT
FD975843       <-- AACCAACCGTGACGGCAGCACCCCCGGTGTCTGTTACAGCGGAAGGCGGT
EV548609       --> AACCAACCGTGACGGCAGCACCCCCGGTGTCTGTTACAGCGGAAGGCGGT
EX772860       --> AACCAACCGTGACGGCAGCACCCCCGGTGTCTGTTACAGCGGAAGGCGGT
EY897507       --> AACCAACCGTGACGGCAGCACCCCCGGTGTCTGTTACAGCGGAAGGCGGT
EY913419       --> AACCAACCGTGACGGCAGCACCCCCGGTGTCTGTTACAGCGGAAGGCGGT
FD540394       --> AACCAACCGTGACGGCAGCACCCCCGGTGTCTGTTACAGCGGAAGGCGGT
FD947700       --> AACCAACCGTGACGGCAGCACCCCCGGTGTCTGTTACAGCGGAAGACGGT
FD979869       --> AACCAACCGTGACGGCAGCACCCCCGGTGTCTGTTACAGCGGAAGGCGGT
FD980301       --> AACCAACCGTGACGGCAGCACCCCCGGTGTCTGTTACAGCGGAAGGCGGT
EV528624       --> AACCAACCGTGACGGCAGCACCCCCGGTGTCTGTTACAGCGGAAGGCGGT
EX747898       --> AACCAACCGTGACGGCAGCACCCCCGGTGTCTGTTACAGCGGAAGGCGGT

               351    -    401
UN21745        --> CAAGTGTTGGCTATTGCCTCCACGACCGGTTCAAGTGTAGTAGGAGTTGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY909652       <-- CAAGTGTTGGCTATTGCCTCCACGACCGGTTCAAGTGTAGTAGGAGTTGA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD943594       <-- CAAGTGTTGGCTATTGCCTCCACGACCGGTTCAAGTGTGGTAGGAGTTGA  Raphanus sativus cv Early Scarlet Globe
EX751979       <-- CAAGTGTTGGCTATTGCCTCCACGACCGGTTCAAGTGTGGTAGGAGTTGA  Raphanus raphanistrum subsp. maritimus
FD536908       <-- CAAGTGTTGGCTATTGCCTCCACGACCGGTTCAAGTGTAGTAGGAGTTGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD975843       <-- CAAGTGTTGGCTATTGCCTCCACGACCGGTTCAAGTGTAGTAGGAGTTGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV548609       --> CAAGTGTTGGCTATTGCCTCCACGACCGGTTCAAGTGTAGTAGGAGTTGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX772860       --> CGAGTGTTGGCTATTGCCTCCACGACCGGTTCAAGTGTAGTAGGAGTTGA  Raphanus raphanistrum subsp. landra
EY897507       --> CAAGTGTTGGCTATTGCCTCCACGACCGGTTCAAGTGCAGTAGGAGTTGA  Raphanus raphanistrum subsp. maritimus
EY913419       --> CAAGTGTTGGCTATTGCCTCCACGACCGGTTCAAGTGTAGTAGGAGTTGA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD540394       --> CAAGTGTTGGCTATTGCCTCCACGACCGGTTCAAGTGTAGTAGGAGTTGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD947700       --> CAAGTGTTGGCTATTGCCTCCACGACCGGTTCAAGTGTGGTAGGAGTTGA  Raphanus sativus cv Early Scarlet Globe
FD979869       --> CAAGTGTTGGCTATTGCCTCCACGACCGGTTCAAGTGTAGTAGGAGTTGA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD980301       --> CAAGTGTTGGCTATTGCCTCCACGACCGGTTCAAGTGTAGTAGGAGTTGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV528624       --> CAAGTGTTGGCTATTGCCTCCACGACCGGTTCAAGTGCAGTAGGAGTTGA  Raphanus raphanistrum subsp. maritimus
EX747898       --> CAAGTGTTGGCTATTGCCTCCACGACCGGTTCAAGTGTGGTAGGAGTTGA  Raphanus raphanistrum subsp. maritimus

               401    -    451
UN21745        --> ATGTGGAGGTTGTAAGAAAGTGTTTGAGTCACGTCAAGCATTAGATGGAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY909652       <-- ATGTGGAGGTTGTAAGAAAGTGTTTGAGTCACGTCAAGCATTAGATGGAC
FD943594       <-- ATGTGGAGGTTGTAAGAAAGTGTTTGAGTCACGTCAAGCATTAGATGGAC
EX751979       <-- ATGTGGAGGTTGTAAGAAAGTGTTTGAGTCACGTCAAGCATTAGATGGAC
FD536908       <-- ATGTGGAGGTTGTAAGAAAGTGTTTGAGTCACGTCAAGCATTAGATGGAC
FD975843       <-- ATGTGGAGGTTGTAAGAAAGTGTTTGAGTCACGTCAAGCATTAGATGGAC
EV548609       --> ATGTGGAGGTTGTAAGAAAGTGTTTGAGTCACGTCAAGCGTTAGATGGAC
EX772860       --> ATGTGAAGGTTGTAAGAAAATGTTTGAGTCACGTCAAGCGTTAGATGGAC
EY897507       --> ATGTGAAGGTTGTAAGAAAATGTTTGAGTCACGTCAAGCGTTAGATGGAC
EY913419       --> ATGTGGAGGTTGTAAGAAAGTGTTTGAGTCACGTCAAGCATTAGATGGAC
FD540394       --> ATGTGGAGGTTGTAAGAAAGTGTTTGAGTCACGTCAAGCATTAGATGGAC
FD947700       --> ATGTGGAGGTTGTAAGAAAGTGTTTGAGTCACGTCAAGCATTAGATGGAC
FD979869       --> ATGTGGAGGTTGTAAGAAAGTGTTTGAGTCACGTCAAGCATTAGATGGAC
FD980301       --> ATGTGGAGGTTGTAAGAAAGTGTTTGAGTCACGTCAAGCGTTAGATGGAC
EV528624       --> ATGTGAAGGTTGTAAGAAAATGTTTGAGTCACGTCAAGCGTTAGATGGAC
EX747898       --> ATGTGGAGGTTGTAAGAAAGTGTTTGAGTCACGTCAAGCATTAGATGGAC

               451    -    501
UN21745        --> ATATATGTTCCGCCATTTTGAACTTAAACGAAGATCCTCCTCCT-----T
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY909652       <-- ATGTATGTTCCGCCATTTTGAACTTAAACGAAGATCCTCCTCCT-----T  Raphanus raphanistrum subsp. raphanistrum (NY)
FD943594       <-- ATATATGTTCCGCCATTTTAAACTTAAACGAAGATCCTCCTCCT-----T  Raphanus sativus cv Early Scarlet Globe
EX751979       <-- ATATATGTTCCGCCATTTTAAACTTAAACGAAGATCCTCCTCCTACTCCT  Raphanus raphanistrum subsp. maritimus
FD536908       <-- ATGTATGTTCCGCCATTTTGAACTTAAACGAAGATCCTCCTCCT-----T  Raphanus raphanistrum subsp. raphanistrum (MS)
FD975843       <-- ATGTATGTTCCGCCATTTTGAACTTAAACGAAGATCCTCCTCCT-----T  Raphanus raphanistrum subsp. raphanistrum (NY)
EV548609       --> ATATATGTTCCGCCATTTTGAACTTAAACGAAGATCCTCCTCCT-----T  Raphanus raphanistrum subsp. raphanistrum (NY)
EX772860       --> ATATATGTTCCGCCATTTTGAACTTAAACGAGGATCCTCCT.........  Raphanus raphanistrum subsp. landra
EY897507       --> ATATATGTTCCGCCATTTTGAACTTAAACGAAGATCCTCC..........  Raphanus raphanistrum subsp. maritimus
EY913419       --> ATGTATGTTCCGCCATTTTGAACTTAAACGAAGATCCTCCTCCT-----T  Raphanus raphanistrum subsp. raphanistrum (NY)
FD540394       --> ATGTATGTTCCGCCATTTTGAACTTAAACGAAGATCCTCCTCCT-----T  Raphanus raphanistrum subsp. raphanistrum (MS)
FD947700       --> ATATATGTTCCGCCATTTTAAACTTAAACGAAGATCCTCCTCCT......  Raphanus sativus cv Early Scarlet Globe
FD979869       --> ATGTATGTTCCGCCATTTTGAACTTAAACGAAGATCCTCCTCCT-----T  Raphanus raphanistrum subsp. raphanistrum (NY)
FD980301       --> ATATATGTTCCGCCATTTTGAACTTAAACGAAGATCCTCCTCCT-----T  Raphanus raphanistrum subsp. raphanistrum (NY)
EV528624       --> ATATATGTTCCGCCATTTTGAACTTAAACGAAGATCCTCCTCCT-----T  Raphanus raphanistrum subsp. maritimus
EX747898       --> ATATATGTTCCGCCATTTTAAACTTAAACGAAGATCCTCCTC........  Raphanus raphanistrum subsp. maritimus

               501    -    551
UN21745        --> -CTCCTCCTCCTCCTCCTCCTC---AAGAGGTCGTTGATGAGAGTAGGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY909652       <-- -CTCCTCCTCCTCCTCCTCCTC---AAGAGGTCGTTGATGAGAGTAGGAG
FD943594       <-- -CTCCTCCTCCTCCTCCTCCTCCTCAAGAGGTCGTTGATGAGAGCAGGAG
EX751979       <-- CCTCCTCCTCCTCCTCCTCCTC---AAGAGGTCGTTGATGAGAGCAGGAG
FD536908       <-- -CTCCTCCTCCTCCTCC---TC---AAGAGGTCGTTGATGAGAGTAGGAG
FD975843       <-- -CTCCTCCTCCTCCTCC---TC---AAGAGGTCGTTGATGAGAGTAGGAG
EV548609       --> -CTCCTCCTCCTCCTCCTCCTC---AAGAGGTCGTTGATGAGAGTAGGAG
EX772860       --> ..................................................
EY897507       --> ..................................................
EY913419       --> -CTCCTCCTCCTCCTCCTCCTC---AAGAGGTCGTTGATGAGAGTAGGAG
FD540394       --> -CTCCTCCTCCTCCTCCTC------AAGAGGTCGTTGATGAGAGTAGGAG
FD947700       --> ..................................................
FD979869       --> -CTCCTCCTCCTCCTCCTC------AAGAGGTCGTTGATGAGAGTAGGAG
FD980301       --> -CTCCTCCTCCTCCTCCTCCTC---AAGAGGTCGTTGATGAGAGTAGGAG
EV528624       --> ..................................................
EX747898       --> ..................................................

               551    -    601
UN21745        --> TGTGATGTCGGCGTCAAGGATGAATCATCGATGTGACATCTGTTCTAAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY909652       <-- TGTTATGTCGGCGTCAAGGATGAATCATCGATGTGACATCTGTTCTAAAG
FD943594       <-- TGTGATGTTGGCGTCAAGGATGAATCATCGATGTGACATCTGTTTTAAAG
EX751979       <-- TGTGATGTTGGCGTCAAGGATGAATCATCGATGTGACATCTGTTCTAAAG
FD536908       <-- TGTGATGTCGGCGTCAAGGATGAATCATCGATGTGACATCTGTTCTAAAG
FD975843       <-- TGTGATGTCGGCGTCAAGGATGAATCATCGATGTGACATCTGTTCTAAAG
EV548609       --> TGTGATGTCGGCGTCAAGGATGAATCATCGATGTGACATCTGTTCTAAAG
EX772860       --> ..................................................
EY897507       --> ..................................................
EY913419       --> TGTTATGTCGGCGTCAAGGATGAATCATCGATGTGACATCTGTTCTAAAG
FD540394       --> TGTGATGTCGGCGTCAAGGATGAATCATCGATGTGACATCTGTTCTAAAG
FD947700       --> ..................................................
FD979869       --> TGTGATGTCGGCGTCAAGGATGAATCATCGATGTGACATCTGTTCTAAAG
FD980301       --> TGTGATGTCGGCGTCAAGGATGAATCATCGATGTGACATCTGTTCTAAAG
EV528624       --> ..................................................
EX747898       --> ..................................................

               601    -    651
UN21745        --> TGTTTTATAGTGGTCAGGCTTTGGGTGGTCACATGAGGTGTCATTGGGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY909652       <-- TGTTTTATAGTGGTCAGGCTTTGGGTGGTCACATGAGGTGTCATTGGGTT
FD943594       <-- TGTTTTATAGTGGTCAGGCTTTGGGCGGTCACATGAGGTGTCATTGGGTT
EX751979       <-- TGTTTTATAGTGGTCAGGCTTTGGGTGGTCACATGAGGTGTCATTGGGTT
FD536908       <-- TGTTTTATAGTGGTCAGGCTTTGGGTGGTCACATGAGGTGTCATTGGGTT
FD975843       <-- TGTTTTATAGTGGTCAGGCTTTGGGTGGTCACATGAGGTGTCATTGGGTT
EV548609       --> TGTTTTACAGTGGTCAGGCTTTGGGTGGTCACATGAGGTGTCATTGGGT.
EX772860       --> ..................................................
EY897507       --> ..................................................
EY913419       --> TGTTTTATAGTGGT....................................
FD540394       --> TGTTTTATAGTGG.....................................
FD947700       --> ..................................................
FD979869       --> TGTTTTATAGTGGTCAGGCTTTGGGTGGTCACATGAGGTGTCATTGGGTT
FD980301       --> TGTTTTACAGTGGTCAGGCTTTGGGTGGTCACATGAGGTGTCATTGGGTT
EV528624       --> ..................................................
EX747898       --> ..................................................

               651    -    701
UN21745        --> AAGGATAAGGAGAAGAAACAAGCTTCGACTGGTATCGATCTCAATGTTCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY909652       <-- AAGGATAAGGAGAAGAAACAAGCTTCGACTGGTATCGATCTCAATGTTCC
FD943594       <-- AAGGATAAGGAGAAGAAACAAGCTTCGACTGGTATCGATCTCAATGTTCC
EX751979       <-- AAGGATAAGGAGAAGAAACAAGCTTCGACTGGTATCGATCTCAATGTTCC
FD536908       <-- AAGGATAAGGAGAAGAAACAAGCTTCGACTGGTATCGATCTCAATGTTCC
FD975843       <-- GAGGATAAGGAGAAGAAACAAGCTTCGACTGGTATCGATCTCAATGTTCC
EV548609       --> ..................................................
EX772860       --> ..................................................
EY897507       --> ..................................................
EY913419       --> ..................................................
FD540394       --> ..................................................
FD947700       --> ..................................................
FD979869       --> GAGGATAAAGAGAAGAAACAAGCTTCGACTGGTATCGATCTCA-TGTTCC
FD980301       --> AAGGATAAGGAGAAGAAACAAGCTTCGACTGGTATCGATCTCAATGTTCC
EV528624       --> ..................................................
EX747898       --> ..................................................

               701    -    751
UN21745        --> TGCGTCGTCGACCAACTTGCAGCCCGGTTCTTCTTCAGACGCAGTGCCAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY909652       <-- TGCGTCGTCGACCAACTTGCAGCCCGGTTCTTCTTCAGACGCAGTGCCAG
FD943594       <-- TGCGTCGTCGACCAACTTGCAGCCCGGTTCTTCTTCAGACGCAGTGCCAG
EX751979       <-- TGCGTCGTCGACCAACTTGCAGCCCGGTTCTCTTTCAGACGCAGTGCCAG
FD536908       <-- TGCGTCGTCGACCAACTTGCAGCCCGGTTCTTCTTCAGACGCAGTGCCAG
FD975843       <-- TGCGTCGTCGACCAACTTGCAGCCCGGTTCTTCTTCAGACGCAGTGCCAG
EV548609       --> ..................................................
EX772860       --> ..................................................
EY897507       --> ..................................................
EY913419       --> ..................................................
FD540394       --> ..................................................
FD947700       --> ..................................................
FD979869       --> TGCGTCGTCGAC-AACTTGCAGCCCGGT-CTTCTTCAGACGCAGTGC-AG
FD980301       --> TGCGTCGTCGACCAACTTGCAGCCCGGTTCTTCTTCAGACGCAGTGCCAG
EV528624       --> ..................................................
EX747898       --> ..................................................

               751    -    801
UN21745        --> AGTCTTCTTTGGATCTTAAGTTACGACTCTGACATTATAATATCTTATGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY909652       <-- AGTCTTCTTTGGATCTTAAGTTACGACTCTGACATTATAATATCTTATGG
FD943594       <-- AGTCTTCTTTGGATCTTAAGTTACGACTCTGACATTATAATATCTTATGG
EX751979       <-- AGTCTTCTTTGGATCTTAAGTTACGACTCTGACATTATAATATCTTATGG
FD536908       <-- AGTCTTCTTTGGATCTTAAGTTACGACTCTGACATTATAATATCTTATGG
FD975843       <-- AGTCTTCTTTGGATCTTAAGTTACGACTCTGACATTATAATATCTTATGG
EV548609       --> ..................................................
EX772860       --> ..................................................
EY897507       --> ..................................................
EY913419       --> ..................................................
FD540394       --> ..................................................
FD947700       --> ..................................................
FD979869       --> AGTCTTCTTTGGATCT-AAG-TACGACTCTGACATatat...........
FD980301       --> AGTCTTCTTTGGATCTTAAGTTACGACTCTGACAT-ATAATATCTTATtg
EV528624       --> ..................................................
EX747898       --> ..................................................

               801    -    851
UN21745        --> GTATTGGTTTTTTTCTCTTTATGAAACTCTCTATTTTATGTGTGTGAGTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY909652       <-- GTATTGTTTTTTTTCTCTTTATGAAACTCTCTATTTTATGTGTGTGAGTC
FD943594       <-- GTATTGGTTTTTTTCTCTTTATGAAACTCTCTATTTTATGTGTGTGAGTC
EX751979       <-- GTATTGGTTTTTTTCTCTTTATGAAACTCTCTATTTTATGTGTGTGAGTC
FD536908       <-- GTATTGGTTTTTTTCTCTTTATGAAACTCTCTATTTTATGTGTGTGAGTC
FD975843       <-- GTATTGTTTTTTTTCTCTTTATGAAACTCTCTATTTTATGTGTGTGAGTC
EV548609       --> ..................................................
EX772860       --> ..................................................
EY897507       --> ..................................................
EY913419       --> ..................................................
FD540394       --> ..................................................
FD947700       --> ..................................................
FD979869       --> ..................................................
FD980301       --> ..................................................
EV528624       --> ..................................................
EX747898       --> ..................................................

               851    -    901
UN21745        --> ACACAGTATGACGATTTGTACGATGAATTTATACCATTGGGGGTATTGCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY909652       <-- ACACAGTATGACGATTTGTACGATGAATTTATACCATTGGGGGTATTGCA
FD943594       <-- ACGCAGTGTGACGATTTGTACGATGAATTTATACCATTGGGGGTATTGCA
EX751979       <-- ACACAGTGTGACGATTTGTACGATGAATTTATACCATTGGGGGTATTGCA
FD536908       <-- ACACAGTATGACGATTTGTACGATGAATTTATACCATTGGGGGTATTGCA
FD975843       <-- ACACAGTATGACGATTTGTACGATGAATTTATACCATTGGGGGTATTGCA
EV548609       --> ..................................................
EX772860       --> ..................................................
EY897507       --> ..................................................
EY913419       --> ..................................................
FD540394       --> ..................................................
FD947700       --> ..................................................
FD979869       --> ..................................................
FD980301       --> ..................................................
EV528624       --> ..................................................
EX747898       --> ..................................................

               901    -    951
UN21745        --> ATAATCTTATTTAAAACTTATTTGTTGACGAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY909652       <-- ATAATCTTA.......................
FD943594       <-- ATAATCTTATTTAAAACTTATTTGTTG.....
EX751979       <-- ATAATCTTATTTAAAACTTATTTGTTGACGAC
FD536908       <-- ATAATCTTATTTAAAACTTATTTGTTGACGgc
FD975843       <-- ATAA............................
EV548609       --> ................................
EX772860       --> ................................
EY897507       --> ................................
EY913419       --> ................................
FD540394       --> ................................
FD947700       --> ................................
FD979869       --> ................................
FD980301       --> ................................
EV528624       --> ................................
EX747898       --> ................................