Library    |     Search    |     Batch query    |     SNP    |     SSR  

Alignment for radish unigene UN21797

               1      -     51
UN21797        --> GGGTCAACGCCTGGTGTTGTTGGTAGTCTACGATCGTCGTCGGGGTCTGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY445075       <-- ..................................................
FY432220       <-- ..................................................
FY432336       <-- ..................................................
EY935942       <-- ..................................................
FD943344       <-- ..................................................
EV572149       <-- ..................................................
EY894106       <-- ..................................................
EV567159       --> GGGTCAACGCCTGGTGTTGTTGGTAGTCTACGATCGTCGTCGGGGTCCGC
EV570271       --> .................................ggGTCGTCGGGGTCTGC
EY940139       --> ..................................................
FD947387       --> ..................................................
EY913446       --> ..................................................
FD979151       --> ..................................................
EY912863       --> ..................................................
EX747342       --> ..................................................
FY444332       --> ..................................................
FY432947       --> ..................................................
FY448056       --> ..................................................
FY438595       --> ..................................................
EY897914       --> ..................................................

               51     -    101
UN21797        --> TTCTTCTTCCATACTAGTGGGTCACTCGTTTCTATACCCGTGAAAAAAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY445075       <-- ..................................................
FY432220       <-- ..................................................
FY432336       <-- ..................................................
EY935942       <-- ..................................................
FD943344       <-- ..................................................
EV572149       <-- ..................................................
EY894106       <-- ..................................................
EV567159       --> TTCTTCTTCCATACTAGTGGGTCACTCGTTTCTATACCCGTGAAAAAA-C
EV570271       --> TTCTTCTTCCATACTAGTGGGTCACTCGTTTCTATACCCGTGAAAAAA-C
EY940139       --> ...ggCTTCCATACTAGTGGGTCACTCGTTTCTATACCCGTGAAAAAAAC
FD947387       --> ...ggCTTCCATACTAGTGGGTCACTCGTTTCTATACCCGTGAAAAAAAC
EY913446       --> ........ggATACTAGTGGGTCACTCGTTTCCATACCCGTGAAAAAA-C
FD979151       --> .........gATACTAGTGGGTCACTCGTTTCTATACCCGTGAAAAAAAC
EY912863       --> ...................................ggCCGTGAAAAAAAC
EX747342       --> ......................................gggtgAAAAAAC
FY444332       --> .......................................ccgtgAAAAAC
FY432947       --> ................................................AC
FY448056       --> ..................................................
FY438595       --> ..................................................
EY897914       --> ..................................................

               101    -    151
UN21797        --> CCTAGCTCGCAAATATGACGAACCTCTCGAGATCCGTCGCATTGATCTCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY445075       <-- ..................................................
FY432220       <-- ..................................................
FY432336       <-- ..................................................
EY935942       <-- ..................................................
FD943344       <-- ..................................................
EV572149       <-- ..................................................
EY894106       <-- ..................................................
EV567159       --> CCTATCTCGCAAATATGACGAACCTCTCGAGATCCGTCGCATTGATCTCA
EV570271       --> CCTATCTCGCAAATATGACGAACCTCTCGAGATCCGTCGCATTGATCTCA
EY940139       --> CCTAGCTCGCAAATATGACGAACCTCTCGAGATCCGTCGCATTGATCTCA
FD947387       --> CCTAGCTCGCAAATATGACGAACCTCTCGAGATCCGTCGCATTGATCTCA
EY913446       --> CCTAGGTCGCAAATATGACGAACCTCTCGAGATCCGTCGCATTGATCTCA
FD979151       --> CCTAGCTCGCAAATATGACGAACCTCTCGAGATCCGTCGCATTGATCTCA
EY912863       --> CCTAGCTCGCAAATATGACGAACCTCTCGAGATCCGTCGCATTGATCTCA
EX747342       --> CCTATCTCGCAAATATGACGAACCTCTCGAGATCCGTCGCATTGATCTCA
FY444332       --> CCTAGCTCGCAA-TATGACGAACCTCTCTAGATCCGTCGCATTGATCTCA
FY432947       --> CCTAGCTCGCAAATATGACGAACCTCTCGAGATCCGTCGCATTGATCTCA
FY448056       --> ....................................TCGCATTGATCTCA
FY438595       --> ..................................................
EY897914       --> ..................................................

               151    -    201
UN21797        --> CTATTTCTTCTCCCATTGCTCAGCTTCTCTTTCTCCGTCGATAATCCGAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY445075       <-- ..................................................  Raphanus sativus cv GSK3-1
FY432220       <-- ..................................................  Raphanus sativus cv GSK3-1
FY432336       <-- ..................................................  Raphanus sativus cv GSK3-1
EY935942       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD943344       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EV572149       <-- ..................................................  Raphanus raphanistrum subsp. landra
EY894106       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EV567159       --> CTATTTCTTCTCCCATTGCTCAGCTTCTCTTTCTCCGTCGACAATCCGAC  Raphanus raphanistrum subsp. landra
EV570271       --> CTATTTCTTCTCCCATTGCTCAGCTTCTCTTTCTCCGTCGACAATCCGAC  Raphanus raphanistrum subsp. landra
EY940139       --> CTATTTCTTCTCCCATTGCTCAGCTTCTCTTTCTCCGTCGACAATCCGTC  Raphanus sativus cv Early Scarlet Globe
FD947387       --> CTATTTCTTCTCCCATTGCTCAGCTTCTCTTTCTCCGTCGACAATCCGAC  Raphanus sativus cv Early Scarlet Globe
EY913446       --> CTATTTCTTCTACCATTGCTCAGCTTCTCTTTCTCCGTCGACAATCCGAC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD979151       --> CTATTTCTTCTCCCATTGCTCAGCTTCTCTTTCTCCGTCGATAATCCGAC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY912863       --> CTATTTCTTCTCCCATTGCTCAGCATCTCTTTCTCCGTCGATAATCCGAC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX747342       --> CTATTTCTTCTCCCATTGCTCAGCTTCTCTTTCTCCGTCGACAATCCGAC  Raphanus raphanistrum subsp. maritimus
FY444332       --> CTATTTCTTCTCCCATTGCTCAGCTTCTCTTTCTCCGTCGATAATCCGAC  Raphanus sativus cv GSK3-1
FY432947       --> CTATTTCTTCTCCCATTGCTCAGCTTCTCTTTCTCCGTCGATAATCCGAC  Raphanus sativus cv GSK3-1
FY448056       --> CTATTTCTTCTCCCATTGCTCACCTTCTCTTTCTCCGTCGATAATCCGAC  Raphanus sativus cv GSK3-1
FY438595       --> ....TTCTTCTCCCATTGCTCAGCTTCTCTTTCTCCGTCGATAATCCGAC  Raphanus sativus cv GSK3-1
EY897914       --> ..................................................  Raphanus raphanistrum subsp. maritimus

               201    -    251
UN21797        --> GGATCGGCGGGTTCTGGTTCTTCTCGACGATCTATCACTCAAATCCTCTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY445075       <-- ..................................................
FY432220       <-- ..................................................
FY432336       <-- ..................................................
EY935942       <-- ..................................................
FD943344       <-- ..................................................
EV572149       <-- ..................................................
EY894106       <-- ..................................................
EV567159       --> GGATCGGCGGGTTCTGGTTCTTCTCGACGATCTATCACTCAAATCCTCTC
EV570271       --> GGATCGGCGGGTTCTGGTTCTTCTCGACGATCTATCACTCAAATCCTCTC
EY940139       --> GGATCGGCGGGTTCTGGTTCTTCTCGACGATCTATCACTCAAATCCTCTC
FD947387       --> GGATCGGCGGGTTCTGGTTCTTCTCGACGATCTATCACTCAAATCCTCTC
EY913446       --> GGATCGGCGGGTTCTGGTTCTTCTCGACGATCTATCACTCAAATCCTCTC
FD979151       --> GGATCGGCGGGTTCTGGTTCTTCTCGACGATTTATCACTCAAATCCTCTC
EY912863       --> GGATCGGCGGGTTCTGGTTCTTCTCGACGATTTATCACTCAAATCCTCTC
EX747342       --> GGATCGGCGGGTTCTGGTTCTTCTCGACGATCTATCACTCAAATCCTCTC
FY444332       --> GGATCGGCGGGTTCTGGTTCTTCTCGACGATCTATCACTCAAATCCTCTC
FY432947       --> GGATCGGCGGGTTCTGGTTCTTCTCGACGATCTATCACTCAAATCCTCTC
FY448056       --> GGATCGGCGGGTTCTGGTTCTTCTCGACGATCTATCACTCAAATCCTCTC
FY438595       --> GGATCGGCGGGTTCTGGTTCTTCTCGACGATCTATCACTCAAATCCTCTC
EY897914       --> ..................................................

               251    -    301
UN21797        --> ATTCCATCTTCTTCAACACTCTCAAATCCCGCGGATTCGATCTCGATTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY445075       <-- ..................................................
FY432220       <-- ..................................................
FY432336       <-- ..................................................
EY935942       <-- ..................................................
FD943344       <-- ..................................................
EV572149       <-- ..................................................
EY894106       <-- ..................................................
EV567159       --> ATTCCATCTTCTTCAACACTCTCAA-TCCCGCGGATTCGATCTCGATTTC
EV570271       --> ATTCCATCTTCTTCAACACTCTCAAATCCCGCGGATTCGATCTCGATTTC
EY940139       --> ATTCCATCTTCTTCAACACTCTCAAATCCCGCGGATTCGATCTCGATTTC
FD947387       --> ATTCCATCTTCTTCAACACTCTCAA-TCCCGCGGATTCGATCTCGATTTC
EY913446       --> ATTCTATCTTCTTCAACACTCTCAAATCCCGCGGATTCGATCTCGATTTC
FD979151       --> ATTCTATCTTCTTCAACACTCTCAAATCCCGTGGATTCGATCTCGATTTC
EY912863       --> ATTCTATCTTCTTCAACACTCTCAAATCCCGTGGATTCGATCTCGATTTC
EX747342       --> ATTCCATCTTCTTCAACACTCTCAAATCCCGCGGATTCGATCTCGATTTC
FY444332       --> ATTCCATCTTCTTCAACACTCTCAAATCCCGCGGATTCGATCTCGATTTC
FY432947       --> ATTCCATCTTCTTCAACACTCTCAAATCCCGCGGATTCGATCTCGATTTC
FY448056       --> ATTCCATCTTCTTCAACACTCTCAAATCCCGCGGATTCGATCTCGATTTC
FY438595       --> ATTCCATCTTCTTCAACACTCTCAAATCCCGCGGATTCGATCTCGATTTC
EY897914       --> ..................................................

               301    -    351
UN21797        --> AAGCTAGCGGAAGATTCGAAGCTCGCGCTTCAACGGTACGGCCAGTACTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY445075       <-- ..................................................  Raphanus sativus cv GSK3-1
FY432220       <-- ..................................................  Raphanus sativus cv GSK3-1
FY432336       <-- ..................................................  Raphanus sativus cv GSK3-1
EY935942       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD943344       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EV572149       <-- ..................................................  Raphanus raphanistrum subsp. landra
EY894106       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EV567159       --> AAGCTAGCGGAAGATTCGAAGCTCGCGCTTCAACGGTACGGCCAGTACTT  Raphanus raphanistrum subsp. landra
EV570271       --> AAGCTGGCGGAAGATTCGAAGCTCGCGCTTCAACGGTACGGCCAGTACTT  Raphanus raphanistrum subsp. landra
EY940139       --> AAGCTAGCGGAAGATTCGAAGCTCGCGCTTCAACGGTACGGCCAGTACTT  Raphanus sativus cv Early Scarlet Globe
FD947387       --> AAGCTAGCGGAAGATTCGAAGCTCGCGCTTCAACGGTACGGCCAGTACTT  Raphanus sativus cv Early Scarlet Globe
EY913446       --> AAGCTAGCTGATGATTCGAAGCTCGCGCTTCAACGGTACGGCCAGTACTT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD979151       --> AAGCTAGCGGAAGATTCGAAGCTCGCGCTTCAACGGTACGGCCAGTACTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY912863       --> AAGCTAGCGGAAGATTCGAAGCTCGCGCTTCAACGATACGGCCAGTACTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX747342       --> AAGCTAGCGGAAGATTCGAAGCTCGCGCTTCAACGGTACGGCCAGTACT-  Raphanus raphanistrum subsp. maritimus
FY444332       --> AAGCTAGCGGAAGACTCGAAGCTCGCGCTTCAACGGTACGGCCAGTACTT  Raphanus sativus cv GSK3-1
FY432947       --> AAGCTAGCGGAAGACTCGAAGCTCGCGCTTCAACGGTACGGCCAGTACTT  Raphanus sativus cv GSK3-1
FY448056       --> AAGCTAGCGGAAGACTCGAAGCTCGCGCTTCAACGGTACGGCCAGTACTT  Raphanus sativus cv GSK3-1
FY438595       --> AAGCTAGCGGAAGACTCGAAGCTCGCGCTTCAACGGTACGGCCAGTACTT  Raphanus sativus cv GSK3-1
EY897914       --> ..................................................  Raphanus raphanistrum subsp. maritimus

               351    -    401
UN21797        --> GTACGACGGGCTCATCATTTTCGCCCCGTCCACAGAGCGGTTTGGAGGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY445075       <-- ..................................................
FY432220       <-- ..................................................
FY432336       <-- ..................................................
EY935942       <-- ..................................................
FD943344       <-- ..................................................
EV572149       <-- ..................................................
EY894106       <-- ..................................................
EV567159       --> GTACGACGGGCTCATCATTTTCGCCCCGTCCACAGAGCGGCTTGGAGGAT
EV570271       --> GTACGACGGGCTCATCATTTTCGCCCCGTCCACAGAGCGGCTTGGAGGAT
EY940139       --> GTACGACGGGCTCATCATTTTCGCCCCGTCCACAGAGCGGTTTGGAGGAT
FD947387       --> GTACGACGGGCTCATCATTTTCGCCCCGTCCACAGAGCGGTTTGGAGGAT
EY913446       --> GTACGACGGGCTCATCATTTTCGCCCCGTCCACAGAGCGGTTTGGAGGAT
FD979151       --> GTACGACGGGCTCATCATTTTCGCCCCGTCCACAGAGCGGTTTGGAGGAT
EY912863       --> GTACGACGGGCTCATCATTTTCGCCCCGTCCACAGAGCGGTTTGGAGGAT
EX747342       --> GTACGACGGGCTCATCATTTTCGCCCCGTCCACAGAGCGGCTTGGAGGAT
FY444332       --> GTACGACGGGCTCATCATTTTCGCCCCGTCCACAGAGCGGTTTGGAGGAT
FY432947       --> GTACGACGGGCTCATCATTTTCGCCCCGTCCACAGAGCGGTTTGGAGGAT
FY448056       --> GTACGACGGGCTCATCATTTTCGCCCCGTCCACAGAGCGGTTTGGAGGAT
FY438595       --> GTACGACGGGCTCATCATTTTCGCCCCGTCCACAGAGCGGTTTGGAGGAT
EY897914       --> ..................................................

               401    -    451
UN21797        --> CGTTGGATTCGAAATCCATAGCTGATTTCGTTGATTCGGGTCGTGACTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY445075       <-- ..................................................  Raphanus sativus cv GSK3-1
FY432220       <-- ..................................................  Raphanus sativus cv GSK3-1
FY432336       <-- ..................................................  Raphanus sativus cv GSK3-1
EY935942       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD943344       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EV572149       <-- ..................................................  Raphanus raphanistrum subsp. landra
EY894106       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EV567159       --> CGTTGGATTCGAAATCGATAGCTGATTTCGTTGATTCGGGTCGGGACTTG  Raphanus raphanistrum subsp. landra
EV570271       --> CGTTGGATTCGAAATCGATAGCTGATTTCGTTGATTCGGGTCGGGACTTG  Raphanus raphanistrum subsp. landra
EY940139       --> CGTTGGATTCGAAATCCATAGCTGATTTCGTTGATTCGGGTCGTGACTTG  Raphanus sativus cv Early Scarlet Globe
FD947387       --> CGTTGGATTCGAAATCCATAGCTGATTTCGTTGATTCGGGTCGTGACTTG  Raphanus sativus cv Early Scarlet Globe
EY913446       --> CGTTGGATTCGAAATCGATAGCTGATTTCGTTGATTCGGGTCGTGACTTG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD979151       --> CATTGGATTCGAAATCCATAGCTGATTTCGTTGATTCGGGTCGTAACTTG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY912863       --> CATTGGATTCGAAATCCATAGCTGATTTCGTTGATTCGGGTCGTGACTTG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX747342       --> CGTTGGATTCGAAATCGATAGCTGATTTCGTTGATTCGGGTCGGGACTTG  Raphanus raphanistrum subsp. maritimus
FY444332       --> CGTTGGATTCGAAATCCATAGCTGATTTCGTTGATTCGGGTCGTGACTTG  Raphanus sativus cv GSK3-1
FY432947       --> CGTTGGATTCGAAATCCATAGCTGATTTCGTTGATTCGGGTCGTGACTTG  Raphanus sativus cv GSK3-1
FY448056       --> CGTTGGATTCGAAATCCATAGCTGATTTCGTTGATTCGGGTCGTGACTTG  Raphanus sativus cv GSK3-1
FY438595       --> CGTTGGATTCGAAATCCATAGCTGATTTCGTTGATTCGGGTCGTGACTTG  Raphanus sativus cv GSK3-1
EY897914       --> ..................................................  Raphanus raphanistrum subsp. maritimus

               451    -    501
UN21797        --> ATCTTATCGGCGGATACTTCTGCTTCTGATCTGATTCGGGGGATTGCCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY445075       <-- ..................................................  Raphanus sativus cv GSK3-1
FY432220       <-- ..................................................  Raphanus sativus cv GSK3-1
FY432336       <-- ..................................................  Raphanus sativus cv GSK3-1
EY935942       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD943344       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EV572149       <-- ..................................................  Raphanus raphanistrum subsp. landra
EY894106       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EV567159       --> ATCTTATCGGCGGATACTTCTGCTTCTGATCTGATTCGGGGGATTGCCTT  Raphanus raphanistrum subsp. landra
EV570271       --> ATCTTATCGGCGGATACTTCTGCTTCTGATCTGATTCGGGGGATTGCCTT  Raphanus raphanistrum subsp. landra
EY940139       --> ATCTTATCGGCGGATACTTCTGCTTCTGATCTGATTCGGGGGATTGCCAC  Raphanus sativus cv Early Scarlet Globe
FD947387       --> ATCTTATCGGCGGATACTTCTGCTTCTGATCTGATTCGGGGGATTGCCAC  Raphanus sativus cv Early Scarlet Globe
EY913446       --> ATCTTATCGGCGGATACTTCTGCTTCCGATCTGATTCGGGGGATTGCCAC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD979151       --> ATCTTATCGGCGGATACTTCTGCTTCTGATCTGATTCGGGGGATTGCCTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY912863       --> ATCTTATCGGCGGATACTTCTGCTTCTGATCTGATTCGGGGGATTGCCTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX747342       --> ATCTTATCGGCGGATACTTCTGCTTCTGATCTGATTCGGGGGATTGCCTT  Raphanus raphanistrum subsp. maritimus
FY444332       --> ATCTTATCGGCGGATACTTCTGCTTCTGATCTGATTCGGGGGATTGCCTT  Raphanus sativus cv GSK3-1
FY432947       --> ATCTTATCGGCGGATACTTCTGCTTCTGATCTGATTCGGGGGATTGCCTT  Raphanus sativus cv GSK3-1
FY448056       --> ATCTTATCGGCGGATACTTCTGCTTCTGATCTGATTCGGGGGATTGCCTT  Raphanus sativus cv GSK3-1
FY438595       --> ATCTTATCGGCGGATACTTCTGCTTCTGATCTGATTCGGGGGATTGCCTT  Raphanus sativus cv GSK3-1
EY897914       --> ..................................................  Raphanus raphanistrum subsp. maritimus

               501    -    551
UN21797        --> AGAGTGTGGGGTTGATTTTGATGAGGATTCTTCGGCGATGGTTATTGATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY445075       <-- ..................................................  Raphanus sativus cv GSK3-1
FY432220       <-- ..................................................  Raphanus sativus cv GSK3-1
FY432336       <-- ..................................................  Raphanus sativus cv GSK3-1
EY935942       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD943344       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EV572149       <-- ..................................................  Raphanus raphanistrum subsp. landra
EY894106       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EV567159       --> GGAGTGTGGGGTTGATTTTGACGAGGATTCTTCGGCTATGGTTATTGATC  Raphanus raphanistrum subsp. landra
EV570271       --> GGAGTGTGGGGTTGATTTTGACGAGGATTCTTCGGCTATGGTTATTGATC  Raphanus raphanistrum subsp. landra
EY940139       --> AGAGTGTGGGGTTGATTTTGATGAGGATTCTTCGGCGATGGTTATTGATC  Raphanus sativus cv Early Scarlet Globe
FD947387       --> AGAGTGTGGGGTTGATTTTGATGAGGATTCTTCGGCGATGGTTATTGATC  Raphanus sativus cv Early Scarlet Globe
EY913446       --> AGAGTGTGGGGTTGATTTTGATGAGGATTCTTCGGCTATGGTTATTGATC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD979151       --> GGAGTGTGGGGTTGATTTTGATGAGGATTCTTCGGCGATGGTTATTGATC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY912863       --> GGAGTGTGGGGTTGATTTTGATGAGGATTCTTCGGCGATGGTTATTGATC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX747342       --> GGAGTGTGGGGTTGATTTTGACGAGGATTCTTCGGCTATGGTTATTGATC  Raphanus raphanistrum subsp. maritimus
FY444332       --> AGAGTGTGGGGTTGATTTTGATGAGGATTCTTCGGCGATGGTTATTGATC  Raphanus sativus cv GSK3-1
FY432947       --> AGAGTGTGGGGTTGATTTTGATGAGGATTCTTCGGCGATGGTTATTGATC  Raphanus sativus cv GSK3-1
FY448056       --> AGAGTGTGGGGTTGATTTTGATGAGGATTCTTCGGCGATGGTTATTGATC  Raphanus sativus cv GSK3-1
FY438595       --> AGAGTGTGGGGTTGATTTTGATGAGGATTCTTCGGCGATGGTTATTGATC  Raphanus sativus cv GSK3-1
EY897914       --> ..................................................  Raphanus raphanistrum subsp. maritimus

               551    -    601
UN21797        --> ACTCCAGCTTCTCTGTCTCCGATGTTGATGGAGACCACACCTTGATTGCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY445075       <-- ..................................................  Raphanus sativus cv GSK3-1
FY432220       <-- ..................................................  Raphanus sativus cv GSK3-1
FY432336       <-- ..................................................  Raphanus sativus cv GSK3-1
EY935942       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD943344       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EV572149       <-- ..................................................  Raphanus raphanistrum subsp. landra
EY894106       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EV567159       --> ATTCCAGCTTCTCTGTCTCTGATGTTGATGGAGACCATACCTTGATTGCT  Raphanus raphanistrum subsp. landra
EV570271       --> ATTCCAGCTTCTCTGTCTCTGATGTTGATGGAGACCATACCTTGATTGCT  Raphanus raphanistrum subsp. landra
EY940139       --> ACTCCAGCTTCTCTGTCTCCGATGTTGATGGAGACCACACCTTGATTGCT  Raphanus sativus cv Early Scarlet Globe
FD947387       --> ACTCCAGCTTCTCTGTCTCCGATGTTGATGGAGACCACACCTTGATTGCT  Raphanus sativus cv Early Scarlet Globe
EY913446       --> ATTCCAGCTTCTCTGTCTCTGATGTTGATGGAGACCACACCTTGATTGCT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD979151       --> ACTCCAGCTTCTCTGTCTCCGATGTTGATGGAGACCACACCTTGATTGCT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY912863       --> ACTCCAGCTTCTCTGTCTCCGATGTTGATGGAGACCACACCTTGATTGCT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX747342       --> ATTCCAGCTTCTCTGTCTCTGATGTTGATGGAGACCATACCTTGATTGCT  Raphanus raphanistrum subsp. maritimus
FY444332       --> ACTCCAGCTTCTCTGTCTCCGATGTTGATGGAGACCACACCTTGATTGCT  Raphanus sativus cv GSK3-1
FY432947       --> ACTCCAGCTTCTCTGTCTCCGATGTTGATGGAGACCACACCTTGATTGCT  Raphanus sativus cv GSK3-1
FY448056       --> ACTCCAGCTTCTCTGTCTCCGATGTTGATGGAGACCACACCTTGATTGCT  Raphanus sativus cv GSK3-1
FY438595       --> ACTCCAGCTTCTCTGTCTCCGATGTTGATGGAGACCACACCTTGATTGCT  Raphanus sativus cv GSK3-1
EY897914       --> ..................................................  Raphanus raphanistrum subsp. maritimus

               601    -    651
UN21797        --> GCTGACGATTTAGTTAAATCAAATGTCATTGTAGGAAAGACCAAGATCGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY445075       <-- ..................................................  Raphanus sativus cv GSK3-1
FY432220       <-- ..................................................  Raphanus sativus cv GSK3-1
FY432336       <-- ..................................................  Raphanus sativus cv GSK3-1
EY935942       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD943344       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EV572149       <-- ..................................................  Raphanus raphanistrum subsp. landra
EY894106       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EV567159       --> GCTGACGATTTAGTTAAATCAAATGTCATTCTAGGAAAAACCAAGATTGA  Raphanus raphanistrum subsp. landra
EV570271       --> GCTGACGATTTAGTTAAATCAAATGTCATTCTAGGAAAAACCAAGATTGA  Raphanus raphanistrum subsp. landra
EY940139       --> GCTGACGATTTAGTTAAATCAAATGTCATTGTAGGAAAGACCAAGATCGA  Raphanus sativus cv Early Scarlet Globe
FD947387       --> GCTGACGATTTAGTTAAATCAAATGTCATTGTAG-AAAGACCAAGATCGA  Raphanus sativus cv Early Scarlet Globe
EY913446       --> GCTGACGATTTAGTTAACTCAAATGTCATTGTAGGAAAAACCAAGATCGA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD979151       --> GCTGACGATTTAGTTAAATCAAATGTCATTGTAGGAAAAACCAAGATCGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY912863       --> GCTGACGATTTAGTTAAATCAAATGTCATTGTAGGAAAAACCAAGATCGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX747342       --> GCTGACGATTTAGTTAAATCAAATGTCATTCTAGGAAAAACCAAGATTGA  Raphanus raphanistrum subsp. maritimus
FY444332       --> GCTGACGATTTAGTTAAATCAAATGTCATTGTAGGAAAGACCAAGATCGA  Raphanus sativus cv GSK3-1
FY432947       --> GCTGACGATTTAGTTAAATCAAATGTCATTGTAGGAAAGACCAAGATCGA  Raphanus sativus cv GSK3-1
FY448056       --> GCTGACGATTTAGTTAAATCAAATGTCATTGTAGGAAAGACCAAGATCGA  Raphanus sativus cv GSK3-1
FY438595       --> GCTGACGATTTAGTTAAATCAAATGTCATTGTAGGAAAGACCAAGATCGA  Raphanus sativus cv GSK3-1
EY897914       --> ..................................................  Raphanus raphanistrum subsp. maritimus

               651    -    701
UN21797        --> GGCTCCTGTGCTCTTCAGAGGGGTTGCACATTCATTGAACCCTACCAACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY445075       <-- ..................................................
FY432220       <-- ..................................................
FY432336       <-- ..................................................
EY935942       <-- ..................................................
FD943344       <-- ..................................................
EV572149       <-- ..................................................
EY894106       <-- ..................................................
EV567159       --> GGCTCCTGTGCTCTTCAGAGGGGTTGCACATTCATTGAACCCTACTAACA
EV570271       --> GGCTCCTGTGCTCTTCAGAGGGGTTGCACATTCATTGAACCCTACTAACA
EY940139       --> GGCTCCTGTGCTCTTCAGAGGGGTTGCACATTCATTGAACCCTACCAACA
FD947387       --> GGCTCCTGTGCTC.....................................
EY913446       --> GGCTCCAGTGCTCTTCAGAGGGGTTGCACATTCATTGAACCCTACCAACA
FD979151       --> GGCTCCTGTGCTCTTCAGAGGGGTTGCACATTCATTGAACCCTACCAACA
EY912863       --> GGCTCCTGTGCTCTTCAGAGGGGTTGCACATTCATTGAACCCTACCAACA
EX747342       --> GGCTCCTGTGCTCTTCAGAGGGGTTGCACATTCATTGAACCCTACTAACA
FY444332       --> GGCTCCTGTGCTCTTCAGAGGGGTTGCACATTCATTGAACCCTACCAACA
FY432947       --> GGCTCCTGTGCTCTTCAGAGGGGTTGCACATTCATTGAACCCTACCAACA
FY448056       --> GGCTCCTGTGCTCTTCAGAGGGGTTGCACATTCATTGAACCCTACCAACA
FY438595       --> GGCTCCTGTGCTCTTCAGAGGGGTTGCACATTCATTGAACCCTACCAACA
EY897914       --> ..................................................

               701    -    751
UN21797        --> ATCTGGTTTTGAAAGTTCTTTCAGCTTCTCCCTCAGCTTATTCTGCTAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY445075       <-- ..................................................
FY432220       <-- ..................................................
FY432336       <-- ..................................................
EY935942       <-- ..................................................
FD943344       <-- ..................................................
EV572149       <-- ..................................................
EY894106       <-- ..................................................
EV567159       --> ATCTGGTTTTGAAAGTTCTTTCAGCTTCTCCCTCAGCTTATTCTGCTAAC
EV570271       --> ATCTGGTTTTGAAAGTTCTTTCAGCTTCTCCCTCAGCTTATTCTGCTAAC
EY940139       --> ATCTGGTTTTGAAAGTTCTTTCAGCTTCTCCCTCAGCTTATTCTGCTAAC
FD947387       --> ..................................................
EY913446       --> ATCTGGTTTTGAAAGTTCTTTCAGCTTCTCCCTCAGCTTATTCTGCTAAC
FD979151       --> ATCTGGTTTTGAA-GTTCTTTCAGCTTCTCCCTCCGCTTATTCTGCTA-C
EY912863       --> ATCTGGTTTTGAAAGTTCTTTCAGCTTCTCCCTCCGCTTATTCTGCTAAC
EX747342       --> ATCTGGTTTTGAAAGTTCTTTCAGCTTCTCCCTCAGCTTATTCTGCTAAC
FY444332       --> ATCTGGTTTTGAAAGTTCTTTCAGCTTCTCCCTCAGCTTATTCTGCTAAC
FY432947       --> ATCTGGTTTTGAAAGTTCTTTCAGCTTCTCCCTCAGCTTATTCTGCTAAC
FY448056       --> ATCTGGTTTTGAAAGTTCTTTCAGCTTCTCCCTCAGCTTATTCTGCTAAC
FY438595       --> ATCTGGTTTTGAAAGTTCTTTCAGCTTCTCCCTCAGCTTATTCTGCTAAC
EY897914       --> ..................................................

               751    -    801
UN21797        --> CCGAGCTCGAAGTTGTCGAGTCCCCCTCAGCTCACTGGGTCTGCTATTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY445075       <-- ...........GTTGTCGAGTCCCCCTCAGCTCACTGGGTCTGCTATTTC  Raphanus sativus cv GSK3-1
FY432220       <-- .............................GCTCACTGGGTCTGCTATTTC  Raphanus sativus cv GSK3-1
FY432336       <-- .............................GCTCACTGGGTCTGCTATTTC  Raphanus sativus cv GSK3-1
EY935942       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD943344       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EV572149       <-- ..................................................  Raphanus raphanistrum subsp. landra
EY894106       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EV567159       --> CCGAGCTCGAAGTTGTCGAGTCCCCCTCAGCTAACTGGGTCTGCTATTTC  Raphanus raphanistrum subsp. landra
EV570271       --> CCGAGCTCGAAGTTGTCGAGTCCCC-TCAGCTAACTGGGTCTGCTATTTC  Raphanus raphanistrum subsp. landra
EY940139       --> CCGAGCTCGAAGT-GTCGAGTCCCCCTCAGCTCACTGGGTCTGCTGTTTC  Raphanus sativus cv Early Scarlet Globe
FD947387       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EY913446       --> C-GAGCTCGAAGT-GTCGAGTCCCC-TCAGCTCACTGGGTCTGCTATTTC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD979151       --> CCGAGCTC..........................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY912863       --> CCGAGCTCGAAGTTGTCGAGTCCCC-TCAGCTCACTGGGTCTGCTATTTC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX747342       --> CCGAGCTCGAAGTTGTCGAGTCCCC-TCAGCTAACTGGGTCTGCTATTTC  Raphanus raphanistrum subsp. maritimus
FY444332       --> CCGAGCTCGAAGTTGTCGAGTCCCCCTCAGCTCACTGGGTCTGCTATTTC  Raphanus sativus cv GSK3-1
FY432947       --> CCGAGCTCGAAGTTGTCGAGTCCCCCTCAGCTCACTGGGTCTGCTATTTC  Raphanus sativus cv GSK3-1
FY448056       --> CCGAGCTCGAAGTTGTCGAGTCCCCCTCAGCTCACTGGGTCTGCTATTTC  Raphanus sativus cv GSK3-1
FY438595       --> CCGAGCTCGAAGTTGTCGAGTCCCCCTCAGCTCACTGGGTCTGCTATTTC  Raphanus sativus cv GSK3-1
EY897914       --> ..................................................  Raphanus raphanistrum subsp. maritimus

               801    -    851
UN21797        --> GCTAGTGTCGGTCATGCAGCCAAGGAACAATGCTAGGGTTGTGATCTCAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY445075       <-- GCTAGTGTCGGTCATGCAGGCCAGGAACAATGCTAGGGTTGTGATCTCAG
FY432220       <-- GCTAGTGTCGGTCATGCAGGCCAGGAACAATGCTAGGGTTGTGATCTCAG
FY432336       <-- GCTAGTGTCGGTCATGCAGGCCAGGAACAATGCTAGGGTTGTGATCTCAG
EY935942       <-- .CTAGTGTCGGTCATGCAGGCCAGGAACAATGCTAGGGTTGTGATCTCAG
FD943344       <-- ...............................................CAG
EV572149       <-- ..................................................
EY894106       <-- ..................................................
EV567159       --> GCTAGTTTCGGTCAT...................................
EV570271       --> GCTAGTTTCGGTCATGCAGCCAgacatgc.....................
EY940139       --> GCTAGTGTCGGTCATGCAGCCAggacatgc....................
FD947387       --> ..................................................
EY913446       --> GCTAGTG...........................................
FD979151       --> ..................................................
EY912863       --> GCTAGT............................................
EX747342       --> ACTAGT............................................
FY444332       --> GCTAGTGTCGGTCATGCAGGCCAGGAACAATGCTAGGGTTGTGATCTCAG
FY432947       --> GCTAGTGTCGGTCATGCAGGCCAGGAACAATGCTAGGGTTGTGATCTCAG
FY448056       --> GCTAGTGTCGGTCATGCAGGCCAGGAACAATGCTAGGGTTGTGATCTCAG
FY438595       --> GCTAGTGTCGGTCATGCAGGCCAGGAACAATGCTAGGGTTGTGATCTCAG
EY897914       --> ..................................................

               851    -    901
UN21797        --> GCTCGTTGCAGATGTTTAGCGACAAGTTATTCAGATCTGGTGTCCAGAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY445075       <-- GCTCGTTGCAGATGTTTAGCGACAAGTTATTCAGATCTGGTGTCCAGAAA
FY432220       <-- GCTCGTTGCAGATGTTTAGCGACAAGTTATTCAGATCTGGTGTCCAGAAA
FY432336       <-- GCTCGTTGCAGATGTTTAGCGACAAGTTATTCAGATCTGGTGTCCAGAAA
EY935942       <-- GCTCGTTGCAGATGTTTAGCGACAAGTTATTCAGATCTGGTGTCCAGAAA
FD943344       <-- GCTCGTTGCAGATGTTTAGCGACAAGTTATTCAGATCTGGCGTCCAGAAA
EV572149       <-- ..................................................
EY894106       <-- ..................................................
EV567159       --> ..................................................
EV570271       --> ..................................................
EY940139       --> ..................................................
FD947387       --> ..................................................
EY913446       --> ..................................................
FD979151       --> ..................................................
EY912863       --> ..................................................
EX747342       --> ..................................................
FY444332       --> GCTCGTTGCAGATGTTTAGCGACAAGTTATTCAGATCTGGTGTCCAGAAA
FY432947       --> GCTCGTTGCAGATGTTTAGCGACAAGTTATTCAGATCTGGTGTCCAGAAA
FY448056       --> GCTCGTTGCAGATGTTTAGCGACAAGTTATTCAGATCTGGTGTCCAGAAA
FY438595       --> GCTCGTTGCAGATGTTTAGCGACAAGTTATTCAGATCTGGTGTCCAGAAA
EY897914       --> ..................................................

               901    -    951
UN21797        --> GCTGGGAGTCCGAACAAATATGAAAAATCTGGCAACGAACAGTTCGTGAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY445075       <-- GCTGGGAGTCCGAACAAATATGAAAAATCTGGCAACGAACAGTTCGTGAC
FY432220       <-- GCTGGGAGTCCGAACAAATATGAAAAATCTGGCAACGAACAGTTCGTGAC
FY432336       <-- GCTGGGAGTCCGAACAAATATGAAAAATCTGGCAACGAACAGTTCGTGAC
EY935942       <-- GCTGGGAGTCCGAACAAATATGAAAAATCTGGCAACGAACAGTTCGTGAC
FD943344       <-- GCTGGGAGTCCGAACAAATATGAAAAATCTGGCAACGAACAGTTCGTGAC
EV572149       <-- ....GGAGTCCAAACAAATATGAAAAATCTGGCAACGAACAGTTTGTGAC
EY894106       <-- ..................................................
EV567159       --> ..................................................
EV570271       --> ..................................................
EY940139       --> ..................................................
FD947387       --> ..................................................
EY913446       --> ..................................................
FD979151       --> ..................................................
EY912863       --> ..................................................
EX747342       --> ..................................................
FY444332       --> GCTGGGAGTCCGAACAAATATGAAAAATCTGGCAACGAACAGTTCGTGAC
FY432947       --> GCTGGGAGTCCGAACAAATATGAAAAATCTGGC.................
FY448056       --> GCTGGGAGTCCGAACAAATATGAAAAATCTG...................
FY438595       --> GCTGGGAGTCCGAACAAATATGAAAAATCTGGCAACGAACAGTTCGTGAC
EY897914       --> ..................................................

               951    -   1001
UN21797        --> TGAACTAAGCAAATGGGTCTTCCACGAAAGAGGGCATTTGAAGGCTGGTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY445075       <-- TGAACTAAGCAAATGGGTCTTCCACGAAAGAGGGCATTTGAAGGCTGGTA
FY432220       <-- TGAACTAAGCAAATGGGTCTTCCACGAAAGAGGGCATTTGAAGGCTGGTA
FY432336       <-- TGAACTAAGCAAATGGGTCTTCCACGAAAGAGGGCATTTGAAGGCTGGTA
EY935942       <-- TGAACTAAGCAAATGGGTCTTCCACGAAAGAGGGCATTTGAAGGCTGGTA
FD943344       <-- TGAACTAAGCAAATGGGTCTTCCACGAAAGAGGGCATTTGAAGGCTGGTA
EV572149       <-- TGAACTAAGCAAATGGGTCTTCCACGAAAGAGGCCATCTGAAGGCTGGTA
EY894106       <-- ..................................................
EV567159       --> ..................................................
EV570271       --> ..................................................
EY940139       --> ..................................................
FD947387       --> ..................................................
EY913446       --> ..................................................
FD979151       --> ..................................................
EY912863       --> ..................................................
EX747342       --> ..................................................
FY444332       --> TGAACTA...........................................
FY432947       --> ..................................................
FY448056       --> ..................................................
FY438595       --> TGAACTAAGCAAATGGGTCTTCCACGAAAGAGGGCATTTGAAGGCTGGTA
EY897914       --> ..................................................

               1001   -   1051
UN21797        --> GTCTTGTACACCACAGGGTTGGAGAAACAGATGAGCCAGCAATATACAGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY445075       <-- GTCTTGTACACCACAGGGTTGGAGAAACAGATGAGCCAGCAATATACAGG
FY432220       <-- GTCTTGTACACCACAGGGTTGGAGAAACAGATGAGCCAGCAATATACAGG
FY432336       <-- GTCTTGTACACCACAGGGTTGGAGAAACAGATGAGCCAGCAATATACAGG
EY935942       <-- GTCTTGTACACCACAGGGTTGGAGAAACAGATGAGCCAGCAATATACAGG
FD943344       <-- GTCTTGTACACCACAGGGTTGGAGAAACAGCTGAGCCAGCAATATACAGG
EV572149       <-- GTCTTGTACACCATAGAGTTGGAGAAACAGATGAGCCAGCAATATACAGG
EY894106       <-- ..................................................
EV567159       --> ..................................................
EV570271       --> ..................................................
EY940139       --> ..................................................
FD947387       --> ..................................................
EY913446       --> ..................................................
FD979151       --> ..................................................
EY912863       --> ..................................................
EX747342       --> ..................................................
FY444332       --> ..................................................
FY432947       --> ..................................................
FY448056       --> ..................................................
FY438595       --> GTCTTGTACACCACAGGGTTGGAGAAACAGATGAGCCAGCAATATACAGG
EY897914       --> ..................................................

               1051   -   1101
UN21797        --> ATAAAGGATGACCTGGAATTTTCGGTGGAGATACTGGAGTGGTCAGGGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY445075       <-- ATAAAGGATGACCTGGAATTTTCGGTGGAGATACTGGAGTGGTCAGGGAA
FY432220       <-- ATAAAGGATGACCTGGAATTTTCGGTGGAGATACTGGAGTGGTCAGGGAA
FY432336       <-- ATAAAGGATGACCTGGAATTTTCGGTGGAGATACTGGAGTGGTCAGGGAA
EY935942       <-- ATAAAGGATGACCTGGAATTTTCGGTGGAGATACTGGAGTGGTCAGGGAA
FD943344       <-- ATAAAGGATGACCTGGAATTTTCGGTGGAGATACTGGAGTGGTCAGGGAA
EV572149       <-- ATAAAGGATGACCTGGAATTTTCGGTGGAGATACTGGAGTGGTCAGGGAA
EY894106       <-- ..................................................
EV567159       --> ..................................................
EV570271       --> ..................................................
EY940139       --> ..................................................
FD947387       --> ..................................................
EY913446       --> ..................................................
FD979151       --> ..................................................
EY912863       --> ..................................................
EX747342       --> ..................................................
FY444332       --> ..................................................
FY432947       --> ..................................................
FY448056       --> ..................................................
FY438595       --> ATAA..............................................
EY897914       --> ..................................................

               1101   -   1151
UN21797        --> GAGCTGGGAACCGTATGTAGCTGATGATGTGCAGGTTCAGTTTTACATGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY445075       <-- GAGCTGGGAACCGTATGTAGCTAATGATGTGCAGGTTCAGTTTTACATGA  Raphanus sativus cv GSK3-1
FY432220       <-- GAGCTGGGAACCGTATGTAGCTAATGATGTGCAGGTTCAGTTTTACATGA  Raphanus sativus cv GSK3-1
FY432336       <-- GAGCTGGGAACCGTATGTAGCTAATGATGTGCAGGTTCAGTTTTACATGA  Raphanus sativus cv GSK3-1
EY935942       <-- GAGCTGGGAACCGTATGTAGCTGATGATGTGCAGGTTCAGTTTTACATGA  Raphanus sativus cv Early Scarlet Globe
FD943344       <-- GAGCTGGGAACCGTATGTAGCTGATGATGTGCAGGTTCAGTTTTACATGA  Raphanus sativus cv Early Scarlet Globe
EV572149       <-- GAGCTGGGAACCGTATGTAGCCGATGATGTGCAGGTTCAGTTTTACATGA  Raphanus raphanistrum subsp. landra
EY894106       <-- .....GGGAACCGTATGTAGCCGATGATGTGCAGGTTCAGTTTTACATGA  Raphanus raphanistrum subsp. maritimus
EV567159       --> ..................................................  Raphanus raphanistrum subsp. landra
EV570271       --> ..................................................  Raphanus raphanistrum subsp. landra
EY940139       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD947387       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EY913446       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD979151       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY912863       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX747342       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FY444332       --> ..................................................  Raphanus sativus cv GSK3-1
FY432947       --> ..................................................  Raphanus sativus cv GSK3-1
FY448056       --> ..................................................  Raphanus sativus cv GSK3-1
FY438595       --> ..................................................  Raphanus sativus cv GSK3-1
EY897914       --> .....GGGAACCGTATGTAGCCGATGATGTGCAGGTTCAGTTTTACATGA  Raphanus raphanistrum subsp. maritimus

               1151   -   1201
UN21797        --> TGAGCCCATATGTTCTGAAAACCTTGTCAACAGACAAGAAGGGTATGTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY445075       <-- TGAGCCCATATGTTCTGAAAACCTTGTCAACGGACAAGAAGGGTATGTTT  Raphanus sativus cv GSK3-1
FY432220       <-- TGAGCCCATATGTTCTGAAAACCTTGTCAACGGACAAGAAGGGTATGTTT  Raphanus sativus cv GSK3-1
FY432336       <-- TGAGCCCATATGTTCTGAAAACCTTGTCAACGGACAAGAAGGGTATGTTT  Raphanus sativus cv GSK3-1
EY935942       <-- TGAGCCCATATGTTCTGAAAACCTTGTCAACAGACAAGAAGGGTATGTTT  Raphanus sativus cv Early Scarlet Globe
FD943344       <-- TGAGCCCATATGTTCTGAAAACCTTGTCAACAGACAAGAAGGGTATGTTT  Raphanus sativus cv Early Scarlet Globe
EV572149       <-- TGAGCCCATATGTTCTGAAAACCTTGTCAACAGACAAGAAGGGTCTATTT  Raphanus raphanistrum subsp. landra
EY894106       <-- TGAGCCCATATGTTCTGAAAACCTTGTCAACAGACAAGAAGGGTCTATTT  Raphanus raphanistrum subsp. maritimus
EV567159       --> ..................................................  Raphanus raphanistrum subsp. landra
EV570271       --> ..................................................  Raphanus raphanistrum subsp. landra
EY940139       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD947387       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EY913446       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD979151       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY912863       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX747342       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FY444332       --> ..................................................  Raphanus sativus cv GSK3-1
FY432947       --> ..................................................  Raphanus sativus cv GSK3-1
FY448056       --> ..................................................  Raphanus sativus cv GSK3-1
FY438595       --> ..................................................  Raphanus sativus cv GSK3-1
EY897914       --> TGAGCCCATATGTTCTGAAAACCTTGTCAACAGACAAGAAGGGTCTATTT  Raphanus raphanistrum subsp. maritimus

               1201   -   1251
UN21797        --> CATACATCATTCAAGGTTCCTGATGTGTATGGAGTATTCCAGTTTAAGGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY445075       <-- CATACATCATTCAAGGTTCCTGATGTGTATGGAGTATTCCAGTTTAAGGT  Raphanus sativus cv GSK3-1
FY432220       <-- CATACATCATTCAAGGTTCCTGATGTGTATGGAGTATTCCAGTTTAAGGT  Raphanus sativus cv GSK3-1
FY432336       <-- CATACATCATTCAAGGTTCCTGATGTGTATGGAGTATTCCAGTTTAAGGT  Raphanus sativus cv GSK3-1
EY935942       <-- CATACATCATTCAAGGTTCCTGATGTGTATGGAGTATTCCAGTTTAAGGT  Raphanus sativus cv Early Scarlet Globe
FD943344       <-- CATACATCATTCAAGGTTCCTGATGTGTATGGAGTATTCCAGTTTAAGGT  Raphanus sativus cv Early Scarlet Globe
EV572149       <-- CATACATCATTCAAGGTTCCTGATGTGTATGGTGTATTCCAGTTTATGGT  Raphanus raphanistrum subsp. landra
EY894106       <-- CATACATCATTCAAGGTTCCTGATGTGTATGGTGTATTCCAGTTTAAGGT  Raphanus raphanistrum subsp. maritimus
EV567159       --> ..................................................  Raphanus raphanistrum subsp. landra
EV570271       --> ..................................................  Raphanus raphanistrum subsp. landra
EY940139       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD947387       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EY913446       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD979151       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY912863       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX747342       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FY444332       --> ..................................................  Raphanus sativus cv GSK3-1
FY432947       --> ..................................................  Raphanus sativus cv GSK3-1
FY448056       --> ..................................................  Raphanus sativus cv GSK3-1
FY438595       --> ..................................................  Raphanus sativus cv GSK3-1
EY897914       --> CATACATCATTCAAGGTTCCTGATGTGTATGGTGTATTCCAGTTTAAGGT  Raphanus raphanistrum subsp. maritimus

               1251   -   1301
UN21797        --> TGAATATGAAAAGCTAGGCTACACTACATTATCGCTTTCAAAGCAGATTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY445075       <-- TGAATATGAAAAGCTAGGCTACACTACATTATCGCTTTCAAAGCAGATTC  Raphanus sativus cv GSK3-1
FY432220       <-- TGAATATGAAAAGCTAGGCTACACTACATTATCGCTTTCAAAGCAGATTC  Raphanus sativus cv GSK3-1
FY432336       <-- TGAATATGAAAAGCTAGGCTACACTACATTATCGCTTTCAAAGCAGATTC  Raphanus sativus cv GSK3-1
EY935942       <-- TGAATATGAAAAGCTAGGCTACACTACATTATCGCTTTCAAAGCAGATTC  Raphanus sativus cv Early Scarlet Globe
FD943344       <-- TGAATATGAAAAGCTAGGCTACACTACATTATCGCTTTCAAAGCAGATTC  Raphanus sativus cv Early Scarlet Globe
EV572149       <-- TGAATATGAAAAGCTAGGCTACACTACATTATATCTTTCAAAGCAGATTC  Raphanus raphanistrum subsp. landra
EY894106       <-- TGAATATGAAAAGCTAGGCTACACTACATTATATCTTTCAAAGCAGATTC  Raphanus raphanistrum subsp. maritimus
EV567159       --> ..................................................  Raphanus raphanistrum subsp. landra
EV570271       --> ..................................................  Raphanus raphanistrum subsp. landra
EY940139       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD947387       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EY913446       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD979151       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY912863       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX747342       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FY444332       --> ..................................................  Raphanus sativus cv GSK3-1
FY432947       --> ..................................................  Raphanus sativus cv GSK3-1
FY448056       --> ..................................................  Raphanus sativus cv GSK3-1
FY438595       --> ..................................................  Raphanus sativus cv GSK3-1
EY897914       --> TGAATATGAAAAGCTAGGCTACACTACATTATATCTTTCAAAGCAGATTC  Raphanus raphanistrum subsp. maritimus

               1301   -   1351
UN21797        --> CTGTGAGGCCTTACAGACACAATGAGTATGAGAGATTTATCCCAACTGCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY445075       <-- CTGTGAGGCCTTACAGACACAATGAGTATGAGAGATTTATCCCAACTGCG
FY432220       <-- CTGTGAGGCCTTACAGACACAATGAGTATGAGAGATTTATCCCAACTGCG
FY432336       <-- CTGTGAGGCCTTACAGACACAATGAGTATGAGAGATTTATCCCAACTGCG
EY935942       <-- CTGTGAGGCCTTACAGACACAATGAGTATGAGAGATTTATCCCAACTGCG
FD943344       <-- CTGTGAGGCCTTACAGACACAATGAGTATGAGAGATTTATCCCAACCGCG
EV572149       <-- CTGTGAGGCCTTACAGACACAATGAGTATGAGAGATTTATCCCAACTGCG
EY894106       <-- CTGTGAGGCCTTACAGACACAATGAGTATGAGAGATTTATCCCAACTGCG
EV567159       --> ..................................................
EV570271       --> ..................................................
EY940139       --> ..................................................
FD947387       --> ..................................................
EY913446       --> ..................................................
FD979151       --> ..................................................
EY912863       --> ..................................................
EX747342       --> ..................................................
FY444332       --> ..................................................
FY432947       --> ..................................................
FY448056       --> ..................................................
FY438595       --> ..................................................
EY897914       --> CTGTGAGGCCTTACAGACACAATGAGTATGAGAGATTTATCCCAACTGCG

               1351   -   1401
UN21797        --> TATCCTTATTATGGAGCCTGCTTTACCACTATGGCTGGTTTCTTTGTCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY445075       <-- TATCCTTATTATGGAGCCTGCTTTACCACTATGGCTGGTTTCTTTGTCTT
FY432220       <-- TATCCTTATTATGGAGCCTGCTTTACCACTATGGCTGGTTTCTTTGTCTT
FY432336       <-- TATCCTTATTATGGAGCCTGCTTTACCACTATGGCTGGTTTCTTTGTCTT
EY935942       <-- TATCCTTATTATGGAGCCTGCTTTACCACTATGGCTGGTTTCTTTGTCTT
FD943344       <-- TATCCTTATTATGGAGCCTGCTTTACCGCTATGGCTGGTTTCTTTGTCTT
EV572149       <-- TATCCTTATTATGGAGCCTGCTTTACCACTATGGCTGGTTTCTTTGTCTT
EY894106       <-- TATCCTTATTATGGAGCCTGCTTTACCACTATGGCTGGTTTCTTTGTCTT
EV567159       --> ..................................................
EV570271       --> ..................................................
EY940139       --> ..................................................
FD947387       --> ..................................................
EY913446       --> ..................................................
FD979151       --> ..................................................
EY912863       --> ..................................................
EX747342       --> ..................................................
FY444332       --> ..................................................
FY432947       --> ..................................................
FY448056       --> ..................................................
FY438595       --> ..................................................
EY897914       --> TATCCTTATTATGGAGCCTGCTTTACCACTATGGCTGGTTTCTTTGTCTT

               1401   -   1451
UN21797        --> CAGCTTCGTCTACCTCTACCATAAGTAGAAAATCCCTTGAACGGTTCTCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY445075       <-- CAGCTTCGTCTACCTCTACCATAAGTAGAAAATCCCTTGAACGGTTCTCC
FY432220       <-- CAGCTTCGTCTACCTCTACCATAAGTAGAAAATCCCTTGAACGGTTCTCC
FY432336       <-- CAGCTTCGTCTACCTCTACCATAAGTAGAAAATCCCTTGAACGGTTCTCC
EY935942       <-- CAGCTTCGTCTACCTCTATCATAAGTAGAAAATCCCTTGAACGGTTCTCC
FD943344       <-- CAGCTTCGTCTACCTCTACCATAAGTAGAAAATCCCTTGAACGGTTCTCC
EV572149       <-- CAGCTTCGTCTACCTCTACCATAAGTAGAAAATCCCTTGAACGGTTCTCC
EY894106       <-- CAGCTTCGTCTACCTCTACCATAAGTAGAAAATCCCTTGAACGGTTCTCC
EV567159       --> ..................................................
EV570271       --> ..................................................
EY940139       --> ..................................................
FD947387       --> ..................................................
EY913446       --> ..................................................
FD979151       --> ..................................................
EY912863       --> ..................................................
EX747342       --> ..................................................
FY444332       --> ..................................................
FY432947       --> ..................................................
FY448056       --> ..................................................
FY438595       --> ..................................................
EY897914       --> CAGCTTCGTCTACCTCTACCATAAGTAGAAAATCCCTTGAACGGTTCTCC

               1451   -   1501
UN21797        --> AGTCGAATAGAGAAAAATAAAGCCTTACTTTCATATTTAGACGAGAGAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY445075       <-- AGTCGAATAGAGAAAAATAAAGCCTTACTTTCATATTTAGACGAGAGAAC
FY432220       <-- AGTCGAATAGAGAAAAATAAAGCCTTACTTTCATATTTAGACGAGAGAAC
FY432336       <-- AGTCGAATAGAGAAAAATAAAGCCTTACTTTCATATTTAGACGAGAGAAC
EY935942       <-- AGTCGAATAGAGAAAAATAAAGCCTTACTTTCATATTTAGACGAGAGAAC
FD943344       <-- AGTCGAATAGAGAAAAATAAAGCCTTACTTTCATATTTAGACGAGAGAAC
EV572149       <-- AGTCGAATAGAGAAAAATAAAGCCTTACTTTCATATTTAGACGAGAGAAC
EY894106       <-- AGTCGAATAGAGAAAAATAAAGCCTTACTTTCATATTTAGACGAGAGAAC
EV567159       --> ..................................................
EV570271       --> ..................................................
EY940139       --> ..................................................
FD947387       --> ..................................................
EY913446       --> ..................................................
FD979151       --> ..................................................
EY912863       --> ..................................................
EX747342       --> ..................................................
FY444332       --> ..................................................
FY432947       --> ..................................................
FY448056       --> ..................................................
FY438595       --> ..................................................
EY897914       --> AGTCGAATAGAGAAAAATAAAGCCTTACTTTCATATTTAGACGAGAGAAC

               1501   -   1551
UN21797        --> AAAACATTTGAATCTTGTTTTGTCTTTTTGCCAACAAGCATTAGTGAACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY445075       <-- AAAACATTTGAATCTTGTTTTGTCTTTTTGCCAACAAGCATTAGTGAACA
FY432220       <-- AAAACATTTGAATCTTGTTTTGTCTTTTTGCCAACAAGCATTAGTGAACA
FY432336       <-- AAAACATTTGAATCTTGTTTTGTCTTTTTGCCAACAAGCATTAGTGAACA
EY935942       <-- AAAACATTTGAATCTTGTTTTGTCTTTTTGCCAACAAGCATTAGTGAACA
FD943344       <-- AAAACATTTGAATCTTGTTTTGTCTTTTTGCCAACAAGCATTAGTGAACA
EV572149       <-- AAAACATTTGAATCTTGCTTTGTCTTTTTGCCAACAAGCATTAGTGAACA
EY894106       <-- AAAACATTTGAATCTTGTTTTGTCTTTTTGCCAACAAGCATTAGTGAACA
EV567159       --> ..................................................
EV570271       --> ..................................................
EY940139       --> ..................................................
FD947387       --> ..................................................
EY913446       --> ..................................................
FD979151       --> ..................................................
EY912863       --> ..................................................
EX747342       --> ..................................................
FY444332       --> ..................................................
FY432947       --> ..................................................
FY448056       --> ..................................................
FY438595       --> ..................................................
EY897914       --> AAAACATTTGAATCTTGTTTTGTCTTTTTGCCAACAAGCATTAGTGAACA

               1551   -   1601
UN21797        --> CTTGCAACCTTTTTTGTTGACAAGATATTTTTAAGTGAACCTAACTTTAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY445075       <-- CTTGCAACCTTTTTTGTTGACAAGATTTTT....................
FY432220       <-- CTTGCAACCTTTTTTGTTGACAAGATATTTTTAAGTGAACCTAAC.....
FY432336       <-- CTTGCAACCTTTTTTGTTGACAAGATATTTTTAAGTGAACCTAACTT...
EY935942       <-- CTTGCAACCTTTTTTGTTGACAAGATATTTTTAAGTGAACCTAACTTTAC
FD943344       <-- CTTGCAACCTTTTTTGTTGACAAGATATTTTTAAGTTAACCc........
EV572149       <-- CTTGCAACCTTTTTTGTTGACAAGATATTTTTAAGTGAACCTAACTTTAC
EY894106       <-- CTTGCAACCTTTTTTGTTGACAAGATATTTTTAAGTGAACCTAACTTTAC
EV567159       --> ..................................................
EV570271       --> ..................................................
EY940139       --> ..................................................
FD947387       --> ..................................................
EY913446       --> ..................................................
FD979151       --> ..................................................
EY912863       --> ..................................................
EX747342       --> ..................................................
FY444332       --> ..................................................
FY432947       --> ..................................................
FY448056       --> ..................................................
FY438595       --> ..................................................
EY897914       --> CTTGCAACCTTTTTTGTTGACAAGATATTTTTAAGTGAACCTAACTTTAC

               1601   -   1651
UN21797        --> ACCCC
                   ~~~~~
FY445075       <-- .....
FY432220       <-- .....
FY432336       <-- .....
EY935942       <-- ACCC.
FD943344       <-- .....
EV572149       <-- ACCC.
EY894106       <-- ACCCC
EV567159       --> .....
EV570271       --> .....
EY940139       --> .....
FD947387       --> .....
EY913446       --> .....
FD979151       --> .....
EY912863       --> .....
EX747342       --> .....
FY444332       --> .....
FY432947       --> .....
FY448056       --> .....
FY438595       --> .....
EY897914       --> ACCCC