Library    |     Search    |     Batch query    |     SNP    |     SSR  

Alignment for radish unigene UN21798

               1      -     51
UN21798        --> GGGGAGAAAACGTCCTTTTGAGTTTGATTGGAAACAGCAAAGAATTATAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY943972       <-- ..................................................
EV544573       <-- ..................................................
EX899184       <-- ..................................................
EX766902       <-- ..................................................
FD936157       <-- ..................................................
EV549005       --> GGGGAGAAAACGTCCTTTTGAGTTTGATTGTAAACAGCAAAGAATTA-A-
EX756325       --> .cGGAGAAAACGTCCTTTTGAGTTCGATTGGAAACAGCAAAGAATTATAC
FD576746       --> .................ggGAGTTTGATTGGAAACAGCAAAGAATTATAC
EX894939       --> ............................gGGAAACAGCAAAGAATTATAC
EY948231       --> ............................gGGAAACAGCAAAGAATTATAC
EV548208       --> ..................................................
FD940224       --> ..................................................
EX762690       --> ..................................................

               51     -    101
UN21798        --> AACACAGCGAAAAATCAAGAATTGAGATTCCCTAA---GAATCGACGGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY943972       <-- ..................................................
EV544573       <-- ..................................................
EX899184       <-- ..................................................
EX766902       <-- ..................................................
FD936157       <-- ..................................................
EV549005       --> AACACAGCGAAAAATCAAGAATTGA--TTCCCTAATAAGAATCGACGGGA
EX756325       --> AACACAGAGAAAAATCAAGAATTGAGATTCCCTAA---GAATCGACGGGA
FD576746       --> AACACAGCGAAAAATCAAGAATTGAGATTCCCTAA---GAATCGACGGGA
EX894939       --> AACACAGCGAAAAATCAAGAATTGAGATTCCCTAA---GGAACGACGGGA
EY948231       --> AACACAGCGAAAAATCAAGAATTGAGATTCCCTAA---GAATCGACGGGA
EV548208       --> ..................................................
FD940224       --> ..................................................
EX762690       --> ..................................................

               101    -    151
UN21798        --> AGAGGAGCAATCGAATTTCCCGGAGGATGCTGCTAGGAGCCCCAAAGATT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY943972       <-- ..................................................
EV544573       <-- ..................................................
EX899184       <-- ..................................................
EX766902       <-- ..................................................
FD936157       <-- ..................................................
EV549005       --> AGAGGAGCAATCGAATTTCCCGGAGGATGCTGCTAGGAGCCCCAAAGATT
EX756325       --> AGAGGAGCAATCGAATTTCCCGGAGGATGCTGCTAGGAGCCCCAAAGATT
FD576746       --> AGAGGAGCAATCGAATTTCCCGGAGGATGCTGCTAGGAGCCCCAAAGATT
EX894939       --> AGAGGAGCAATCGAATTTCCCGGAGGATGCTGCTAGGAGCCCCAAAGATT
EY948231       --> AGAGGAGCAATCGAATTTCCCGGAGGATGCTGCTAGGAGCCCCAAAGATT
EV548208       --> ...........................................AAAGATT
FD940224       --> ..................................................
EX762690       --> ..................................................

               151    -    201
UN21798        --> CTGT-AAATTGTAAAAAAA-TGGGGGGAGAAGATTCTGAACGCGATAAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY943972       <-- ..................................................
EV544573       <-- ..................................................
EX899184       <-- ..................................................
EX766902       <-- ..................................................
FD936157       <-- ..................................................
EV549005       --> CTGT-AAATTGTAAAAAAA-TGGGGGGAGAAGATTCTGAACGCGATAAAG
EX756325       --> CTGT-AAATTGTAAAAAAA-TGGGGGGAGAAGAATCTGAACGCGATAAAG
FD576746       --> CTGT-AAATTGTAAAAAAAATGGGGGGAGAAGATTCTGAACGCGATAAAG
EX894939       --> CTGTTAAATTG--AAAAAA-TGGGGGGAGAAGATTCTGAACGCGATAAAG
EY948231       --> CTGT-AAATTGTAAAAAAA-TGGGGGGAGAAGATTCTGAACGCGATAAAG
EV548208       --> CTGT-AAATTGTAAAAAA--TGGGGGCAGAAGATTCTGAACGCGATAAAG
FD940224       --> ............................GAAGATTCTGAACGCGATAAAG
EX762690       --> ..................................................

               201    -    251
UN21798        --> ATGGAAAGTGGAAACCTCCGCCGCCTCAGAAGGCCGACTTAAAGCTTTGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY943972       <-- ..................................................
EV544573       <-- ..................................................
EX899184       <-- ..................................................
EX766902       <-- ..................................................
FD936157       <-- ..................................................
EV549005       --> ATGGAAAGTGGAAACCCCCGCCGCCTCAGAAGGCCGACTTGAAGCTTTGG
EX756325       --> ATGGAAAGTGGAAACCTCCGCCGCCTCAGAAGGCCGACTTAAAGCTTTGG
FD576746       --> ATGGAAAGTGGAAACCTCCGCCGCCTCAGAAGGCCGACTTAAAGCTTTGG
EX894939       --> ATGGAAAGTGGAAACCTCCGCCGCCTCAGAAGGCCGACTTAAAGCTTTGG
EY948231       --> ATGGAAAGTGGAAACCTCCGCCGCCGCAGAAGGCCGACTTAAAGCTTTGG
EV548208       --> ATGGAAAGTGGAAACCTCCGCCGCCTCAGAAGGCCGACTTAAAGCTTTGG
FD940224       --> ATGGAAAGTGGAAACCTCCGCCGCCTCAGAAGGCCGACTTAAAGCTTTGG
EX762690       --> ..GGAAAGTGGAAACCTCCGCCGCCTCAGAAGGCCGACTTAAAGCTTTGG

               251    -    301
UN21798        --> GGAATCCTCGCCTTTACTGTAATCGGCGCAACCGCCACCACTTTCGCCGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY943972       <-- .............................AACCGCCACCACTTTCGCCGT
EV544573       <-- ........................................CTTTCGCCGT
EX899184       <-- ..................................................
EX766902       <-- ..................................................
FD936157       <-- ..................................................
EV549005       --> GGAATCCTCGCCTTTACTGTAATCGGCGCAACCGCCACCACTTTCGCCGT
EX756325       --> GGAATCCTCGCCTTTACTGTAATCGGCGCAACCGCCACCACTTTCGCCGT
FD576746       --> GGAATCCTCGCCTTTACTGTAATCGGCGCAACCGCCACCACTTTCGCCGT
EX894939       --> GGAATCCTCGCCTTTACTGTAATCGGCGCAACCGCCACCACTTTCGCCGT
EY948231       --> GGAATCCTCGCCTTTACTGTAATCGGCGCAACCGCCACCACTTTCGCCGT
EV548208       --> GGAATCCTCGCCTTTACTGTAATCGGCGCAACCGCCTCCACTTTCGCCGT
FD940224       --> GGAATCCTCGCCTTTACTGTAATCGGCGCAACCGCCACCACTTTCGCCGT
EX762690       --> GGAATCCTCGCCTTTACTGTAATCGGCGCAACCGCCACCACTTTCGCCGT

               301    -    351
UN21798        --> TCATCAGTTGCGAAGAACTTTTGATTGGGTCTATACTCAGGTAGGTAGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY943972       <-- TCATCAGT-GCGAAGAACTTT-GATTGGGTCTATACTCAGGTAGGTAGAG
EV544573       <-- TCATCAGTTGCGAAGAACTTTTGATTGGGTCTATACTCAGGTAGGTAGAG
EX899184       <-- ...............................................GAG
EX766902       <-- ..................................................
FD936157       <-- ..................................................
EV549005       --> TCATCAGTTGCGAAGAACTTTTGATTGGGTCTATACTCAGGTAGGTAGAG
EX756325       --> TCATCAGTTGCGAAGAACTTTTGATTGGGTCTATACTCAGGTAG----AG
FD576746       --> TCATCAGTTGCGAAGAACTTTTGATTGGGTCTATACTCAGGTAGGTAGAG
EX894939       --> TCATCAGTTGCGAAGAACTTTTGATTGGGTCTATACTCAGGTAGGTAGAG
EY948231       --> TCATCAGTTGCGAAGAACTTTTGATTGGGTCTATACTCAGGTAGGTAGAG
EV548208       --> TCATCAGTTGCGAAGAACTTTTGATTGGGTCTATACTCAGGTAGGTAGAG
FD940224       --> TCATCAGTTGCGAAGAACTTTTGATTGGGTCTATACTCAGGTAGGTAGAG
EX762690       --> TCATCAGTTGCGAAGAACTTTTGATTGGGTCTATACTCAGGTAGGTAGAG

               351    -    401
UN21798        --> CACAGTCAGCAGCGCGGAGAGGAACCAGAGGCGGTTCTTTCAGAACAGCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY943972       <-- CACAGTCAGCAGCGGGGAGAGGAACCAGAGGCGGTTCTTTCAGAACAGCT
EV544573       <-- CACAGTCAGCAGCGCGGAGAGGAACCAAAGGCAGTTCTTTCAGAACAGCT
EX899184       <-- CACAGTCAGCAGCGGGGAGAGGAACCAGAGGCGGTTCTTTCAGAACAGCT
EX766902       <-- ..................................TTCTTTCAGAACAGCT
FD936157       <-- ..................................................
EV549005       --> CACAGTCAGCAGCGCGGAGAGGAACCAAAGGCAGTTCTTTCAGAACAGCT
EX756325       --> CACAGTCAGCAGCGCGGAGAGGAACCAGAGGCGGTTCTT...........
FD576746       --> CACAGTCAGCAGCGCGGAGAGGAACCAGAGGGGGTTCTTTCAGAACAGCT
EX894939       --> CACAGTCAGCAGCGGGGAGAGGAACCAGAGGCGGTTCTTTCAGAACAGCT
EY948231       --> CACAGTCAGCAGCGGGGAGAGGAACCAGAGGCGGTTCTTTCAGAACAGCT
EV548208       --> CACAGTCAGCAGCGCGGAGAGGAACGAGAGGCGGTTTTTTCAGAACAGCT
FD940224       --> CACAGTCAGCAGCGCGTAGAGGAACCAGAGGGGGTTCTTTCAGGACCGCT
EX762690       --> CACAGTCAGCAGCGGGGAGAGGAACCAGAGGCGGTTCTTTCATAACAGCT

               401    -    451
UN21798        --> TATCAGGAGGAAGCATGGAGAAGGTACAATAAACGGATGCAAGAGGAGTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY943972       <-- TATCAGGAGGAAGCATGGAGAAGGCACAATAAACGGATGCAAGAGGAGTA
EV544573       <-- TATCAGGAGGAAGCATGGAGAAGGTACAATAAACGGATGCAAGAGGAGTA
EX899184       <-- TATCAGGAGGAAGCATGGAGAAGGTACAATAAACGGATGCAAGAGGAGTA
EX766902       <-- TATCAGGAGGAAGCATGGAGAAGGTACAATAAACGGATGCAAGAGGAGTA
FD936157       <-- ............................ATAAACGGATGCAAGAGGAGTA
EV549005       --> TATCAGGAGGAAGCATGGAGAAGGTACAATAAACGGATGCAAGAGGAGTA
EX756325       --> ..................................................
FD576746       --> TATCAAGAGGAAGCATGGAGAAGGTACAATAAACGGATGCAAGAGGAGTA
EX894939       --> TATCAGGAGGAAGCATGGAGAAGGTACAATAAACGGATGCAAGAGGAGTA
EY948231       --> TATCAGGAGGAAGCATGGAGAAGGCACAATAAACGGATGCAAGAGGAGTA
EV548208       --> TATCAGGAGGAAGCATGGAGAAGGTACAATAAACGGATGCAAGAGGAGTA
FD940224       --> TATCAGGAGGAAGCATGGAGAAGGTACGATAAACGGATGCAAGAGGAGTA
EX762690       --> TATCAGGAGGA.......................................

               451    -    501
UN21798        --> TGAGGAAGAGCTTGAGAGAGTGGAACGTATTAGGCGTATGCAAAGCGTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY943972       <-- TGAGGAAGAGCTTGAGAGAGTGGAACGTATTAGGCGTATGCAAAGCGTTT
EV544573       <-- TGAGGAAGAGCTTGAGAGAGTGGAACGTATTAGGCGTATGCAAAGCGTTT
EX899184       <-- TGAGGAAGAGCTTGAGAGAGTGGAACGTATTAGGCGTATGCA-TGCGTTT
EX766902       <-- TGAGGAAGAGCTTGAGAGAGTGGAACGCATTAGGCGTATGCAAAGCGTTT
FD936157       <-- TGAGGAAGAGCTTGAGAGAGTGGAACGTATTAGGCGTATGCAAAGCGTTT
EV549005       --> TGAGGAAGAGCTTGAGAGAGTGGAACGTATTAGGCGTATGCAAAGCGTTT
EX756325       --> ..................................................
FD576746       --> TGAGGAAGAGCTTGAGAGAGTGGAACGTATTAGGCGTATGCAAAGCGTTT
EX894939       --> TGAGGAAGAGCTTGAGAGAGTGGAACGTATTAGGCGTATGCA-TGCGTTT
EY948231       --> TGAGGAAGAGCTTGAGAGAGTGGAACGTATTAGGCGTATGCAAAGCGTTT
EV548208       --> TGAGGAAGAGCTTGAGAGAGTGGAACGTATTAGGCGTATGCAAAGCGTTT
FD940224       --> TGAGGAAGAGCTTGAGAGAGTGGAACGTATTAGGCGTATGCAAAGCGTTT
EX762690       --> ..................................................

               501    -    551
UN21798        --> TCAACAGGGAGAGGAACAAATTTAGAGGGGGATTCGAGAACTGGAAGGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY943972       <-- TCAACAGGGAGAGGAACAAATTTAGAGGGGGATTCGAGAACTGGAAGGAA
EV544573       <-- TCAACAGGGAGAGGAACAAATTTAGAGGGGGCTTCGAGAACTGGAAGAAA
EX899184       <-- TCAACAGGGAGAGGAACAAATTTAGAGGGGGATTCGAGAACTGGAAGGAA
EX766902       <-- TCAACAGGGAGAGGAACAAATTTAGAGGGGGATTCGAGAACTGGAAGGAA
FD936157       <-- TCAACAGGGAGAGGAACAAATTTAGAGGGGGATTCGAGAACTGGAAGGAA
EV549005       --> TCAACAGGGAGAGGAACAAATTTAGAGGGGGCTTCGAGAACTGGAAGAAA
EX756325       --> ..................................................
FD576746       --> TCAACAGGGAGAGGAACAAATTTAGAGGGGGCTTCGAGAACTGGAAGGAA
EX894939       --> TCAACAGGGAGAGGAACAAATTTAGAGGGGGATTCGAGAACTGGAAGGAA
EY948231       --> TCAACAGGGAGAGGAACAAATTTAGAGGGGGATTCGAGAACTGGAAGGAA
EV548208       --> TCAACAGGGAGAGGAACAAATTTAGAGGGGGCTTCGAGAACTGGAAGGAA
FD940224       --> TCAACAGGGAGAGGAACAAATTTAGAGGGGGATTCGAGAACTGGAAGGAA
EX762690       --> ..................................................

               551    -    601
UN21798        --> AATGATCCTAATGCTCACCAATACCATCAGCAGTATCAGCGAAATGATTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY943972       <-- AATGATCCTAACGCTCACCAATACCATCAGCAGTATCAGCGAAATGATTG  Raphanus sativus cv Rat-Tail Radish #3870
EV544573       <-- AATGATCCTAATGCTCACCAGTACCATCAGCAGTATCAGCGAAATGATTG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX899184       <-- AATGATCCTAACGCTCACCAATACCATCAGCAGTATCAGCGAAATGATTG  Raphanus sativus cv Early Scarlet Globe
EX766902       <-- AATGATCCTAATGCTCACCAATACCATCAGCAGTATCAGGGAAATGATTG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD936157       <-- AATGATCCTAATGCTCACCAATACCATCAGCAGTATCAGCGAAATGATTG  Raphanus sativus var. oleiformis
EV549005       --> AATGATCCTAATGCTCACCAGTACCATCAGCAGTATCAGCGAAATGATTG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX756325       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD576746       --> AATGATCCTAATGCTCACCAATACCATCAGCAGTATCAGCGAAATGATTG  Raphanus sativus cv Rat-Tail Radish #3870
EX894939       --> AATGATCCTAACGCTCACCAATACCATCAGCAGTATCAGCGAAATGATTG  Raphanus sativus cv Early Scarlet Globe
EY948231       --> AATGATCCTAACGCTCACCAATACCATCAGCAGTATCAGCGAAATGATTG  Raphanus sativus cv Rat-Tail Radish #3870
EV548208       --> AATGATCCTAATGCTCACCAGTACCATCAGCAGTATCAGCGAAATGATTG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD940224       --> AATGATCCTAATGCTCACCAATACCATCAGCAGTATCAGCGAAATGATTG  Raphanus sativus var. oleiformis
EX762690       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)

               601    -    651
UN21798        --> GTACTGGAAAGCTGAGTCTACCTTTAGAAACCAAAGGACCAACAATCACC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY943972       <-- GTACTGGAAAGCTGAGTCTACCTTTAGAAACCAAAGGACCAACAATCACC  Raphanus sativus cv Rat-Tail Radish #3870
EV544573       <-- GTACTGGAAAGCTGAGTCTACCTTTAGAAACCAAAGGACCAACAATCAGC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX899184       <-- GTACTGGAAAGCTGAGTCTACCTTTAGAAACCAAAGGACCAACAATCACC  Raphanus sativus cv Early Scarlet Globe
EX766902       <-- GTACTGGAAAGGTGAGTCTACCTTTAGAAACCAAAGGACCAGCAATCACC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD936157       <-- GTACTGGAAAGCTGAGTCTACCTTTAGAAACCAAAGGACCAATCATCAGG  Raphanus sativus var. oleiformis
EV549005       --> GTACTGGAAAGCTGAGTCTACCTTTAGAAACCAAAGGACCAACAATCAGC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX756325       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD576746       --> GTACTGGAAAGCTGAGTCTACCTTTAGAAACCTAAGGACCAACAATCACC  Raphanus sativus cv Rat-Tail Radish #3870
EX894939       --> GTACTGGAAAGCTGAGTCTACCTTTAGAAACCAAAGGACCAACAATCACC  Raphanus sativus cv Early Scarlet Globe
EY948231       --> GTACTGGAAAGCTGAGTCTACCTTTAGAAACCAAAGGACCAACAATCACC  Raphanus sativus cv Rat-Tail Radish #3870
EV548208       --> GTACTGGAAAACTGAGTCTACCTTTAGAAACCAAAGGACCAACAATCACC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD940224       --> GTACTGGAAAGCTGAGTCTACCTTTAGAAACCAAAGGACCAATCATCAGG  Raphanus sativus var. oleiformis
EX762690       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)

               651    -    701
UN21798        --> AGGAGCCTCCAAAACAGACTAGAGTCTATCCACTATCGCATCACTACTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY943972       <-- AGGAGCCTCCAAAACAGTCTAGAGTCTATCCACTATCGCATCACTACTCT
EV544573       <-- AGGAGCCTCCTAAACAGACTAGAGTCTATCCACTATCGCATCACTACTCT
EX899184       <-- AGGAGCCTCCAAAACAGACTAGAGTCTATCCACTATCGCATCACTACTCT
EX766902       <-- AGGAGCCTCCAAAACAGACTAGAGTCTATCCACTATCGCATCACTACTCT
FD936157       <-- AGCCTCCTCCAAAACAGACTAGAGTCTATCCACTGTCGCATCACTACTCT
EV549005       --> AGGAGCCTCCTAAACAGACTAGAGTCTATCCACTATCGCATCACTACTCT
EX756325       --> ..................................................
FD576746       --> AGGAGCCTCCAAAACAGTCTAGAGTCTATCCACTATCGCATCACTACTCT
EX894939       --> AGGAGCCTCCAAAACAGACTAGAGTCTATCCACTATCGCATCACTACTCT
EY948231       --> AGGAGCCTCCAAAACAGTCTAGAGTCTATCCACTATCGCATCACTACTCT
EV548208       --> AGGAGCCTCCTAAACAGACTAGAGTCTATCCACTATCGCATCACTACTCT
FD940224       --> AGCCTCCTCCAAAACAGACTAGAGTCTATCCACTGTCGCATCACTACTCT
EX762690       --> ..................................................

               701    -    751
UN21798        --> GTTTTAGGGCTCAGCAGGTCCAGGGCAACTCCATACACAGAAGCTGAGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY943972       <-- GTTTTAGGGCTCAGCAGGTCCAGGGCAACTCCATACACAGAAGCTGAGAT
EV544573       <-- GTTTTAGGGCTCAGCAGGTCCAGGGCAATTCCCTACACAGAAGCTGAGAT
EX899184       <-- GTTTTAGGGCTCAGCAGGTCCAGGGCAACTCCATACACAGAAGCTGAGAT
EX766902       <-- GTTTTAGGGCTCAGCAGGTCCAGGGCAACTCCATACACAGAAGCTGAGAT
FD936157       <-- GTTTTAGGGCTCAGCAGGTCCAGGGCAACTCCATACACAGAAGGTGAGAT
EV549005       --> GTTTTAGGGCTCA.....................................
EX756325       --> ..................................................
FD576746       --> GTT...............................................
EX894939       --> GTTTTAGGGCTCAGCAG-TCCAGGGCAACTCCATACACAGAAGCTGAGAT
EY948231       --> GTTTTAGGGCTCAGCAG-TCCAGGGCAACTCCATACACAGAAGC......
EV548208       --> GTTTTAGGGCTCA.....................................
FD940224       --> G.................................................
EX762690       --> ..................................................

               751    -    801
UN21798        --> TAAGAAAGCGTTCAGGGAGAAGGCGATGGAATTCCATCCAGACCAAAATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY943972       <-- TAAGAAAGCGTTCAGGGAGAAGGCGATGGAATTCCATCCAGACCAAAATC
EV544573       <-- TAAGAAAGCGTTCAGGGAGAAGGCGATGGAATTCCATCCAGACCAAAATC
EX899184       <-- TAAGAAAGCGTTCAGGGAGAAGGCGATGGAATTCCATCCAGACCAAAATC
EX766902       <-- TAAGAAAGCGTTCAGGGAGAAGGCGATGGAATTCCATCCAGACCAAAATC
FD936157       <-- TAAGAAAGCCTTCAGGGAGAAGGCGATGGAATTCCATCCAGACCAAAATC
EV549005       --> ..................................................
EX756325       --> ..................................................
FD576746       --> ..................................................
EX894939       --> TAAGAAAGCGTTCAGG-AGAAG-CGATGGAATTCCATCCAGACCAAAt..
EY948231       --> ..................................................
EV548208       --> ..................................................
FD940224       --> ..................................................
EX762690       --> ..................................................

               801    -    851
UN21798        --> AAGATAACAAAGATGTAGCTGAAGCAAAATTCAAAGAGGTGTTACTTTCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY943972       <-- AAGATAACAAAGATGTAGCTGAAGCAAAATTCAAAGAGGTGTTACTTTCG
EV544573       <-- AAGATAACAAAGATGTAGCTGAAGCAAAATTCAAAGAGGTGTTACTTTCG
EX899184       <-- AAGATAACAAAGATGTAGCTGAAGCAAAATTCAAAGAGGTGTTACTTTCG
EX766902       <-- AAGATAACAAAGATGTAGCTGAAGCAAAATTCAAAGAGGTGTTACTTTCG
FD936157       <-- AAGATAACAAAGATGTAGCTGAAGCAAAATTCAAAGAGGTGTTACTTTCG
EV549005       --> ..................................................
EX756325       --> ..................................................
FD576746       --> ..................................................
EX894939       --> ..................................................
EY948231       --> ..................................................
EV548208       --> ..................................................
FD940224       --> ..................................................
EX762690       --> ..................................................

               851    -    901
UN21798        --> TATGAAGCTATAAAAGAGGAAAGAAAAGACAAGTAGGTTTTTTTTTTGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY943972       <-- TATGAAGCTATAAAAGAGGAAAGAAAAGACAAGTAGGTTTTTGTTTTGTT
EV544573       <-- TATGAAGCTATAAAAGAGGAAAGAAAAGACAAGTAGGTTTTTT--TGGTT
EX899184       <-- TATGAAGCTATAAAAGAGGAAAGAAAAGACCAGTAGGTTTTTTTTT-GTT
EX766902       <-- TATGAAGCTATAAAAGAGGAAAGAAAAGACAAGTAGGTTTTTTTTTTGTT
FD936157       <-- TATGAAGCTATAAAAGAGGAAAGAAAAGACAAGTAGGTTTTTGTTTTGTT
EV549005       --> ..................................................
EX756325       --> ..................................................
FD576746       --> ..................................................
EX894939       --> ..................................................
EY948231       --> ..................................................
EV548208       --> ..................................................
FD940224       --> ..................................................
EX762690       --> ..................................................

               901    -    951
UN21798        --> AAAGAGATCAAATCTTTTTCCCCATACAGGCGACGAATGTCGATATATGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY943972       <-- AAAGAGATCAAATCTTTTTCCCCATACAGGCGACGAATGTCGATATATGA
EV544573       <-- AAAGAGATCAAATCTTTTTCCCCATACAGGCGACGAATGTCGATATATGA
EX899184       <-- AAAGAGATCAAATCTTTTTCCCCATACAGGCGACGAATGTCGATATATGA
EX766902       <-- AAAGAGATCAAATCTTTTTCCCCATACAGGCGACGAATGTCGATATATGA
FD936157       <-- AAAGAGATCAAATCTTTTTCCCCATACAGGCGACGAATGTCGATATATGA
EV549005       --> ..................................................
EX756325       --> ..................................................
FD576746       --> ..................................................
EX894939       --> ..................................................
EY948231       --> ..................................................
EV548208       --> ..................................................
FD940224       --> ..................................................
EX762690       --> ..................................................

               951    -   1001
UN21798        --> AACAGCTTTCTTCGGGTGTGTTCGCATTATAGGTTCATTT--ATATAATA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY943972       <-- AACAGCTTTCTTCGGGTGTGTTCGCATTATAGGTTCATTT--ATATAATA
EV544573       <-- AACAGCTTTCTTCGGGTGTGTTCGCTTTATAGGTTCATTTTTATATAATA
EX899184       <-- AACAGCTTTCTTCGGGTGTGTTCGCATTATAGGTTCATTT--ATATAATA
EX766902       <-- AACAGCTTTCTTCGGGTGTGTTCGCATTATAGGTTCATTT--ATATAATA
FD936157       <-- AACAGCTTTCTTCGGGTGTGTTCGCATTATAGGTTCATTT--ATATAATA
EV549005       --> ..................................................
EX756325       --> ..................................................
FD576746       --> ..................................................
EX894939       --> ..................................................
EY948231       --> ..................................................
EV548208       --> ..................................................
FD940224       --> ..................................................
EX762690       --> ..................................................

               1001   -   1051
UN21798        --> ATTTTATGGTTTGTGTTCGACGCAGTTGTGGTTCTTTGTTGTAATATAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY943972       <-- ATTTTATGGTTTGTGTTCGACGCAGTTGTGGTTCTTTGTTGTAATATAAC
EV544573       <-- ATTTTATGGTTTGTGTTCGACGCAGTTGTGGTTCTTTGTTGTAATATAAC
EX899184       <-- ATTTTATGGTTTGTGTTCGACGTAGTTGTGGTTCTTTGTTGTAATATAAC
EX766902       <-- ATTTTATGGTTTGTGTTCGAC.............................
FD936157       <-- ATTTTATGGTTTGTGTTCGACGCAGTTGTGGTTCTTTGTTGTAATATAAC
EV549005       --> ..................................................
EX756325       --> ..................................................
FD576746       --> ..................................................
EX894939       --> ..................................................
EY948231       --> ..................................................
EV548208       --> ..................................................
FD940224       --> ..................................................
EX762690       --> ..................................................

               1051   -   1101
UN21798        --> GAAACCAAGTCCAGATTAATTAAGATGGAAATAAGGAAAACATAAGAAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY943972       <-- GAAACCAAGTCCAGATTAATTAAGATGGAAATAGGGAAAACATAAGAAAA
EV544573       <-- GAAACCAAGTCCAGATTAATTAAGATGGAAATAAGGAAAACATAAGAACA
EX899184       <-- GAAACCAAGTCCAGATTAATTAAGATGGAAATAAGGAA............
EX766902       <-- ..................................................
FD936157       <-- GAAACCAAGTCCAGATTAATTAAGATGGAAATAAGGAAAACATAAGAAAA
EV549005       --> ..................................................
EX756325       --> ..................................................
FD576746       --> ..................................................
EX894939       --> ..................................................
EY948231       --> ..................................................
EV548208       --> ..................................................
FD940224       --> ..................................................
EX762690       --> ..................................................

               1101   -   1151
UN21798        --> GAGAATTTTTTTTTTTGGTCAG
                   ~~~~~~~~~~~~~~~~~~~~~~
EY943972       <-- GAGAATTTTTTTTTTTGGTCAG
EV544573       <-- GAGAATTTctac..........
EX899184       <-- ......................
EX766902       <-- ......................
FD936157       <-- GAGAATTTTTTTTTTgggc...
EV549005       --> ......................
EX756325       --> ......................
FD576746       --> ......................
EX894939       --> ......................
EY948231       --> ......................
EV548208       --> ......................
FD940224       --> ......................
EX762690       --> ......................