1      -     51
UN21828        --> CAAACATTATGTTGTTTTGTATTAAGTAAAGTACTGTATTGTTTATTTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY923636       <-- ..................................................
EY901328       <-- ..................................................
FD563330       <-- ..................................................
FD542828       <-- ..................................................
FD556296       <-- ..................................................
FY431556       <-- ..................................................
FD551125       <-- ..................................................
FD569058       <-- ..................................................
EX746584       <-- ..................................................
EW717907       <-- ..................................................
EY919412       --> CAAACATTATGTTGTTTTGTATTAAGTAAAGTACTGTATTGTTTATTTTT
FD566994       --> .......................AAGTAAAGTACTGTATTGTTTATTTTT
EY896665       --> ..................................................
FD538799       --> ..................................................
FD552628       --> ..................................................
EW720843       --> ..................................................
FD573327       --> ..................................................
EX750953       --> ..................................................

               51     -    101
UN21828        --> ATTTGAAGGTTCGGAGCGACAAGATAAGGATTGTAATCAATCATCTACTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY923636       <-- ..........TCGGAGCGACAAGATAAGGATTGTAATCAATCATCTACTT
EY901328       <-- ...........................GGATTGTAATCAATCATCTACTT
FD563330       <-- ..................................................
FD542828       <-- ..................................................
FD556296       <-- ..................................................
FY431556       <-- ..................................................
FD551125       <-- ..................................................
FD569058       <-- ..................................................
EX746584       <-- ..................................................
EW717907       <-- ..................................................
EY919412       --> ATTTGAAGGTTCGGAGCGACAAGATAAGGATTGTAATCAATCATCTACTT
FD566994       --> ATTTGAAGGTTTGGAGCGGCAAGATAAGGATTGTAATCAATCATCTACTT
EY896665       --> ...........................GGATTGTAATCAATCATCTACTT
FD538799       --> ...........................GGATTGTAATCAATCATCTACTT
FD552628       --> ............................ggTTGTAATCAATCATCTACTT
EW720843       --> ................................GTAATCAATCATCTACTT
FD573327       --> ................................GTAATCAATCATCTACTT
EX750953       --> ..................................................

               101    -    151
UN21828        --> GAATAATTAAAACAATACACATGACAAGAAACTTAGAACTTTAAGACCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY923636       <-- GAATAATTAAAACAATACATATGACAAGAAACTTAGAACTTTAAGACTAA
EY901328       <-- GAATAATTAAAACAATACACACGAGAAGAAACTTGGAACTTTAAGATCAA
FD563330       <-- ..................................................
FD542828       <-- ..................................................
FD556296       <-- ..................................................
FY431556       <-- ..................................................
FD551125       <-- ..................................................
FD569058       <-- ..................................................
EX746584       <-- ..................................................
EW717907       <-- ..................................................
EY919412       --> GAATAATTAAAACAATACATATGACAAGAAACTTAGAACTTTAAAACTAA
FD566994       --> GAATAATTAAAACAATACACATGACAAGAAACTTAAAACTTTAAAACCAG
EY896665       --> GAATAATTAAAACAATACACACGAGAAGAAACTTGGAACTTTAAGATCAA
FD538799       --> GAATAATTAAAACAATACACATGACAAGAAACTTAGAACTT-AAGACCAA
FD552628       --> GAATAATTAAAACAATACACATGACAATAAACTTAGAACTT-AAGACCGA
EW720843       --> GAATAATTAAAACAATACACATGACAAGAAACTTAGAACTTTAAGACCAA
FD573327       --> GAATAATTAAAACAATACACATGACAAGAAACTTAGAACTTTAAGACCAA
EX750953       --> ...............................................cgA

               151    -    201
UN21828        --> ACTGAAATGAAAATGAATTGTTC-AAAA-A-CTAAAGACTAAAAAAGAGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY923636       <-- ACTGAAATGAAAATGAATTGTTCTGAAA-A-CTAAAGACTAAAAAAGAGT  Raphanus raphanistrum subsp. landra
EY901328       <-- ACTGAAATGAAAATGAATTGTTC-AAAA-AGCTAAAGACTAAAAAAGAGT  Raphanus raphanistrum subsp. maritimus
FD563330       <-- ..................atgTC-AAAAGA-CTAAAGACTAAAAA-GAGT  Raphanus sativus var. oleiformis
FD542828       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD556296       <-- ..................................................  Raphanus raphanistrum subsp. landra
FY431556       <-- ..................................................  Raphanus sativus cv GSK3-1
FD551125       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD569058       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EX746584       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EW717907       <-- ..................................................  Raphanus sativus var. oleiformis
EY919412       --> ACTGAAATGAAAATGAATTGTTCTGAAA-A-CTAAAGACTAAAAAAGAGT  Raphanus raphanistrum subsp. landra
FD566994       --> ACTGAAATGTAAATGAATTGTTC-AAAAGA-CTAAAGACTAAAAAAGAGT  Raphanus sativus var. oleiformis
EY896665       --> ACTGAAATGAAAATGAATTGTTC-AAAA-AGCTAAAGACTAAAAAAGAGT  Raphanus raphanistrum subsp. maritimus
FD538799       --> ACTGAAATGAAAATGAATTGTTC-AAAAGA-CTAAAGACTAAAAAAGAGT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD552628       --> ACTGAAATGAAAATGAATTGTTCTGAAA-A-CTAAAGACTAAAAAAGAGT  Raphanus raphanistrum subsp. landra
EW720843       --> ACTGAAATGTAAATGAATTGCTC-AAAAGA-CTAAAGACTAAAAAAGAGT  Raphanus sativus var. oleiformis
FD573327       --> ACTGAAATGTAAATGAATTGTTC-AAAAGA-CTAAAGACTAAAAAAGAGT  Raphanus sativus cv Early Scarlet Globe
EX750953       --> ACTGAAATGAAAATGAATTGTTC-AAAA-AGCTAAAGACTAAAAAAGAGT  Raphanus raphanistrum subsp. maritimus

               201    -    251
UN21828        --> GGAGTGGTGGTG---CAAAAGAGCCAATGTTTGAGAGTCTTTTT--CTCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY923636       <-- GGAGTGGTGGTG---CAAAAGAGCCAATGTTTGAGAGTCTTTTT--CTCA  Raphanus raphanistrum subsp. landra
EY901328       <-- GGAGTGGTGGTG---CAAAAGAGCCAATGTTTGAGAGTCTTTT---ATCA  Raphanus raphanistrum subsp. maritimus
FD563330       <-- GGAGTG-T-GTG---CAAAAGAGCCAATGTT-GAGAGTCTTTT---CTCA  Raphanus sativus var. oleiformis
FD542828       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD556296       <-- ..................................................  Raphanus raphanistrum subsp. landra
FY431556       <-- ..................................................  Raphanus sativus cv GSK3-1
FD551125       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD569058       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EX746584       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EW717907       <-- ..................................................  Raphanus sativus var. oleiformis
EY919412       --> GGAGTGGTGGTG---CAAAAGAGCCAATGTTTGAGAGTCTTTTT--CTCA  Raphanus raphanistrum subsp. landra
FD566994       --> GGAGTGGTGGTG---CAAAAGAGCCAATGTTTGAAAGTCTTTTT--CTCA  Raphanus sativus var. oleiformis
EY896665       --> GGAGTGGTGGTG---CAAAAGAGCCAATGTTTGAGAGTCTTTT---ATCA  Raphanus raphanistrum subsp. maritimus
FD538799       --> GGAGTGGTGGTGGTGCAAAAGAGCCAATGTTTGAGAGTCTTTTTTTCTCA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD552628       --> GGAGTGGTGGTG---CAAAAGAGCCAATGTTTGAGAGTCTTTTT--ATCA  Raphanus raphanistrum subsp. landra
EW720843       --> GGAGTGGTGGTG---CAAAAGAGCCAATGTTTGAGAGTCTTTTT--CTCA  Raphanus sativus var. oleiformis
FD573327       --> GGAGGGGGGGTG---CAAAAGAGCCAATGTTTGAGAGTCTTTTT--CTCA  Raphanus sativus cv Early Scarlet Globe
EX750953       --> GGAGTGGTGGTG---CAAAAGAGCCAATGTTTGAGAGTCTTTTT--ATCA  Raphanus raphanistrum subsp. maritimus

               251    -    301
UN21828        --> CTCTCAAACTCTTTATTTTTGATTT-CATCTTCCTAAAATCAAATATCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY923636       <-- CTCTCAAACTCTTTATTTTTGATTT-CATCTTCCTAAAATCAAATATCAA  Raphanus raphanistrum subsp. landra
EY901328       <-- CTCACAAACTCTTTATTTTTGATTT-CATCTTCCTAAAATCAAATATCAA  Raphanus raphanistrum subsp. maritimus
FD563330       <-- CTCTCAAACTCTTTATTTT-GATTTTCATCTTC-TAAAATCAAATATCAA  Raphanus sativus var. oleiformis
FD542828       <-- ..............................cTCCTAAA-TCAAATATCAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD556296       <-- ..................................................  Raphanus raphanistrum subsp. landra
FY431556       <-- ..................................................  Raphanus sativus cv GSK3-1
FD551125       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD569058       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EX746584       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EW717907       <-- ..................................................  Raphanus sativus var. oleiformis
EY919412       --> CTCTCAAACTCTTTATTTTTGATTT-CATCTTCCTAAAATCAAATATCAA  Raphanus raphanistrum subsp. landra
FD566994       --> CTCTCAAACTCTTTATTTT-GATTTTCATCTTCCTAAAATCAAATATCAA  Raphanus sativus var. oleiformis
EY896665       --> CTCACAAACTCTTTATTTTTGATTT-CATCTTCCTAAAATCAAATATCAA  Raphanus raphanistrum subsp. maritimus
FD538799       --> CTCTCAAACTCTTTATTTTTGATTT-CATCTTCCTAAAATCAAATATCAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD552628       --> CTCTCAAACTCTTTATTTTTGATTT-CATCTTCCTAAAATCAAATATCAA  Raphanus raphanistrum subsp. landra
EW720843       --> CTCTCAAACTCTTTATTTT-GATTTTCATCTTCCTAAAATCAAATATCAA  Raphanus sativus var. oleiformis
FD573327       --> CTCTCAAACTCTTTATTTT-GATTTTCATCTTCCTAAAATCAAATATCAA  Raphanus sativus cv Early Scarlet Globe
EX750953       --> CTCTCAAACTCTTTATTTTTGATTT-CATCTTCCTAAAATCAAATATCAA  Raphanus raphanistrum subsp. maritimus

               301    -    351
UN21828        --> AAACCCCTTTTGTTGTTTATATGTTGGTGGGAGCTGATTTCTCAGGCCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY923636       <-- AAACCCCTTTTGTTGTTTATATGTTGGTGGGAGCTGATTTCTCAGGCCAA
EY901328       <-- AAACCCCTTTTGTTGTTTATATGTTGGTGGGAGCTGATTTCTCAGGCCAA
FD563330       <-- AAACC--CTTTGTTGTTTATATGTTGGTGGGAGCTGATTTCTCAGGCCAA
FD542828       <-- A--ACCCTTTTGCTGTT-ATATGTTGGTGGGAGCTGATT-CTCAGGCCAA
FD556296       <-- ..................................................
FY431556       <-- ..................................................
FD551125       <-- ..................................................
FD569058       <-- ..................................................
EX746584       <-- ..................................................
EW717907       <-- ..................................................
EY919412       --> AAACCCCTTTTGTTGTTTATATGTTGGTGGGAGCTGATTTCTCAGGCCAA
FD566994       --> AAACCCCTTT-GTTGTTTATATGTTGGTGGGAGCTGATTTCTCAGGCCAA
EY896665       --> AAACCCCTTTTGTTGTTTATATGTTGGTGGGAGCTGATTTCTCAGGCCAA
FD538799       --> AAACCCCTTTTGCTGTTTATATGTTGGTGGGAGCTGATTTCTCAGGCCAA
FD552628       --> AAACCCCTTTTGTTGTTTATATGTTGGTGGGAGCTGATTTCTCAGGCCAA
EW720843       --> AAACCCCTTT-GTTGTTTATATGTTGGTGGGAGCTGATTTCTCAGGCCAA
FD573327       --> AAACCC-TTTTGTTGTTTATATGTTGGTGGGAGCTGATTTCTCAGGCCAA
EX750953       --> AAACCCCTTTTGTTGTTTATATGTTGGTGGGAGCTGATTTCTCAGGCCAA

               351    -    401
UN21828        --> CTGCTAGTAGATTCTCCAAGAGAACCGTTTCCACCATCTTCCTCTTGAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY923636       <-- CTGCTAGTAGATTCTCCAAGAGAACCATTTCCACCATCTTCCTCTTGAGA  Raphanus raphanistrum subsp. landra
EY901328       <-- CTGCTAGTAGATTCTCCAAGAGAACCGTTCCCACCATCTTCCTCTTGAGA  Raphanus raphanistrum subsp. maritimus
FD563330       <-- CTGCTAGTAGATTCTCCAAGAGAACCGTTTCCACCATCTTCCTCTTGAGA  Raphanus sativus var. oleiformis
FD542828       <-- CTGCTAGTAGAT-CTCCAAGAGAAC-GTTTTCACCA-CTTCCTCTTGAGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD556296       <-- ..................................................  Raphanus raphanistrum subsp. landra
FY431556       <-- ..................................................  Raphanus sativus cv GSK3-1
FD551125       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD569058       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EX746584       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EW717907       <-- ..................................................  Raphanus sativus var. oleiformis
EY919412       --> CTGCTAGTAAATTCTCCAAGAAAACCATTTCCACCATCTTCCTCTTGAGA  Raphanus raphanistrum subsp. landra
FD566994       --> CTGCTAGTAAATTCTCCAAGAGAACCGTTTCCACCATCTTCCTCTTGAGA  Raphanus sativus var. oleiformis
EY896665       --> CTGCTAGTAGATTCTCCAAGAGAACCGTTCCCACCATCTTCCTCTTGAGA  Raphanus raphanistrum subsp. maritimus
FD538799       --> CTGCTAGTAAATTCTCCAAGAAAACCGTTTTCACCACCTTCCTCTTGAGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD552628       --> CTGCTAGTAGATTCTCCAAGAAAACCGTTCCCACCATCTTCCTCTTGAGA  Raphanus raphanistrum subsp. landra
EW720843       --> CTGCTAGTAGATTCTCCAAGAGAACCGTTTCCACCATCTTCCTCTTGAGA  Raphanus sativus var. oleiformis
FD573327       --> CTGCTAGTAGATTCTCCAAGAGAACCGTTTCCACCATCTTCCTCTTGAGA  Raphanus sativus cv Early Scarlet Globe
EX750953       --> CTGCTAGTAGATTCTCCAAGAGAACCGTTCCCACCATCTTCCTCTTGAGA  Raphanus raphanistrum subsp. maritimus

               401    -    451
UN21828        --> CACAACAGGGATCTTCACAGATGAAGCTCTCTCCATTTCCTTCTCCAGCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY923636       <-- CACAACAGGGATCTTCACAGATGAAGCTCTCTCCATTTCCTTCTCCAGCT
EY901328       <-- CACAACAGGGATCTTCACAGATGAAGCTCTCTCCATTTCCTTCTCCAGCT
FD563330       <-- CACAACAGGGATCTTCACAGATGAAGCTCTCTCCATTTCCTTCTCCAGCT
FD542828       <-- CACAACAGGGATCTTCACAGATGAAGCTCTCTCCATTTCATTCTCCAGCT
FD556296       <-- ..................................................
FY431556       <-- ..................................................
FD551125       <-- ..................................................
FD569058       <-- ..................................................
EX746584       <-- ..................................................
EW717907       <-- ..................................................
EY919412       --> CACAACAGGGATCTTCACAGATGAAGCTCTCTCCATTTCCTTCTCCAGCT
FD566994       --> CACAACAGGGATCTTCACAGATGAAGCTCTCTCCATTTCCTTCTCCAGCT
EY896665       --> CACAACAGGGATCTTCACAGATGAAGCTCTCTCCATTTCCTTCTCCAGCT
FD538799       --> CACAACAGGGATCTTCACAGATGAAGCTCTCTCCATTTCATTCTCCAGCT
FD552628       --> CACAACAGGGATCTTCACAGATGAAGCTCTCTCCATTTCCTTCTCCAGCT
EW720843       --> CACAACAGGGATCTTCACAGATGAAGCTCTCTCCATTTCCTTCTCCAGCT
FD573327       --> CACAACAGGGATCTTCACAGATGAAGCTCTCTCCATTTCCTTCTCCAGCT
EX750953       --> CACAACAGGGATCTTCACAGATGAAGCTCTCTCCATTTCCTTCTCCAGCT

               451    -    501
UN21828        --> CTTCTTCAGACCTCAACGCGTTGAACTGTCCCTCCAGCGACTTAGCTGCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY923636       <-- CTTCTTCAGACCTCAACGCATTGAACTGTCCCTCCAGCGACTTAGCTGCA  Raphanus raphanistrum subsp. landra
EY901328       <-- CTTCTTCAGACCTCAACGCGTTGAACTGTCCCTCCAGCGACTTAGCTGCA  Raphanus raphanistrum subsp. maritimus
FD563330       <-- CTTCTTCAGACCTCAACGCGTTGAACTGTCCCTCCAGCGACTTAGCTGCA  Raphanus sativus var. oleiformis
FD542828       <-- CTTCTTCAGACCTCAACGCGTTGAACTGTCCCTCCAGCGACTTAGCTGCA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD556296       <-- ......CAGACCTCAACGCATTGAACTGTCCCTCCAGCGACTTAGCTGCA  Raphanus raphanistrum subsp. landra
FY431556       <-- ..................................................  Raphanus sativus cv GSK3-1
FD551125       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD569058       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EX746584       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EW717907       <-- ..................................................  Raphanus sativus var. oleiformis
EY919412       --> CTTCTTCAAACCTCAACGCATTGAACTGTCCCTCCAGCGACTTAGCTGCA  Raphanus raphanistrum subsp. landra
FD566994       --> CTTCTTCAAACCTCAACGCGTTGAACTGTCCCTCCAGCGACTTAGCTGCA  Raphanus sativus var. oleiformis
EY896665       --> CTTCTTCAGACCTCAACGCGTTGAACTGTCCCTCCAGCGACTTAGCTGCA  Raphanus raphanistrum subsp. maritimus
FD538799       --> CTTCTTCAGACCTCAACGCGTTGAACTGTCCCTCCAGCGACTTAGCTGCA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD552628       --> CTTCTTCAGACCTCAACGCATTGAACTGTCCCTCCAGCGACTTAGCTGCA  Raphanus raphanistrum subsp. landra
EW720843       --> CTTCTTCAGACCTCAACGCGTTGAACTGTCCCTCCAGCGACTTAGCTGCA  Raphanus sativus var. oleiformis
FD573327       --> CTTCTTCAGACCTCAACGCGTTGAACTGTCCCTCCAGCGACTTAGCTGCA  Raphanus sativus cv Early Scarlet Globe
EX750953       --> CTTCTTCAGACCTCAACGCGTTGAACTGTCCCTCCAGCGACTTAGCTGCA  Raphanus raphanistrum subsp. maritimus

               501    -    551
UN21828        --> GCTAACCACGCAGTGACAATGACCAACAGTATCATTCCTAGGTACGGTGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY923636       <-- GCTAACCACGCAGTGACAATGACCAACAGTATCATCCCTAGGTACGGTGT  Raphanus raphanistrum subsp. landra
EY901328       <-- GCTAACCACGCAGTGACAATGACCAACAGTATCATTCCTAGATACGGTGT  Raphanus raphanistrum subsp. maritimus
FD563330       <-- GCTAACCACGCAGTGACAATGACCAACAGTATCATCCCTAGGTACGGTGT  Raphanus sativus var. oleiformis
FD542828       <-- GCTAACCACGCAGTGACAATGACCAACAGTATCATTCCTAGGTACGGTGT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD556296       <-- GCTAACCACGCAGTGACAATGACCAACAGTATCATTCCTAGGTACGGTGT  Raphanus raphanistrum subsp. landra
FY431556       <-- ..................................................  Raphanus sativus cv GSK3-1
FD551125       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD569058       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EX746584       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EW717907       <-- ..................................................  Raphanus sativus var. oleiformis
EY919412       --> GCTAACCACGCAGTGACAATGACCAACAGTATCATCCCTAGGTACGGTGT  Raphanus raphanistrum subsp. landra
FD566994       --> GCTAACCACGCAGTGACAATGACCAACAGTATCATCCCTAGGTACGGTGT  Raphanus sativus var. oleiformis
EY896665       --> GCTAACCACGCAGTGACAATGACCAACAGTATCATTCCTAGATACGGTGT  Raphanus raphanistrum subsp. maritimus
FD538799       --> GCTAACCACGCAGTGACAATGACCAACAGTATCATTCCTAGGTACGGTGT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD552628       --> GCTAACCACGCAGTGACAATGACCAACAGTATCATTCCTAGGTACGGTGT  Raphanus raphanistrum subsp. landra
EW720843       --> GCTAACCACGCAGTGACAATGACCAACAGTATCATCCCTAGGTACGGTGT  Raphanus sativus var. oleiformis
FD573327       --> GCTAACCACGCAGTGACAATGACCAACAGTATCATCCCTAGGTACGGTGT  Raphanus sativus cv Early Scarlet Globe
EX750953       --> GCTAACCACGCAGTGACAATGACCAACAGTATCATTCCTAGATACGGTGT  Raphanus raphanistrum subsp. maritimus

               551    -    601
UN21828        --> TGAATTTGCTAGTGATCCAAATGATAAGATCATGAACTGTTGGATTAGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY923636       <-- TGAATTTGCCAGTGATCCAAATGATAAGATCATGAACTGCTGGATTAGAG  Raphanus raphanistrum subsp. landra
EY901328       <-- TGAATTTGCTAGTGATCCAAATGATAAGATCATGAACTGTTGGATTAGAG  Raphanus raphanistrum subsp. maritimus
FD563330       <-- TGAATTTGCCAGTGATCCAAATGATAAGATCATGAACTGCTGGATTAGAG  Raphanus sativus var. oleiformis
FD542828       <-- TGAATTTGCTAGTGATCCAAATGATAAGATCATGAACTGTTGGATTAGAG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD556296       <-- TGAATTTGCTAGTGATCCAAATGATAAGATCATGAACTGTTGGATTAGAG  Raphanus raphanistrum subsp. landra
FY431556       <-- ...ATTTGCTAGTGATCCAAATGATAAGATCATGAACTGCTGTATTAGAG  Raphanus sativus cv GSK3-1
FD551125       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD569058       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EX746584       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EW717907       <-- ..................................................  Raphanus sativus var. oleiformis
EY919412       --> TGAATTTGCCAGTGATCCAAATGATAAGATCATGAACTGCTGGATTAGAG  Raphanus raphanistrum subsp. landra
FD566994       --> TGAATTTGCCAGTGATCCAAATGATAAGATCATGAACTGCTGGATTAGAG  Raphanus sativus var. oleiformis
EY896665       --> TGAATTTGCTAGTGATCCAAATGATAAGATCATGAACTGTTGGATTAGAG  Raphanus raphanistrum subsp. maritimus
FD538799       --> TGAATTTGCTAGTGATCCAAATGATAAGATCATGAACTGTTGGATTAGAG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD552628       --> TGAATTTGCTAGTGATCCAAATGATAAGATCATGAACTGTTGGATTAGAG  Raphanus raphanistrum subsp. landra
EW720843       --> TGGATTTGCCAGTGATCCAAATGATAAGATCATGAACTGCTGGATTAGAG  Raphanus sativus var. oleiformis
FD573327       --> TGAATTTGCCAGTGATCCAAATGATAAGATCATGAACTGCTGGATTAGAG  Raphanus sativus cv Early Scarlet Globe
EX750953       --> TGAATTTGCTAGTGATCCAAATGATAAGATCATGAACTGTTGGATTAGAG  Raphanus raphanistrum subsp. maritimus

               601    -    651
UN21828        --> CACCCCCTGATTTCCCCAACGGGTTGCAAACCACATCAATTGCTGCTTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY923636       <-- CACCCCCTGATTTCCCCAACGGGTTGCAAACCACATCAATTGCTGCTTTC
EY901328       <-- CACCCCCTGATTTCCCCAACGGGTTGCAAACCACATCAATTGCTGCTTTC
FD563330       <-- CACCCCCTGATTTCCCCAACGGGTTGCAAACCACATCAATTGCTGCTTTC
FD542828       <-- CACCCCCTGATTTCCCCAACGGGTTGCAAACCACATCAATTGCAGCTTTC
FD556296       <-- CACCCCCTGATTTCCCCAACGGGTTGCAAACCACATCAATTGCTGCTTTC
FY431556       <-- CACCCCCTGATTTCCCCAAGGGGTTGCAAACCACATCAATTGCTGCTTTC
FD551125       <-- ..................................................
FD569058       <-- ..................................................
EX746584       <-- ..................................................
EW717907       <-- ..................................................
EY919412       --> CACCCCCTGATTTCCCCAACGGGTTGCAAACCACATCAATTGCTGCTTTC
FD566994       --> CACCCCCTGATTTCCCCAACGGGTTGCAAACCACATCAATTGCTGCTTTC
EY896665       --> CACCCCCTGATTTCCCCAACGGGTTGCAAACCACATCAATTGCTGCTTTC
FD538799       --> CACCCCCTGATTTCCCCAACGGGTTGCAAACCACATCAATTGCAGCTTTC
FD552628       --> CACCCCCTGATTTCCCCAACGGGTTGCAAACCACATCAATTGCTGCTTTC
EW720843       --> CACCCCCTGATTTCCCCAACGGGTTGCAAACCACATCAATTGCTGCTTTC
FD573327       --> CACCCCCTGATTTCCCCAACGGGTTGCAAACCACATCAATTGCTGCTTTC
EX750953       --> CACCCCCTGATTTCCCCAACGGGTTGCAAACCACATCAATTGCTGCTTTC

               651    -    701
UN21828        --> CCTTTAACCTTGGTATCCTCATCCAAGGGGATGTAAGCCATTTCTTTACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY923636       <-- CCTTTAACCTTGGTATCCTCATCCAAGGGGATGTAAGCCATTTCTTTACA
EY901328       <-- CCTTTAACCTTGGTATCCTCATCCAGGGGGATGTAAGCCATTTCTTTACA
FD563330       <-- CCTTTAACCTTGGTATCCTCATCCAAGGGGATGTAAGCCATTTCTTTACA
FD542828       <-- CCTTTAACCTTGGTATCCTCATCCAAGGGGATGTAAGCCATTTCTTTACA
FD556296       <-- CCTTTAACCTTGGTATCCTCGTCCAAGGGGATGTAAGCCATTTCTTTACA
FY431556       <-- CCTTTAACCTTGGTATCCTCATCCAAGGGGATGTAAGCCATTTCTTTACA
FD551125       <-- ..................................................
FD569058       <-- ..................................................
EX746584       <-- ..................................................
EW717907       <-- ..................................................
EY919412       --> CCTTTAACCTTGGTATCCTCATCCAAGGGGATGTAAGCCATTTCTTTA..
FD566994       --> CCTTTAACCTTGGTATCCTCATCCAAGGGGATGTAAGCCATTTCTTTACA
EY896665       --> CCTTTAACCTTGGTATCCTCATCCAGGGGGATGTAAGCCATTTCTTTACA
FD538799       --> CCTTTAACCTTGGTATCCTCATCCAAGGGGATGTAAGCCATTTCTT....
FD552628       --> CCTTTAACCTTGGTATCCTCGTCCAAGGGGATGTAAGCCATTTCTTTACA
EW720843       --> CCTTTAACCTTGGTATCCTCATCCAAGGGGATGTAAGCCATTTCTT....
FD573327       --> CCTTTAACCTTGGTATCCTCATCCAAGGGGATGTAAGCCATTTCTTTACA
EX750953       --> CCTTTAACCTTGGTATCCTCATCCAAGGGGATGTAAGCCATTTCTTTACA

               701    -    751
UN21828        --> AGGATCAAACAAGCTGTACTTGGCACTCTTGCTGAAGATATTCTGGAGGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY923636       <-- AGGATCAAACAAGCTGTACTTGGCACTCTTGCTGAAGATATTCTGGAGGG
EY901328       <-- AGGATCAAACAAGCTGTACTTGGCACTCTTGCTGAAGATATTCTGGAGGG
FD563330       <-- AGGATCAAACAAGCTGTACTTGGCACTCTTGCTGAAGATATTCTGGAGGG
FD542828       <-- AGGATCAAACAAGCTGTACTTGGCACTCTTGCTGAAGATATTCTGGAGGG
FD556296       <-- AGGATCAAACAAGCTGTACTTGGCACTCTTGCTGAAGATATTCTGGAGGG
FY431556       <-- AGGATCAAACAAGCTGTACTTGGCACTCTTGCTGAAGATATTCTGGAGGG
FD551125       <-- ..............TGTACT-GGCACTCT-GCTGAAGATAT-CTGGAGGG
FD569058       <-- ..............................................AGGG
EX746584       <-- ..................................................
EW717907       <-- ..................................................
EY919412       --> ..................................................
FD566994       --> AGGATCAAACAAGCTGTACTTGGCACTCTTGCTGAAGATATTCTGGAGGG
EY896665       --> AGGATCAAACAAGCTGTACTTGGCACTCTTGCTGAAGATATTCTGGAGGG
FD538799       --> ..................................................
FD552628       --> AGGATCAAACAAGCTGTACTTGGCACTCTTGCTGAAGATATTCTGGAGGG
EW720843       --> ..................................................
FD573327       --> AGGATCAAACAAGCTGTACTTGGCACTCTTGCTGAAGATATTCTGGAGGG
EX750953       --> AGGATCAAACAAGCTGTACTTGGCACTCTTGCTGAAGATATTCTGGAGGG

               751    -    801
UN21828        --> CACCAACATAGACAGCTGCGAGTAACGGAGTCATACCAAGCTTGGCAACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY923636       <-- CACCAACATAGACAGCTGCGAGTAACGGAGTCATACCAAGCTTGGCAACA
EY901328       <-- CACCAACATAGACAGCTGCGAGTAACGGAGTCATACCAAGCTTGGCAACA
FD563330       <-- CACCAACATAGACAGCTGCGAGTAACGGAGTCATACCAAGCTTGGCAACA
FD542828       <-- CACCAACATAGACAGCTGCGAGTAACGGAGTCATACCAAGCTTGGCAACA
FD556296       <-- CACCAACATAGACGGCTGCGAGTAACGGAGTCATACCAAGCTTGGCAACA
FY431556       <-- CACCAACATAGACAGCTGCGAGTAACGGAGTCATACCAAGCTTGGCAACA
FD551125       <-- CACCAACATAGACAGCTGCGAGTAACGGAGTCATACCAAGCTTGGCAACA
FD569058       <-- CACCAACATAGACAGCTGCGAGTAACGGAGTCATACCAAGCTTGGCAACA
EX746584       <-- ........TAGACAGCTGCGAGTAACGGAGTCATACCAAGCTTGGCAACA
EW717907       <-- ..................................................
EY919412       --> ..................................................
FD566994       --> CACCAACATAGACAGCTG................................
EY896665       --> CACCAACATAGACAGCTGCGAGTAACGGAGTCATACCAAGCTTGGCAACA
FD538799       --> ..................................................
FD552628       --> CACCAACATA........................................
EW720843       --> ..................................................
FD573327       --> CACCAACATAGACAGCTGCGAGTAACGGAGTCATACCAAGCTTGGCAACA
EX750953       --> CACCAACATAGACAGCTGCGAGTAACGGAGTCATACCAAGCTTGGCAACA

               801    -    851
UN21828        --> AGCGGTGCGAATGGGCCGCCAAACAATATCAGAGAGAAGAAGGCAAC-GC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY923636       <-- AGCGGc............................................  Raphanus raphanistrum subsp. landra
EY901328       <-- AGCGGTGCGAATGGGCCGCCAAACAGTATCc...................  Raphanus raphanistrum subsp. maritimus
FD563330       <-- AGCAGTGCGAATGGGCCGCCAAACAATATCAGAGAGAAGAAGGCAAC-GC  Raphanus sativus var. oleiformis
FD542828       <-- AGCGGTGCGAATGGGCCACCAAACAATATCAGAGAGAAGAACGCAAC-AC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD556296       <-- AGCGGTGCGAATGGGCCGCCAAACAGTATCAGAGAGAAGAAGGCAAC-GC  Raphanus raphanistrum subsp. landra
FY431556       <-- AGCGGTGCGAATGGGCCACCAAACAATATCAGAGAGAAGAAGGCAAC-GC  Raphanus sativus cv GSK3-1
FD551125       <-- AGCGGTGCGAATGGGCCACCAAACAATATCAGAGAGAAGAACGCAACACC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD569058       <-- AGCGGTGCGAATGGGCCGCCAAACAATATCAGAGAGAGGAAGGCAAC-GC  Raphanus sativus cv Early Scarlet Globe
EX746584       <-- AGCGGTGCGAATGG-CCGCCAAACAGTATCAGAGAGAAGAAGGCAAC-GC  Raphanus raphanistrum subsp. maritimus
EW717907       <-- ..................................................  Raphanus sativus var. oleiformis
EY919412       --> ..................................................  Raphanus raphanistrum subsp. landra
FD566994       --> ..................................................  Raphanus sativus var. oleiformis
EY896665       --> AGCGGTGCGAATGGGCCGCCAAACAGTATCc...................  Raphanus raphanistrum subsp. maritimus
FD538799       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD552628       --> ..................................................  Raphanus raphanistrum subsp. landra
EW720843       --> ..................................................  Raphanus sativus var. oleiformis
FD573327       --> AGCGGTGCGAATGGGCCGCCAAACAATATCAGAGAGAGGAAGGCAAC-GC  Raphanus sativus cv Early Scarlet Globe
EX750953       --> AGCGGTGCGAATGGGCCGCCAAACAGTATCAGAGAGAAGAAGGCAAC-GC  Raphanus raphanistrum subsp. maritimus

               851    -    901
UN21828        --> CAGTCAATAACAGAACAGTTGGGGTGATCTTTGCAGCTACTCCCCAGCCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY923636       <-- ..................................................
EY901328       <-- ..................................................
FD563330       <-- CAGTCAATAACAGAACAGTTGGGGTGATCTTTGCAGCTACTCCCCAGCCA
FD542828       <-- CAGTCAATAACAGAACAGTTGGAGTGATCTTTGCAGCTACTCCCCAGCCA
FD556296       <-- CAGTCAATAACAGAACAGTTGGGGTGATCTTTGCAGCTACTCCCCAGCCA
FY431556       <-- CAGTCAATAACAGAACAGTTGGGGTGATCTTTGCAGCTACTCCCCATCCA
FD551125       <-- CAGTCAATAACAGAACAGTTGGAGTGATCTTTGCAGCTACTCCCCAGCCA
FD569058       <-- CAGTCAATAACAGAACAGTTGGGGTGATCTTTGCAGCTACTCCCCAGCCA
EX746584       <-- CAGTCAATAACAGAACAGTTGGGGTGATCTTTGCAGCTACTCCCCAGCCA
EW717907       <-- ..................................................
EY919412       --> ..................................................
FD566994       --> ..................................................
EY896665       --> ..................................................
FD538799       --> ..................................................
FD552628       --> ..................................................
EW720843       --> ..................................................
FD573327       --> CAGTCA-TAACAGAACAGTTGGGGTGATCTTTGCAGCTACTCCCCAGCCA
EX750953       --> CAG...............................................

               901    -    951
UN21828        --> TACTTATCGAATACGTATTGACTGAGAAGCATCATTGTGAATGTTGCAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY923636       <-- ..................................................
EY901328       <-- ..................................................
FD563330       <-- TACTTATCGAATACGTATTGACTGAGAAGCATCATTGTGAATGTTGCAAT
FD542828       <-- TACTTATCGAATACGTATTGACTGAGAAGCATCATTGTGAATGTTGCAAT
FD556296       <-- TACTTATCGAATACGTATTGACTGAGAAGCATCATTGTGAATGTTGCAAT
FY431556       <-- TACTTATCGAATACGTATTGACTGAGAAGCATCATTGTGAATGTTGCAAT
FD551125       <-- TACTTATCGAATACGTATTGACTGAGAAG-ATCATTGTGAATGTTGCAAT
FD569058       <-- TACTTATCGAATACGTATTGACTGAGAAGCATCATTGTGAATGTTGCAAT
EX746584       <-- TACTTATCGAATACGTATTGACTAAGAAGCATCATTGTGAATGTTGCGAT
EW717907       <-- ..................................................
EY919412       --> ..................................................
FD566994       --> ..................................................
EY896665       --> ..................................................
FD538799       --> ..................................................
FD552628       --> ..................................................
EW720843       --> ..................................................
FD573327       --> TACTTATCGAATACGTATTGACTGAGAAGCATCATTGTGA-TGTTGCA-T
EX750953       --> ..................................................

               951    -   1001
UN21828        --> ACCAGTGCATGTTGAGAAGTCACCCATAAACGCTGAGTACTCGTTTGGGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY923636       <-- ..................................................
EY901328       <-- ..................................................
FD563330       <-- ACCAGTGCATGTTGc...................................
FD542828       <-- AACAGTGCATGTTGAGAAGTCACCCATAAACGCTGAGTACTCGTTTGGGC
FD556296       <-- ACCAGTGCATGTTGAGAAGTCACCCATAAACGCCGAGTACTCGTTTGGGC
FY431556       <-- ACCAGTGCATGTTGAGAAGTCACCCATAAAGGCTGAGTACTCGTTTGGGC
FD551125       <-- ACCAGTGCATGTTGAGAAGTCACCCATAAACGCTGAGTACTCGTTTGGGC
FD569058       <-- ACCAGTGCATGTTGAGAAGTCACCCATAAACGCTGAGTACTCGTTTGGGC
EX746584       <-- ACCAGTGCATGTTGAGAAGTCACCCATAAACGCTGAGTACTCGTTTGGGC
EW717907       <-- ..................................................
EY919412       --> ..................................................
FD566994       --> ..................................................
EY896665       --> ..................................................
FD538799       --> ..................................................
FD552628       --> ..................................................
EW720843       --> ..................................................
FD573327       --> ACCAGTGCATGTTGAGAAGTCACCCATAAACGCTGAGTACTCttt.....
EX750953       --> ..................................................

               1001   -   1051
UN21828        --> TAGGGAACTGAGCTTTAAGCTTTGATTTCCATGTGACTTCCACAAGGTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY923636       <-- ..................................................
EY901328       <-- ..................................................
FD563330       <-- ..................................................
FD542828       <-- TAGGGAACTGAGCTTTAAGCTTTGATTTCCATGTGACTTCCACAAGGTTG
FD556296       <-- TAGGGAACTGAGCTTTAAGCTTTGATTTCCATGTGACTTCCACAAGGTTG
FY431556       <-- TAGGGAACTGAGCTTTAAGCTTTGATTTCCATGTGACTTCCACAAGGTTG
FD551125       <-- TAGGGAACTGAGCTTTAAGCTTTGATTTCCATGTAACTTCCACAAGGTTG
FD569058       <-- TAGGGAACTGAGCTTTAAGCTTTGATTTCCATGTGACTTCCACAAGGTTG
EX746584       <-- TAGGGAACTGAGCTTTAAGCTTTGATTTCCATGTGACTTCCACAAGGTTG
EW717907       <-- ..................................................
EY919412       --> ..................................................
FD566994       --> ..................................................
EY896665       --> ..................................................
FD538799       --> ..................................................
FD552628       --> ..................................................
EW720843       --> ..................................................
FD573327       --> ..................................................
EX750953       --> ..................................................

               1051   -   1101
UN21828        --> ATACTAATACCATACGCCACCACTAAAGTAGCAAGATCCCTAATGTATGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY923636       <-- ..................................................
EY901328       <-- ..................................................
FD563330       <-- ..................................................
FD542828       <-- ATACTAATACCATACGCCACCc............................
FD556296       <-- ATACTAATACCATACGCCACCACTAAAGTAGCAAGATCCCTAATGTATGG
FY431556       <-- ATGCTAATACCATACGCCACCACTAAGGTAGCAAGATCCCTAATGTATGG
FD551125       <-- ATACTAATACCATACGCCACCACTAAAGTAGCAAGATCCCTAATGTATGG
FD569058       <-- ATACTAATACCATACGCCACCACTAAGGTAGCAAGATCCCTAATGTATGG
EX746584       <-- ATACTAATACCATACGCCACCACTAAAGTAGCAAGATCCCTAATGTATGG
EW717907       <-- ...........................................TGTATG-
EY919412       --> ..................................................
FD566994       --> ..................................................
EY896665       --> ..................................................
FD538799       --> ..................................................
FD552628       --> ..................................................
EW720843       --> ..................................................
FD573327       --> ..................................................
EX750953       --> ..................................................

               1101   -   1151
UN21828        --> TGATGACACCAAGAACTTCAAGCTCTCCATCGTTCCCATCTTAGGTTTGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY923636       <-- ..................................................
EY901328       <-- ..................................................
FD563330       <-- ..................................................
FD542828       <-- ..................................................
FD556296       <-- TGATGACACCAAGAACTTCAAGCTCTCCATCGTTCCCATCTTAGGTTTGT
FY431556       <-- TGATGACACCAAGAACTTCAAGCTCTCCATCGTTCCCATCTTAGGTTTGT
FD551125       <-- TGATGACACCAAGAACTTCAAGCTCTCCATCGTTCCCATCTTAGGTTTGT
FD569058       <-- TGATGAGACCAAGAACTTCGAGCTCTCCATTGTTCCCATCTTAGGTTTGT
EX746584       <-- TGATGACACCAAGAACTTCAAGCTCTCCATCGTTCCCATCTTAGGTTTGT
EW717907       <-- TGATGAGACCAAGAACTTCAAGCTCTCCATTGTTCCCATCTTAGGTTTGT
EY919412       --> ..................................................
FD566994       --> ..................................................
EY896665       --> ..................................................
FD538799       --> ..................................................
FD552628       --> ..................................................
EW720843       --> ..................................................
FD573327       --> ..................................................
EX750953       --> ..................................................

               1151   -   1201
UN21828        --> TCTTCTTCTTCAGGCTACGAGTTGGAAGAGGAACGTATCTATTAACCCAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY923636       <-- ..................................................
EY901328       <-- ..................................................
FD563330       <-- ..................................................
FD542828       <-- ..................................................
FD556296       <-- TCTTCTTCTTCAGcc...................................
FY431556       <-- TCTTCTTCTTCAGGCTACGAGTTGGAAGAGGAACGTATCTATTAACCCAC
FD551125       <-- TCTTCTTCTTCAGGCTACGAGTTGGAAGAGGAACGTATCTATTAACCCAC
FD569058       <-- TCTTCTTCTTCAGGCTACGAGTTGGAAGAGGAACGTATCTATTAACCCAC
EX746584       <-- TCTTCTTCTTCAGGCTACGAGTTGGAAGAGGAACGTATCTATTAACCCAC
EW717907       <-- TCTTCTTCTTCAGGCTACGAGTTGGAAGAGGAACGTATCTATTAACCCAC
EY919412       --> ..................................................
FD566994       --> ..................................................
EY896665       --> ..................................................
FD538799       --> ..................................................
FD552628       --> ..................................................
EW720843       --> ..................................................
FD573327       --> ..................................................
EX750953       --> ..................................................

               1201   -   1251
UN21828        --> CAATAGAGGAAACAGATGGCAAGTCCCATTCCCACCACAATGCTCATCAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY923636       <-- ..................................................
EY901328       <-- ..................................................
FD563330       <-- ..................................................
FD542828       <-- ..................................................
FD556296       <-- ..................................................
FY431556       <-- CAATAGAGGAAACAGATGGCAAGTCCCATTCCCACCACAATGCTCATCAT
FD551125       <-- CAATAGAGGAAACAGATGGCAAGTCCCATTCCCACCACAATGCTCATCAT
FD569058       <-- CAATAGAGGAAACAGATGGCAAGTCCCATTCCCACCACAATGCTCATCAT
EX746584       <-- CAATAGAGGAAACAGATGGCAAGTCCCATTCCCACCACAATGCTCATCAT
EW717907       <-- CAATAGAGGAAACAGATGGCAAGTCCCATTCCCACCACAATGATCATCAT
EY919412       --> ..................................................
FD566994       --> ..................................................
EY896665       --> ..................................................
FD538799       --> ..................................................
FD552628       --> ..................................................
EW720843       --> ..................................................
FD573327       --> ..................................................
EX750953       --> ..................................................

               1251   -   1301
UN21828        --> GGCTTTCAATGAAACTGCCCAGCCATCAACCCCAGGACCAAGATTCTTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY923636       <-- ..................................................
EY901328       <-- ..................................................
FD563330       <-- ..................................................
FD542828       <-- ..................................................
FD556296       <-- ..................................................
FY431556       <-- GGCTTTCAGTGAAACTGCCCAGCCATCAACTCCAGGACCAAGATTCTTTC
FD551125       <-- GGCTTTCAATGAAACTGCCCAGCCATCAACCCCAGGACCAAGATTCTTTC
FD569058       <-- GGCTTTCAATGAAACTGCCCAGCCATCAACCCCAGGACCAAGATTCTTTC
EX746584       <-- GGCTTTCAATGAAACCGCCCAGCCATCAACCCCAGGACCAAGATTCTTTC
EW717907       <-- GGCTTTCAATGAAACTGCCCAGCCATCAACCCCAGGACCAAGATTCTTTC
EY919412       --> ..................................................
FD566994       --> ..................................................
EY896665       --> ..................................................
FD538799       --> ..................................................
FD552628       --> ..................................................
EW720843       --> ..................................................
FD573327       --> ..................................................
EX750953       --> ..................................................

               1301   -   1351
UN21828        --> TCAAGTTGGAGAAGTACTTCACCGTTCTTCCAGAGAAGATCAGCGCAACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY923636       <-- ..................................................
EY901328       <-- ..................................................
FD563330       <-- ..................................................
FD542828       <-- ..................................................
FD556296       <-- ..................................................
FY431556       <-- TCAAATTAGAAAAGTACTTCACCGTTCTTCCAGAGAAGATCAGCGCAACA
FD551125       <-- TCAAGTTGGAGAAGTACTTCACCGTTCTTCCAGAGAAGATCAGCGCAACA
FD569058       <-- TCAAGTTGGAGAAGTAC--TACCGTTCTTCCAGAGAAGATTAGCGCAACA
EX746584       <-- TCAAGTTTGAAAAGTACTTCACCGTTCTTCCAGAGAAGATCAGCGCAACA
EW717907       <-- TCAAGTTGGAGAAGTACTTCACCGTTCTTCCAGAGAAGATTAGCGCAACA
EY919412       --> ..................................................
FD566994       --> ..................................................
EY896665       --> ..................................................
FD538799       --> ..................................................
FD552628       --> ..................................................
EW720843       --> ..................................................
FD573327       --> ..................................................
EX750953       --> ..................................................

               1351   -   1401
UN21828        --> TTGGCTCCAAGTCCAAACAAGGGATAGAACTTCTTGGCTTCATCCACGGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY923636       <-- ..................................................
EY901328       <-- ..................................................
FD563330       <-- ..................................................
FD542828       <-- ..................................................
FD556296       <-- ..................................................
FY431556       <-- TTGGCTCCAAGTCCAAACAAGGGATAGAACTTCT-GGCTTCATCCACGGT
FD551125       <-- TTGGCTCCAAGTCCAAACAAGGGATAGAACTTCTTGGCTTCGTCCACGGT
FD569058       <-- TTGGCTCCAAGTCCAAACAAGGGATAGAACTTCTTGGCTTCATCCACGGT
EX746584       <-- TTTGCTCCAAGTCCAAACAAGGGATAAAACTTCTTGGCTTCATCCACAGT
EW717907       <-- TTGGCTCCAAGTCCAAACAAGGGATAGAACTTCTTGGCTTCATCCACGGT
EY919412       --> ..................................................
FD566994       --> ..................................................
EY896665       --> ..................................................
FD538799       --> ..................................................
FD552628       --> ..................................................
EW720843       --> ..................................................
FD573327       --> ..................................................
EX750953       --> ..................................................

               1401   -   1451
UN21828        --> TGTAATCTGATTAGCAAAGCCCCAGAAGAGAACTGAAATAACCACACTAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY923636       <-- ..................................................
EY901328       <-- ..................................................
FD563330       <-- ..................................................
FD542828       <-- ..................................................
FD556296       <-- ..................................................
FY431556       <-- TGTgat............................................
FD551125       <-- TGTGATCTGATTAGCAAAGCCCCAGAAGAGAACTGAAATAACCACACTAC
FD569058       <-- TGTAATCTGATTAGCAAAGCCCCAGAAGAGAACTGAAATAACCACACTAC
EX746584       <-- TGTAATCTGATTAGCAAAGCCCCAGAAGAGAACCGAAATAACAACACTAC
EW717907       <-- TGTAATCTGATTAGCAAAGCCCCAGAAGAGAACTGAAATAACCACACTAC
EY919412       --> ..................................................
FD566994       --> ..................................................
EY896665       --> ..................................................
FD538799       --> ..................................................
FD552628       --> ..................................................
EW720843       --> ..................................................
FD573327       --> ..................................................
EX750953       --> ..................................................

               1451   -   1501
UN21828        --> CCCAAAGCTCAGCCATGACATAAAACAAACAGAAGCTCCAAATCCTCAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY923636       <-- ..................................................
EY901328       <-- ..................................................
FD563330       <-- ..................................................
FD542828       <-- ..................................................
FD556296       <-- ..................................................
FY431556       <-- ..................................................
FD551125       <-- CCCAAAGCTCAG......................................
FD569058       <-- CCCc..............................................
EX746584       <-- CCC--AGCTCAGCCATGACATAAAACAAACAGAAACTCCAAATCCTCAAG
EW717907       <-- CCCAAAGCTCAGCCATGACATAAAACAAACAGAAGCTCCAAATCCTCAAG
EY919412       --> ..................................................
FD566994       --> ..................................................
EY896665       --> ..................................................
FD538799       --> ..................................................
FD552628       --> ..................................................
EW720843       --> ..................................................
FD573327       --> ..................................................
EX750953       --> ..................................................

               1501   -   1551
UN21828        --> ATAGCAAGAGGGCCCATGAACCTTGGACCAAGAGCTGCGAGAAGCTTATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY923636       <-- ..................................................
EY901328       <-- ..................................................
FD563330       <-- ..................................................
FD542828       <-- ..................................................
FD556296       <-- ..................................................
FY431556       <-- ..................................................
FD551125       <-- ..................................................
FD569058       <-- ..................................................
EX746584       <-- ATAGCAAGAGGGCCCATGAACCTTGGACCAAGAGCAGCAAGGAGCTTc..
EW717907       <-- ATAGCAAGAGGGCCCATGAACCTTGGACCAAGAGCTGCGAGAAGCTTATC
EY919412       --> ..................................................
FD566994       --> ..................................................
EY896665       --> ..................................................
FD538799       --> ..................................................
FD552628       --> ..................................................
EW720843       --> ..................................................
FD573327       --> ..................................................
EX750953       --> ..................................................

               1551   -   1601
UN21828        --> AGCAAGAGCCTCCGGGTGAATATAGTTGCTGAGAGGGTACATGACGAAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY923636       <-- ..................................................
EY901328       <-- ..................................................
FD563330       <-- ..................................................
FD542828       <-- ..................................................
FD556296       <-- ..................................................
FY431556       <-- ..................................................
FD551125       <-- ..................................................
FD569058       <-- ..................................................
EX746584       <-- ..................................................
EW717907       <-- AGCAAGAGCCTCCGGGTGAATATAGTTGCTGAGAGGGTACATGACGAAAC
EY919412       --> ..................................................
FD566994       --> ..................................................
EY896665       --> ..................................................
FD538799       --> ..................................................
FD552628       --> ..................................................
EW720843       --> ..................................................
FD573327       --> ..................................................
EX750953       --> ..................................................

               1601   -   1651
UN21828        --> CGAAGGCCCCAAAGTAGATGATGAAAGGGATGATAACGGTGTAGAACAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY923636       <-- ..................................................
EY901328       <-- ..................................................
FD563330       <-- ..................................................
FD542828       <-- ..................................................
FD556296       <-- ..................................................
FY431556       <-- ..................................................
FD551125       <-- ..................................................
FD569058       <-- ..................................................
EX746584       <-- ..................................................
EW717907       <-- CGAAGGCCCCAAAGTAGATGATGAAAGGGATGATAACGGTGTAGAACAGA
EY919412       --> ..................................................
FD566994       --> ..................................................
EY896665       --> ..................................................
FD538799       --> ..................................................
FD552628       --> ..................................................
EW720843       --> ..................................................
FD573327       --> ..................................................
EX750953       --> ..................................................

               1651   -   1701
UN21828        --> GCCTTCTTGGAGAGAACGTTGGAGAGTTTTGTGTAGAGGAGCATGAACCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY923636       <-- ..................................................
EY901328       <-- ..................................................
FD563330       <-- ..................................................
FD542828       <-- ..................................................
FD556296       <-- ..................................................
FY431556       <-- ..................................................
FD551125       <-- ..................................................
FD569058       <-- ..................................................
EX746584       <-- ..................................................
EW717907       <-- GCCTTCTTGGAGAGAACGTTGGAGAGTTTTGTGTAGAGGAGCATGAACCC
EY919412       --> ..................................................
FD566994       --> ..................................................
EY896665       --> ..................................................
FD538799       --> ..................................................
FD552628       --> ..................................................
EW720843       --> ..................................................
FD573327       --> ..................................................
EX750953       --> ..................................................

               1701   -   1751
UN21828        --> AATAGCCATAGGGGGGTTGACCCACGTCTTCAAAAAGGGTATAATCTCAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY923636       <-- ..................................................
EY901328       <-- ..................................................
FD563330       <-- ..................................................
FD542828       <-- ..................................................
FD556296       <-- ..................................................
FY431556       <-- ..................................................
FD551125       <-- ..................................................
FD569058       <-- ..................................................
EX746584       <-- ..................................................
EW717907       <-- AATAGCCATAGGGGGGTTGACCCACGTCTTCAAAAAGGGTATAATCTCAG
EY919412       --> ..................................................
FD566994       --> ..................................................
EY896665       --> ..................................................
FD538799       --> ..................................................
FD552628       --> ..................................................
EW720843       --> ..................................................
FD573327       --> ..................................................
EX750953       --> ..................................................

               1751   -   1801
UN21828        --> CCGAGCTCCCTTTGGCCGTCACCACCAAGACGTCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY923636       <-- ...................................
EY901328       <-- ...................................
FD563330       <-- ...................................
FD542828       <-- ...................................
FD556296       <-- ...................................
FY431556       <-- ...................................
FD551125       <-- ...................................
FD569058       <-- ...................................
EX746584       <-- ...................................
EW717907       <-- CCGAGCTCCCTTTGGCCGTCACCACCAAGACGTCC
EY919412       --> ...................................
FD566994       --> ...................................
EY896665       --> ...................................
FD538799       --> ...................................
FD552628       --> ...................................
EW720843       --> ...................................
FD573327       --> ...................................
EX750953       --> ...................................