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Alignment for radish unigene UN21843

               1      -     51
UN21843        --> GGAGAGAGGAGACATAGATAAATCTTAACAATCACAAAAGTCAATATATT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY914269       <-- GGAGAGAGGAGACATAGATAAATCTTAACAATCACAAAAGTCAATATTTT
EY931997       <-- ...................AAATCTTAACAATCACAAAAGTCAATATATT
FD970636       <-- ..........................AACAATCACAAAAGTCAATATATT
FD978788       <-- ..........................AACAATCACAAAAGTCAATA--TT
FD541613       <-- .............................AATCACAAAAGTCAATATATT
EV536265       <-- ................................CACAAAAGTCAATATATT
EY899545       <-- ................................................TT
EV547984       <-- ..................................................
EW717158       <-- ..................................................
EV539632       <-- ..................................................
EV547666       <-- ..................................................
EX757282       <-- ..................................................
EY908755       <-- ..................................................
EY921196       <-- ..................................................
EY946144       <-- ..................................................
FD974272       <-- ..................................................
EY937882       <-- ..................................................
FD947384       <-- ..................................................
FD534713       <-- ..................................................
EY905806       <-- ..................................................
EY910346       --> GGAGAGAGGAGACATAGATAAATCTTAACAATCACAAAAGTCAATATTTT
EY895289       --> .......................aaTAACAATCACAAAAGTCAATATATT
FD974964       --> ..........................AACAATCACAAAAGTCAATAT--T
EX892574       --> ..........................ggCAATCACAAAAGTCAATATATT
FD537854       --> .............................AATCACAAAAGTCAATATATT
EV540752       --> ................................CACAAAAGTCAATATATT
EV543750       --> ..................................................
EV543499       --> ..................................................
EX760906       --> ..................................................
EY902150       --> ..................................................
EY904404       --> ..................................................
FD966945       --> ..................................................
FD530566       --> ..................................................
FY430068       --> ..................................................

               51     -    101
UN21843        --> TTTTT--GTTTTCTTAAGTTACAAATTGAAA-CATATTAGACAATCACAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY914269       <-- TTTTT--GTTTTCTTAAGTTACAAATTGAAA-CATATTAGACAATCACAC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY931997       <-- TTTTTTTGTTTTCTTAAGTTACAAATGAAAA-CATATTAGACAATCACAC  Raphanus sativus var. oleiformis
FD970636       <-- TTTTTTTGTTTTCTTAAGTTACAAATTGAAA-CATATTAGACAATCACAC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD978788       <-- TTTTT--GTTTTCTTAAGTTACAAATTGAAA-CATATTAGACAATCACAC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD541613       <-- TTTTT-TGTTTTCTTAAGTTACAAATTGAAA-CATATTAGACAATCACAC  Raphanus raphanistrum subsp. raphanistrum (MS)
EV536265       <-- TTTTT-TGTTTTCTTAAGTTACAAATTGAAA-CATATTAGACAATCACAC  Raphanus raphanistrum subsp. raphanistrum (MS)
EY899545       <-- TTTTT--GTTTTCTTAAGTTACAA--AGAAAGCATATTAGACAATCACAC  Raphanus raphanistrum subsp. maritimus
EV547984       <-- .......GTTTTCTTAAGTTACAAATTGAAA-CATATTAGACAATCACAC  Raphanus raphanistrum subsp. raphanistrum (NY)
EW717158       <-- .......GTTTTCTTAAGTTACAAATGAAAA-CATATTAGACAATCACAC  Raphanus sativus var. oleiformis
EV539632       <-- ...............AAGTTACAAATTGAAA-CATATTAGACAATCACAC  Raphanus raphanistrum subsp. raphanistrum (MS)
EV547666       <-- ...............AAGTTACAAATTGAAA-CATATTAGACAATCACAC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX757282       <-- ...............AAGTTACAAATTGAAA-CATATTAGACAATCACAC  Raphanus raphanistrum subsp. raphanistrum (MS)
EY908755       <-- ...............AAGTTACAAATTGAAA-CATATTAGACAATCACAC  Raphanus raphanistrum subsp. raphanistrum (MS)
EY921196       <-- ...............AAGTTACAAATGAAAA-CATATTAGACCATCACAC  Raphanus raphanistrum subsp. landra
EY946144       <-- ...............AAGTTACAAATGAAAA-CATATTAGACAATCACAC  Raphanus sativus cv Rat-Tail Radish #3870
FD974272       <-- ...............AAGTTACAAATTGAAA-CATATTAGACAATCACAC  Raphanus raphanistrum subsp. raphanistrum (MS)
EY937882       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD947384       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD534713       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EY905806       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY910346       --> TTTTT--GTTTTCTTAAGTTACAAATTGAAA-CATATTAGACAATCACAC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY895289       --> TTTTT--GTTTTCTTAAGTTACAAATGAAAG-CATATTAGACAATCACAC  Raphanus raphanistrum subsp. maritimus
FD974964       --> TTTTT--GTTTTCTTAAGTTACAAATTGAAA-CATATTAGACAATCACAC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX892574       --> TTTTTTTGTTTTCTTAAGTTACAAATGAAAA-CATATTAAACAATCACAC  Raphanus sativus var. oleiformis
FD537854       --> TTTTT-TGTTTTCTTAAGTTACAAATTGAAA-CATATTAAACAATCACAC  Raphanus raphanistrum subsp. raphanistrum (MS)
EV540752       --> TTTTT-TGTTTTCTTAAGTTACAAATTGAAA-CATATTAAACAATCACAC  Raphanus raphanistrum subsp. raphanistrum (MS)
EV543750       --> .......GTTTTCTTAAGTTACAAATTGAAA-CATATTAGACAATCACAC  Raphanus raphanistrum subsp. raphanistrum (NY)
EV543499       --> ...............AAGTTACAAATTGAAA-CATATTAAACAATCACAC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX760906       --> ...............AAGTTACAAATTGAAA-CATATTAGACAATCACAC  Raphanus raphanistrum subsp. raphanistrum (MS)
EY902150       --> ...............AAGTTACAAATTGAAA-CATATTAGACAATCACAC  Raphanus raphanistrum subsp. raphanistrum (MS)
EY904404       --> ...............AAGTTACAAATTGAAA-CATATTAGACAATCACAC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD966945       --> ...............AAGTTACAAATTGAAA-CATATTAGACAATCACAC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD530566       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FY430068       --> ..................................................  Raphanus sativus cv GSK3-1

               101    -    151
UN21843        --> AATCAA-CACATAGAAGCAGGAAAAAGTTAAGGTTAAGAGAGTTATTACG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY914269       <-- AATCAA-CACATAGAAGCAGGAAAAAGTTAAGGTTAAGAGAGTTATTACG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY931997       <-- AATCAA-CACATAGAAGCAGGAAAAAGTCAAGGTTAAGAGAGTTATTACG  Raphanus sativus var. oleiformis
FD970636       <-- AATCAA-CACATAGAAGCAGGAAAAAGTTAGGGTTAAGAGAGTTATTACG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD978788       <-- AATCAA-CACATAGAAGCAGGAAAAAGTTAAGGTTAAGAGAGTTATTACG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD541613       <-- AATCAA-CACATAGAAGCAGGAAAAAGTTAGGGTTAAGAGAGTTATTACG  Raphanus raphanistrum subsp. raphanistrum (MS)
EV536265       <-- AATCAA-CACATAGAAGCAGGAAAAAGTTAGGGTTAAGAGAGTTATTACG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY899545       <-- AATCAAACACATAGAAGCAGGAAAAAGTTAAGGTTAAGAGAGTTATTACG  Raphanus raphanistrum subsp. maritimus
EV547984       <-- AATCAA-CACATAGAAGCAGGAAAAAGTTAAGGTTAAGAGAGTTATTACG  Raphanus raphanistrum subsp. raphanistrum (NY)
EW717158       <-- AATCAA-CACATAGAAACAGGAAAAAGTCAAGGTTAAGAGAGTTATTACG  Raphanus sativus var. oleiformis
EV539632       <-- AATCAA-CACATAGAAGCAGGAAAAAGTTAGGGTTAAGAGAGTTATTACG  Raphanus raphanistrum subsp. raphanistrum (MS)
EV547666       <-- AATCAA-CACATAGAAGCCGGAAAAAGTTAAGGTTAAGAGAGTTATTACG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX757282       <-- AATCAA-CACATAGAAGCAGGAAAAAGTTAGGGTTAAGAGAGTTATTACG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY908755       <-- AATCAA-CACATAGAAGCAGGAAAAAGTTAGGGTTAAGAGAGTTATTACG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY921196       <-- AATCAA-CACATAGAAGCAGGAAAAAGTTAAGGTTAAGAGAGTTATTACG  Raphanus raphanistrum subsp. landra
EY946144       <-- AATCAA-CACATAGAAGCAGGAAAAAGTCAAGGTTAAGAGAGTTATTACG  Raphanus sativus cv Rat-Tail Radish #3870
FD974272       <-- AATCAA-CAAGAAGAAGCAGGAAAAAGTTAGGGTTAAGAGAGTTATTACG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY937882       <-- ..caAA-CACATAGAAGCAGGAAAAAGTTAAGGTTAAGAGAGTTATTACG  Raphanus sativus cv Early Scarlet Globe
FD947384       <-- ..............AAGCAGGAAAAAGTTAAGGTTAAGAGAGTTATTACG  Raphanus sativus cv Early Scarlet Globe
FD534713       <-- ...............................................ACG  Raphanus raphanistrum subsp. maritimus
EY905806       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY910346       --> AATCAA-CACATAGAAGCAGGAAAAAGTTAAGGTTAAGAAAGTTATTACG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY895289       --> AATCAAACACATAGAAGCAGGAAAAAGTTAAGGTTAAGAGAGTTATTACG  Raphanus raphanistrum subsp. maritimus
FD974964       --> AATCAA-CACATAGAAGCAGGAAAAAGTTAAGGTTAAGAGAGTTATTACG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX892574       --> AATCAA-CACATAGAAGCAGGAAAAAGTCAAGGTTAAGAGAGTTATTACG  Raphanus sativus var. oleiformis
FD537854       --> AATCAA-CACATAAAAGCAGGAAAAAGTTAGGGTTAAAAAAGTTATTACC  Raphanus raphanistrum subsp. raphanistrum (MS)
EV540752       --> AATCAA-CACATAAAAGCAGGAAAAAGTTAGGGTTAAGAGAGTTATTACG  Raphanus raphanistrum subsp. raphanistrum (MS)
EV543750       --> AATCAA-CACATAGAAGCAGGAAAAAGTTAAGGTTAAGAGAGTTATTACG  Raphanus raphanistrum subsp. raphanistrum (NY)
EV543499       --> AATCAA-CACATAAAAGCCGGAAAAAGTTAAGGTTAAAAGAGTTATTACG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX760906       --> AATCAA-CACATAGAAGCAGGAAAAAGTTAGGGTTAAGAGAGTTATTACG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY902150       --> AATCAA-CACATAGAAGCAGGAAAAAGTTAGGGTTAAGAGAGTTATTACG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY904404       --> AATCAA-CACATAGAAGCAGGAAAAAGTTAGGGTTAAGAGAGTTATTACG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD966945       --> AATCAA-CACATAGAAGCAGGAAAAAGTTAGGGTTAAGAGAGTTATTACG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD530566       --> ...............................................ACG  Raphanus raphanistrum subsp. maritimus
FY430068       --> ..................................................  Raphanus sativus cv GSK3-1

               151    -    201
UN21843        --> CAACATATTATGCCAAATATTTATTCAAACACACACACACATATCTCTTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY914269       <-- AAACATATTATGCCAAATATTTATTCAAACACACACACACATATCTCTTA
EY931997       <-- CAACATATTATGCCAAATATTTATTCAAACACACACACACATATCTCTTA
FD970636       <-- CAACATATTATGCCAAATATTTATTCAAACACACACACACATATCTCTTA
FD978788       <-- CAACATATTATGCCAAATATTTATTCAAACACACACAC--ATATCTCTTA
FD541613       <-- CAACATATTATGCCAAATATTTATTCAAACACACACACACATATCTCTTA
EV536265       <-- CAACATATTATGCCAAATATTTATTCAAACACACACACACATATCTCTTA
EY899545       <-- CAACATATTATGCCAAATATTTATTCAAACACACACACACATATCTCTTA
EV547984       <-- CAACATATTATGCCAAATATTTATTCAAACACACACACACATATCTCTTA
EW717158       <-- CAACATATTATGCCAAATATTTATTCAAACACACACACACATATCTCTTA
EV539632       <-- CAACATATTATGCCAAATATTTATTCAAACACACACACACATATCTCTTA
EV547666       <-- CAACATATTATGCCAAATATTTACTCAAACACACACACACATATCTCTTA
EX757282       <-- CAACATATTATGCCAAATATTTATTCAAACACACACACACATATCTCTTA
EY908755       <-- CAACATATTATGCCAAATATTTATTCAAACACACACACACATATCTCTTA
EY921196       <-- CAACATATTATGCCAAATATTTATTCAAACACACACACACATATCTCTTA
EY946144       <-- CAACATATTATGCCAAATATTTATTCAAACACACACACACATATCTCTTA
FD974272       <-- CAACATATTATGCCAAATATTTATTCAAACACACACACACATATCTCTTA
EY937882       <-- CAACATATTATGCCAAATATTTATTCAAACACACACAC--ATATCTCTTA
FD947384       <-- CAACATATTATGCCAAATATTTATTCAAACACACACACACATATCTCTTA
FD534713       <-- CAACATATTATGCCAAATATTTATTCAAACACACACACACATATCTCTTA
EY905806       <-- ..................................................
EY910346       --> AAACATATTATGCCAAATATTTATTCAAACACACACACACATATCTCTTA
EY895289       --> CAACATATTATGCCAAATATTTATTCAAACACACACACACATATCTCTTA
FD974964       --> CAACATATTATGCCAAATATTTATTCAAACACACACACA--TATCTCTTA
EX892574       --> CAACATATTATGCCAAATATTTATTCAAACACACACACACATATCTCTTA
FD537854       --> CAACATATTATGCCAAATATTTATTCAAACACACACACACATATCTCTTA
EV540752       --> CAACATATTATGCCAAATATTTATTCAAACACACACACACATATCTCTTA
EV543750       --> CAACATATTATGCCAAATATTTATTCAAACACACACACACATATCTCTTA
EV543499       --> CAACATATTATGCCAAATATTTACTCAAACACACACACACATATCTCTTA
EX760906       --> CAACATATTATGCCAAATATTTATTCAAACACACACACACATATCTCTTA
EY902150       --> CAACATATTATGCCAAATATTTATTCAAACACACACACACATATCTCTTA
EY904404       --> CAACATATTATGCCAAATATTTATTCAAACACACACACACATATCTCTTA
FD966945       --> CAACATATTATGCCAAATATTTATTCAAACACACACACACATATCTCTTA
FD530566       --> CAACATATTATGCCAAATATTTATTCAAACACACACACACATATCTCTTA
FY430068       --> ............gccAATATTTATTCAA-CACACACACACATATCTCTTA

               201    -    251
UN21843        --> ACATCAAACACATTTTT-CCCC-CCGGTTTTCCTGCATACATGTGATTTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY914269       <-- ACATCAAACACATTTTT-CCCT-CCGGTTTTCCTGCATACATGTGATTTA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY931997       <-- ACATCAAACACATTTTT-TCCCACCGATTTTCCTGCGTACATGTGATTTA  Raphanus sativus var. oleiformis
FD970636       <-- ACATCAAACACATTTTT-CCCC-CCGGTTTTCCTGCATACATGTGATTTA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD978788       <-- ACATCAAACACATTTTT-CCCT-CCGGTTTTCCTGCATACATGTGATTTA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD541613       <-- ACATCAAACACATTTTT-CCCC-CCGGTTTTCCTGCATACATGTGATTTA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV536265       <-- ACATCAAACACATTTTT-CCCC-CCGGTTTTCCTGCATACATGTGATTTA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY899545       <-- ACATCAAACACATTTTTTTCCG-CCGGTTTTCCTGCATACATGTGATTTA  Raphanus raphanistrum subsp. maritimus
EV547984       <-- ACATCAAACACATTTTT-CCCT-CCGGTTTTCCTGCATACATGTGATTTA  Raphanus raphanistrum subsp. raphanistrum (NY)
EW717158       <-- ACATCAAACACATTTTT-TCCCACCGATTTTCCTGCGTACATGTGATTTA  Raphanus sativus var. oleiformis
EV539632       <-- ACATCAAACACATTTTT-CCCC-CCGGTTTTCCTGCATACATGTGATTTA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV547666       <-- ACATCAAACACATTTTT-CCCT-CCGGTTTTCCTGCATACATGTGATTTA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX757282       <-- ACATCAAACACATTTTT-CCCC-CCGGTTTTCCTGCATACATGTGATTTA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY908755       <-- ACATCAAGCACATTTTT-CCCC-CCGGTTTTCCTGCATACATGTGATTTA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY921196       <-- ACATCAAACACATTTTTTTCCA-CCGGTTTTCCTGCATACATGTGATTTA  Raphanus raphanistrum subsp. landra
EY946144       <-- ACATCAAACACATTTTT-TCCCACCGATTTTCCTGCGTACATGTGATTTA  Raphanus sativus cv Rat-Tail Radish #3870
FD974272       <-- ACATCAAACACATTTTT-CCCC-CCGGTTTTCCTGCATACATGTGATTTA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY937882       <-- ACATCAAATACATTTTT-TCCCACCGGTTTTCCTGCATACATGTGATTTA  Raphanus sativus cv Early Scarlet Globe
FD947384       <-- ACATCAAATACATTTTT-TCCCACCGGTTTTCCTGCATACATGTGATTTA  Raphanus sativus cv Early Scarlet Globe
FD534713       <-- ACATCAAATACATTTTT-TCCCACCGGTTTTCCTGCATACATGTGATTTA  Raphanus raphanistrum subsp. maritimus
EY905806       <-- ............TTTTT-CCCC-CCGGTTTTCCTGCATACATGTGATTTA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY910346       --> ACATCAAACACATTTTT-CCCT-CCGGTTTTCCTGCATACATGTGATTTA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY895289       --> ACATCAAACACATTTTTTTCCG-CCGGTTTTCCTGCATACATGTGATTTA  Raphanus raphanistrum subsp. maritimus
FD974964       --> ACATCAAACACATTTTT-CCCT-CCGGTTTTCCTGCATACATGTGATTTA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX892574       --> ACATCAAACACATTTTT-TCCCACCGATTTTCCTGCGTACATGTGATTTA  Raphanus sativus var. oleiformis
FD537854       --> ACATCAAACACATTTTT-CCCC-CCGGTTTTCCTGCATACATGTGATTTA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV540752       --> ACATCAAACACATTTTT-CCCC-CCGGTTTTCCTGCATACATGTGATTTA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV543750       --> ACATCAAACACATTTTT-CCCT-CCGGTTTTCCTGCATACATGTGATTTA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV543499       --> ACATCAAACACATTTTT-CCCT-CCGGTTTTCCTGCATACATGTGATTTA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX760906       --> ACATCAAACACATTTTT-CCCC-CCGGTTTTCCTGCATACATGTGATTTA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY902150       --> ACATCAAACACATTTTT-CCCC-CCGGTTTTCCTGCATACATGTGATTTA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY904404       --> ACATCAAGCACATTTTT-CCCC-CCGGTTTTCCTGCATACATGTGATTTA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD966945       --> ACATCAAACACATTTTT-CCCC-CCGGTTTTCCTGCATACATGTGATTTA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD530566       --> ACATCAAATACATTTTT-TCCCACCGGTTTTCCTGCATACATGTGATTTA  Raphanus raphanistrum subsp. maritimus
FY430068       --> ACATCAAACACATTTTT-TCCCACCGATTTTCCTGCGTACATGTGATTTA  Raphanus sativus cv GSK3-1

               251    -    301
UN21843        --> CACCATAATTAACAGCTGCAGCTGTCCCCACAGCTACAGTTTGATCCGCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY914269       <-- CACCATAATTAACAGCTGCAGCTGTCCCCACAGCTACAGTTTGATCCGCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY931997       <-- CATCACAATTAACAGCTGCAGCTGTCCCCACAGCTACAGTTTGATCCGCA  Raphanus sativus var. oleiformis
FD970636       <-- CACCATAATTAACAGCTGCAGCTGTCCCCACAGCTACAGTTTGATCCGCA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD978788       <-- CACCATAATTAACAGCTGCAGCTGTCCCCACAGCTACAGTTTGATCCGCA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD541613       <-- CACCATAATTAACAGCTGCAGCTGTCCCCACAGCTACAGTTTGATCCGCA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV536265       <-- CACCATAATTAACAGCTGCAGCTGTCCCCACAGCTACAGTTTGATCCGCA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY899545       <-- CACCACAATTAACAGCTGCAGCTGTCCCCACAGCTACAGTTTGATCCGCA  Raphanus raphanistrum subsp. maritimus
EV547984       <-- CACCATAATTAACAGCTGCAGCTGTCCCCACAGCTACAGTTTGATCCGCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EW717158       <-- CATCACAATTAACAGCTGCAGCTGTCCCCACAGCTACAGTTTGATCCGCA  Raphanus sativus var. oleiformis
EV539632       <-- CACCATAATTAACAGCTGCAGCTGTCCCCACAGCTACAGTTTGATCCGCA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV547666       <-- CACCATAATTAACAGCTGCAGCTGTCCCCACAGCTACAGTTTGATCCGCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX757282       <-- CACCATAATTAACAGCTGCAGCTGTCCCCACAGCTACAGTTTGATCCGCA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY908755       <-- CACCATAATTAACAGCTGCAGCTGTCCCCACAGCTACAGTTTGATCCGCA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY921196       <-- CACCACAATTAACAGCTGCAGCTGTCCCCACAGCTACAGTTTGATCCGCA  Raphanus raphanistrum subsp. landra
EY946144       <-- CATCACAATTAACAGCTGCAGCTGTCCCCACAGCTACAGTTTGATCCGCA  Raphanus sativus cv Rat-Tail Radish #3870
FD974272       <-- CACCATAATTAACAGCTGCAGCTGTCCCCACAGCTACAGTTTGATCCGCA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY937882       <-- CACCACAATTAACAGCTGCAGCTGTCCCCACAGCTACAGTTTGATCCGCA  Raphanus sativus cv Early Scarlet Globe
FD947384       <-- CACCACAATTAACAGCTGCAGCTGTCCCCACAGCTACAGTTTGATCCGCA  Raphanus sativus cv Early Scarlet Globe
FD534713       <-- CACCACAATTAACAGCTGCAGCTGTCCCCACAGCTACAGTTTGATCCGCA  Raphanus raphanistrum subsp. maritimus
EY905806       <-- CACCATAATTAACAGCTGCAGCTGTCCCCACAGCTACAGTTTGATCCGCA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY910346       --> CACCATAATTAACAGCTGCAGCTGTCCCCACAGCTACAGTTTGATCCGCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY895289       --> CACCACAATTAACAGCTGCAGCTGTCCCCACAGCTACAGTTTGATCCGCA  Raphanus raphanistrum subsp. maritimus
FD974964       --> CACCATAATTAACAGCTGCAGCTGTCCCCACAGCTACAGTTTGATCCGCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX892574       --> CATCACAATTAACAGCTGCAGCTGTCCCCACAGCTACAGTTTGATCCGCA  Raphanus sativus var. oleiformis
FD537854       --> CACCATAATTAACAGCTGCAGCTGTCCCCACAGCTACAGTTTGATCCGCA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV540752       --> CACCATAATTAACAGCTGCAGCTGTCCCCACAGCTACAGTTTGATCCGCA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV543750       --> CACCATAATTAACAGCTGCAGCTGTCCCCACAGCTACAGTTTGATCCGCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV543499       --> CACCATAATTAACAGCTGCAGCTGTCCCCACAGCTACAGTTTGATCCGCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX760906       --> CACCATAATTAACAGCTGCAGCTGTCCCCACAGCTACAGTTTGATCCGCA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY902150       --> CACCATAATTAACAGCTGCAGCTGTCCCCACAGCTACAGTTTGATCCGCA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY904404       --> CACCATAATTAACAGCTGCAGCTGTCCCCACAGCTACAGTTTGATCCGCA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD966945       --> CACCATAATTAACAGCTGCAGCTGTCCCCACAGCTACAGTTTGATCCGCA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD530566       --> CACCACAATTAACAGCTGCAGCTGTCCCCACAGCTACAGTTTGATCCGCA  Raphanus raphanistrum subsp. maritimus
FY430068       --> CATCACAATTAACAGCTGCAGCTGTCCCCACAGCTACAGTTTGATCCGCA  Raphanus sativus cv GSK3-1

               301    -    351
UN21843        --> GCTGCAGTTGTCGCACTCCGTGTTGTAGTTCTTCTCGCAACTGCAAGAGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY914269       <-- GCTGCAGTTGTCGCACTCCGTGTTGTAGTTCTTCTCGCAACTGCAAGAGT
EY931997       <-- GCTGCAGTTGTCGCACTCCGTGTTGTAGTTCTTCTCGCAACTGCAAGAGT
FD970636       <-- GCTGCAGTTGTCGCACTCCGTGTTGTAGTTCTTCTCGCAACTGCAAGAGT
FD978788       <-- GCTGCAGTTGTCGCACTCCGTGTTGTAGTTCTTCTCGCAACTGCAAGAGT
FD541613       <-- GCTGCAGTTGTCGCACTCAGTGTTGTAGTTCTTCTCGCAACTGCAAGAGT
EV536265       <-- GCTGCAGTTGTCGCACTCCGTGTTGTAGTTCTTCTCGCAACTGCAAGAGT
EY899545       <-- GCTGCAGTTGTCGCACTCCGTGTTGTAGTTCTTCTCGCAACTGCAAGAGT
EV547984       <-- GCTGCAGTTGTCGCACTCCGTGTTGTAGTTCTTCTCGCAACTGCAAGAGT
EW717158       <-- GCTGCAGTTGTCGCACTCCGTGTTGTAGTTCTTCTCGCAACTGCAAGAGT
EV539632       <-- GCTGCAGTTGTCGCACTCCGTGTTGTAGTTCTTCTCGCAACTGCAAGAGT
EV547666       <-- GCTGCAGTTGTCGCACTCCGTGTTGTAGTTCTTCTCGCAACTGCAAGAGT
EX757282       <-- GCTGCAGTTGTCGCACTCCGTGTTG.........................
EY908755       <-- GCTGCAGTTGTCGCACTCCGTGTTGTAGTTCTTCTCGCAACTGCAAGAGT
EY921196       <-- GCTGCAGTTGTCGCACTCCGTGTTGTAGTTCTTCTCGCAACTGCAAGAGT
EY946144       <-- GCTGCAGTTGTCGCACTCCGTGTTGTAGTTCTTCTCGCAACTGCAAGAGT
FD974272       <-- GCTGCAGTTGTCGCACTCCGTGTTGTAGTTCTTCTCGCAACTGCAAGAGT
EY937882       <-- GCTGCAGTTGTCGCACTCCGTGTTGTAGTTCTTCTCGCAACTGCAAGAGT
FD947384       <-- GCTGCAGTTGTCGCACTCCGTGTTGTAGTTCTTCTCGCAACTGCAAGAGT
FD534713       <-- GCTGCAGTTGTCGCACTCCGTGTTGTAGTTCTTCTCGCAACTGCAAGAGT
EY905806       <-- GCTGCAGTTGTCGCACTCCGTGTTGTAGTTCTTCTCGCAACTG-GAGAGT
EY910346       --> GCTGCAGTTGTCGCACTCCGTGTTGTAGTTCTTCTCGCAACTGCAAGAGT
EY895289       --> GCTGCAGTTGTCGCACTCCGTGTTGTAGTTCTTCTCGCAACTGCAAGAGT
FD974964       --> GCTGCAGTTGTCGCACTCCGTGTTGTAGTTCTTCTCGCAACTGCAAGAGT
EX892574       --> GCTGCAGTTGTCCCACTCCGTGTTGTAGTTCTTCTCGCAACTGCAAGAGT
FD537854       --> GCTGCAGTTGTCGCACTCAGTGTTGTAGTTCTT.................
EV540752       --> GCTGCAGTTGTCGCACTCCGTGTTGTAGTTCTTCTCGCAACTGCAAAAGT
EV543750       --> GCTGCAGTTGTCGCACTCCGTGTTGTAGTTCTTCTCGCAACTGCAAGAGT
EV543499       --> GCTGCAGTTGTCGCACTCCGTGTTGTAGTTCTTCTCGCAACTGCAAGAGT
EX760906       --> GCTGCAGTTGTCGCACTCCGTGTTGTAGTTCTTCTCGCAACTGCAAGAGT
EY902150       --> GCTGCAGTTGTCGCACTCCGTGTTGTAGTTCTTCTCGCAACTG-GAGAGT
EY904404       --> GCTGCAGTTGTCGCACTCCGTGTTGTAGTTCTTCTCGCAACTGCAAGAGT
FD966945       --> GCTGCAGTTGTCGCACTCCGTGTTGTAGTTCTTCTCGCAACTGCAAGAGT
FD530566       --> GCTGCAGTTGTCGCACTCCGTGTTGTAGTTCTTCTCGCAACTGCAAGAGT
FY430068       --> GCTGCAGTTGTCGCACTCCGTGTTGTAGTTCTTCTCGCAACTGCAAGAGT

               351    -    401
UN21843        --> CGCCACATTTGCAACCGGAACCACATCCACAGTTAGAACCTGCCATTGCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY914269       <-- CGCCACATTTGCAACCGGAACCACATCCACAGTTAGAACCTGCCATTGCT
EY931997       <-- CGCCACATTTGCAACCGGAACCACATCCACAGTTAGAACCTGCCATTGCT
FD970636       <-- CGCCACATTTGCAACCGGAACCACATCCACAGTTAGAACCTGCCATTGCT
FD978788       <-- CGCCACATTTGCAACCGGAACCACATCCACAGTTAGAACCTGCCATTGCT
FD541613       <-- CGCCACATTTGCAACCGGAACCACATCCACAGTTAGAACCTGCCATTGCT
EV536265       <-- CGCCACATTTGCAACCGGAACCACATCCACAGTTAGAACCTGCCATTGCT
EY899545       <-- CGCCACATTTGCAACC..................................
EV547984       <-- CGCCACATTTGCAACCGGAACCACATCCACAGTTAGAACCTGCCATTGCT
EW717158       <-- CGCCACATTTGCAACCGGAACCACATCCACAGTTAGAACCTGCCATTGCT
EV539632       <-- CGCCACATTTGCAACCGGAACCACATCCACAGTTAGAACCTGCCATTGCT
EV547666       <-- CGCCACATTTGCAACCGGAACCACATCCACAGTTAGAACCTGCCATTGCT
EX757282       <-- ..................................................
EY908755       <-- CGCCACATTTGCAACCGGAACCACGTCCACAGTTAGAACCTGCCATTGCT
EY921196       <-- CGCCACATTTGCAACCGGAACCACATCCACAGTTAGAACCTGCCATTGCT
EY946144       <-- CGCCACATTTGCAACCGGAACCACATCCACAGTTAGAACCTGCCATTGCT
FD974272       <-- CGCCACATTTGCAACCGGAACCACATCCACAGTTAGAACCTGCCATTGCT
EY937882       <-- CGCCACATTTGCAACCGGAACCACATCCACAGTTAGAACCTGCCATTGCT
FD947384       <-- CGCCACATTTGCAACCGGAACCACATCCACAGTTAGAACCTGCCATTGCT
FD534713       <-- CGCCACATTTGCAACCGGAACCACATCCACAGTTAGAACCTGCCATTGCT
EY905806       <-- CGCCACATTTGCAACCGGAACCACATCCACAGTTAGAACCTGCCATTGCT
EY910346       --> CGCCACATTTGCAACCGGAACCACATCCACAGTTAGAACCTGCCATTGCT
EY895289       --> CGCCACATTTGCAACC..................................
FD974964       --> CGCCACATTTGCAACCGGAACCACATCCACAGTTAGAACCTGCCATTGCT
EX892574       --> CGCCACATTTGCAACCGGAACCACATCCACAGTTAGAACCTGCCATTGCT
FD537854       --> ..................................................
EV540752       --> CGCCACATTTGCAACCGGAACCACATCCACAGTTAAAACCTGCCATTGCT
EV543750       --> CGCCACATTTGCAACCGGAACCACATCCACAGTTAGAACCTGCCATTGCT
EV543499       --> CGCCACATTTGCAACCGGAACCACATCCACAGTTAGAACCTGCCATTGCT
EX760906       --> CGCCACATTTGCAACCGc................................
EY902150       --> CGCCACATTTGCAACCGGAACCACATCCACAGTTAGAACCTGCCATTGCT
EY904404       --> CGCCACATTTGCAACCGGAACCACGTCCACAGTTAGAACCTGCCATTGCT
FD966945       --> CGCCACATTTGCAACCGGAACCACATCCACAGTTAGAA............
FD530566       --> CGCCACATTTGCAACCGGAACCACATCCACAGTTAGAACCTGCCATTGCT
FY430068       --> CGCCACATTTGCAACCGGAACCACATCCACAGTTAGAACCTGCCATTGCT

               401    -    451
UN21843        --> TCTCTTCTCTTTAATTTAAAGTTGTAGTTTGTTTGTTTTTCTTCTTTTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY914269       <-- TCTCTTCTCTTTAATTTAAAGTTGTAGTTTGTTTGTTTTTCTTCTTTTTG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY931997       <-- TCTCTTCTCTTTAATTTAAAGTTGTAGTTTGTTTGTTTTTCTTCTTTTTG  Raphanus sativus var. oleiformis
FD970636       <-- TCTCTTCTCTTTAATTTAAAGTTGTAGTTTGTTTGTTTTTCTTCTTTTTG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD978788       <-- TCTCCTCTCTTTAATTTAAAGTTGTAGTTTGTTTGTTTTTCTTCTTTTTG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD541613       <-- TCTCTTCTCTTTAATTTAAAGTTGTAGTTTGTTTGTTTTTCTTCTTTTTG  Raphanus raphanistrum subsp. raphanistrum (MS)
EV536265       <-- TCTCTTCTCTTTAATTTAAAGTTGTAGTTTGTTTGTTTTTCTTCTTTTTG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY899545       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EV547984       <-- TCTCTTCTCTTTAATTTAAAGTTGTAGTTTGTTTGTTTTTCTTCTTTTTG  Raphanus raphanistrum subsp. raphanistrum (NY)
EW717158       <-- TCTCTTCTCTTTAATTTAAAGTTGTAGTTTATTTGTTTTTCTTCTTTTTG  Raphanus sativus var. oleiformis
EV539632       <-- TCTCTTCTCTTTAATTTAAAGTTGTAGTTTGTTTGTTTTTCTTCTTTTTG  Raphanus raphanistrum subsp. raphanistrum (MS)
EV547666       <-- TCTCTTCTCTTTAATTTAAAGTTGTAGTTTGTTTGTTTTTCTTCTTTTTG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX757282       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY908755       <-- TCTCTTCTCTTTAATTTAAAGTTGTAGTTTGTTTGTTTTTCTTCTTTTTG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY921196       <-- TCTCTTCCCTTTAATTTAAAGTTGTAGTTTGTTTTCTTTTCTTCTTTTTG  Raphanus raphanistrum subsp. landra
EY946144       <-- TCTCTTCTCTTTAATTTAAAGTTGTAGTTTGTTTGTTTTTCTTCTTTTTG  Raphanus sativus cv Rat-Tail Radish #3870
FD974272       <-- TCTCTTCTCTTTAATTTAAAGTTGTAGTTTGTTTGTTTTTCTTCTTTTTG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY937882       <-- TCTCTTCCCTTTAATTTAAAGTTGTAGTTTGTTTTCTTTTCTTCTTTTTG  Raphanus sativus cv Early Scarlet Globe
FD947384       <-- TCTCTTCCCTTTAATTTAAAGTTGTAGTTTGCTTTCTTTTCTTCTTTTTG  Raphanus sativus cv Early Scarlet Globe
FD534713       <-- TCTCTTCCCTTTAATTTAAAGTTGTAGTTTGTTTTCTTTTCTTCTTTTTG  Raphanus raphanistrum subsp. maritimus
EY905806       <-- TCTCTTCTCTTTAATTTAAAGTTGTAGTTTGTTTGTTTTTCTTCTTTTTG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY910346       --> TCTCTTCTCTTTAATTTAAAGTTGTAGTTTGTTTGTTTTTCTTCTTTTTG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY895289       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD974964       --> TCTCCTCTCTTTAATTTAAAGTTGTAGTTTGTTTGTTTTTCTTCTTTTTG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX892574       --> TCTCTTCTCTTTAATTTAAAGTTGTAGTTTGTTTGTTTTTCTTCTTTTTG  Raphanus sativus var. oleiformis
FD537854       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV540752       --> TCTCTTCTCTTTAATTTAAAGTTGTAGTTTGTTTGTTTTTCTTCTTTTTG  Raphanus raphanistrum subsp. raphanistrum (MS)
EV543750       --> TCTCTTCTCTTTAATTTAAAGTTGTAGTTTGTTTGTTTTTCTTCTTTTTG  Raphanus raphanistrum subsp. raphanistrum (NY)
EV543499       --> TCTCTTCTCTTTAATTTAAAGTTGTAGTTTGTTTGTTTTTCTTCTTTTTG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX760906       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY902150       --> TCTCTTCTCTTTAATTTAAAGTTGTAGTTTGTTTGTTTTTCTTCTTTTTG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY904404       --> TCTCTTCTCTTTAATTTAAAGTTGTAGTTTGTTTGTTTTTCTTCTTTTTG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD966945       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD530566       --> TCTCTTCCCTTTAATTTAAAGTTGTAGTTTGTTTTCTTTTCTTCTTTTTG  Raphanus raphanistrum subsp. maritimus
FY430068       --> TCTCTTCTCTTTAATTTAAAGTTGTAGTTTGTTTGTTTTTCTTCTTTTTG  Raphanus sativus cv GSK3-1

               451    -    501
UN21843        --> ATTGCTTTATGTGTTGTGTCC
                   ~~~~~~~~~~~~~~~~~~~~~
EY914269       <-- ATTGCTTTATGTGCTGTcc..  Raphanus raphanistrum subsp. raphanistrum (NY)
EY931997       <-- ATTGCTTTATGTGTTGTGTCC  Raphanus sativus var. oleiformis
FD970636       <-- ATTGCTTTATGTGTTGTcc..  Raphanus raphanistrum subsp. raphanistrum (MS)
FD978788       <-- ATTGCTTTATGTGCTGTcc..  Raphanus raphanistrum subsp. raphanistrum (NY)
FD541613       <-- ATTGCTTTATGTGTTccc...  Raphanus raphanistrum subsp. raphanistrum (MS)
EV536265       <-- ATTGCTTTATGTGTTGTcc..  Raphanus raphanistrum subsp. raphanistrum (MS)
EY899545       <-- .....................  Raphanus raphanistrum subsp. maritimus
EV547984       <-- ATTGCTTTATGTGCTGTcc..  Raphanus raphanistrum subsp. raphanistrum (NY)
EW717158       <-- ATc..................  Raphanus sativus var. oleiformis
EV539632       <-- ATTGCTTTATGTGTTGTcc..  Raphanus raphanistrum subsp. raphanistrum (MS)
EV547666       <-- ATTGCTTTATGTGCTGTcc..  Raphanus raphanistrum subsp. raphanistrum (NY)
EX757282       <-- .....................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY908755       <-- ATTGCTTTATGTGTTGTcc..  Raphanus raphanistrum subsp. raphanistrum (MS)
EY921196       <-- ATT..................  Raphanus raphanistrum subsp. landra
EY946144       <-- ATTGCTTTATGTGTTGTcc..  Raphanus sativus cv Rat-Tail Radish #3870
FD974272       <-- ATTGCTTTATGTGTTGTGTCC  Raphanus raphanistrum subsp. raphanistrum (MS)
EY937882       <-- ATT..................  Raphanus sativus cv Early Scarlet Globe
FD947384       <-- ATT..................  Raphanus sativus cv Early Scarlet Globe
FD534713       <-- ATT..................  Raphanus raphanistrum subsp. maritimus
EY905806       <-- ATTGCTTTATGTGTTGTcc..  Raphanus raphanistrum subsp. raphanistrum (MS)
EY910346       --> ATTGCTTTATGTGCTGTcc..  Raphanus raphanistrum subsp. raphanistrum (NY)
EY895289       --> .....................  Raphanus raphanistrum subsp. maritimus
FD974964       --> ATTGCTTTATGTGCTGTcc..  Raphanus raphanistrum subsp. raphanistrum (NY)
EX892574       --> ATTGCTTTATGTGTcc.....  Raphanus sativus var. oleiformis
FD537854       --> .....................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV540752       --> ATTGCTTTATGTGTTGTcc..  Raphanus raphanistrum subsp. raphanistrum (MS)
EV543750       --> ATTGCTTTATGTGCTGTcc..  Raphanus raphanistrum subsp. raphanistrum (NY)
EV543499       --> ATTGCTTTATGTGCTGTcc..  Raphanus raphanistrum subsp. raphanistrum (NY)
EX760906       --> .....................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY902150       --> ATTGCTTTATGTGTTGTcc..  Raphanus raphanistrum subsp. raphanistrum (MS)
EY904404       --> ATTGCTTTATGTGTTGTcc..  Raphanus raphanistrum subsp. raphanistrum (MS)
FD966945       --> .....................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD530566       --> ATT..................  Raphanus raphanistrum subsp. maritimus
FY430068       --> ATTGCTTT.............  Raphanus sativus cv GSK3-1