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Alignment for radish unigene UN21806

               1      -     51
UN21806        --> CTTTTCCTCACCGGAGCTTCTCTGAAGAAGTCTCTGTTCTTGATGGTCAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY445585       <-- CTTTTCCTCACCGGAGCTTCTCTGAAGAAGTCTCTGTTCTTGATGGTCAC
FD942444       <-- ..................................................
FY430373       <-- ..................................................
FD529303       <-- ..................................................
EY935649       <-- ..................................................
FY431516       <-- ..................................................
FY431600       <-- ..................................................
FD983325       <-- ..................................................
FD971605       --> ..................................................
FD972878       --> ..................................................
EY939778       --> ..................................................
FD541057       --> ..................................................
FY446689       --> ..................................................
FY453327       --> ..................................................
EY931447       --> ..................................................

               51     -    101
UN21806        --> TTTACTCAGCTGGGTTTGAACAGCGTTGCCTACTTGATGGGAAATGATGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY445585       <-- TTTACTCAGCTGGGTTTGAACAGCGTTGCCTACTTGATGGGTAATGATGA
FD942444       <-- ...........................................ATGATGA
FY430373       <-- ..................................................
FD529303       <-- ..................................................
EY935649       <-- ..................................................
FY431516       <-- ..................................................
FY431600       <-- ..................................................
FD983325       <-- ..................................................
FD971605       --> .....gCAGCTGGGTTTGAACAGCGTTGCCTACTTGATGGGAAATGATG-
FD972878       --> .....gCAGCTGGGTTTGAACAGCGTTGCCTACTTGATGGGAAATGATG-
EY939778       --> ...........GGGTTTGAACAGCGTTGCCTACTTGATGGGAAATGATGA
FD541057       --> ..................................................
FY446689       --> ..................................................
FY453327       --> ..................................................
EY931447       --> ..................................................

               101    -    151
UN21806        --> CGAGACTAAGAAATGGCATGTCTATGCTGCCTCTGCCCAGTCCTCCAGCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY445585       <-- CGAGACTAAGAAATGGCATGTCTATGCCGCCTCTGCTCAAGCCTCCAGCA
FD942444       <-- CGAGACTAAGAAATGGCATGTCTACGCTGC-TCTGCCCAGTCCTCCAACA
FY430373       <-- ..................................................
FD529303       <-- ..................................................
EY935649       <-- ..................................................
FY431516       <-- ..................................................
FY431600       <-- ..................................................
FD983325       <-- ..................................................
FD971605       --> -G-GACTAAGAAATGGCATGTCTATGCTGCCTCTGCCCAGTCCTCCAGCA
FD972878       --> -G-GACTAAGAAATGGCATGTCTATGCTGCCTCTGCCCAGTCCTCCAGCA
EY939778       --> CGAGACTAAGAAATGGCATGTCTACGCTGCCTCTGCCCAGTCCTCCAGCA
FD541057       --> ..................................................
FY446689       --> ..................................................
FY453327       --> ..................................................
EY931447       --> ..................................................

               151    -    201
UN21806        --> ACTGCACCAACAATGTCTACACGCTCGAGATGTGCATGACTGGTCTTGAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY445585       <-- ACTGCAACAACAATGTCTACACGCTCGAGATGTGCATGACTGGTCTAGAC
FD942444       <-- ACTGCACCAACAATGTCTACACGCTCGAGATGTGCATGACTGGTCTTGAC
FY430373       <-- .............................ATGTGCATGACTGGTCTAGAC
FD529303       <-- ..................................................
EY935649       <-- ..................................................
FY431516       <-- ..................................................
FY431600       <-- ..................................................
FD983325       <-- ..................................................
FD971605       --> ACTGCACCAACAATGTCTACACGCTCGAGATGTGCATGACTGGTCTTGAC
FD972878       --> ACTGCACCAACAATGTCTACACGCTCGAGATGTGCATGACTGGTCTTGAC
EY939778       --> -TTGCACCAACAATGTCTACACGCTCGAGATGTGCATGACTGGTCTTGAC
FD541057       --> ..................................................
FY446689       --> ..................................................
FY453327       --> ..................................................
EY931447       --> ..................................................

               201    -    251
UN21806        --> AGGGAGAAAGCATCTGTCTTCTACAAGAATGGCGAGACTGGATCAATGAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY445585       <-- AGGGAGAAAGCCTCTGTCTTCTACAAGAATGGCGAGACTGGATCAATGAC
FD942444       <-- AGGGAGAAAGCATCTGTCTTCTACAAGAATGGCGAGACTGGATCAATGAC
FY430373       <-- AGGGAGAAAGCCTCTGTCTTCTACAAGAATGGCGAGACTGGATCAATGAC
FD529303       <-- ....AGAAAGCATCTGTCTTCTACAAGAATGGCGAGACTGGATCAATGAC
EY935649       <-- ..........................................TCAATGAC
FY431516       <-- ..................................................
FY431600       <-- ..................................................
FD983325       <-- ..................................................
FD971605       --> AGGGAGAAAGCATCTGTGTTCTACAAGAATGGCGAGACTGGATCAATGAC
FD972878       --> AGGGAGAAAGCATCTGTGTTCTACAAGAATGGCGAGACTGGATCAATGAC
EY939778       --> AGGGAGAAAGCATCTGTCTTCTACAAGAATGGCGAGACTGGATCAATGAC
FD541057       --> ..................................................
FY446689       --> ..................................................
FY453327       --> ..................................................
EY931447       --> ..................................................

               251    -    301
UN21806        --> TGACAACTCTGGAATCAGAAAGATCCTTCCTCATTCCCAGATCTGCGACT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY445585       <-- TGACAACTCTGGAATCAGAAAGATCCTTCCTCAGTCCCAGATCTGCGACT  Raphanus sativus cv GSK3-1
FD942444       <-- TGACAACTCTGGAATCAGAAAGATCCTTCCTCATTCCCAGATCTGCGACT  Raphanus sativus cv Early Scarlet Globe
FY430373       <-- TGACAACTCTGGAATCAGAAAGATCCTTCCTCAGTCCCAGATCTGCGACT  Raphanus sativus cv GSK3-1
FD529303       <-- TGACAACTCTGGAATCAGAAAGATCCTTCCTCATTCCCAGATCTGCGACT  Raphanus raphanistrum subsp. maritimus
EY935649       <-- TGACAACTCTGGAATCAGAAAGATCCTTCCTCATTCCCAGATCTGCGACT  Raphanus sativus cv Early Scarlet Globe
FY431516       <-- ..................................................  Raphanus sativus cv GSK3-1
FY431600       <-- ..................................................  Raphanus sativus cv GSK3-1
FD983325       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD971605       --> TGACAACTCTGCAATCAGAAAGATCCTTCCTCAGTCCCAGATCTGCGACT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD972878       --> TGACAACTCTGCAATCAGAAAGATCCTTCCTCAGTCCCAGATCTGCGACT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY939778       --> TGACAACTCTGGAATCAGAAAGATCCTTCCTCATTCCCAGATCTGCGACT  Raphanus sativus cv Early Scarlet Globe
FD541057       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FY446689       --> ..................................................  Raphanus sativus cv GSK3-1
FY453327       --> ..................................................  Raphanus sativus cv GSK3-1
EY931447       --> ..................................................  Raphanus sativus var. oleiformis

               301    -    351
UN21806        --> TTGAGTTCGAGCCCTGTGGCTACTCTATGAACTCCATTGAAGGAGATGCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY445585       <-- TTGAGTTCGAGCCCTGTGGCTACTCTATGAACTCCATTGAAGGAGATGCG  Raphanus sativus cv GSK3-1
FD942444       <-- TTGAGTTCGAGCCATGTGGCTACTCTATGAACTCCATTGAAGGAGATGCG  Raphanus sativus cv Early Scarlet Globe
FY430373       <-- TTGAGTTCGAGCCCTGTGGCTACTCTATGAACTCCATTGAAGGAGATGCG  Raphanus sativus cv GSK3-1
FD529303       <-- TTGAGTTCGAGCCATGTGGCTACTCTATGAACTCCATTGAAGGAGATGCG  Raphanus raphanistrum subsp. maritimus
EY935649       <-- TTGAGTTCGAGCCATGTGGCTACTCTATGAACTCCATTGAAGGAGATGCG  Raphanus sativus cv Early Scarlet Globe
FY431516       <-- ..................................................  Raphanus sativus cv GSK3-1
FY431600       <-- ..................................................  Raphanus sativus cv GSK3-1
FD983325       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD971605       --> TTGAGTTCGAGCCCTGTGGCTACTCTATGAACTCCATTGAAGGAGATGCG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD972878       --> TTGAGTTCGAGCCCTGTGGCTACTCTATGAACTCCATTGAAGGAGATGCG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY939778       --> TTGAGTTCGAGCCATGTGGCTACTCTATGAACTCCATTGAAGGAGATGCG  Raphanus sativus cv Early Scarlet Globe
FD541057       --> ................................gCCATTGAAGGAGATGCG  Raphanus raphanistrum subsp. raphanistrum (MS)
FY446689       --> ..................................................  Raphanus sativus cv GSK3-1
FY453327       --> ..................................................  Raphanus sativus cv GSK3-1
EY931447       --> ..................................................  Raphanus sativus var. oleiformis

               351    -    401
UN21806        --> ATCTCCACTATCCATGTGACCCCTGAGGATGGGTTTAGCTACGCTAGCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY445585       <-- ATCTCCACTATCCATGTAACCCCTGAGGATGGGTTCAGCTACGCTAGCTT
FD942444       <-- ATCTCCACTATCCATGTGACCCCTGAGGATGGGTTTAGCTACGCTAGCTT
FY430373       <-- ATCTCCACTATCCATGTAACCCCTGAGGATGGGTTCAGCTACGCTAGCTT
FD529303       <-- ATCTCCACTATCCATGTGACCCCTGAGGATGGGTTTAGCTACGCTAGCTT
EY935649       <-- ATCTCCACTATCCATGTGACCCCTGAGGATGGGTTTAGCTACGCTAGCTT
FY431516       <-- ..................................................
FY431600       <-- ..................................................
FD983325       <-- ..................................................
FD971605       --> ATCTCCACTATCCATGTGACCCCTGAGGATGGGTTTAGCTACGCTAGCTT
FD972878       --> ATCTCCACTATCCATGTGACCCCTGAGGATGGGTTTAGCTACGCTAGCTT
EY939778       --> ATCTCCACTATCCATGTGACCCCTGAGGATGGGTTTAGCTACGCTAGCTT
FD541057       --> ATCTCCACTATCCATGTGACCCCTGAGGATGGGTTTAGCTACGCTAGCTT
FY446689       --> ..................................................
FY453327       --> ..................................................
EY931447       --> ..................................................

               401    -    451
UN21806        --> TGAAGCTGTGGGTTATGACTTCAACACTTTGGACCTGAGCCAGCTGGTGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY445585       <-- CGAAGCTGTGGGTTATGACTTCAACACTTTGGACCTGAGCCAGCTGGTTA  Raphanus sativus cv GSK3-1
FD942444       <-- TGAAGCTGTGGGTTATGACTTCAACACTTTGGACCTAAGCCAGCTGGTGA  Raphanus sativus cv Early Scarlet Globe
FY430373       <-- CGAAGCTGTGGGTTATGACTTCAACACTTTGGACCTGAGCCAGCTGGTTA  Raphanus sativus cv GSK3-1
FD529303       <-- TGAAGCTGTGGGTTATGACTTCAACACTTTGGACCTAAGCCAGCTGGTGA  Raphanus raphanistrum subsp. maritimus
EY935649       <-- TGAAGCTGTGGGTTATGACTTCAACACTTTGGACCTAAGCCAGCTGGTGA  Raphanus sativus cv Early Scarlet Globe
FY431516       <-- ..................................................  Raphanus sativus cv GSK3-1
FY431600       <-- ..................................................  Raphanus sativus cv GSK3-1
FD983325       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD971605       --> TGAAGCTGTAGGTTATGACTTCAACACTTTGGACCTGAGCCAGCTGGTGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD972878       --> TGAAGCTGTAGGTTATGACTTCAACACTTTGGACCTGAGCCAGCTGGTGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY939778       --> TGAAGCTGTGGGTTATGACTTCAACACTTTGGACCTAAGCCAGCTGGTGA  Raphanus sativus cv Early Scarlet Globe
FD541057       --> TGAAGCTGTAGGTTATGACTTCAACACTTTGGACCTGAGCCAGCTGGTGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FY446689       --> ..................................................  Raphanus sativus cv GSK3-1
FY453327       --> ..................................................  Raphanus sativus cv GSK3-1
EY931447       --> ..................................................  Raphanus sativus var. oleiformis

               451    -    501
UN21806        --> CAAGGGTTCTGTCCTGCTTTGAGCCAAAGCAATTCTCTGTGGCTGTGCAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY445585       <-- CTAGGGTTCTGTCCTGCTTTGAGCCAAAGCAATTCTCTGTGGCTGTGCAC
FD942444       <-- CAAGGGTTCTGTCCTGCTTTGAGCCAAAGCAATTCTCTGTGGCTGTGCAC
FY430373       <-- CTAGGGTTCTGTCCTGCTTTGAGCCAAAGCAATTCTCTGTGGCTGTGCAC
FD529303       <-- CAAGGGTTCTGTCCTGCTTTGAGCCAAAGCAATTCTCTGTGGCTGTGCAC
EY935649       <-- CAAGGGTTCTGTCCTGCTTTGAGCCAAAGCAATTCTCTGTGGCTGTGCAC
FY431516       <-- ..................................................
FY431600       <-- ..................................................
FD983325       <-- ..................................................
FD971605       --> CAGGGGTTCTGTCCTGCTTTGAGCCAAAGCAATTCTCTGTGGCTGTGCAC
FD972878       --> CAGGGGTTCTGTCCTGCTTTGAGCCAAAGCAATTCTCTGTGGCTGTGCAC
EY939778       --> CAAGGGTTCTGTCCTGCTTTGAGCCAAAGCAATTCTCTGTGGCTGTGCAC
FD541057       --> CAAGGGTTCTGTCCTGCTTTGAGCCAAAGCAATTCTCTGTGGCTGTGCAC
FY446689       --> ..................................................
FY453327       --> ..................................................
EY931447       --> ..................................................

               501    -    551
UN21806        --> TCTAGCGTTGGAGTGAACGCGTACAAGCCTGAGATCAGTGTGGACTTGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY445585       <-- TCGAGCGTTGGAGTGAACGCGTACAAGCCTGAGATCAGTGTGGACTTGGA  Raphanus sativus cv GSK3-1
FD942444       <-- TCTAGCGTTGGAGTTAACGCGTACAAGCCTGAGATCAGTGTGGACTTGGA  Raphanus sativus cv Early Scarlet Globe
FY430373       <-- TCGAGCGTTGGAGTGAACGCGTACAAGCCTGAGATCAGTGTGGACTTGGA  Raphanus sativus cv GSK3-1
FD529303       <-- TCTAGCGTTGGAGTTAACGCGTACAAGCCTGAGATCAGTGTGGACTTGGA  Raphanus raphanistrum subsp. maritimus
EY935649       <-- TCTAGCGTTGGAGTTAACGCGTACAAGCCTGAGATCAGTGTGGACTTGGA  Raphanus sativus cv Early Scarlet Globe
FY431516       <-- .....CGTTGGAGTGAACGCGTACAAGCCTGAGATCAGTGTGGACTTGGA  Raphanus sativus cv GSK3-1
FY431600       <-- .....CGTTGGAGTGAACGCGTACAAGCCTGAGATCAGTGTGGACTTGGA  Raphanus sativus cv GSK3-1
FD983325       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD971605       --> TCTAGCGTTGGAGTGAACGCGTACAAGCCTGAGATCAGTGTGGACTTGGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD972878       --> TCTAGCGTTGGAGTGAACGCGTACAAGCCTGAGATCAGTGTGGACTTGGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY939778       --> TCTAGCGTTGGAGTTAACGCGTACAAGCCTGAGATCAGTGTGGACTTGGA  Raphanus sativus cv Early Scarlet Globe
FD541057       --> TCTAGCGTTGGAGTGAACGCGTACAAGCCTGAGATCAGTGTGGACTTGGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FY446689       --> ..................................................  Raphanus sativus cv GSK3-1
FY453327       --> ..................................................  Raphanus sativus cv GSK3-1
EY931447       --> ..................................................  Raphanus sativus var. oleiformis

               551    -    601
UN21806        --> AGATTACGGGTGCAGGGAGAGGACATTTGAGTGTCTAGGAGAGGAGAGTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY445585       <-- AGATTACGGGTGCAGGGAGAGGACATTTGAGTGTCTAGGAGAGGAGAGTG
FD942444       <-- AGATTACGGGTGCAGGGAGGGGACATTTGAGTGTCTAGGAGAGGAGAGTG
FY430373       <-- AGATTACGGGTGCAGGGAGAGGACATTTGAGTGTCTAGGAGAGGAGAGTG
FD529303       <-- AGATTACGGGTGCAGGGAGAGGACATTTGAGTGTCTAGGAGAGGAGAGTG
EY935649       <-- AGATTACGGGTGCAGGGAGAGGACATTTGAGTGTCTAGGAGAGGAGAGTG
FY431516       <-- AGATTACGGGTGCAGGGAGAGGACATTTGAGTGTCTAGGAGAGGAGAGTG
FY431600       <-- AGATTACGGGTGCAGGGAGAGGACATTTGAGTGTCTAGGAGAGGAGAGTG
FD983325       <-- ..............GGGAGAGGACATTTGAGTGTCTAGGAGAGGAGAGTG
FD971605       --> AGATTACGGGTGCAGGGAGAGGACATTTGAGTGTCTAGGAGAGGAGAGTG
FD972878       --> AGATTACGGGTGCAGGGAGAGGACATTTGAGTGTCTAGGAGAGGAGAGTG
EY939778       --> AGATTACGGGTGCAGGGAGAGGACATTTGAGTGTCTAGGAGAGGAGAGTG
FD541057       --> AGATTACGGGTGCAGGGAGAGGACATTTGAGTGTCTAGGAGAGGAGAGTG
FY446689       --> ..................................................
FY453327       --> ..................................................
EY931447       --> ..................................................

               601    -    651
UN21806        --> GAACGGTGATGTATCAGACGTTTGAGAAGCTAGGCAAGTACTGTGGGTCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY445585       <-- GAACGGTGATGTATCAGACGTTTGAGAAGCTAGGCAAGTACTGTGGGTCG
FD942444       <-- GAACGGTGATGTATCAGACGTTTGAGAAGCTAGGCAAGTACTGTGGGTCG
FY430373       <-- GAACGGTGATGTATCAGACGTTTGAGAAGCTAGGCAAGTACTGTGGGTCG
FD529303       <-- GAACGGTGATGTATCAGACGTTTGAGAAGCTAGGCAAGTACTGTGGGTCG
EY935649       <-- GAACGGTGATGTATCAGACGTTTGAGAAGCTAGGCAAGTACTGTGGGTCG
FY431516       <-- GAACGGTGATGTATCAGACGTTTGAGAAGCTAGGCAAGTACTGTGGGTCG
FY431600       <-- GAACGGTGATGTATCAGACGTTTGAGAAGCTAGGCAAGTACTGTGGGTCG
FD983325       <-- GAACGGTGATGTATCAGACGTTTGAGAAGCTAGGCAAGTACTGTGGGTCG
FD971605       --> GAACGGTGATGTATCAGACGTTTGAGAAGCTAGGCAAGTACTGTGGGTCG
FD972878       --> GAACGGTGATGTATCAGACGTTTGAGAAGCTAGGCAAGTACTGTGGGTCG
EY939778       --> GAACGGTGATGTATCAGACGTTTGAGAAGCTAGGCAAGTACTGTGGGTCG
FD541057       --> GAATGGTGATGTATCAGACGTTTGAGAAGCTAGGCAAGTACTGTGGGTCG
FY446689       --> ..................................................
FY453327       --> ..................................................
EY931447       --> ..................................................

               651    -    701
UN21806        --> CCTAGATCTACGTTGAAGTGTGAGTGGAGCAGCAACAATAGTAGCTGCAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY445585       <-- CCTAGATCTACGTTGAAGTGTGAGTGGAGCAGCAACAATAGTAGCTGCAG
FD942444       <-- CCTAGATCTACGTTGAAGTGTGAGTGGAGCAGCAACAATAGTAGCTGCAG
FY430373       <-- CCTAGATCTACGTTGAAGTGTGAGTGGAGCAGCAACAATAGTAGCTGCAG
FD529303       <-- CCTAGATCTACGTTGAAGTGTGAGTGGAGCAGCAACAATAGTAGCTGCAG
EY935649       <-- CCTAGATCTACGTTGAAGTGTGAGTGGAGCAGCAACAATAGTAGCTGCAG
FY431516       <-- CCTAGATCTACGTTGAAGTGTGAGTGGAGCAGCAACAATAGTAGCTGCAG
FY431600       <-- CCTAGATCTACGTTGAAGTGTGAGTGGAGCAGCAACAATAGTAGCTGCAG
FD983325       <-- CCTAGATCTACGTTGAAGTGTGAGTGGAGCAGCAACAATAGTAGCTGCAG
FD971605       --> CCTAGATCTACGTTGAAGTGTGAGTGGAGCAGCAACAATAGTAGCTGCAG
FD972878       --> CCTAGATCTACGTTGAAGTGTGAGTGGAGCAGCAACAATAGTAGCTGCAG
EY939778       --> CCTAGATCTACGTTGAAGTGTGAGTGGAGCAGCAACAATAGTAGCTGCAG
FD541057       --> CCTAGATCTACGTTGAAGTGTGAGTGGAGCAGCAACAATAGTAGCTGCAG
FY446689       --> ....................TGAGTGGAGCAGCAACAATAGTAGCTGCAG
FY453327       --> ..................................................
EY931447       --> ..................................................

               701    -    751
UN21806        --> CAGCGAGGACGAGAAGGACGAGGGAATCTAGCAGAACTTTATTATCTAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY445585       <-- CAGCGAGGACGAGAAGGACGAGGGAATCTAGCAGAACTTTATTATCTAAA
FD942444       <-- CAGCGAGGACGAGAAGGACGAGGGAATCTAGCAGAACTTTATTATCTAAA
FY430373       <-- CAGCGAGGACGAGAAGGACGAGGGAATCTAGCAGAACTTTATTATCTAAA
FD529303       <-- CAGCGAGGACGAGAAGGACGAGGGAATCTAGCAGAACTTTATTATCTAAA
EY935649       <-- CAGCGAGGACGAGAAGGACGAGGGAATCTAGCAGAACTTTATTATCTAAA
FY431516       <-- CAGCGAGGACGAGAAGGACGAGGGAATCTAGCAGAACTTTATTATCTAAA
FY431600       <-- CAGCGAGGACGAGAAGGACGAGGGAATCTAGCAGAACTTTATTATCTAAA
FD983325       <-- CAGCGAGGACGATAAGGACGAGGGAATCTAGCAGAACTTTATTATCTAAA
FD971605       --> CAGCGAGGACGAGAAG-ACGAGGGAATCTAGCAGA-CTTTATTATCTAAA
FD972878       --> CAGCGAGGACGAGAAAGACGAGGGAATCTAGCAGA-CTTTATTATCTAAA
EY939778       --> CAGCGAGGACGAGAAAGACGAGGGAATCTAGCAGAACTTTATTATCTAAA
FD541057       --> CAGCGAGGACGAGAAGGACGAGGGAATCTAGCAGAACTTTATTATCTAAA
FY446689       --> CAGCGAGGACGAGAAGGACGAGGGAATCTAGCAGAACTTTATTATCTAAA
FY453327       --> ..................................................
EY931447       --> ..................................................

               751    -    801
UN21806        --> ACTACTTTTGAGCTTCT-TTTTTTTTTTT-GCTTTGTTTTATTTAATAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY445585       <-- ACTACTTTTGAGCTTTT-TTTTTTTTTTT-GCTTTGTTTTATTTAATAAT  Raphanus sativus cv GSK3-1
FD942444       <-- ACTACTTTTGAGCTTCT-ATTTTTTTTT--GCTTTGTTTTATTTAATAAT  Raphanus sativus cv Early Scarlet Globe
FY430373       <-- ACTACTTTTGAGCTT-T-TTTTTTTTTTT-GCTTTGTTTTATTTAATAAT  Raphanus sativus cv GSK3-1
FD529303       <-- ACTACTTTTGAGCTTCTATTTTTTTTTTT-GCTTTGTTTTATTTAATAAT  Raphanus raphanistrum subsp. maritimus
EY935649       <-- ACTACTTTTGAGCTTCT-ATTTTTTT--T-GCTTTGTTTTATTTAATAAT  Raphanus sativus cv Early Scarlet Globe
FY431516       <-- ACTACTTTTGAGCTTTT-TTTTTTTTTTTTGCTTTGTTTTATTTAATAAT  Raphanus sativus cv GSK3-1
FY431600       <-- ACTACTTTTGAGCTTTT-TTTTTTTTTTTTGCTTTGTTTTATTTAATAAT  Raphanus sativus cv GSK3-1
FD983325       <-- ACTACTTTTGAGCTTCT-ATTTTTTTTTT-GCTTTGTTTTATTTAATAAT  Raphanus raphanistrum subsp. landra
FD971605       --> ACTACTTTTGAGCTTCT.................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD972878       --> ACTACTTTTGAGCTTCT-TTTTTTCTTT--GCTTTGTTT-ATTTAATAAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY939778       --> ACTACTTTTGAGCTTCTat...............................  Raphanus sativus cv Early Scarlet Globe
FD541057       --> ACTACTTTTGAGCTTCT-TTTTTTTCTTC-GCTTTGTTTTATTTAATAAT  Raphanus raphanistrum subsp. raphanistrum (MS)
FY446689       --> ACTACTTTTGAGCTTTT-TTTTTTTTTTTTGCTTTGTTTTATTTAATAAT  Raphanus sativus cv GSK3-1
FY453327       --> ..............................GCTTTGTTT-ATTTAA-AAT  Raphanus sativus cv GSK3-1
EY931447       --> ............................................AATAAT  Raphanus sativus var. oleiformis

               801    -    851
UN21806        --> GAATAAATACTTGTGAAGCTGAGGTACTCTCCTTCATAAGAATGTGTGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY445585       <-- GAATAAATACTTGTGAAGCTGAGGTACTCTCCTTCATAAGAATGTGTGTT  Raphanus sativus cv GSK3-1
FD942444       <-- GAATAAATACTTGTGAAGCTGAGGTACTCTCCTTCATAAGCATGTGTGTT  Raphanus sativus cv Early Scarlet Globe
FY430373       <-- GAATAAATACTTGTGAAGCTGAGGTACTCTCCTTCATAAGAATGTGTGTT  Raphanus sativus cv GSK3-1
FD529303       <-- GAATAAATACTTGTGAAGCTGAGGTACTCTCCTTCATAAGCATGTGTGTT  Raphanus raphanistrum subsp. maritimus
EY935649       <-- GAATAAATACTTGTGAAGCTGAGGTACTCTCCTTCATAAGCATGTGTGTT  Raphanus sativus cv Early Scarlet Globe
FY431516       <-- GAATAAATACTTGTGAAGCTGAGGTACTCTCCTTCATAAGAATGTGTGTT  Raphanus sativus cv GSK3-1
FY431600       <-- GAATAAATACTTGTGAAGCTGAGGTACTCTCCTTCATAAGAATGTGTGTT  Raphanus sativus cv GSK3-1
FD983325       <-- GAATAAATACTTGTGAAGCTGAGGTACTCTCCTTCATA............  Raphanus raphanistrum subsp. landra
FD971605       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD972878       --> GAATAAATACTTGTGAAGCTGAGtact.......................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY939778       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD541057       --> GAATAAATACTTGTGAAGCTGAGGTACTC--CTTCATAAGCATGTGTGTT  Raphanus raphanistrum subsp. raphanistrum (MS)
FY446689       --> GAATAAATACTTGTGAAGCTGAGGTACTCTCCTTCATAAGAATGTGTGTT  Raphanus sativus cv GSK3-1
FY453327       --> GAATAAATACTTGTGAAGCTGAGGTACTCTCCTTCATAAGAATGTGTGTT  Raphanus sativus cv GSK3-1
EY931447       --> GAATAATTACTTGTGAAGCTGAGGTACTCTCCTTCATAAGAATGTGTGTT  Raphanus sativus var. oleiformis

               851    -    901
UN21806        --> GTGTTTTCTTAATTTATATGAATTCTGGTTTTAATATATAAGACTGTTAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY445585       <-- GTG...............................................
FD942444       <-- GTGTTTTCTTAATTTATATGAATTCTGGTTTTAATATATAAGACTGTTAT
FY430373       <-- GTGTTTTCTTAATTTATATGAATTCTGGTTTTAATATATAAGAC......
FD529303       <-- GTGTTTTCTTAATTTATATGAATTCTGGTTTTAATATATAAGACTGTTAT
EY935649       <-- GTGTTTTCTTAATTTATATGAATTCTGGTTTTAATATATAAGACTGTTAT
FY431516       <-- GTGTTTTCTTAATTTATATGAATTCTGGTTTTAATATATAAGACTGTTAT
FY431600       <-- GTGTTTTCTTAATTTATATGAATTCTGGTTTTAATATATAAGACTGTTAT
FD983325       <-- ..................................................
FD971605       --> ..................................................
FD972878       --> ..................................................
EY939778       --> ..................................................
FD541057       --> GTGTTTTCTTAATTTATATGAATTCTGGTTTTAATATATAAGACTGTTAT
FY446689       --> GTGTTTTCTTAATTTATATGAATTCTGGTTTTAAT...............
FY453327       --> GTGTTTTCTTAATTTATATGAATTCTGGTTTTAATATATAAGACTGTTAT
EY931447       --> GTGTTTTCTTAATTTATATGAATTCTGGTTTTAATATATAAGACTGTTAT

               901    -    951
UN21806        --> GTTTGCTCTTATGATCTATGCCTTTTTATATT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY445585       <-- ................................
FD942444       <-- GTTTGCTCc.......................
FY430373       <-- ................................
FD529303       <-- GTcc............................
EY935649       <-- GTTTGCc.........................
FY431516       <-- GTTgctc.........................
FY431600       <-- GTTgct..........................
FD983325       <-- ................................
FD971605       --> ................................
FD972878       --> ................................
EY939778       --> ................................
FD541057       --> GTTTGCTCT.......................
FY446689       --> ................................
FY453327       --> GTTTGCTCTT......................
EY931447       --> GTTTGCTCTTATGATCTATGCCTTTTTATATT