Library    |     Search    |     Batch query    |     SNP    |     SSR  

Alignment for radish unigene UN21859

               1      -     51
UN21859        --> GGCTCACACGCTCTGTCTTCTCCCTTCTGGTTGGATTAGATATTTAGGGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW737948       <-- ..................................................
EY909908       <-- ..................................................
FD944465       <-- ..................................................
EX758625       <-- ..................................................
FD961172       <-- ..................................................
FD575586       <-- ..................................................
EW737879       <-- ..................................................
EX754261       --> GGCTCACACGCTCTGTCTTCTCCCTTCTGGTCGGATTAGATATTTAGGGC
EW733426       --> ...TCACACGCTCTGTCTTCTTCCTCTTCGTTAGATTAGATATTTAGGGC
FD948716       --> ..................................................
FD965429       --> ..................................................
EW733256       --> ..................................................
FD970442       --> ..................................................
FY442631       --> ..................................................
FD571822       --> ..................................................

               51     -    101
UN21859        --> TTTGAAGCCGAACGCTTGAAGCTA-CTAAAATCGAGCAAAAAAAAAATGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW737948       <-- ...............................cCGAGCAAAAAAAAAATGG
EY909908       <-- ..................................................
FD944465       <-- ..................................................
EX758625       <-- ..................................................
FD961172       <-- ..................................................
FD575586       <-- ..................................................
EW737879       <-- ..................................................
EX754261       --> TTTGAAGCCGAACGCCTGAAGCTA-CTAAAATCGAGCAAAAAAAAA-TGG
EW733426       --> TTCGAAGCCGAACGCTTGAAGCTAACCAAAACCGAGCAAAAAAAAAATGG
FD948716       --> ...............................ggGAGCAAAAAAAAAATGG
FD965429       --> .................................GAGCAAAAAAAAGATGG
EW733256       --> ..................................................
FD970442       --> ..................................................
FY442631       --> ..................................................
FD571822       --> ..................................................

               101    -    151
UN21859        --> AGATAGCGGAGCGTAGGGAGGAGGAGATCAGAGAATCGGGAAACATGGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW737948       <-- AGATAGCGGAGCGTAGGGAGGAGGAGATCAGAGAATCAGGAAACATGGAG
EY909908       <-- ..................................................
FD944465       <-- ..................................................
EX758625       <-- ..................................................
FD961172       <-- ..................................................
FD575586       <-- ..................................................
EW737879       <-- ..................................................
EX754261       --> AGATAGCGGAGCGTAGGGAGGAGGAGATCAGAGAATCGGGAAACATGGAG
EW733426       --> AGATAGCGGAGCGTAGGGAGGAGGAGATCAGAGAATCAGGAAACATGGAG
FD948716       --> AGATAGCGGATCGTAGGGAGGAGGAGATCATAGAATCGGGAAACATGGAG
FD965429       --> AGATTGCGGAGCGTAGGGATGAGGAGATCAGAGAATCGGGAAACATGGAG
EW733256       --> ...............................AGAATCAGGAAACATGGAG
FD970442       --> ..................................................
FY442631       --> ..................................................
FD571822       --> ..................................................

               151    -    201
UN21859        --> AACATAAAGTCAGACTCTTTTTCCGATGAACGCTACTCTCGCGACCTCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW737948       <-- AACATAAAGTCAGACACTTTTTCCGATGAACGCTACTCTCGCGACCTCAA
EY909908       <-- ..................................................
FD944465       <-- ..................................................
EX758625       <-- ..................................................
FD961172       <-- ..................................................
FD575586       <-- ..................................................
EW737879       <-- ..................................................
EX754261       --> AACATCAAGTCAGACTCTTTTTCCGATGAACGCTACTCTCGCGACCTTAA
EW733426       --> AACATAAAGTCAGACACTTTTTCCGATGAACGCTACTCTCGCGACCTCAA
FD948716       --> AACATCAAGTCCGACTCTTTTACCGATGAACGCTACTCTCGCGACCTCAA
FD965429       --> AACATAAAGTCCGACTCTTTTTCCGATGAACGCTACTCTCGCGACCGCAA
EW733256       --> AACATAAAGTCAGACACTTTTTCCGATGAACGCTACTCTCGCGACCTCAA
FD970442       --> ..................................................
FY442631       --> ..................................................
FD571822       --> ..................................................

               201    -    251
UN21859        --> AGCTGGTCTTCATCCTCTTCGGTACAAGTTTGCGATTTGGTACACACGTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW737948       <-- AGCTGGTCTCCATCCTCTACGGTACAAGTTTGCGATTTGGTACACACGTC
EY909908       <-- ......................TACAAGTTTGCGATTTGGTACACACGTC
FD944465       <-- ..................................................
EX758625       <-- ..................................................
FD961172       <-- ..................................................
FD575586       <-- ..................................................
EW737879       <-- ..................................................
EX754261       --> AGCTGGTCCTCATCCTCTTCGGTACAAGTTTGCGATTTGGTACACACGTC
EW733426       --> AGCTGGTCTCCATCCTCTACGGTACAAGTTTGCGATTTGGTACACACGTC
FD948716       --> AGCTGGTCTTCATCCTCTTCGGTACAAGTTTGCGATTTGGTACACACGTC
FD965429       --> AGCTGGTCTTCATCCTCTTCGGTACAAGTTTGCGATTTGGTACACACGTC
EW733256       --> AGCTGGTCTCCATCCTCTACGGTACAAGTTTGCGATTTGGTACACACGTC
FD970442       --> ..................................................
FY442631       --> ..................................................
FD571822       --> ..................................................

               251    -    301
UN21859        --> GGACACCAGGGGTGAGGAGCCAGACATCTTATGAGGATAACATTAAGAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW737948       <-- GGACACCAGGGGTCAGGAGCCAGACATCTTATGAGGATAACATTAAGAAG
EY909908       <-- GGACACCAGGGGTAAGGAGCCAGACATCTTATGAGGATAACATTAAGAAG
FD944465       <-- ..................GCCAGACATCTTATGAGGATAACATTAAGAAG
EX758625       <-- ..................................................
FD961172       <-- ..................................................
FD575586       <-- ..................................................
EW737879       <-- ..................................................
EX754261       --> GCACACCAGGGGTGAGAAGCCAGACATCTTATGAGGATAACATTAAGAAG
EW733426       --> GGACACCAGGGGTCAGGAGCCAGACATCTTATGAGGATAACATTAAGAAG
FD948716       --> GGACACCAGGGGTAAGGAGCCAGACATCTTATGAGGATAACATTAAGAAG
FD965429       --> GCACACCAGGGGTGAGGAGCCAGACATCTTATGAGGATAACATTAAGAAG
EW733256       --> GGACACCAGGGGTCAGGAGCCAGACATCTTATGAGGATAACATTAAGAAG
FD970442       --> .GACACCAGGGGTGAGAAGCCAGACATCTTATGAGGATAACATTAAGAAG
FY442631       --> ..................................................
FD571822       --> ..................................................

               301    -    351
UN21859        --> ATTGTTGATTTCAGCACGGTGGAAGGGTTTTGGGCATGCTACTGTCACCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW737948       <-- ATTGTTGATTTCAGCACGGTGGAAGGGTTTTGGGCATGCTACTGTCACCT
EY909908       <-- ATTGTTGATTTCAGCACGGTGGAAGGGTTTTGGGCATGCTACTGTCACCT
FD944465       <-- ATTGTTGATTTCAGCACGGTGGAAGGGTTTTGGGCATGCTACTGTCACCT
EX758625       <-- ..................................................
FD961172       <-- ..................................................
FD575586       <-- ..................................................
EW737879       <-- ..................................................
EX754261       --> ATTGTTGATTTCAGCACGGTGGAAGGGTTTTGGGCATGCTACTGTCACCT
EW733426       --> ATTGTTGATTTCAGCACGGTGGAAGGGTTTTGGGCATGCTACTGTCACCT
FD948716       --> ATTGTTGATTTCAGCACGGTGGAAGGGTTTTGGGCATGCTACTGTCACCT
FD965429       --> ATTGTTGATTTCAGCACGGTGGAAGGGTTTTGGGCATGCTACTGTCACCT
EW733256       --> ATTGTTGATTTCAGCACGGTGGAAGGGTTTTGGGCATGCTACTGTCACCT
FD970442       --> ATTGTTGATTTCAGCACGGTGGAAGGGTTTTGGGCATGCTACTGTCACCT
FY442631       --> .TTGTTGATTTCAGCACGGTGGAAGGATTTTGGGCATGCTACTGTCACCT
FD571822       --> ..................................................

               351    -    401
UN21859        --> AGCTCGTTCTTCTCTCTTGCCTAGTCCTACTGATCTTCATTTCTTCAAGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW737948       <-- AGCTCGTTCTTCTCTCTTGCCTAGTCCTACTGATCTTCATTTCTTCAAGG
EY909908       <-- AGCTCGTTCTTCTCTCCTGCCTAGTCCTACTGATCTTCATTTCTTCAAGG
FD944465       <-- AGCTCGTTCTTCTCTCCTGCCTAGTCCTACTGATCTTCATTTCTTCAAGG
EX758625       <-- ........................................TTCTTCAAGG
FD961172       <-- ................................................GG
FD575586       <-- ..................................................
EW737879       <-- ..................................................
EX754261       --> AGCTCGTTCTTCTCTCTTGCCTAGTCCTACTGATCTTCATTTCTTCAAGG
EW733426       --> AGCTCGTTCTTCTCTCTTGCCTAGTCCTACTGATCTTCATTTCTTCAAGG
FD948716       --> AGCTCGTTCTTCTCTCCTGCCTAGTCCTACTGATCTTCATTTCTTCAAGG
FD965429       --> AGCTCGTTCTTCTCTCTTGCCTAGTCCTACTGATCTTCATTTCTTCAAGG
EW733256       --> AGCTCGTTCTTCTCTCTTGCCTAGTCCTACTGATCTTCATTTCTTCAAGG
FD970442       --> AGCTCGTTCTTCTCTCTTGCCTAGTCCTACTGATCTTCATTTCTTCAAGG
FY442631       --> AGCTCGTTCTTCTCTCTTGCCTAGTCCTACTGATCTTCATTTCTTCAAGG
FD571822       --> ....gGTTCTTCTCTCTTGCCTAGTCCTACTGATCTTCATTTCTTCAAGG

               401    -    451
UN21859        --> ATGGCATTCGCCCCTT-GTGGGAGGATTCTGCTAACTGCAATGGAGGAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW737948       <-- ATGGCATTCGCCCCTT-GTGGGAGGATTCTGCTAACTGCAATGGAGGAAA
EY909908       <-- ATGGCATTCGCCCCTT-GTGGGAGGATTCTGCTAACTGCAATGGAGGAAA
FD944465       <-- ATGGCATTCGCCCCTT-GTGGGAGGATTCTGCTAACTGCAATGGAGGAAA
EX758625       <-- ATGGCATTCGCCCCTT-GTGGGAGGATTCTGCTAACTGCAATGGAGGAAA
FD961172       <-- ATGGCATTCGCCCCTT-GTGGGAGGATTCTGCTAACTGCAATGGAGGAAA
FD575586       <-- ..................................................
EW737879       <-- ..................................................
EX754261       --> ATGGCATTCGCCCCTT-GTGGGAGGATTCTGCTAACTGCAATGGAGGAAA
EW733426       --> ATGGCATTCGCCCCTT-GTGGGAGGATTCTGCTAACTGCAATGGAGGAAA
FD948716       --> ATGGCATTCGCCCCTT-GTGGGAGGATTCTGCTAACTGCAATGGAGGAAA
FD965429       --> ATGGCATTCGCCCCTT-GTGGGAGGATTCTGCTAACTGCAATGGAGGAAA
EW733256       --> ATGGCATTCGCCCCTTTGTGGGAGGATTCTGCTAACTGCAATGGAGGAAA
FD970442       --> ATGGCATTCGCCCCTT-GTGGGAGGATTCTGCTAACTGCAATGGAGGAAA
FY442631       --> ATGGCATTCGCCCCTT-GTGGGAGGATTCTGCTAACTGCAATGGAGGAAA
FD571822       --> ATGGCATTCGCCCCTT-GTGGGAGGATTCTGCTAACTGCAATGGAGGAAA

               451    -    501
UN21859        --> GTGGATCATACGTTTCTCCAAAGTTGTATCCGCTCGCTTCTGGGAGGATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW737948       <-- GTGGATCATACGTTTCTCCAAAGTTGTATCCGCTCGCTTCTGGGAGGATC  Raphanus sativus cv Rat-Tail Radish #3870
EY909908       <-- GTGGATCATACGTTTCTCCAAAGTTGTATCCGCTCGCTTCTGGGAGGATC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD944465       <-- GTGGATCATACGTTTCTCCAAAGTTGTATCCGCTCGCTTCTGGGAGGATC  Raphanus sativus cv Early Scarlet Globe
EX758625       <-- GTGGATCATACGTTTCTCCAAAGTTGTATCCGCTCGCTTCTGGGAGGATC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD961172       <-- GTGGATCATACGTTTCTCTAAAGTTGTATCTGCTCGCTTCTGGGAGGATC  Raphanus raphanistrum subsp. maritimus
FD575586       <-- ................................................TC  Raphanus sativus cv Early Scarlet Globe
EW737879       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EX754261       --> GTGGATCATACGTTTCTCCAAAGTTGTATCCGCTCGCTTCTGGGAGGATC  Raphanus raphanistrum subsp. raphanistrum (MS)
EW733426       --> GTGGATCATACGTTTCTCCAAAGTTGTATCCGCTCGCTTCTGGGAGGATC  Raphanus sativus cv Rat-Tail Radish #3870
FD948716       --> GTGGATCATACGTTTCTCCAAAGTTGTATCCGCTCGCTTCTGGGAGGATC  Raphanus sativus cv Early Scarlet Globe
FD965429       --> GTGGATCATACGTTTCTCTAAAGTTGTATCTGCTCGCTTCTGGGAGGATC  Raphanus raphanistrum subsp. maritimus
EW733256       --> GTGGAaca..........................................  Raphanus sativus cv Rat-Tail Radish #3870
FD970442       --> GTGGATCATACGTTTCTCCAAAGTTGTATCCGCTCGCTTCTGGGAGGATC  Raphanus raphanistrum subsp. raphanistrum (MS)
FY442631       --> GTGGATCGTACGTTTCTCCAAAGTTGTATCTGCTCGCTTCTGGGAGGATC  Raphanus sativus cv GSK3-1
FD571822       --> GTGGATCGTACGTTTCTCCAAAGTTGTATCTGCTCGCTTCTGGGAGGATC  Raphanus sativus cv Early Scarlet Globe

               501    -    551
UN21859        --> TGCTTCTTGCCTTGGTAGGGGACCAGCTTGATGATGCTGACAATATCTGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW737948       <-- TGCTTCTTGCCTTGGTAGGGGACCAGCTTGATGATGCTGACAATATCTGT
EY909908       <-- TGCTTCTTGCCTTGGTAGGGGACCAGCTTGATGATGCTGACAATATCTGT
FD944465       <-- TGCTTCTTGCCTTGGTAGGGGACCAGCTTGATGATGCTGACAATATCTGT
EX758625       <-- TGCTTCTTGCCTTGGTAGGGGACCAGCTTGATGATGCTGACAATATCTGT
FD961172       <-- TGCTTCTTGCGTTGGTAGGGGACCAGCTTGATGATGCTGACAATATCTGT
FD575586       <-- TGCTTCTTGCCTTGGTAGGGGACCAGCTTGATGATGCTGACAATATCTGT
EW737879       <-- ..CTTCTTGCCTTGGTAGGGGACCAGCTTGATGATGCTGACAATATCTGT
EX754261       --> TGCTTCTTGCCTTGGTAGGGGACCAGCTTGATGATGCTGACAATATCTGT
EW733426       --> TGCTTCTTGCCTTGGTAGGGGACCAGCTTGATGATGCTGACAATATCTGT
FD948716       --> TGCTTCTTGCCTTGGTAGGGGACCAGCTTGATGATGCTGACAATATCTGT
FD965429       --> TGCTTCTTGCGTTGGTAGGGGACCAGCTTGATGATGCTGACAATATCTGT
EW733256       --> ..................................................
FD970442       --> TGCTTCTTGCCTTGGTAGGGGACCAGCTTGATGATGCTGACAATATCTGT
FY442631       --> TGCTTCTTGCCTTGGTAGGGGACCAGCTTGATGATGCTGACAATATCTGT
FD571822       --> TGCTTCTTGCCTTGGTAGGGGACCAGCTTGATGATGCTGACAATATCTGT

               551    -    601
UN21859        --> GGGG-CAGTACTGAGCGTCCGCTTCAACGAGGACATTATTAGTGTATGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW737948       <-- GGGG-CAGTACTGAGCGTCCGCTTCAACGAGGACATCATTAGTGTATGGA
EY909908       <-- GGGG-CAGTACTGAGCGTCCGCTTCAACGAGGACATTATTAGTGTATGGA
FD944465       <-- GGGG-CAGTACTGAGCGTCCGCTTCAACGAGGACATTATTAGTGTATGGA
EX758625       <-- GGGG-CAGTACTGAGCGTCCGCTTCAACGAGGACATTATTAGTGTATGGA
FD961172       <-- GGGG-CAGTACTGAGTGTCCGCTTCAACGAGGACATTATTAGTGTATGGA
FD575586       <-- GGGG-CAGTACTGAGCGTCCGCTTCAACGAGGACATTATTAGTGTATGGA
EW737879       <-- GGGG-CAGTACTGAGCGTCCGCTTCAACGAGAACATCATTAGTGTATGGA
EX754261       --> GGGG-CAGTACTGAGCGTCCGCTTCAACGAGGACATTATTAGTGTATGGA
EW733426       --> GGGGGCAGTACTGAGCGTCCGCTTCAACGAGGACATCATTAGTGTATGGA
FD948716       --> GGGG-CAGTACTGAGCGTCCGCT...........................
FD965429       --> GGGG-CAGTACTGAGTGTCCGCTTCAACGAGGACATTATTAGTGTATGGA
EW733256       --> ..................................................
FD970442       --> GGGG-CAGTACTGAGCGTCCGCTTCAACGAGGACATTATTAGTGTATGGA
FY442631       --> GGGG-CAGTACTGAGCGTCCGCTTCAACGAGGACATTATTAGTGTATGGA
FD571822       --> GGGG-CAGTACTGAGCGTCCGCTTCAACGAGGACATTATTAGTGTATGGA

               601    -    651
UN21859        --> ATCGCAATGCTTCTGATCATCAGGCAGTGATGGGTTTGAGAGACTCAATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW737948       <-- ATCGCAATGCTTCTGATCATCAGGCAGTGATGGGTTTGAGAGACTCAATC
EY909908       <-- ATCGCAATGCTTCTGATCATCAGGCAGTGATGGGTTTTAGAGACTCAATC
FD944465       <-- ATCGCAATGCTTCTGATCATCAGGCAGTGATGGGTTTGAGAGACTCAATC
EX758625       <-- ATCGCAATGCTTCTGATCATCAGGCAGTGATGGGTTTGAGAGACTCAATC
FD961172       <-- ATCGCAATGCTTCTGATCATCAGGCAGTGATGGGTTTGAGAGACTCAATC
FD575586       <-- ATCGCAATGCTTCTGATCATCAGGCAGTGATGGGTTTGAGAGACTCAATC
EW737879       <-- ATCGCAATGCTTCTGATCATCAGGCAGTGATGGGTTTGAGAGACTCAATC
EX754261       --> ATCGCAATGCTTCTGATCAT..............................
EW733426       --> ATCGCAATGCTTCTGATCATCACGCAGTGATGGGTTTGAGAGACTCAATC
FD948716       --> ..................................................
FD965429       --> ATCGCAATGCTTCTGATCATCAGGCAGTGATGGGTTTGAGAGACTCAATC
EW733256       --> ..................................................
FD970442       --> ATCGCAATGCTTCTGATCATCAGGCAGTGATGGGTTTGAGAGACTCAATC
FY442631       --> ATCGCAATGCTTCTGATCATCAGGCAGTGATGGGTTTGAGAGACTCAATC
FD571822       --> ATCGCAATGCTTCTGATCATCAGGCAGTGATGGGTTTGAGAGACTCAATC

               651    -    701
UN21859        --> AAGCGGCATTTGAAGCTGCCTCATGCTTATGTTATGGAATACAAACCCCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW737948       <-- AAGCGGCATTTGAAGCTGCCTCATGCTTATGTTATGGAATACAAACCCCA
EY909908       <-- AAGCGGCATTTGAAGCTGCCTCATGCTTATGTTATGGAATACAAGCCCCA
FD944465       <-- AAGCGGCATTTGAAGCTGCCTCATGCTTATGTTATGGAATACAAGCCCCA
EX758625       <-- AAGCGGCATTTGAAGCTGCCTCATGCTTATGTTATGGAATACAAACCCCA
FD961172       <-- AAGCGGCATTTGAAGCTGCCTCATGCTTATGTTATGGAATACAAACCCCA
FD575586       <-- AAGCGGCATTTGAAGCTGCCTCATGCTTATGTTATGGAATACAAACCCCA
EW737879       <-- AAGCGGCATTTGAAGCTGCCTCATGCTTATGTTATGGAATACAAACCCCA
EX754261       --> ..................................................
EW733426       --> AAGCGGCATTTGAAGCTGCCTCATGCTTATGTTATGGAATACAAACCCCA
FD948716       --> ..................................................
FD965429       --> AAGCGGCATTTGAAGCTGCCTCATGCTTATGTTATGGAATACAAACCCCA
EW733256       --> ..................................................
FD970442       --> AAGCGGCATTTGAAGCTGCCTCATGCTTATGTTATGGAATACAAACCCCA
FY442631       --> AAGCGGCATTTGAAGCTGCCTCATGCTTATGTTATGGAATACAAACCCCA
FD571822       --> AAGCGGCATTTGAAGCTGCCTCATGCTTATGTTATGGAATACAAACCCCA

               701    -    751
UN21859        --> CGATGCTTCTCTCCGCGACAACTCCTCCTACAGGAACACATGGATGAGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW737948       <-- CGATGCTTCTCTCCGCGACAACTCCTCCTACAGGAACACATGGATGAGAG
EY909908       <-- CGATGCTTCTCTCCGCGACAACTCCTCCTACAGGAACACATGGATGAGAG
FD944465       <-- CGATGCTTCTTTCCGCGACAACTCCTCCTACAGGAACACATGGATGAGAG
EX758625       <-- CGATGCTTCTCTCCGCGACAACTCCTCCTACAGGAACACATGGATGAGAG
FD961172       <-- CGATGCTTCTTTCCGCGACAACTCCTCCTACAGGAACACATGGATGAGAG
FD575586       <-- CGATGCTTCTTTCCGCGACAACTCCTCCTACAGGAACACATGGATGAGAG
EW737879       <-- CGATGCTTCTCTCCGCGACAACTCCTCCTACAGGAACACATGGATGAGAG
EX754261       --> ..................................................
EW733426       --> CGATGCTTCTCTCCGCGACAACTCCTCCTACAG--ACACATGGATGAGAG
FD948716       --> ..................................................
FD965429       --> CGATGCTTCTCTCCGCGACAACTCCTCCTACAG-AACACATGGATGAGAG
EW733256       --> ..................................................
FD970442       --> CGATGCTTCTCTCCGCGACAACTCCTCCTACAGGAACACATGGATGAGAG
FY442631       --> CGATGCTTCTCTCCGCGACAACTCCTCCTACAGGAACACATGGATGAGAG
FD571822       --> CGATGCTTCTCTCCGCGACAACTCCTCCTACAGGAACACATGGATGAGAG

               751    -    801
UN21859        --> GATAGAAGTAGACCATTGTGTAACGTGATGTGGAGAAAGATTTGGGTAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW737948       <-- GATAGAAGTAGACCATTGTGTAACGTGATGTGGAGAAAGATTTGGGTAGC
EY909908       <-- GATAGAAGTAGACCATTGTGTAACGTGATGTGGAGAAAGATTTGGGTAGC
FD944465       <-- GATAGAAGTAGACCATTGTGTAACGTGATGTGGAGAAAGATTTGGGTAGC
EX758625       <-- GATAGAAGTAGACCATTGTGTAACGTGATGTGGCGAGAGATTTGGGTAGC
FD961172       <-- GGTAGAAGTAGACCATTGTGTAACGTGATGTGGAGAAAGATTTGGGTAGC
FD575586       <-- GATAGAAGTAGACCATTGTGTAACGTGATGTGGAGAAAGATTTGGGTAGC
EW737879       <-- GATAGAAGTAGACCATTGTGTAACGTGATGTGGAGAAAGATTTGGGTAGC
EX754261       --> ..................................................
EW733426       --> GATAGAAGTAGACCATTGTGTAACGTGATGTG-AGAAAGATTTGGGTAGC
FD948716       --> ..................................................
FD965429       --> GGTAGAAGTAGAC-ATTGTGTAACGTGATGTGGAGAAAGATTTGGGTAGC
EW733256       --> ..................................................
FD970442       --> GATAGAAGTAGACCATTGTGTAACGTGATGTGGCGAGAGATTTGGGTAGC
FY442631       --> GATAGAAGTAGACCATTGTGTAACGTGATGTGGAGAAAGATTTGGGTAGC
FD571822       --> GATAGAAGTAGACCATTGTGTAACGTGATGTGGAGAAAGATTTGGGTAGC

               801    -    851
UN21859        --> TCTCTTGCAACCTTGGAAGAAGATGTATGGACTGAAACCCTGTTTCCTGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW737948       <-- TCTCTTGCAACCTTGGAA---GATGTATGGACTGAAACCCTGTTTCCTGT
EY909908       <-- TCTCTTGCAACCTTGGAAGAAGATGTATGGACTGAAACCCTGTTTCCTGT
FD944465       <-- TCTCTTGCAACCTTGGAAGAAGATGTATGGACTGAAACCCTGTTTCCTGT
EX758625       <-- TCTCTTGCAACCTTGGAAGAAGATGTATGGACTGAAACCCTGTTTCCTGT
FD961172       <-- TCTCTTGCAACCTTGGAAGAAGATGTATGGACTGAAACCCTGTTTCCTGT
FD575586       <-- TTTCTTGCAACCTTGGAAGAAGATGTATGGACTGAAACCCTGTTTCCTGT
EW737879       <-- ..................................................
EX754261       --> ..................................................
EW733426       --> TCT...............................................
FD948716       --> ..................................................
FD965429       --> TCTCTTGCA-CCTTGGAAGA-GATGTATGGACTGAAACCCTGTTTCCTGT
EW733256       --> ..................................................
FD970442       --> TCTCTTGCAACCTTGGAAGAAGATGTATGGACTGAAACCCTGTTTCCTGT
FY442631       --> TCTCTTGCAACCTTGGAAGAAGATGTATGGACTGAAACCCTGTTTCCTGT
FD571822       --> TCTCTTGCAACCTTGGAAGAAGATGTATGGACTGAAACCCTGTTTCCTGT

               851    -    901
UN21859        --> AGCACACTTTATCAACATTATATTTTTCCAATTACACTTTCAGACACTT-
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW737948       <-- AGCACACTTTATCAACATTATATTTTTCCAATTACACTTTCAGACACTT-
EY909908       <-- AGCACACTTTATCAACATTATATTTTTCCAATTACACTTTCAGACACTTT
FD944465       <-- AGCACACTTTATCAACATTATATTTTTCCAATTACACTTTCAGACACTTT
EX758625       <-- AGCACACTTTATCAACATTATATTTTTCCAATTACACTTTCAGATACTT-
FD961172       <-- AGCACACTTTATCAACATTATATTTTTCCAATTACACTTTCAGACACTT-
FD575586       <-- AGCACACTTTATCAACATTATATTTTTCCAATTACACTTTCAGACACTT-
EW737879       <-- ..................................................
EX754261       --> ..................................................
EW733426       --> ..................................................
FD948716       --> ..................................................
FD965429       --> AGCACACTTTATCAACATT-T-TTTTTCCAAT-ACACTTTCAGACACTT-
EW733256       --> ..................................................
FD970442       --> AGCACACTTTATCAACATTATATTTTTCCAATCACACTTTCAGATACTT-
FY442631       --> AGCACACTTTATCAACATTATATTTTTCCAATTACACTTTCAGACACTT-
FD571822       --> AGCACACTTTATCAACATTATATTTTTCCAATTACACTTTCAGACACTT-

               901    -    951
UN21859        --> GTGAATGGAGACACACATTGTTTATGTGCATTGTCTTTAGTACCCTCACT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW737948       <-- GTGGCTGGAGACACACATTGTTTATGTGCATTGTCTTTAGTACggg....  Raphanus sativus cv Rat-Tail Radish #3870
EY909908       <-- GTAGCTGGAGACACACATTGTTTATGTGCATTGTCTTTAGTACCCTCACT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD944465       <-- GTAGCTGGAGACACACATTGTTTATGTGCATTGTCTTTAGTACCCcc...  Raphanus sativus cv Early Scarlet Globe
EX758625       <-- GTGGTTGGAGACACACATTGTTTATGTGCATTGTCTTTAGTACCCTCACT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD961172       <-- GTAGCTGGAGACACACATTGTTTATGTGCATTGTCCTTAGTACCCTCACT  Raphanus raphanistrum subsp. maritimus
FD575586       <-- GTGAATGGAGACACACATTGCTTATGTGCGTTGTCTTTAGTACCCTCACT  Raphanus sativus cv Early Scarlet Globe
EW737879       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EX754261       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EW733426       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD948716       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD965429       --> GTagc.............................................  Raphanus raphanistrum subsp. maritimus
EW733256       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD970442       --> GTGGTTGGAGACACACATTGTTTATGTGCATTGTCTTTAGTA........  Raphanus raphanistrum subsp. raphanistrum (MS)
FY442631       --> GTGAATGGAGACACACATTGTTTATGTGCGTTGTCTTTAGTACCCTCACT  Raphanus sativus cv GSK3-1
FD571822       --> GTGAATGGAGACACACATTGCTTATGTGCGTTGTCTTTAGTACCCTCACT  Raphanus sativus cv Early Scarlet Globe

               951    -   1001
UN21859        --> TTACTACATTTATTTTTTAGTTCTAGTTCTCTTCCAACAAGTGCAATCTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW737948       <-- ..................................................
EY909908       <-- TTACTACATTT-TTTTTTAGTT............................
FD944465       <-- ..................................................
EX758625       <-- TTACTACATTT-TTTTTTAGTTCTAGTTCTCTTTCAACAAGTGCAATCTG
FD961172       <-- TTACAACATTT-TTTTTTAGTTCTAGTTCTCTTCCAACAAGTGCAATCTG
FD575586       <-- TTACTACATTTATTTTTTAGTTCTAGTTCTCTTCCAACAAGTGCAATCTG
EW737879       <-- ..................................................
EX754261       --> ..................................................
EW733426       --> ..................................................
FD948716       --> ..................................................
FD965429       --> ..................................................
EW733256       --> ..................................................
FD970442       --> ..................................................
FY442631       --> TTACTACATTTATTTTTTAGTTCTAGTTCTCTTCCAACAAGTGCAATCTG
FD571822       --> TTACTACATTTATTTTTTAGTTCTAGTTCTCTTCCAACAAGTGCAATCTG

               1001   -   1051
UN21859        --> TCAAATTTGTAAAATAATAATTTATCTCTTAACCTTTCTTTTCTCTCTCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW737948       <-- ..................................................
EY909908       <-- ..................................................
FD944465       <-- ..................................................
EX758625       <-- TCAAATTTATAAAA....................................
FD961172       <-- TCAAATTTATAAAA....................................
FD575586       <-- TCAAATTTGTAAAATAATAATTTATCTCTTAACCTTTCTTTTCTCTCTCC
EW737879       <-- ..................................................
EX754261       --> ..................................................
EW733426       --> ..................................................
FD948716       --> ..................................................
FD965429       --> ..................................................
EW733256       --> ..................................................
FD970442       --> ..................................................
FY442631       --> TCAAATTTGTAAAATAATAATTTATCTCTTAACt................
FD571822       --> TCAAATTTGTAAAATAATAATTTATCTCTTAACC................

               1051   -   1101
UN21859        --> CACTTTCGAAATCAGATTTTGAAAGTAAATCCATTTCCAATTTATCTTTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW737948       <-- ..................................................
EY909908       <-- ..................................................
FD944465       <-- ..................................................
EX758625       <-- ..................................................
FD961172       <-- ..................................................
FD575586       <-- CACTTTCGAAATCAGATTTTGAAAGTAAATCCATTTCCAATTTATCTTTA
EW737879       <-- ..................................................
EX754261       --> ..................................................
EW733426       --> ..................................................
FD948716       --> ..................................................
FD965429       --> ..................................................
EW733256       --> ..................................................
FD970442       --> ..................................................
FY442631       --> ..................................................
FD571822       --> ..................................................

               1101   -   1151
UN21859        --> GTAC
                   ~~~~
EW737948       <-- ....
EY909908       <-- ....
FD944465       <-- ....
EX758625       <-- ....
FD961172       <-- ....
FD575586       <-- GTAC
EW737879       <-- ....
EX754261       --> ....
EW733426       --> ....
FD948716       --> ....
FD965429       --> ....
EW733256       --> ....
FD970442       --> ....
FY442631       --> ....
FD571822       --> ....