RadishBase

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Alignment for radish unigene UN21856

               1      -     51
UN21856        --> AAGAATCGGTCTTTATTTTCATTAAGAAATTGACTACTAAACTTCCT-GG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY439444       <-- ..................................................
FD965713       <-- ..................................................
FY449912       <-- ..................................................
EV552229       <-- ..................................................
EV528972       <-- ..................................................
FD948941       <-- ..................................................
EV567896       <-- ..................................................
FD978304       <-- ..................................................
EV537136       <-- ..................................................
EW732010       <-- ..................................................
EX757289       <-- ..................................................
FY450503       <-- ..................................................
EW732438       <-- ..................................................
FD541135       <-- ..................................................
EV541434       --> AAGAATCGGTCTTTATTTTCATTAAGAAATTGACTACCAAACTTCCTTGG
FD985875       --> .......................aaaAAATCGACTACTAAACTTCCT-GG
FD944655       --> ..................................................
FD974577       --> ...............................................agc
EV532828       --> ..................................................
EV547182       --> ..................................................
FD969735       --> ..................................................
EW736381       --> ..................................................

               51     -    101
UN21856        --> AAAACAGAAAAAATCCTTTTTGCCAACACTTTTGTATGTTAATACTACAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY439444       <-- ..................................................
FD965713       <-- ..................................................
FY449912       <-- ..................................................
EV552229       <-- ..................................................
EV528972       <-- ..................................................
FD948941       <-- ..................................................
EV567896       <-- ..................................................
FD978304       <-- ..................................................
EV537136       <-- ..................................................
EW732010       <-- ..................................................
EX757289       <-- ..................................................
FY450503       <-- ..................................................
EW732438       <-- ..................................................
FD541135       <-- ..................................................
EV541434       --> AAAACAGAAAAAATCCTTTTTGCCAACACTTTTGTACGTTAATACTACAC
FD985875       --> AAAACAGAAAAAATCCTCTTTGCCAACACATTTGTATGTTAATACTACAC
FD944655       --> ....caaAAAAAATCCTCTTTGCCAACACATTTGTATGTTAATACTACAC
FD974577       --> aggaaaaAAAAAATCCTTTTTGCCAACACTTTTGTATGTTAATACTACAC
EV532828       --> .....................GCCAACACTTTTGTATGTTAATACTACAC
EV547182       --> .....................GCCAACACTTTTGTATGTTAATACTACAC
FD969735       --> .....................GCCAACACTTTTGTATGTTAATACTACAC
EW736381       --> ..................................................

               101    -    151
UN21856        --> GTGTTTGCTTACAGACTGTAACAGCTACATATTCCAGAGTGACTAAGCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY439444       <-- ..................................................
FD965713       <-- ..................................................
FY449912       <-- ..................................................
EV552229       <-- ..................................................
EV528972       <-- ..................................................
FD948941       <-- ..................................................
EV567896       <-- ..................................................
FD978304       <-- ..................................................
EV537136       <-- ..................................................
EW732010       <-- ..................................................
EX757289       <-- ..................................................
FY450503       <-- ..................................................
EW732438       <-- ..................................................
FD541135       <-- ..................................................
EV541434       --> ATGTTTGCTTACAGACTGTAACAGCTACATATTCCAGAGTGACTAAGCAA
FD985875       --> GTGTTTGCTTACAGACTGTAACAGCTACATATTCCAGAGTGACTAAGCAA
FD944655       --> GTGTTTGCTTACAGACTGTAACAGCTACATATTCCAGAGTGACTAAGCAA
FD974577       --> GTGTTTGCTTAC-GACTGTAACAGCTACATATTCCAAAGTGACTAAGCAA
EV532828       --> GTGTTTGCTTACAGACTGTAACAGCTACATATTCCAGAGTGACTAAGCAA
EV547182       --> GTGTTTGCTTACAAACTGTAACAGCTACATATTCCAGAGTGACTAAGCAA
FD969735       --> GTGTTTGCTTACAGACTGTAACAGCTACATATTCCAGAGTGACTAAGCAA
EW736381       --> ........TTACAGACTGTAACAGCTACATATTCCAGAGTGACTAAGCAA

               151    -    201
UN21856        --> ATTGAGATTCAAACATTTGTAAGTGTGAATTAACTGATCATCTAAGTCCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY439444       <-- ..................................................
FD965713       <-- ..................................................
FY449912       <-- ..................................................
EV552229       <-- ..................................................
EV528972       <-- ..................................................
FD948941       <-- ..................................................
EV567896       <-- ..................................................
FD978304       <-- ..................................................
EV537136       <-- ..................................................
EW732010       <-- ..................................................
EX757289       <-- ..................................................
FY450503       <-- ..................................................
EW732438       <-- ..................................................
FD541135       <-- ..................................................
EV541434       --> ATTGAGATTCAAACATTTGTAAGTGTGAATTAACTGATCATCTTAGTCCT
FD985875       --> ATCGAGATTCAAACATTTTTAAGTGTGAATTAACTGATCATCTTAGTCCG
FD944655       --> ATCGAGATTCAAACATTTTTAAGTGTGAATTAACTGATCATCTTAGTCCG
FD974577       --> ATTGAGATTCAAACATTTGTAAGTGTGAATTAACTGATCATCTAAGTCCT
EV532828       --> ATTGAGATTCAAACATTTGTAAGTGTGAATTAACTGATCATCTAAGTCCT
EV547182       --> ATTGAGATTCAAACATTTGTAAGTGTGAATTAACTGATCATCTAAGTCCT
FD969735       --> ATTGAGATTCAAACATTTGTAAGTGTGAATTAACTGATCATCTAAGTCCT
EW736381       --> ATTGAGATTCAAACATTTGTAAGTGTGAATTAACTGATCATCTAAGTCCT

               201    -    251
UN21856        --> GCTGAAGCTGTTGGATTGCCTCCTCCAGGTCTTCCCATGGCTCTCTGGGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY439444       <-- .....................................TGGCTCTCTGGGC
FD965713       <-- ..................................................
FY449912       <-- ..................................................
EV552229       <-- ..................................................
EV528972       <-- ..................................................
FD948941       <-- ..................................................
EV567896       <-- ..................................................
FD978304       <-- ..................................................
EV537136       <-- ..................................................
EW732010       <-- ..................................................
EX757289       <-- ..................................................
FY450503       <-- ..................................................
EW732438       <-- ..................................................
FD541135       <-- ..................................................
EV541434       --> GCTGAAGCTGTTGGATTGCCTCCTCCAGGTCTTCCCATGGCTCTCTGGGC
FD985875       --> GCTGAAGCTGTTGGATTGCCTCCTCCAGGTCTTCCCATGGCTCTCTGGGC
FD944655       --> GCTGAAGCTGTTGGATTGCCTCCTCCAGGTCTTCCCATGGCTCTCTGGGC
FD974577       --> GCTGAAGCTGTTGGATTGCCTCCTCCAGGTCTTCCCATGGCTCTCTGGGC
EV532828       --> GCTGAAGCTGTTGGATTGCCTCCTCCAGGTCTTCCCATGGCTCTCTGGGC
EV547182       --> GCTGAAGCTGTTGGATTGCCTCCTCCAGGTCTTCCCATGGCTCTCTGGGC
FD969735       --> GCTGAAGCTGTTGGATTGCCTCCTCCAGGTCTTCCCATGGCTCTCTGGGC
EW736381       --> GCTGAAGCTGTTGGATTGCCTCCTCCAGGTCTTCCCATGGCTCTCTGGGC

               251    -    301
UN21856        --> AAGAGACCCATCGTAATCCCGTTTCTCAAAGGAACTATCCTGAGAGTCAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY439444       <-- AAGAGACCCATCGTAATCCCGTTTCTCAAAGGAACTATCCTGAGAGTCAG
FD965713       <-- ..................................................
FY449912       <-- ..................................................
EV552229       <-- ..................................................
EV528972       <-- ..................................................
FD948941       <-- ..................................................
EV567896       <-- ..................................................
FD978304       <-- ..................................................
EV537136       <-- ..................................................
EW732010       <-- ..................................................
EX757289       <-- ..................................................
FY450503       <-- ..................................................
EW732438       <-- ..................................................
FD541135       <-- ..................................................
EV541434       --> AAGAGACCCATCGTAATCCCGTTTCTCAAAGGAACTATCCTGAGAGTCAG
FD985875       --> AAGAGACCCATCGTAATCCCGTTTCTCAAAGGAACTATCCTGAGAGTCAG
FD944655       --> AAGAGACCCATCGTAATCCCGTTTCACAAAGGAACTATCCTGAGAGTCAG
FD974577       --> AAGAAACCCATCGTAATCCCGTTTCTCGAAGGAACTATCCTGAGAGTCAG
EV532828       --> AAGAGACCCATCGTAATCCCGTTTCTCAAAGGAACTATCCTGAGAGTCAG
EV547182       --> AAGAGACCCATCGTAATCCCGTTTCTCGAAGGAACTATCCTGAGAGTCAG
FD969735       --> AAGAGACCCATCGTAATCCCGTTTCTCAAAGGAACTATCCTGAGAGTCAG
EW736381       --> AAGAGACCCATCGTAATCCCGTTTCTCAAAGGAACTATCCTGAGAGTCAG

               301    -    351
UN21856        --> CTATCTTGTCTGCGACTCCATAGTCAATGGCTGCTTGTGCTTGGAGATAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY439444       <-- CTATCTTGTCTGCGACTCCATAGTCAATGGCTGCTTGTGCTTGGAGATAT
FD965713       <-- ..................................................
FY449912       <-- ..................................................
EV552229       <-- ..................................................
EV528972       <-- ..................................................
FD948941       <-- ..................................................
EV567896       <-- ..................................................
FD978304       <-- ..................................................
EV537136       <-- ..................................................
EW732010       <-- ..................................................
EX757289       <-- ..................................................
FY450503       <-- ..................................................
EW732438       <-- ..................................................
FD541135       <-- ..................................................
EV541434       --> CTATCTTGTCTGCTACTCCATAGTCAATGGCTGCTTGTGCTTGGAGATAT
FD985875       --> CTATCTTGTCTGCGACTCCATAGTCAATGGCTGCTTGTGCTTGGAGATAT
FD944655       --> CTATCTTGTCTGCGACTCCATAGTCAATGGCTGCTTGTGCTTGGAGATAT
FD974577       --> CTATCTTGTCTGCGACTCCATAGTCAATGGCTGCTTGTGCTTGGAGATAT
EV532828       --> CTATCTTGTCTGCGACTCCATAGTCAATGGCTGCTTGTGCTTGGAGATAT
EV547182       --> CTATCTTGTCTGCGACTCCATAGTCAATGGCTGCTTGTGCTTGGAGATAT
FD969735       --> CTATCTTGTCTGCGACTCCATAGTCAATGGCTGCTTGTGCTTGGAGATAT
EW736381       --> CTATCTTGTCTGCGACTCCATAGTCAATGGCTGCTTGTGCTTGGAGATAT

               351    -    401
UN21856        --> TTCGGTCGCTTGATGTCCTCGTTGATCTGCTCTTTAGTTTTACCTGTTCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY439444       <-- TTCGGTCGCTTGATGTCCTCGTTGATCTGCTCTTTAGTTTTACCTGTTCC
FD965713       <-- ..................................................
FY449912       <-- ..................................................
EV552229       <-- ..................................................
EV528972       <-- ..................................................
FD948941       <-- ..................................................
EV567896       <-- ..................................................
FD978304       <-- ..................................................
EV537136       <-- ..................................................
EW732010       <-- ..................................................
EX757289       <-- ..................................................
FY450503       <-- ..................................................
EW732438       <-- ..................................................
FD541135       <-- ..................................................
EV541434       --> TTCGGTCGCTTGATGTCCTCGTTGATCTGCTCTTTAGTTTTACCTGTTCC
FD985875       --> TTCGGTCGCTTGATGTCCTCGTTGATCTGCTCTTTAGTTTTACCTGTTCC
FD944655       --> TTCGGTCGCTTGATGTCCTCGTTGATCTGCTCTTTAGTATTACCTGTTCC
FD974577       --> TTCGGTCGCTTGATGTCCTCGTTGATCTGCTCTTTAGTTTTACCTGTTCC
EV532828       --> TTCGGTCGCTTGATGTCCTCGTTGATCTGCTCTTTGGATTTACCTGTTCC
EV547182       --> TTCGGTCGCTTGATGTCCTCGTTGATCTGCTCTTTAGTTTTACCTGTTCC
FD969735       --> TTCGGCCTCTTGATGTCCTCGTTGATCTGCTCTTTAGATTTACCTGTTCC
EW736381       --> TTCGGTCGCTTGATGTCCTCGTTGATCTGCTCTTTAGATTTACCTGTTCC

               401    -    451
UN21856        --> CTTAGCTAACAGCTCGATGTAATACTCAGTATTTGCATCAAGTTCCTTGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY439444       <-- CTTAGCTAACAGCTCGATGTAATACTCAGTATTTGCATCAAGTTCCTTGG
FD965713       <-- .................................................G
FY449912       <-- ..................................................
EV552229       <-- ..................................................
EV528972       <-- ..................................................
FD948941       <-- ..................................................
EV567896       <-- ..................................................
FD978304       <-- ..................................................
EV537136       <-- ..................................................
EW732010       <-- ..................................................
EX757289       <-- ..................................................
FY450503       <-- ..................................................
EW732438       <-- ..................................................
FD541135       <-- ..................................................
EV541434       --> CTTAGCTAACAGCTCGATGTAATACTCAGTATTTGCATCAAGTTCCTTGG
FD985875       --> CTTAGCTAACAGCTCGATGTAATACTCAGTATTTGCATCAAGTTCCTTGG
FD944655       --> CTTAGCTAACAGCTCGATGTAATACTCAGTATTTGCATCAAGTTCCTTGG
FD974577       --> CTTAGCTAACAGCTCGATGTAATACTCAGTATTTGCATCAAGTTCCTTGG
EV532828       --> CTTAGCTAACAGCTCGATGCAATACTCTGTATTTGCATCAAGTTCCTTGG
EV547182       --> CTTAGCTAACAGCTCGATGTAATACTCAGTATTTGCATCAAGTTCCTTGG
FD969735       --> CTTAGCTAACAGCTCGATGTAATACTCAGTATATGCATCAAGTTCCTTGG
EW736381       --> CTTAGCTAACAGCTCGATGTAATACTCAGTATTCGCATCAAGTTCCTTGG

               451    -    501
UN21856        --> CCTTTATCCACATGTCTATGGCAGCTCCACTCGATCTGTTTACTTTTGGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY439444       <-- CCTTTATCCACATGTCTATGGCAGCTCCGCTCGATCTGTTTACTTTTGGC
FD965713       <-- CCTTTATCCACATATCTATGGCAGCTCCACTCGATCTGTTTACTTTTGGC
FY449912       <-- .................................................C
EV552229       <-- ..................................................
EV528972       <-- ..................................................
FD948941       <-- ..................................................
EV567896       <-- ..................................................
FD978304       <-- ..................................................
EV537136       <-- ..................................................
EW732010       <-- ..................................................
EX757289       <-- ..................................................
FY450503       <-- ..................................................
EW732438       <-- ..................................................
FD541135       <-- ..................................................
EV541434       --> CCTTTATCCACATGTCTATGGCAGCTCCACTCGATCTGTTTACTTTTGGC
FD985875       --> CCTTTATCCACATGTCTATGGCAGCTCCGCTCGATCTGTTTACTTTTGGC
FD944655       --> CCTTTATCCACATGTCTATGGCAGCTCCGCTCGATCTGTTTACTTTTGGC
FD974577       --> CCTTTATCCACATGTCTATGGCAGCTCCCCTCGATCTGGTTACTTTTGGC
EV532828       --> CCTTTATCCACATATCTATGGCAGCTCCACTCGATCTGTTTACTTTTGGC
EV547182       --> CCTTTATCCACATGTCTATGGCAGCTCCGCTCGATCTGGTTACTTTTGGC
FD969735       --> CCTTTATCCACATGTCTATGGCAGCTCCACTCGATCTGTTTACTTTTGGC
EW736381       --> CCTTTATCCACATATCTATGGCAGCTCCACTCGATCTGTTTACTTTTGGC

               501    -    551
UN21856        --> AGATATAGTTTTGTTGATGAATGTGGTTGTACGGCACGATAACCCTTTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY439444       <-- AGATATAGTTTTGTTGATGAATGTGGTTGTACGGCACGATAACCCTTTTT
FD965713       <-- AGATATAGTTTTGTTGATGAATGTGGTTGTACGGCACGATAACCCTTTTT
FY449912       <-- AGATATAGTTTTGTTGATGAATGTGGTTGTACGGCACGATAACCCTTTTT
EV552229       <-- ................................................TT
EV528972       <-- ..................................................
FD948941       <-- ..................................................
EV567896       <-- ..................................................
FD978304       <-- ..................................................
EV537136       <-- ..................................................
EW732010       <-- ..................................................
EX757289       <-- ..................................................
FY450503       <-- ..................................................
EW732438       <-- ..................................................
FD541135       <-- ..................................................
EV541434       --> AGATATAGTTTTGTTGATGAATGTGGTTGTACGGCACGATAACCCTTTTT
FD985875       --> AGATATAGTTTTGTTGATGAATGTGGTTGTACGGCACGATAACCCTTTTT
FD944655       --> AGATATAGTTTTGTTGATGAATGTGGTTGTACGGCACGATAACCCTTTTT
FD974577       --> AAATATAGTTTTGTTGATGAATGTGGTTGTACGGCACGATAACCCTTTTT
EV532828       --> AGATATAGTTTTGTTGATGAATGTGGTTGTACGGCACGATAACCCTTTTT
EV547182       --> AGATATAGTTTTGTTGATGAATGTGGTTGTACGGCACGATAACCCTTTTT
FD969735       --> AGATATAGTTTTGTTGATGAATGTGGTTGTACGGCACGATAACCCTTTTT
EW736381       --> AGATATAGTTTTGTTGATGAATGTGGTTGTACGGAACGATAACCCTTTTT

               551    -    601
UN21856        --> CCCAAGAGAAAGAAGCATTGCTGCTTGTCCAAAAGCCATGCCACAGTTGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY439444       <-- CCCGAGAGAAAGAAGCATTGCTGCTTGTCCAAAAGCCATGCCACAGTTGA  Raphanus sativus cv GSK3-1
FD965713       <-- ACCAAGAGAAAGAAGCATTGCTGCTTGACCAAAAGCCATTCCACAATTGA  Raphanus raphanistrum subsp. maritimus
FY449912       <-- CCCGAGAGAAAGAAGCATTGCTGCTTGTCCAAAAGCCATGCCACAGTTGA  Raphanus sativus cv GSK3-1
EV552229       <-- CCCAAGAGAAAGAAGCATTGCTGCTTGTCCAAAAGCCATGCCACAGTTGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV528972       <-- .............................CAAAAGCCAT-CCACAATTGA  Raphanus raphanistrum subsp. maritimus
FD948941       <-- ..............................cAAAGCCATGCCACAGT-GA  Raphanus sativus cv Early Scarlet Globe
EV567896       <-- ....................................CATGCCACAGTTGA  Raphanus raphanistrum subsp. landra
FD978304       <-- .....................................ATGCCACAGTTGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV537136       <-- .................................................A  Raphanus raphanistrum subsp. raphanistrum (MS)
EW732010       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EX757289       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FY450503       <-- ..................................................  Raphanus sativus cv GSK3-1
EW732438       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD541135       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV541434       --> CCCAAGAGAAAGAAGCATTGCTGCTTGACCAAAAGCCATTCCACAATTGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD985875       --> CCCGAAAGAAAGAAGCATTGCTGCTTGTCCAAAAGCCATGCCACAGTTGA  Raphanus raphanistrum subsp. landra
FD944655       --> CCCGAGAGAAAGAAGCATTGCTGCTTGTCCAAAAGCCATGCCACAGTTGA  Raphanus sativus cv Early Scarlet Globe
FD974577       --> CCCGAAAGAA........................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV532828       --> ACCAAGAGAAAGAAGCATTGCTGCTTGACCAAAAGCCATTCCACAATTGA  Raphanus raphanistrum subsp. maritimus
EV547182       --> CCCAAGAGAAAGAAGCATTGCTGCTTGTCCAAAAGCCATGCCACAGTTGA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD969735       --> CCCAAGAGAAAGAAGCATTGCTGCTTGACCAAAAGCCATTCCACAATTGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EW736381       --> ACCAAGAGAAAGAAGCATTGCTGCTTGACCAAAAGCCATTCCACAATTGA  Raphanus sativus cv Rat-Tail Radish #3870

               601    -    651
UN21856        --> TTGTGTATACATCTGATTTGCAATA---------AGAAATGGTGTCAGCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY439444       <-- TTGTGTATACATCTGATTTGCAATACTTTTTAAGAGAAATGGTGTCAGCT
FD965713       <-- TTGTGTATACATCTGATTTGCAATA---------AGAAATGGTGTCAGCT
FY449912       <-- TTGTGTATACATCTGATTTGCAATA---------AGAAATGGTGTCAGCT
EV552229       <-- TTGTGTATACATCTGATTTGCAATA---------AGAAATGGTGTCAGCT
EV528972       <-- TTGTGTATACATCTGATTTGCAATA---------AGAAATGGTGTCAGCT
FD948941       <-- TTGTGTATACATCTGATTTGCAATA---------AGAAATGGTGTCAGCT
EV567896       <-- TTGTGTATACATCTGATTTGCAATA---------AGAAATGGTGTCAGCT
FD978304       <-- TTGTGTATACATCTGATTTGCAATA---------AGAAATGGTGTCAGCT
EV537136       <-- TTGTGTATACATCTGATTTGCAATA---------AGAAATGGTGTCAGCT
EW732010       <-- ..................................................
EX757289       <-- ..................................................
FY450503       <-- ..................................................
EW732438       <-- ..................................................
FD541135       <-- ..................................................
EV541434       --> TTGTGTATACATCTGATTTGCAATA---------AGAAATGGTGTCAGCT
FD985875       --> TTGTGTATACATCTGATTTGCAATA---------AGAAATGGTGTCAGCT
FD944655       --> TTGTGTATACATCTGATTTGCAATA---------AGAAATGGTGTCAGCT
FD974577       --> ..................................................
EV532828       --> TTGTGTATACATCTGATTTGCAATA---------AGAAATGGTGTCAGCT
EV547182       --> TTGTGTATACATCTGATTTGCAATA---------AGAAATGGTGTCAGCT
FD969735       --> TTGTGTATACATCTGATTTGCAATA---------AGAAATGGTGTCAGCT
EW736381       --> TTGTGTATACATCTGATTTGCAATA---------AGAAATGGTGTCAGCT

               651    -    701
UN21856        --> ATGGCATAAGCCTCTGTTTCTGACCCAACAGTTTCCATCTTCTCATTCTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY439444       <-- ATGGCATAAGCCTCTGTTTCTGACCCGACAGTTTCCATCTTCTCATTCTG  Raphanus sativus cv GSK3-1
FD965713       <-- ATGGCATAAGCCTCTGTTTCTGACCCAACAGTCTCCATCTTCTCATTCTG  Raphanus raphanistrum subsp. maritimus
FY449912       <-- ATGGCATAAGCCTCTGTTTCTGACCCGACAGTTTCCATCTTCTCATTCTG  Raphanus sativus cv GSK3-1
EV552229       <-- ATGGCATAAGCCTCTGTTTCTGACCCAACAGTTTCCATCTTCTCATTCTG  Raphanus raphanistrum subsp. raphanistrum (NY)
EV528972       <-- ATGGCATAAGCCTCTGTTTCTGACCCAACAGTCTCCATCTTCTCATTCTG  Raphanus raphanistrum subsp. maritimus
FD948941       <-- ATGGCATAAGC-TCTGTTTCTGACCCAACAGTTTCCATCTTCTCATTCTG  Raphanus sativus cv Early Scarlet Globe
EV567896       <-- ATGGCATAAGCCTCTGTTTCTGACCCAACAGTTTCCATCTTCTCATTCTG  Raphanus raphanistrum subsp. landra
FD978304       <-- ATGGCATAAGC-TCTGTTTCTGACCCAACAGTTTCCATCT-CTCATTCTG  Raphanus raphanistrum subsp. raphanistrum (NY)
EV537136       <-- ATGGCGTAAGCCTCTGTT-CTGACCCAACAGTCTCCATCT-CTCATTCTG  Raphanus raphanistrum subsp. raphanistrum (MS)
EW732010       <-- .................................................G  Raphanus sativus cv Rat-Tail Radish #3870
EX757289       <-- .................................................G  Raphanus raphanistrum subsp. raphanistrum (MS)
FY450503       <-- ..................................................  Raphanus sativus cv GSK3-1
EW732438       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD541135       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV541434       --> ATGGCGTAAGCCTCTGTTTCTGACCCAACAGTCTCCATCTTCTCATTCTG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD985875       --> ATGGCATAAGCCTCTGTTTCTGACCCAACAGTTTCCATCTTCTCATTCTG  Raphanus raphanistrum subsp. landra
FD944655       --> ATGGCATAAGCCTCTGTTTCTGACCCAACAGTTTCCATCTTCTCATTCTG  Raphanus sativus cv Early Scarlet Globe
FD974577       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV532828       --> ATGGCATAAGCCTCTGTTTCTGACCCAACAGTCTCCATCTTCTCATTCTG  Raphanus raphanistrum subsp. maritimus
EV547182       --> ATGGCATAAGCCTCTGTTTCTGACCCAACAGTTTCCATCTTCTCATTCTG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD969735       --> ATGGCGTAAGCCTCTGTTTCTGACCCAACAGTCTCCATCTTCTCATTCTG  Raphanus raphanistrum subsp. raphanistrum (MS)
EW736381       --> ATGGCATAAGCCTCTGTTTCTGACCCAACAGTCTCCATCTTCTCATTCTG  Raphanus sativus cv Rat-Tail Radish #3870

               701    -    751
UN21856        --> AGTCCCAGGTGAGTTTATGTATAGATAGATGGGCTTTGCTGGGTTATCAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY439444       <-- AGTCCCAGGTGAGTTTATGTATAGATAGATGGGCTTTGCTGGGTTATCAT  Raphanus sativus cv GSK3-1
FD965713       <-- AGTCCCAGGTGAGTTTATGTATAGGTAGATGGGCTTTGCTGGGTTATCAT  Raphanus raphanistrum subsp. maritimus
FY449912       <-- AGTCCCAGGTGAGTTTATGTATAGATAGATGGGCTTTGCTGGGTTATCAT  Raphanus sativus cv GSK3-1
EV552229       <-- AGTCCCAGGTGAGTTTATGTATAGATAGATGGGCTTTGCTGGGTTATCAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EV528972       <-- AGTCCCAGGTGAGTTTATGTATAGGTAGATGGGCTTTGCTGGGTTATCAT  Raphanus raphanistrum subsp. maritimus
FD948941       <-- AGTCCCAGGTGAGTTTATGTATAGATAGATGGGCTTTGCTGGGTTATCAT  Raphanus sativus cv Early Scarlet Globe
EV567896       <-- AGTCCCAGGTGAGTTTATGTATAGATAGATGGGCTTTGCTGGGTTATCAT  Raphanus raphanistrum subsp. landra
FD978304       <-- AGTCCCAGGTGAGTTTATGTATAGATAGATGGGCTTTGCTGGGTTATCAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EV537136       <-- AGTCCCAGGTGAGTTTATGTATAGATAGATGGGCTTTGCTGGGTTATCAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EW732010       <-- AGTCCCAGGTGAGTTTATGTATAGGTAGATGGGCTTTGCTGGGTTATCAT  Raphanus sativus cv Rat-Tail Radish #3870
EX757289       <-- AGTCCCAGGTGAGTTTATGTATAGATAGATGGGCTTTGCTGGGTTATCAT  Raphanus raphanistrum subsp. raphanistrum (MS)
FY450503       <-- ...CCCAGGTGAGTTTATGTATAGATAGATGGGCTTTGCTGGGTTATCAT  Raphanus sativus cv GSK3-1
EW732438       <-- ...........AGTTTATGTATAGATAGATGGGCTTTGCTGGGTTATCAT  Raphanus sativus cv Rat-Tail Radish #3870
FD541135       <-- ..................................TTTGCTGGGTTATCAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV541434       --> AGTCCCAGGTGAGTTTATGTATAGATAGATGGGCTTTGCTGGGTTATCAT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD985875       --> AGTCCCAGGTGAGTTTATGTATAGATAGATGGGCTTTGCTGGGTTATCAT  Raphanus raphanistrum subsp. landra
FD944655       --> AGTCCCAGGTGAGTTTATGTATAGATAGATGGGCTTTGCTGGGTTATCAT  Raphanus sativus cv Early Scarlet Globe
FD974577       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV532828       --> AGTCCCAGGTGAGTTTATGTATAGGTAGATGGGCTTTGCTGGGTTATCAT  Raphanus raphanistrum subsp. maritimus
EV547182       --> AGTCCCAGGTGAGTTTATGTATAGATAGATGGGCTTTGCTGGGTTATCAT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD969735       --> AGTCCCAGGTGAGTTTATGTATAGATAGATGGGCTTTGCTGGGTTATCAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EW736381       --> AGTCCCAGGTGAGTTTATGTATAGGTAGATGGGCTTTGCTGGGTTATCAT  Raphanus sativus cv Rat-Tail Radish #3870

               751    -    801
UN21856        --> AGTCTAACCACATAAACTGTGCAACGAGTAACTCAGTAACTGCAGGTACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY439444       <-- AGTCTAACCACATAAACTGTGCAACGAGTAACTCAGTAACTGCAGGTACG  Raphanus sativus cv GSK3-1
FD965713       <-- AGTCTAACCACATAAACTGTGCAACGAGTAACTCAGTAACTGCAGGAACA  Raphanus raphanistrum subsp. maritimus
FY449912       <-- AGTCTAACCACATAAACTGTGCAACGAGTAACTCAGTAACTGCAGGTACG  Raphanus sativus cv GSK3-1
EV552229       <-- AGTCTAACCACATAAACTGTGCAACGAGTAACTCAGTAACTGCAGGAACA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV528972       <-- AGTCTAACCACATAAACTGTGCAACGAGTAACTCAGTAACTGCAGGAACA  Raphanus raphanistrum subsp. maritimus
FD948941       <-- AGTCTAACCACATAAACTGTGCAACGAGTAACTCAGTAACTGCAGGTACG  Raphanus sativus cv Early Scarlet Globe
EV567896       <-- AGTCTAACCACATAAACTGTGCAACGAGTAACTCAGTAACTGCAGGTACG  Raphanus raphanistrum subsp. landra
FD978304       <-- AGTCTAACCACATAAACTGTGCAACGAGTAACTCAGTAACTACAGGAACA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV537136       <-- AGTCTAACCACATAAACTGTGCAACGAGTAACTCAGTAACTGCAGGTACA  Raphanus raphanistrum subsp. raphanistrum (MS)
EW732010       <-- AGTCTAACCACATAAAATGTGCAACGAGTAACTCAGTAACTGCAGGAACA  Raphanus sativus cv Rat-Tail Radish #3870
EX757289       <-- AGTCTAACCACATAAACTGTGCAACGAGTAACTCAGTAACTGCAGGTACA  Raphanus raphanistrum subsp. raphanistrum (MS)
FY450503       <-- AGTCTAACCACATAAACTGTGCAACGAGTAACTCAGTAACTGCAGGTACG  Raphanus sativus cv GSK3-1
EW732438       <-- AGTCTAACCACATAAACTGTGCAACGAGTAACTCAGTAACTGCAGGTACG  Raphanus sativus cv Rat-Tail Radish #3870
FD541135       <-- AATCTAACCACATAAACTGTGCAACGAGTAACTCAGTAACTGCAGGTACA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV541434       --> AGTCTAACCACATAAACTGTGCAACGAGTAACTCAGTAACTGCAGGTACA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD985875       --> AGTCTAACCACATAAACTGTGCAACGAGTAACTCAGTAAC..........  Raphanus raphanistrum subsp. landra
FD944655       --> AGTCTAACCACATAAACTGTGCAACGAGTAACTCAGTAACTGCAGGTACG  Raphanus sativus cv Early Scarlet Globe
FD974577       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV532828       --> AGTCTAACCACATAAACTGTGCAACGAGTAACTCAGTAACTGCAGGAACA  Raphanus raphanistrum subsp. maritimus
EV547182       --> AGTCTAACCACATAAACTGTGCAACGAGTAACTCAGTAACTGCAGGAACA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD969735       --> AATCTAACCACATAAACTGTGCAACGAGTAACTCAGTAACTGCAGGTACA  Raphanus raphanistrum subsp. raphanistrum (MS)
EW736381       --> AGTCTAACCACATAAAATGTGCAACGAGTAACTCAGTAACTGCAGGAACA  Raphanus sativus cv Rat-Tail Radish #3870

               801    -    851
UN21856        --> ATAGGCATGCCAAGATAGCAGATCCTAGCATCCAAGAGCAAAGAAGGCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY439444       <-- ATAGGCATGCCAAGATAGCAAATCCTAGCATCCAAGAGCAAAGAAGGTAA  Raphanus sativus cv GSK3-1
FD965713       <-- ATAGGCATGCCAAGATAGCAGATCCTAGCATCCAAGAGCAAAGAAGGCAA  Raphanus raphanistrum subsp. maritimus
FY449912       <-- ATAGGCATGCCAAGATAGCAAATCCTAGCATCCAAGAGCAAAGAAGGTAA  Raphanus sativus cv GSK3-1
EV552229       <-- ATAGGCATGCCAAGATAGCAGATCCTAGCATCCAAGAGCAAAGAAGGCAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV528972       <-- ATAGGCATGCCAAGATAGCAGATCCTAGCATCCAAGAGCAAAGAAGGCAA  Raphanus raphanistrum subsp. maritimus
FD948941       <-- ATAGGCATGCCAAGATAGCAAATCCTAGCATCCAAGAGCAAAGAAGGCAA  Raphanus sativus cv Early Scarlet Globe
EV567896       <-- ATAGGCATGCCAAGATAGCAAATCCTAGCATCCAAGAGCAAAGAAGGCAA  Raphanus raphanistrum subsp. landra
FD978304       <-- ATAGGCATGCCAAGATAGCAGATCCTAGCATCCAAGAGCAAAGAAGACAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV537136       <-- ATAGGCATGCCAAGATAGCAGATCCTAGCATCCAAGAGCAAAGAAGGCAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EW732010       <-- ATAGGCATGCCAAGATAGCAGATCCTAGCATCCAAGAGCAAAGAAGGCAA  Raphanus sativus cv Rat-Tail Radish #3870
EX757289       <-- ATAGGCATGCCAAGATAGCAGATCCTAGCATCCAAGAGCAAAGAAGGCAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FY450503       <-- ATAGGCATGCCAAGATAGCAAATCCTAGCATCCAAGAGCAAAGAAGGTAA  Raphanus sativus cv GSK3-1
EW732438       <-- ATAGGCATGCCAAGATAGCAAATC-TAGCATCCAAGAGCAAAGAAGGTAA  Raphanus sativus cv Rat-Tail Radish #3870
FD541135       <-- ATAGGCATGCCAAGGTAGCAGATCCTAGCATCCAAGAGCAAAGAAGGCAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV541434       --> ATAGGCATGCCAAGATAGCAGATCCTAGCATCCAAGAGCAAA........  Raphanus raphanistrum subsp. raphanistrum (MS)
FD985875       --> ..................................................  Raphanus raphanistrum subsp. landra
FD944655       --> ATAGGCATGCCAAGATAGCAAATCCTAGCATCCAAGAGCAA.........  Raphanus sativus cv Early Scarlet Globe
FD974577       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV532828       --> ATAGGCATGCCAAGATAGCAGATCCTAGCATCCAAGAGCAAAGAAGGCAA  Raphanus raphanistrum subsp. maritimus
EV547182       --> ATAGGCATGCCAAGATAGCAGA............................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD969735       --> ATAGGCATGCCAAGGTAGCAGA............................  Raphanus raphanistrum subsp. raphanistrum (MS)
EW736381       --> ATAGGCATGCCAAGATAGCAGATCCTAGCATCCAAGAGCAAAG.......  Raphanus sativus cv Rat-Tail Radish #3870

               851    -    901
UN21856        --> ATCTGGAGGAGCAGTTCTTGGTCTTGCAGATCCTCCACCGCCGCCTCCTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY439444       <-- ATCTGGAGGAGCAGTTCTTGGTCTTGCAGATCCTCCACCGCCGCCTCCTC
FD965713       <-- ATCTGGAGGAGCAGTTCTTGGTCTTGCAGATCCTCCACCGCCGCCTCCTC
FY449912       <-- ATCTGGAGGAGCAGTTCTTGGTCTTGCAGATCCTCCACCGCCGCCTCCTC
EV552229       <-- ATCTGGAGGAGCAGTTCTTGGTCTTGCAGATCCTCCACCGCCGCCTCCTC
EV528972       <-- ATCTGGAGGAGCAGTTCTTGGTCTTGCAGATCCTCCACCGCCGCCTCCTC
FD948941       <-- ATCTGGAGGAGCAGTTCTTGGTCTTGCAGATCCTCCACCTCCGCCTCCTC
EV567896       <-- ATCTGGAGGAGCAGTTCTTGGTCTTGCAGATCCTCCACCGCCGCCTCCTC
FD978304       <-- ATCTGGAGGAGCAGTTCTTGGTCTTGCAGATCCTCCACCGCCGCCTCCTC
EV537136       <-- ATCTGGAGGAGCAGTTCTTGGTCTCGGAGATCCTCCACCGCCGCCTCCTC
EW732010       <-- ATCTGGAGGAGCAGTTCTTGGTCTTGCAGATCCTCCACTGCCGCCTCCTC
EX757289       <-- ATCTGGAGGAGCAGTTCTTGGTCTCGGAGATCCTCCACCGCCGCCTCCTC
FY450503       <-- ATCTGGAGGAGCAGTTCTTGGTCTTGCAGATCCTCCACCGCCGCCTCCTC
EW732438       <-- ATCTGGAGGAGCAGTTCTTGGTCTTGCAGATCCTCCACCGCCGCCTCCTC
FD541135       <-- ATCTGGGGGAGCAGTTCTTGGTCTTGCAGATCCTCCACCGCCTCCTCTTC
EV541434       --> ..................................................
FD985875       --> ..................................................
FD944655       --> ..................................................
FD974577       --> ..................................................
EV532828       --> ATCTGGAGGAGCAGTTCTTGGTCTTGCAGATCCTCCACCGCCGCCTCCTC
EV547182       --> ..................................................
FD969735       --> ..................................................
EW736381       --> ..................................................

               901    -    951
UN21856        --> CACCTCTGTACATTTGGACACTCATGCTATATCTTCTAGGATCTGCTACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY439444       <-- CACCTCTGTACATTTGGACACTCATGCTATATCTTCTAGGATCTGCTACA
FD965713       <-- CACCTCTGTACATTTGGACACTCATGATATATCTTCTAGGATCTGCTACA
FY449912       <-- CACCTCTGTACATTTGGACACTCATGCTATATCTTCTAGGATCTGCTACA
EV552229       <-- CACCTCTGTACATTTGGACACTCATGCTATATCTTCTAGGATCTGCTACA
EV528972       <-- CACCTCTGTACATTTGGACACTCATGCTATATCTTCTAGGATCTGCTACA
FD948941       <-- CACCTCTGTACATTTGGACACTCATGCTATATCTTCTAGGATCTGCTACA
EV567896       <-- CACCTCTGTACATTTGGACACTCATGCTATATCTTCTAGGATCTGCTACA
FD978304       <-- CACCTCTGTACATTTGGACACTCATGCTATATCTTCTAGGATCTGCTACA
EV537136       <-- CACCTCTGTACATTTGGACACTCATCCTATATCTTCTAGGATCTGCTACA
EW732010       <-- CACCTCTGTACATTTGGACACTCATGCTATATCTTCTAGGATCTGCTACA
EX757289       <-- CACCTCTGTACATTTGGACACTCATCCTATATCTTCTAGGATCTGCTACA
FY450503       <-- CACCTCTGTACATTTGGACACTCATGCTATATCTTCTAGGATCTGCTACA
EW732438       <-- CACCTCTGTACATTTGGACACTCATGCTATATCTTCTAGGATCTACTACA
FD541135       <-- CACCTCTGTACATTTGGACACTCATGCTATATCTTCTAGGATCTGCTGCG
EV541434       --> ..................................................
FD985875       --> ..................................................
FD944655       --> ..................................................
FD974577       --> ..................................................
EV532828       --> CACCTCTGTACATTTGGACACTCATGCTATATCTTCTAGGATCTGCTACA
EV547182       --> ..................................................
FD969735       --> ..................................................
EW736381       --> ..................................................

               951    -   1001
UN21856        --> TTCATACCAGACATACTCCATGTCCCTCCATTGTCTAAATAATTTCTTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY439444       <-- TTCATACCAGACATACTCCATGTCCCTCCATTGTCTAAATAATTTCTTCT
FD965713       <-- TTCATACCAGACATACTCCATGTCCCTCCATTGTCTAAATAATTTCTTCT
FY449912       <-- TTCATACCAGACATACTCCATGTCCCTCCATTGTCTAAATAATTTCTTCT
EV552229       <-- TTCATACCAGACATACTCCATGTCCCTCCATTGTCTAAATAATTTCTTCT
EV528972       <-- TTCATACCAGACATACTCCATGTCCCTCCATTGTCTAAATAATTTCTTCT
FD948941       <-- TTCATACCAGACATACTCCATGTCCCTCCATTGTCTAAATAATTTCTTCT
EV567896       <-- TTCATACCAGACATACTCCATGTCCCTCCATTGTCTAAATAATTTCTTCT
FD978304       <-- TTCATACCAGACATACTCCATGTCCCTCCATTGTCTAAATAATTTCTTCT
EV537136       <-- TTCATACCAGACATACTCCATGTCCCTCCATTGTCTAAATAATTTCTTCT
EW732010       <-- TTCATACCAGACATACTCCATGTCCCTCCATTGTCTAAATAATTTCTTCT
EX757289       <-- TTCATACCAGACATACTCCATGTCCCTCCATTGTCTAAATAATTTCTTCT
FY450503       <-- TTCATACCAGACATACTCCATGTCCCTCCATTGTCTAAATAATTTCTTCT
EW732438       <-- TTCATACCAGACATACTCCATGTCCCTCCATTGTCTAAATAATTTCTTCT
FD541135       <-- TTCATACCAGACATACTCCATGTCCCTCCGTTGTCTAAATAATTTCTTCT
EV541434       --> ..................................................
FD985875       --> ..................................................
FD944655       --> ..................................................
FD974577       --> ..................................................
EV532828       --> TTCATACCAGACATACTCCATGTCCCT.......................
EV547182       --> ..................................................
FD969735       --> ..................................................
EW736381       --> ..................................................

               1001   -   1051
UN21856        --> AGACGAGATGCTTTCCTCAGTAACTTTTTCCGCTTGCCTACGGACAGGGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY439444       <-- AGACGAGATGCTTTCCTCTGTAACTTTTTCCGCTTGCCTACGGACAGGGC  Raphanus sativus cv GSK3-1
FD965713       <-- AGACGAGATGCTTTCCTCAGTAACTTTTTCCGCTTGCCTACGGACAGGGC  Raphanus raphanistrum subsp. maritimus
FY449912       <-- AGACGAGATGCTTTCCTCTGTAACTTTTTCCGCTTGCCTACGGACAGGGC  Raphanus sativus cv GSK3-1
EV552229       <-- AGACGAGATGCTTTCCTCAGTAACTTTTTCCGCTTGCCTACGGACAGGGC  Raphanus raphanistrum subsp. raphanistrum (NY)
EV528972       <-- AGACGAGATGCTTTCCTCAGTAACTTTTTCCGCTTGCCTACGGACAGGGC  Raphanus raphanistrum subsp. maritimus
FD948941       <-- AGACGAGATGCTTTCCTCGGTAACTTTTTCCGCTTGCCTACGGACAGGGC  Raphanus sativus cv Early Scarlet Globe
EV567896       <-- AGACGAGATGCTTTCCTCGGTAACTTTTTCCGCTTGCCTACGGACAGGGC  Raphanus raphanistrum subsp. landra
FD978304       <-- AGACGAGATGCTTTCCTCAGTAACTTTTTCCGCTTGCCTACGGACAGGGC  Raphanus raphanistrum subsp. raphanistrum (NY)
EV537136       <-- AGACGAGATGCTTTCCTCAGTAACTTTTTCCGCTTGCCTACGGACAGGGC  Raphanus raphanistrum subsp. raphanistrum (MS)
EW732010       <-- AGACGAGATGCTTTCCTCGGTAACTTTTTCCGCTTGCCTACGGACAGGGC  Raphanus sativus cv Rat-Tail Radish #3870
EX757289       <-- AGACGAGATGCTTTCCTCAGTAACTTTTTCCGCTTGCCTACGGACAGGGC  Raphanus raphanistrum subsp. raphanistrum (MS)
FY450503       <-- AGACGAGATGCTTTCCTCTGTAACTTTTTCCGCTTGCCTACGGACAGGGC  Raphanus sativus cv GSK3-1
EW732438       <-- AGACGAGATGCTTTCCTCTGTAACTTTTTCCGCTTGCCTACGGACAGGGC  Raphanus sativus cv Rat-Tail Radish #3870
FD541135       <-- AGACGAGATGCTTTCCTCAGTAACTTTTTCCGCTTGCCTACGGACAGGGC  Raphanus raphanistrum subsp. raphanistrum (MS)
EV541434       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD985875       --> ..................................................  Raphanus raphanistrum subsp. landra
FD944655       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD974577       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV532828       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EV547182       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD969735       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EW736381       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870

               1051   -   1101
UN21856        --> TATCCTCGGTCATGAACATATCCATTTGAGCTGGATTAAGCCCGTAGAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY439444       <-- TATCCTCGGTCATGAAC.................................  Raphanus sativus cv GSK3-1
FD965713       <-- TATCCTCGGTCATGAACc................................  Raphanus raphanistrum subsp. maritimus
FY449912       <-- TATCCTCGGTCATGAACATATCCATTTGAGCTGGATTAAGCCCGTAGAAG  Raphanus sativus cv GSK3-1
EV552229       <-- TATCCTCGGTCATGAACATATCCATTTGAGCTGGGTTAAGCCCGTAGAAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EV528972       <-- TATCCTCGGTCATGAACATATCCATTTGAGCTGGGTTAAGCCCGTAGAAG  Raphanus raphanistrum subsp. maritimus
FD948941       <-- TATCCTCGGTCATGAACATATCCATTTGAGCTGGATTAAGCCCGTAGAAG  Raphanus sativus cv Early Scarlet Globe
EV567896       <-- TATCCTCGGTCATGAACATATCCATTTGAGCTGGGTTAAGCCCGTAGAAG  Raphanus raphanistrum subsp. landra
FD978304       <-- TATCCTCGGTCATGAACATATCCATTTGAGCTGGGTTAAGCCCGTAGAAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EV537136       <-- TATCCTCGGTCATGAACATATCCATTTGAGCTGGATTAAGCCCGTAGAAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EW732010       <-- TATCCTCGGTCATGAACATATCCATTTGAGCTGGGTTAAGCCCGTAGAAG  Raphanus sativus cv Rat-Tail Radish #3870
EX757289       <-- TATCCTCGGTCATGAACATATCCATTTGAGCTGGATTAAGCCCGTAGAAG  Raphanus raphanistrum subsp. raphanistrum (MS)
FY450503       <-- TATCCTCGGTCATGAACATATCCATTTGAGCTGGATTAAGCCCGTAGAAG  Raphanus sativus cv GSK3-1
EW732438       <-- TATCCTCGGTCATGAACATATCCATTTGAGCTGGATTAAGCCCGTAGAAG  Raphanus sativus cv Rat-Tail Radish #3870
FD541135       <-- TATCCTCGGTCATGAACATATCCATTTGAGCTGGATTAAGCCCGTAGAAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV541434       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD985875       --> ..................................................  Raphanus raphanistrum subsp. landra
FD944655       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD974577       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV532828       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EV547182       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD969735       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EW736381       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870

               1101   -   1151
UN21856        --> TATTGCGGTACATTCTTGAAGTTTTGCATCACTCCATCTTTGAGATTGTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY439444       <-- ..................................................
FD965713       <-- ..................................................
FY449912       <-- TATTGCGGTACATTCTTGAAGTTTTGCATCACTCCATCTTTGAGATTGTC
EV552229       <-- TATTGCGGTACATTCTTGAAGTTTTGCATCACTCCATCTTTGAGATTGTC
EV528972       <-- TATTGCGGTACATTCTTGAAGTTTTGCATCACTCCGTCTTTGGGATTGTC
FD948941       <-- TATTGCGGTACATTCTTGAAGTTTTGCATCACTCCATCTTTGAGATTGTC
EV567896       <-- TATTGCGGTACATTCTTGAAGTTTTGCATCACTCCGTCTTTGAGATTGTC
FD978304       <-- TATTGCGGTACATTCTTGAAGTTTTGCATCACTCCATCTTTGAGATTGTC
EV537136       <-- TATTGCGGTACATTCTTGAAGTTTTGCATCACTCCATCTTTGAGGTTGTC
EW732010       <-- TATTGCGGTACATTCTTGAAGTTTTGCATCACTCCGTCTTTGAGATTGTC
EX757289       <-- TATTGCGGTACATTCTTGAAGTTTTGCATCACTCCATCTTTGAGGTTGTC
FY450503       <-- TATTGCGGTACATTCTTGAAGTTTTGCATCACTCCATCTTTGAGATTGTC
EW732438       <-- TATTGCGGTACATTCTTGAAGTTTTGCATCACTCCATCTTTGAGATTGTC
FD541135       <-- TATTGCGGTACATTCTTGAAGTTTTGCATCACTCCATCTTTGAGATTGTC
EV541434       --> ..................................................
FD985875       --> ..................................................
FD944655       --> ..................................................
FD974577       --> ..................................................
EV532828       --> ..................................................
EV547182       --> ..................................................
FD969735       --> ..................................................
EW736381       --> ..................................................

               1151   -   1201
UN21856        --> TCCTCGAAACTGCTTGGGGATGTGGTCAAAGCTCATGTTTTTAGCAGAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY439444       <-- ..................................................  Raphanus sativus cv GSK3-1
FD965713       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FY449912       <-- TCCTCGAAACTGCTTGGGGATGTGGTCAAAGCTCATGTTTTTGGCAGAAG  Raphanus sativus cv GSK3-1
EV552229       <-- TCCTCGAAACTGCTTGGGGATGTGGTCAAAGCTCATGTTTTTGGCAGAAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EV528972       <-- TCCTCGAAACTGCTTGGGGATGTGGTCAAAGCTCATGTTTTTAGCAGAAG  Raphanus raphanistrum subsp. maritimus
FD948941       <-- TCCTCGAAACTGCTTGGGGATGTGGTCAAAGCTCATGTTTTTAGCAGAAG  Raphanus sativus cv Early Scarlet Globe
EV567896       <-- TCCTTGAAACTGCTTGGGGATGTGGTCAAAGCTCATGTTTTTAGCAGAAG  Raphanus raphanistrum subsp. landra
FD978304       <-- TCCTCGAAACTGCTTGGGGATGTGGTCAAAGCTCATGTTTTTGGCAGAAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EV537136       <-- TCCTCGAAACTGCTTGGGGATGTGGTCAAAGCTCATGTTTTTAGCAGAAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EW732010       <-- TCCTCGAAACTGCTTGGGGATGTGGTCAAAGCTCATGTTTTTAGCAGAAG  Raphanus sativus cv Rat-Tail Radish #3870
EX757289       <-- TCCTCGAAACTGCTTGGGGATGTGGTCAAAGCTCATGTTTTTAGCAGAAG  Raphanus raphanistrum subsp. raphanistrum (MS)
FY450503       <-- TCCTCGAAACTGCTTGGGGATGTGGTCAAAGCTCATGTTTTTGGCAGAAG  Raphanus sativus cv GSK3-1
EW732438       <-- TCCTCGAAACTGCTTGGGGATGTGGTCAAAGCTCATGTTTTTGGCAGAAG  Raphanus sativus cv Rat-Tail Radish #3870
FD541135       <-- TCCTCGAAACTGCTTGGGGATGTGGTCAAAGCTCATGTTTTTAGCAGAAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EV541434       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD985875       --> ..................................................  Raphanus raphanistrum subsp. landra
FD944655       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD974577       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV532828       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EV547182       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD969735       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EW736381       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870

               1201   -   1251
UN21856        --> CGAAGCAGTGTGATCTTCTTGTGCGTTGAGGGACAGTAGAGCAAGGCATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY439444       <-- ..................................................
FD965713       <-- ..................................................
FY449912       <-- CGAAGCAGTGTGATCTTCTTGTGCGTTGAGGGACAGTAGAGCAAGGCATG
EV552229       <-- CGAAGCAGTGTGATCTTCTTGTGCGTTGAGGGACAGTAGAGCAAGGCATG
EV528972       <-- CGAAGCAGTGTGATCTTCTTGTGCGTTGAGGGACAGAAGAGCAAGGCATG
FD948941       <-- CAAAGCAGTGTGATCTTCTTGTGCGTCGAGGGACAGAAGAGCAAGGCATG
EV567896       <-- CGAAGCAGTGTGATCTTCTTGTGCGTTGAGGGACAGAAGAGCAAGGCATG
FD978304       <-- CGAAGCAGTGTGATCTTCTTGTGCGTTGAGGGACAGTAGAGCAAGGCATG
EV537136       <-- CGAAGCAGTGTGATCTTCTTGTGCGTTGAGGAACAGTAGAGCAAGGCATG
EW732010       <-- CGAAGCAGTGTGATCTTCTTGTGCGTTGAGGGACAGAAGAGCAAGGCATG
EX757289       <-- CGAATCAGTGTGATCTTCTTGTGCGTTGAGGAACAGTAGAGCAAGGCATG
FY450503       <-- CGAAGCAGTGTGATCTTCTTGTGCGTTGAGGGACAGTAGAGCAAGGCATG
EW732438       <-- CGAAGCAGTGTGATCTTCTTGTGCGTTGAGGGACAGTAGAGCAAGGCATG
FD541135       <-- CGAAGCAGTGTGATCTTCTTGTGCGTTGAGGGACAGAAGAGCAAGGCATG
EV541434       --> ..................................................
FD985875       --> ..................................................
FD944655       --> ..................................................
FD974577       --> ..................................................
EV532828       --> ..................................................
EV547182       --> ..................................................
FD969735       --> ..................................................
EW736381       --> ..................................................

               1251   -   1301
UN21856        --> TTCGAGGAGAAGAGCTTAGTAGATCCCGACATGAAGGGTGAGTTGCGAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY439444       <-- ..................................................
FD965713       <-- ..................................................
FY449912       <-- TTCGAGGAGAAGAGCTTAGTAGATCCCGACATGAAGGGTGAGTTGCGAAG
EV552229       <-- TTCGAGGAGAAGAGCTTAGTAGATCCCGACATGAAGGGTGAGTTGCGAAG
EV528972       <-- TTCGAGGAGAAGAGCTTAGTAGATCCCGACATGAAGGGTGAGTTGCGAAG
FD948941       <-- TTCGAGGAGAAGAGCTTAGTAGATCCCGACATGAAGGGTGAGTTGCGAAG
EV567896       <-- TTCGAGGAGAAGAGCTTAGTAGATCCCGACATGAAGGGTGAGTTGCGAAG
FD978304       <-- TTCGAGGAGAAGAGCTTAGTAGATCCCGACATGAAGGGTGAGTTGCGAAG
EV537136       <-- TTCGAGGAGAAGAGCTTAGTAGATCCCGACATGAAGGGTGATTTGCGAAG
EW732010       <-- TTCGAGGAGAAGAGCTTAGTAGATCCCGACATGAAGGGTGAGTTGCGAAG
EX757289       <-- TTCGAGGAGAAGAGCTTAGTAGATCCCGACATGAAGGGTGATTTGCGAAG
FY450503       <-- TTCGAGGAGAAGAGCTTAGTAGATCCCGACATGAAGGGTGAGTTGCGAAG
EW732438       <-- TTCGAGGAGAAGAGCTTAGTAGATCCCGACATGAAGGGTGAGTTGCGAAG
FD541135       <-- TTCGAGGAGAAGAGCTTAGTACATCCCGACATGAAGGGTGAGTTGCGAAG
EV541434       --> ..................................................
FD985875       --> ..................................................
FD944655       --> ..................................................
FD974577       --> ..................................................
EV532828       --> ..................................................
EV547182       --> ..................................................
FD969735       --> ..................................................
EW736381       --> ..................................................

               1301   -   1351
UN21856        --> CACAGACTTGGAACAGAGAGCTTCGTTGTTGAGTTGTGAAGTAAGAGGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY439444       <-- ..................................................  Raphanus sativus cv GSK3-1
FD965713       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FY449912       <-- CACAGACT-GGAACAGAGAGCTTCGTTGTTGAGTgag.............  Raphanus sativus cv GSK3-1
EV552229       <-- CACAGACTTGGAACAGAGAGCTTCGTTGTTGAGTTGAGAAGTAAGAGGAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EV528972       <-- CACAGACTTGGAACAGAGAGCTTCGTTGTTGAGATGTGGAGTAAGAGGAG  Raphanus raphanistrum subsp. maritimus
FD948941       <-- CACAGACTTGGAACAGAGAGCTTCGTTGTTGAGTTGTGAAGTAAGAGGAG  Raphanus sativus cv Early Scarlet Globe
EV567896       <-- CACAGACTTGGAACAGAGAGCTTCGTTGTTGAGCTGTGGAGTAAGAGGAG  Raphanus raphanistrum subsp. landra
FD978304       <-- CACAGACTTGGAACAGAGAGCTTCGTTGTTGAGTTGAGAAGTAAGAGGAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EV537136       <-- CACAGACTTGGAACATAGAGCTTCGTGGTTGAGTTGTGAAGTAAGAGGAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EW732010       <-- CACAGACTTGGAACAGAGAGCTTCGTTGTTGAGCTGTGGAGTAAGAGGAG  Raphanus sativus cv Rat-Tail Radish #3870
EX757289       <-- CACAGACTTGGAACATAGAGCTTCGTGGTTGAGTTGTGAAGTAAGAGGAG  Raphanus raphanistrum subsp. raphanistrum (MS)
FY450503       <-- CACAGACTTGGAACAGAGAGCTTCGTTGTTGAGTTGAGAAGTAAGAGGAG  Raphanus sativus cv GSK3-1
EW732438       <-- CACAGACTTGGAACAGAGAGCTTCGTTGTTGAGTTGAGAAGTAAGAGGAG  Raphanus sativus cv Rat-Tail Radish #3870
FD541135       <-- CACTGACTTCGAACATAGAGCTTCGTGGTTGAGTTGTGAAGTAAGAGGAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EV541434       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD985875       --> ..................................................  Raphanus raphanistrum subsp. landra
FD944655       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD974577       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV532828       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EV547182       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD969735       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EW736381       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870

               1351   -   1401
UN21856        --> AGACCATAGAAGTCGCCATCTCCGATTTGGCAACCGATGAAGAGGATGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY439444       <-- ..................................................
FD965713       <-- ..................................................
FY449912       <-- ..................................................
EV552229       <-- AGACCATAGAAGTCGCCATCTCCcc.........................
EV528972       <-- AGACCATAGAAGTCGCCATCTCCGATTTGGCAACCGATGAAGAAGGTGAA
FD948941       <-- AGACCATAGAAGTCGCCATCTCCcc.........................
EV567896       <-- AGACCATAGAAGTCGCCATCTCCGATTTGGCAACCGATGAAGAaggtcc.
FD978304       <-- AGACCATAGAAGTCGCCATCTCCcc.........................
EV537136       <-- AGGCCATAGAACTCGCCATCTCCGATTTGGCAACCGATGAAGTAGATGAA
EW732010       <-- AGACCATAGAAGTCGCCATCTCCGATTTGGCAACCGATGAAGAAGGTGAA
EX757289       <-- AGGCCATAGAACTCGCCATCTCCGATTTGGCAACCGATGAAGTAGATGAA
FY450503       <-- AGACCATAGAAGTCGCCATCTCCGATTTGGCGACCGATGAAGAGGATGAA
EW732438       <-- AGACCATAGAAGTCGCCATCTCCGATTTGGCGACCGATGAAGAGGATGAA
FD541135       <-- AGACCATAGAAGTCGCCATCTCCGATTTGGCAACCGATGAAGAAGATcc.
EV541434       --> ..................................................
FD985875       --> ..................................................
FD944655       --> ..................................................
FD974577       --> ..................................................
EV532828       --> ..................................................
EV547182       --> ..................................................
FD969735       --> ..................................................
EW736381       --> ..................................................

               1401   -   1451
UN21856        --> GATTTAAACGACCAAGGATTGGGTTTTTGAGGCGAAATTAGGGATTGCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY439444       <-- ..................................................
FD965713       <-- ..................................................
FY449912       <-- ..................................................
EV552229       <-- ..................................................
EV528972       <-- GATTTtc...........................................
FD948941       <-- ..................................................
EV567896       <-- ..................................................
FD978304       <-- ..................................................
EV537136       <-- GATCTAGACGACCAAGGATTGGGTTTTTGAGGCCAAATTAGGGATTGCTT
EW732010       <-- GATTTTAACGACCAAGGATTG.............................
EX757289       <-- GATCTAGACGACCAAGGATTGGGTTTTTGAG...................
FY450503       <-- GATTaaac..........................................
EW732438       <-- GATTTAAACGATCAGGGATTGGCTTTTTGAGGCGAAATTAGGGATTGCTT
FD541135       <-- ..................................................
EV541434       --> ..................................................
FD985875       --> ..................................................
FD944655       --> ..................................................
FD974577       --> ..................................................
EV532828       --> ..................................................
EV547182       --> ..................................................
FD969735       --> ..................................................
EW736381       --> ..................................................

               1451   -   1501
UN21856        --> GTCACTTCTTCTTCTGCTGTCGTCAGATGAAGATGTGCAGTCCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY439444       <-- ............................................
FD965713       <-- ............................................
FY449912       <-- ............................................
EV552229       <-- ............................................
EV528972       <-- ............................................
FD948941       <-- ............................................
EV567896       <-- ............................................
FD978304       <-- ............................................
EV537136       <-- GTCcc.......................................
EW732010       <-- ............................................
EX757289       <-- ............................................
FY450503       <-- ............................................
EW732438       <-- GTCACTTCTTCTTCTGCTGTCGTCAGATGAAGATGTGCAGTCCC
FD541135       <-- ............................................
EV541434       --> ............................................
FD985875       --> ............................................
FD944655       --> ............................................
FD974577       --> ............................................
EV532828       --> ............................................
EV547182       --> ............................................
FD969735       --> ............................................
EW736381       --> ............................................