Library    |     Search    |     Batch query    |     SNP    |     SSR  

Alignment for radish unigene UN21802

               0      -     50
UN21802        --> .CCCACCAAGCAAAGATATTATTGTATGCCGCCTTATGTTATAACTTACT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY940549       <-- .CCCACCAAGCAAAGATATTATTGTATGCCGCCTTATGTTATAACTTACT
EX904454       <-- ..................................................
FD543200       <-- ..................................................
EV539021       <-- ..................................................
EV537639       <-- ..................................................
EW730457       --> .CCCACCAAGCAAAGATATTATTGTATGCCGCCTTATGTTATAACTTACT
FD539083       --> .CCCACCAAGCAAAGATATTATTGTATGCCGCCTTATGTTATAACTTACT
EV541835       --> .gCCACCAAGCAAAGATATTATTGTATGCCGCCTTATGTTATAACTTACT
EX908363       --> agCCACCAAGCAAAGATATTATTGTATGCCGCCTTATGTTATAACTTACT
EV542909       --> .......................GTATGCCGCCTTATGTTATAACTTACT

               50     -    100
UN21802        --> CAAATTGTAACAATTCAATAACAAAACCGCCACAAACCCAAACCCAAAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY940549       <-- CAAATTGTAACAATTCAATAACAAAACCGCCACAAACCCAAACCCAAAAC
EX904454       <-- ..................................................
FD543200       <-- ..................................................
EV539021       <-- ..................................................
EV537639       <-- ..................................................
EW730457       --> CAAATTGTAACAATTCAATAACAAAACCGCCACAAACCCAAACCCAAAAC
FD539083       --> CAAATTGTAACAATTCAATAACAAAACCGCCACAAACCCAAACCCAAAAC
EV541835       --> CAAATTGTAACAATTCAATAACAAAACCGCCACAAACCCAAACCCAAAAC
EX908363       --> CAAATCGTAACAATTCAATAACAAAACCGCCACAAACCCAAACCCAAAAC
EV542909       --> CAAATTGTAACAATTCAATAACAAAACCGCCACAAACCCAAACCCAAAAC

               100    -    150
UN21802        --> TATAAATTATAGCCAAAAGACAAAAAA-CAAAACAGAGAAAATTAAATCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY940549       <-- TATAAATTATAGCCAAAAGACAAAAA--CAAAACAGAGAAAATTAAATCA  Raphanus sativus cv Early Scarlet Globe
EX904454       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD543200       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV539021       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV537639       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EW730457       --> TATAAATTATAGCCAAAAGACAAAAA--CAAAACAGAGAAAATTAAATCA  Raphanus sativus cv Early Scarlet Globe
FD539083       --> TATAAATTATAGCCAAAAGACAAAAAA-CAAAACAGAGAAAATTAAATCA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV541835       --> TATAAATTATAGCCAAAAGACAAAAAA-CAAAACAGAGAAAATTAAATCA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX908363       --> TATAAATTATAGCCAAAAGACAAAAA--CAAAACAGAGAAAATTAAATCA  Raphanus sativus cv Rat-Tail Radish #3870
EV542909       --> TATAAATTATAGCCAAAAGACAAAAAAACAAAACAGAGAAAATTAAATCA  Raphanus raphanistrum subsp. raphanistrum (MS)

               150    -    200
UN21802        --> TTCGTCACCATCCTCCCAATTAGCACCCCAAGTCATCCAAGTAGCTCTGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY940549       <-- TTCGTCACCATCCTCCAAATTAGCAGCCCAAGTCATCCAAGTAGCTCTGC
EX904454       <-- .............TCCCAATTAGCACCCCAAGTCATCCAAGTAGCTCTGC
FD543200       <-- ..................................................
EV539021       <-- ..................................................
EV537639       <-- ..................................................
EW730457       --> TTCGTCACCATCCTCCCAATTAGCACCCCAAGTCATCCAAGTAGCTCTGC
FD539083       --> TTCGTCACCATCCTCCCAATTAGCACCCCAAGTCATCCAAGTAGCTCTGC
EV541835       --> TTCGTCACCATCCTCCCAATTAGCACCCCAAGTCATCCAAGTAGCTCTGC
EX908363       --> TTCGTCACCATCCTCCCAATTAGCACCCCAAGTCATCCAAGTAGCTCTGC
EV542909       --> TTCGTCACCATCCTCCCAATTAGCACCCCAAGTCATCCAAGTAGCTCTGC

               200    -    250
UN21802        --> AAATCTTTTAAACCCTCCGCTGAGAAGCTCCGTTGAACCCTCAACCTCGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY940549       <-- AAATCTTTTAAACCCTCCGCTGAGAAGCTCCGTTGAACCCTCAACCTCGG
EX904454       <-- AAATCTTTTAAACCCTCCGCTGAGAAGCTCCGTTGAACCCTCAACCTCGG
FD543200       <-- ..................................................
EV539021       <-- ..................................................
EV537639       <-- ..................................................
EW730457       --> AAATCTTTTAAACCCTCCGCTGAGAAGCTCCGTTGAACCCTCAACCTCGG
FD539083       --> AAATCTTCTAAACCCTCCGCTGAGAAGCTCCGTTGAACCCTCAACCTCGG
EV541835       --> AAATCTTTTAAACCCTCCGCTGAGAAGCTCCGTTGAACCCTCAACCTCGG
EX908363       --> AAATCTTTTAAACCCTCCGCTGAGAAGCTCCGTTGAACCCTCAACCTCGG
EV542909       --> AAATCTTTTAAACCCTCCGCTGAGAAGCTCCGTTGAACCCTCAACCTCGG

               250    -    300
UN21802        --> TGCAACCAAGTTGGGTGGCGGCTGTGGCTGAAGGCACACAACCACCGCCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY940549       <-- TGCAACCAAGTTGGGTGGCGGCTGCGGCTGAAGGCACACAACCACCGCCG  Raphanus sativus cv Early Scarlet Globe
EX904454       <-- TGCAGCCAAGTTGGGTGGCGGCTGTGGCTGAAGGCACACAACCACCGCCG  Raphanus sativus cv Rat-Tail Radish #3870
FD543200       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV539021       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV537639       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EW730457       --> TGCAACCAAGTTGGGTGGCGGCTGCGGCTGAGGGCACACAACCACCGCCG  Raphanus sativus cv Early Scarlet Globe
FD539083       --> TGCAACCAAGTTTGGTGGCGGATGTGGCTGAAGGCACACAACCACCGCAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EV541835       --> TGCAACCAAGTTTGGTGGCGGATGTGGCTGAAGGCACACAACCACCGCAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX908363       --> TGCAGCCAAGTTGGGTGGCGGCTGTGGCTGAAGGCACACAACCACCGCCG  Raphanus sativus cv Rat-Tail Radish #3870
EV542909       --> TGCAACCAAGTTTGGTGGCGGATGTGGCTGAAGGCACACAACCACCGCAG  Raphanus raphanistrum subsp. raphanistrum (MS)

               300    -    350
UN21802        --> TCACATTATCCCCACTCTTCCTCTTCAAAGCTTCTTCAACCAACTCTTTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY940549       <-- TCACATTATCCCCACTCTTCCTCTTCAAAGCTTCTTCAACCAACTCTTTA
EX904454       <-- TCACATTATCCCCACTCTTCCTCTTCAAAGCTTCTTCAACCAACTCTTTA
FD543200       <-- .......................................CCAACTCTTTA
EV539021       <-- ..................................................
EV537639       <-- ..................................................
EW730457       --> CCACATTATCCCCACTCTTCCTCT-CAAAGCTTCTTCAACCAACTCTTTA
FD539083       --> TCACATTATCCCCACTCTTCCACTTCAAAGCTTCTTCAACCAACTCTTTA
EV541835       --> TCACATTATCCCCACTCTTCCTCTTCAAAGCTTCTTCAACCAACTCTTTA
EX908363       --> TCACATTATCCCCACTCTTCCTCTTCAAAGCTTCTTCAACCAACTCTTTA
EV542909       --> TCACATTATCCCCACTCTTCCTCTTCAAAGCTTCTTCAACCAACTCTTTA

               350    -    400
UN21802        --> CTACACATAACCGGGTCATTGTGCTCTTGCAGTCT-C-TCCTAGCGAAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY940549       <-- CTACACATAACCGGGTCATTGTGCTCTTGCAGTCT-CCTCCTAGCGAAAT
EX904454       <-- CTACACATGACCGGGTCATTGTGCTCTTGCAGTCT-CCTCCTAGCGAAAT
FD543200       <-- CTACACATA-CCGGGTCAT-GTGCTCT-GCAGTCT-C-TCCTAGCGAAAT
EV539021       <-- ..................................................
EV537639       <-- ..................................................
EW730457       --> CTACACATAACCGGGTCATTGTGCTCTTGCAGTCT-CCCCCTAGCGAAAT
FD539083       --> CTACACATAACCGGGTCATTGTGCTCCTGCAGTCT-CCTCCTAGCGAAAT
EV541835       --> CAACACATAACCGGGTCATTGTGCTCCTGCAGTCTAC-TCCTAGCGAAAT
EX908363       --> CTACACATGACCGGGTCATTGTGCTCTTGCAGTCT-CCTCCTAGCGAAAT
EV542909       --> CTACACATAACCGGGTCATTGTGCTCCTGCAGTCT-CCTCCTAGCGAAAT

               400    -    450
UN21802        --> CAACAGCGTTCTGGCTCATGAACACATCCCAAACCCCGTCGCAGCCCATT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY940549       <-- CAACAGCGTTCTGGCTCATGAACACATCCCAAACCCCGTCGCAGCCCATT
EX904454       <-- CAACAGCGTTCTGGCTCATGAACACATCCCAAACCCCGTCGCAGCCCATT
FD543200       <-- CAACAGCGT-CTGGCTCATGAACACATCCCAAACCCCATCGCAGCCCAT-
EV539021       <-- ..................................................
EV537639       <-- ..................................................
EW730457       --> CAACAGCGTTCCGGCTCATGAACACATCCCAAACCCCGTCGCAGCCCATT
FD539083       --> CAACAGCGTTCTGGCTCATGAACACATCCCAAACCCCATCGCAGCCCATT
EV541835       --> CAACAGCGTTCTGGCTCATGAACACATCCCAAACCCCGTCGCAGCCCATT
EX908363       --> CAACAGCGTTCTGGCTCATGAACACATCCCAAACCCCGTCGCAGCCCATT
EV542909       --> CAACAGCGTTCTGGCTCATGAACACATCCCAAACCCCATCGCAGCCCATT

               450    -    500
UN21802        --> ATGAGGAACTCGTCCTCTTGCGTTAGTTTAGTCGTCATGAGCTCAGGATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY940549       <-- ATGAGGAACTCGTCCTCTTGCGTTAGTTc.....................
EX904454       <-- ATGAGGAACTCGTCCTCTTGCGTTAGTTTAGTCGTCATGAGCTCAGGATC
FD543200       <-- ATGAGGAACTCGTC-TCTTGCGTTAGTTTAGTCGTCATGAGCTCAGGATC
EV539021       <-- ..................................................
EV537639       <-- ..................................................
EW730457       --> ATGAGGAACTCGTCCTCTTGGGTTAGTTTAGTCGTCATGAGCTCAGGATC
FD539083       --> ATGAGGAACTCGTCCTCTTGCGTTAGTTTAGTCGTCATGAGCTCAGGATC
EV541835       --> ATGAGGAACTCGTCCTCTTGCGTTAGTTTAGTCGTCATGAGCTCAGGATC
EX908363       --> ATGAGGAACTCGTCCTCTTGCGTTAGTTTAGTCGTCATGAGCTCAGGATC
EV542909       --> ATGAGGAACTCGTCCTCTTGCGTTAGTTTAGTCGTCATGAGCTCAGGATC

               500    -    550
UN21802        --> CGCAATGAGAGGTCCACCGTTAGAACCGTCCTTCTTTCTCTTCATGCCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY940549       <-- ..................................................
EX904454       <-- CGCAATGAGAGGTCCGCCGTTAGAACCGTCTTTCTTCCTCTTCATGCCTT
FD543200       <-- CGCAATGAGAGGTCCACCGTTAGAACCGTCCTTCTTTCTCTTCATGCCTT
EV539021       <-- ..................................................
EV537639       <-- ..................................................
EW730457       --> CGCAATGAGAGGTCCGCCGTTAGAACCGTCTTTCTTTCTCTTCATGCCTT
FD539083       --> CGCAATGAGAGGTCCACCGTTAGAACCGTCCTTCTTTCTCTTCATGCCTT
EV541835       --> CGCAATGAGAGGTCCACCGTTAGAACCGTCCTTCTTTCTCTTCATGCCTT
EX908363       --> CGCAATGAGAGGTCCGCCGTTAGAACCGTCTTTCTTCCTCTTCATGCCTT
EV542909       --> CGCAATGAGAGGTCCACCGTTAGAACCGTCCTTCTTTCTCTTCATGCCTT

               550    -    600
UN21802        --> CCATATGAAAATCCCCGAGGGCACGAGCCACATTAAGCTGCCCGTTCAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY940549       <-- ..................................................
EX904454       <-- CCATATGAAAATCCCCGATGGCACGAACCACGTTAAGTTGCCCGTTCAGA
FD543200       <-- CCATATGAAAATCCCCGAGGGCACGAGCCACATTAAGCTGCCCGTTCAGA
EV539021       <-- ..................................................
EV537639       <-- ..................................................
EW730457       --> CCATATGAAAATCCCCGATGGCACGAGCCACATTAAGCTGCTCGTTCAGA
FD539083       --> CCATATGAAAATCCCCGAGGGCACGAGCCACATTAAGCTGCCCGTTCAGA
EV541835       --> CCATATGAAAATCCCCGAGGGCACGAGCCACATTAAGCTGCCCGTTCAGA
EX908363       --> CCATATGAAAATCCCCGATGGCACGAACCACGTTAAGTTGCCCGTTCAGA
EV542909       --> CCATATGAAAATCCCCGAGGGCACGAGCCACATTAAGCTGCCCGTTCAGA

               600    -    650
UN21802        --> TAGCCATCGTATATGTATCCACCCGACGCTTCGATGCGTCTTCTCTCTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY940549       <-- ..................................................
EX904454       <-- TAGCCATCGTATATGTATCCACCCGACGCTTCGATGCGTCTTCTCTCTTT
FD543200       <-- TAGCCATCGTATATGTATCCACCCGACGCTTCGATGCGTCTTCTCTCTTT
EV539021       <-- ..................................................
EV537639       <-- ..................................................
EW730457       --> TAGCCATCGTATATGTATCCGCCCGACGCTTCGATGCGTCTTCTC.....
FD539083       --> TAGCCATCGTATATGTATCCACCCGACGCTTCGATGCGTCTTCTCTCTTT
EV541835       --> TAGCCATCGTATATGTATCCACCCGACGCTTCGATGCGTCTTCTCTCTTT
EX908363       --> TAGCCATCGTATATGTATCCACCCGACGCTTCGATGCGTCTTCTCTCTTT
EV542909       --> TAGCCATCGTATATGTATCCACCCGACGCTTCGATGCGTCTTCTCTCTTT

               650    -    700
UN21802        --> ACAGCTCATGGGTTTGTGGTCCTTTGACATTTCAATGGCTTTGCCCTGAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY940549       <-- ..................................................
EX904454       <-- ACAGCTCATGGGTTTGTGGTCCTTTGACATTTCAATGGCTTTTCCCTGAC
FD543200       <-- ACAGCTCATGGGTTTGTGGTCCTTTGACATTTCAATGGCTTTGCCCTGAC
EV539021       <-- ..................................................
EV537639       <-- ..................................................
EW730457       --> ..................................................
FD539083       --> ACAGCTCATGGGT.....................................
EV541835       --> ACAGCTCATGGGTTTGTGGTCCTTTGACATTTCAATGGCTTTGCCCTGAC
EX908363       --> ACAGCTCATGGGTTTGTGGTCCTTTGACATTTCAATGGCTTTTCCCTGAC
EV542909       --> ACAGCTCATGGGTTTGTGGTCCTTTGACATTTCAATGGCTTTGCCCTGAC

               700    -    750
UN21802        --> GAGACAAGACTGCTCTACAATCTCCAGCGTTTGCCACAACCAACGACCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY940549       <-- ..................................................
EX904454       <-- GAGACAAGACTGCTCTACAATCTCCAGCGTTTGCCACAACCAACGACCTT
FD543200       <-- GAGACAAGACTGCTCTACAATCTCCAGCGTTTGCCACAACCAACGACCTT
EV539021       <-- .................................................T
EV537639       <-- ..................................................
EW730457       --> ..................................................
FD539083       --> ..................................................
EV541835       --> GAGACAAGACTGCTCTACAATCTCCAGCGTTTGCCACAACCAACGACCTT
EX908363       --> GAGACAAGACTGCTCTACAATCTCCAGCGTTTGCCACAACCAACGACCTT
EV542909       --> GAGACAAGACTGCTCTACAATCTCCAGCGTTTGCCACAACCAACGACCTT

               750    -    800
UN21802        --> CCAGTAAGAAGAGCAGCCAAAGCAGTAGTTCCTGAAGAGAGGCTACCATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY940549       <-- ..................................................
EX904454       <-- CCAGTAAGAAGAGCAGCCAAAGCAGTAGTTCCCGGAGAGAGGCTACCATC
FD543200       <-- CCAGTAAGAAGAGCAGCCAAAGCAGTAGTTCCTGAAGAGAGGCTACCATC
EV539021       <-- CCAGTAAGAAGAGCAGCCAAAGCAGTAGTTC-TGAAGAGAGGCTACCATC
EV537639       <-- ..................................................
EW730457       --> ..................................................
FD539083       --> ..................................................
EV541835       --> CCAGTAAGAAGA......................................
EX908363       --> CCAGTAA...........................................
EV542909       --> CCAGTAAGAAGAGCAGCCAAAGCAGTAGTTCCTGAAGAGAGGCTACCATC

               800    -    850
UN21802        --> CAATGCACAAGCCTCTGAGAAGGCAGTGTCTGTTTGAAGGAAAGTTGAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY940549       <-- ..................................................
EX904454       <-- CAATGCACAAGCCTCGGAGAAGGCAGTGTCTGTTcac.............
FD543200       <-- CAATGCACAAGCCTCTGAGAAGGCAGTGTCTGTTTGAAGGAAAGCTGAAG
EV539021       <-- CAATGCACAAGCCTCTGAGAAGGCAGTGTCTGTTTGAAGGAAAGTTGAAG
EV537639       <-- ..................................................
EW730457       --> ..................................................
FD539083       --> ..................................................
EV541835       --> ..................................................
EX908363       --> ..................................................
EV542909       --> CAATG.............................................

               850    -    900
UN21802        --> AAATCACTTTATTGATGTCACTAGGAAACTCTTGATCCTCAACGATGTAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY940549       <-- ..................................................
EX904454       <-- ..................................................
FD543200       <-- AAATCACCTTATTGATGTCACTAGGAAACTCTTGATCCTCAACGATGTAC
EV539021       <-- AAATCACTTTATTGATGTCACTAGGAAACTCTTGATCCTCAACGATGTAC
EV537639       <-- ..................................................
EW730457       --> ..................................................
FD539083       --> ..................................................
EV541835       --> ..................................................
EX908363       --> ..................................................
EV542909       --> ..................................................

               900    -    950
UN21802        --> CTTGGTATATGCTGACACGCGAATTCAGCAGCATGCTTCCCACCGTGTCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY940549       <-- ..................................................
EX904454       <-- ..................................................
FD543200       <-- CTTGGTATATGCTGACACGCGAATTCAGCAGCATGCTTCCCACCGTGTCC
EV539021       <-- CTTGGTATATGCTGACACGCGAATTCAGCAGCATGCTTCCCACCGTGTCC
EV537639       <-- ..................................................
EW730457       --> ..................................................
FD539083       --> ..................................................
EV541835       --> ..................................................
EX908363       --> ..................................................
EV542909       --> ..................................................

               950    -   1000
UN21802        --> ATCGAACACCCCGTAAAAGGCAGTCGGTACATCCTCAGGAGGATCCTCGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY940549       <-- ..................................................
EX904454       <-- ..................................................
FD543200       <-- ATCGAACACCCCGTAAAAGGCAGTCGGTACATCCTCAGGAGGATCCTCGA
EV539021       <-- ATCGAACACCCCGTAAAAGGCAGTCGGTACATCCTCAGGAGGATCCTCGA
EV537639       <-- ..................................................
EW730457       --> ..................................................
FD539083       --> ..................................................
EV541835       --> ..................................................
EX908363       --> ..................................................
EV542909       --> ..................................................

               1000   -   1050
UN21802        --> GACCAAAACTATCCATGAGATTGTCGAGGCATAGGTAAGCATCCTCCATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY940549       <-- ..................................................
EX904454       <-- ..................................................
FD543200       <-- GACCAAAACTATCCATGAGATTGTCGAGGCATAGGTAAGCATCCTCCATG
EV539021       <-- GACCAAAACTATCCATGAGATTGTCGAGGCATAGGTAAGCATCCTCCATG
EV537639       <-- ...CAAAACTATCCATGAGATTGTCGAGGCATAGGTAAGCATCCTCCATG
EW730457       --> ..................................................
FD539083       --> ..................................................
EV541835       --> ..................................................
EX908363       --> ..................................................
EV542909       --> ..................................................

               1050   -   1100
UN21802        --> CTGGACCTGGAGCCGATATCAGACCAAGCTCCGGAACGCATGGCAGGAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY940549       <-- ..................................................
EX904454       <-- ..................................................
FD543200       <-- CTGGACCTGGAGCCGATATCAGACCAAGCTCCGGAACGCATGGCAGGAAC
EV539021       <-- CTGGACCTGGAGCCGA-ATCAGACCAAGCTCCGGAACGCATGGCAGGAAC
EV537639       <-- CTGGACCTGGAGCCGATATCAGACCAAGCTCCGGAACGCATGGCAGGAAC
EW730457       --> ..................................................
FD539083       --> ..................................................
EV541835       --> ..................................................
EX908363       --> ..................................................
EV542909       --> ..................................................

               1100   -   1150
UN21802        --> AAAGTCAATCTTGTCTAGAGCGAACTCGTTCTCAACGGATAAAGCTGACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY940549       <-- ..................................................
EX904454       <-- ..................................................
FD543200       <-- AAAGTCAATCc.......................................
EV539021       <-- AAAGTCAATCTTGTCTAGAGCGAACTCGTTCTCAACGGATAAAGCTGACA
EV537639       <-- AAAGTCAATCTTGTCTAGAGCGAACTCGTTCTCAACGGATAAAGCTGACA
EW730457       --> ..................................................
FD539083       --> ..................................................
EV541835       --> ..................................................
EX908363       --> ..................................................
EV542909       --> ..................................................

               1150   -   1200
UN21802        --> CCTTTGTCTTCACGAGAGATGGGTGTCGAACCAGCGACTTGGGGGCCGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY940549       <-- ..................................................
EX904454       <-- ..................................................
FD543200       <-- ..................................................
EV539021       <-- CCTTTGTCTTCACGAGAGATGGGTGTCGAACCAGCGACTTGGGGGCCGAG
EV537639       <-- CCTTTGTCTTCACGAGAGATGGGTGTCGAACCAGCGACTTGGGGGCCGAG
EW730457       --> ..................................................
FD539083       --> ..................................................
EV541835       --> ..................................................
EX908363       --> ..................................................
EV542909       --> ..................................................

               1200   -   1250
UN21802        --> GTCTGCTGCTGCCTGTATAAGAAGGCGGCGGCGGAGGAAGAGGAGGAAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY940549       <-- ..................................................
EX904454       <-- ..................................................
FD543200       <-- ..................................................
EV539021       <-- GTCTGCTGCTGCCTGTATAAGAAGGCGGCGGCGGAGGAAGAGGAGGAAGA
EV537639       <-- GTCTGCTGCTGCCTGTATAAGAAGGCGGCGGCGGAGGAAGAGGAGGAAGA
EW730457       --> ..................................................
FD539083       --> ..................................................
EV541835       --> ..................................................
EX908363       --> ..................................................
EV542909       --> ..................................................

               1250   -   1300
UN21802        --> GAAGGAGAGAGGATTCGGCGGTAAACCGCCGTAACTCGAACTCCCATTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY940549       <-- ..................................................
EX904454       <-- ..................................................
FD543200       <-- ..................................................
EV539021       <-- GAAGGAGAGAGGATTCGGCGGTAAACCGCCGTAACTCGAACTCCCATTCT
EV537639       <-- GAAGGAGAGAGGATTCGGCGGTAAACCGCCGTAACTCGAACTCCCATTCT
EW730457       --> ..................................................
FD539083       --> ..................................................
EV541835       --> ..................................................
EX908363       --> ..................................................
EV542909       --> ..................................................

               1300   -   1350
UN21802        --> CCGGATCAGAGATTCCTTTAGTTTCTTCCATTGTACAACATCATTGCAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY940549       <-- ..................................................
EX904454       <-- ..................................................
FD543200       <-- ..................................................
EV539021       <-- CCGGATCAGAGATTCCTTTAGTTTCTTCCATTGTACAACATCATTGCAAT
EV537639       <-- C.................................................
EW730457       --> ..................................................
FD539083       --> ..................................................
EV541835       --> ..................................................
EX908363       --> ..................................................
EV542909       --> ..................................................

               1350   -   1400
UN21802        --> CAAATTAAAAGCTAACTTGTGTGGCTAGCTTAGCTTCTCTTATAATAATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY940549       <-- ..................................................
EX904454       <-- ..................................................
FD543200       <-- ..................................................
EV539021       <-- CAAATTAAAAGCTAACTTGTGTGGCTAGCTTAGCTTCTCTTATAATAATC
EV537639       <-- ..................................................
EW730457       --> ..................................................
FD539083       --> ..................................................
EV541835       --> ..................................................
EX908363       --> ..................................................
EV542909       --> ..................................................

               1400   -   1450
UN21802        --> GAATCTGACTAAAAGGAGGAAATGCAGGTAGATTGAAAACAGATTCGTAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY940549       <-- ..................................................
EX904454       <-- ..................................................
FD543200       <-- ..................................................
EV539021       <-- GAATCTGACTAAAAGGAGGAAATGCAGGTAGATTGAAAACAGATTCGTAA
EV537639       <-- ..................................................
EW730457       --> ..................................................
FD539083       --> ..................................................
EV541835       --> ..................................................
EX908363       --> ..................................................
EV542909       --> ..................................................

               1450   -   1500
UN21802        --> TCAATTGGTTTCAGATACTGTTGCAAAATCACGGGAGGGTTCTAGAAAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY940549       <-- ..................................................
EX904454       <-- ..................................................
FD543200       <-- ..................................................
EV539021       <-- TCAATTGGTTTCAGATACTGTTGCAAAATCACGGGAGGGTTCTAGAAAAT
EV537639       <-- ..................................................
EW730457       --> ..................................................
FD539083       --> ..................................................
EV541835       --> ..................................................
EX908363       --> ..................................................
EV542909       --> ..................................................

               1500   -   1550
UN21802        --> TTAGGGTTTCGTGGCAGAAATTAGAACACGAATTTGAGAGAGGGGGGAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY940549       <-- ..................................................
EX904454       <-- ..................................................
FD543200       <-- ..................................................
EV539021       <-- TTAGGGTTTCGTGGCAGAAATTAGAACACGAATTTGAGAGAGGGGGGAAG
EV537639       <-- ..................................................
EW730457       --> ..................................................
FD539083       --> ..................................................
EV541835       --> ..................................................
EX908363       --> ..................................................
EV542909       --> ..................................................

               1550   -   1600
UN21802        --> TAGAGAGAG
                   ~~~~~~~~~
EY940549       <-- .........
EX904454       <-- .........
FD543200       <-- .........
EV539021       <-- TAGAGAGAG
EV537639       <-- .........
EW730457       --> .........
FD539083       --> .........
EV541835       --> .........
EX908363       --> .........
EV542909       --> .........