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Alignment for radish unigene UN21889

               1      -     51
UN21889        --> GCAAACTATGGAGGTTCGACACGGAAGGCTTACCTGCATACCTCATCAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD553145       <-- ..................................................
EX774814       <-- ..................................................
FD554260       <-- ..................................................
FD976859       <-- ..................................................
FD969078       <-- ..................................................
EX766992       <-- ..................................................
EY908273       --> GCAAACTATGGAGGTTCGACACGGAAGGCTTACCTGCATACCTCATCAGC
FD973369       --> ..................................................
EY939404       --> ..................................................
FD558342       --> ..................................................
FD556933       --> ..................................................
FD981075       --> ..................................................
FD576656       --> ..................................................
EX762804       --> ..................................................

               51     -    101
UN21889        --> AGGGGTCTAGCTGTGGAAGATGAGACGGCGGCACATGGGGTACGCCTGGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD553145       <-- ..................................................
EX774814       <-- ..................................................
FD554260       <-- ..................................................
FD976859       <-- ..................................................
FD969078       <-- ..................................................
EX766992       <-- ..................................................
EY908273       --> AGGGGTCTAGCTGTGGAAGATGAGACGGCGGCACATGGGGTACGCCTGGC
FD973369       --> ...................................gGGGGTACGCCTGAC
EY939404       --> ..................................................
FD558342       --> ..................................................
FD556933       --> ..................................................
FD981075       --> ..................................................
FD576656       --> ..................................................
EX762804       --> ..................................................

               101    -    151
UN21889        --> GATACCAGATTACCCATTTGCTAATGACGGTTTAATGCTGTGGGATGCAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD553145       <-- ..................................................
EX774814       <-- ..................................................
FD554260       <-- ..................................................
FD976859       <-- ..................................................
FD969078       <-- ..................................................
EX766992       <-- ..................................................
EY908273       --> GATACCAGATTACCCATTTGCTAATGACGGTTTAATGCTGTGGGATGCAC
FD973369       --> GATACCAGATTACCCATTTGCTAATGACGGTTTAATGCTGTGGGATGCAC
EY939404       --> ..................................................
FD558342       --> ..................................................
FD556933       --> ..................................................
FD981075       --> ..................................................
FD576656       --> ..................................................
EX762804       --> ..................................................

               151    -    201
UN21889        --> TAAAGGAATGGATCACAGACTATGTGAAGCACTATTATCCAGATGCGGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD553145       <-- ..................................................
EX774814       <-- ..................................................
FD554260       <-- ..................................................
FD976859       <-- ..................................................
FD969078       <-- ..................................................
EX766992       <-- ..................................................
EY908273       --> TAAAGGAATGGATCACAGACTATGTGAAGCACTATTATCCAGATGCGGAA
FD973369       --> TAAAGGAATGGATCACAGACTATGTGAAGCACTATTATCCAGATGCGGAA
EY939404       --> ............gCACAGACTATGTGAAGCACTATTATCCAGATGCGGAA
FD558342       --> ..................................................
FD556933       --> ..................................................
FD981075       --> ..................................................
FD576656       --> ..................................................
EX762804       --> ..................................................

               201    -    251
UN21889        --> CATGTCATGTTGGATGAGGAACTCCAAGGATGGTGGAGTGAAGTGAGGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD553145       <-- ..................................................
EX774814       <-- ..................................................
FD554260       <-- ..................................................
FD976859       <-- ..................................................
FD969078       <-- ..................................................
EX766992       <-- ..................................................
EY908273       --> CATGTCATGTTGGATGAGGAACTCCAAGGATGGTGGAGTGAAGTGAGGAA
FD973369       --> CATGTCATGTTGGATGAGGAACTCCAAGGATGGTGGAGTGAAGTGAGGAA
EY939404       --> CAGGTCATGTTGGATGAGGAACTCCAAGGATGGTGGAGTGAAGTGAGGAA
FD558342       --> ................gGGAACTCCAAGGATGGTGGAGTGAAGTGAGGAA
FD556933       --> ...............................GGTGGAGTGAAGTGAGGAA
FD981075       --> ..................................................
FD576656       --> ..................................................
EX762804       --> ..................................................

               251    -    301
UN21889        --> CATAGGGCATGGAGACAAGAAAAATGAACCATGGTGGCCTGATCTCAAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD553145       <-- ........ATGGAGACGAGAAAAATGAACCATGGTGGCCTGATCTCAAAA
EX774814       <-- ....................AAAATGAACCATGGTGGCCTGATCTCAAAA
FD554260       <-- .................................................A
FD976859       <-- ..................................................
FD969078       <-- ..................................................
EX766992       <-- ..................................................
EY908273       --> CATAGGGCATGGAGACAAGAAAAATGAACCATGGTGGCCTGTCCTCAAAA
FD973369       --> CATAGGGCATGGAGACAAGAAAAATGAACCATGGTGGCCTGTCCTCAAAA
EY939404       --> CATAGGGCATGGAGACAAGAAAAATGAACCATGGTGGCCTGATCTCAAAA
FD558342       --> CATAGGGCATGGAGACAAGAAAAATGAACCATGGTGGCCTGATCTCAAAA
FD556933       --> CATAGGGCATGGAGACGAGAAAAATGAACCATGGTGGCCTGATCTCAAAA
FD981075       --> ..................................................
FD576656       --> ..................................................
EX762804       --> ..................................................

               301    -    351
UN21889        --> CACAAGATGACTTGATTGAAGTGGTGACCACGATTGCATGGGTGGCTTCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD553145       <-- CACAAGATGACTTGATTGAAGTGGTGACCACGATTGCATGGGTGGCTTCA
EX774814       <-- CACAAGATGACTTGATTGAAGTGGTGACCACGATTGCATGGGTGGCTTCA
FD554260       <-- CACAAGATGACTTGATTGAAGTGGTGACCACGATTGCATGGGTGGCTTCA
FD976859       <-- ...............................................TCA
FD969078       <-- ..................................................
EX766992       <-- ..................................................
EY908273       --> CACAAGATGACTTGATTGAAGTGGTGACCACGATTGCATGGGTGGCTTCA
FD973369       --> CACAAGATGACTTGATTGAAGTGGTGACCACGATTGCATGGGTGGCTTCA
EY939404       --> CTCAAGATGACTTGATTGAAGTGGTGACCACGATTGCATGGGTGGCTTCA
FD558342       --> CACAAGATGACTTGATTGAAGTGGTGACCACGATTGCATGGGTGGCTTCA
FD556933       --> CACAAGATGACTTGATTGAAGTGGTGACCACGATTGCATGGGTGGCTTCA
FD981075       --> ..gAAGATGACTTGATTGAAGTGGTGACCACGATTGCATGGGTGGCTTCA
FD576656       --> .......................GTGACCACGATTGCATGGGTGGCTTCA
EX762804       --> ..................................................

               351    -    401
UN21889        --> GGTCACCACGCTGCTGTAAACTTTGGACAGTACGGGTATGGGGGATACTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD553145       <-- GGTCACCATGCAGCTGTGAACTTTGGACAATACGGGTATGGGGGATACTT  Raphanus raphanistrum subsp. landra
EX774814       <-- GGTCACCATGCAGCTGTGAACTTTGGACAATACGGGTATGGGGGATACTT  Raphanus raphanistrum subsp. landra
FD554260       <-- GGTCACCATGCAGCTGTGAACTTTGGACAATACGGGTATGGGGGATACTT  Raphanus raphanistrum subsp. landra
FD976859       <-- GGTCACCACGCTGCTGTAAACTTTGGACAGTACGGGTATGGGGGATACTT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD969078       <-- .........GCTGCTGTAAACTTTGGACAGTACGGGTATGGGGGATACTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX766992       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY908273       --> GGTCACCACGCTGCTGTAAACTTTGGACAGTACGGGTATGGGGGATACTT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD973369       --> GGTCACCACGCTGCTGTAAACTTTGGACAGTACGGGTATGGGGGATACTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY939404       --> GGTCACCACGCTGCTGTAAACTTTGGACAGTACGGGTATGGGGGATACTT  Raphanus sativus cv Early Scarlet Globe
FD558342       --> GGTCACCATGCAGCTGTGAACTTTGGACAATACGGGTATGGGGGATACTT  Raphanus raphanistrum subsp. landra
FD556933       --> GGTCACCATGCAGCTGTGAACTTTGGACAATACGGGTATGGGGGATACTT  Raphanus raphanistrum subsp. landra
FD981075       --> GGTCACCACGCTGCTGTAAACTTTGGACAGTACGGGTATGGGGGATACTT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD576656       --> GGTCACCGCGCTGCTGTAAACTTTGGACAGTACGGGTATGGGGGATACTT  Raphanus sativus cv Rat-Tail Radish #3870
EX762804       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)

               401    -    451
UN21889        --> TCCCAACCGACCAACCACAACAAGGATAAAAATGCCAGTGGAAGAACCGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD553145       <-- TCCCAACCGACCAACCACAACAAGGATAAAAATGCCAGTGGAAGAACCGA
EX774814       <-- GCCCAACCGACCAACCACAACAAGGATAAAAATGCCAGTGGAAGAACCGA
FD554260       <-- TCCCAACCGACCAACCACAACAAGGATAAAAATGCCAGTGGAAG----AA
FD976859       <-- TCCCAACCGACCAACCACAACAAGGATAAAAATGCCAGTAGAAGAACCGA
FD969078       <-- TCCCAACCGACCAACCACAACAAGGATAAAAATGCCAGTGGAAGAACCGA
EX766992       <-- ..................................................
EY908273       --> TCCCAACCGACCAACCACAACAAGGATAAAAATGCCAGTGGAAGAACCGA
FD973369       --> TCCCAACCGACCAACCACAACAAGGATAAAAATGCCAGTGGAAGAACCGA
EY939404       --> TCCCAACCGACCAACCACAACAAGGATAAAAATGCCAGTGGAAGAATCGA
FD558342       --> TCCCAACCGACCAACCACAACAAGGATAAAAATGCCAGTGGAAGAAC---
FD556933       --> TCCCAACCGACCAACCACAACAAGGATAAAAATGCCAGTGGAAGAACCGA
FD981075       --> TCCCAACCGACCAACCACAACAAGGATAAAAATGCCAGTAGAAGAACCGA
FD576656       --> TCCCAACCGACCAACCACAACAAGGATAAAAATGCCAGTGGAAGAACCGA
EX762804       --> ..................................................

               451    -    501
UN21889        --> CAGAGGAAGAGCTAAGAGAGTTCTTTGAGGAGCCAGAGAAGACCATGCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD553145       <-- CAGAGGAAGAGCTCAGAGAGTTCTATGAGGAGCCAGAGAAGACTATGCTT  Raphanus raphanistrum subsp. landra
EX774814       <-- CAGAGGAAGAGCTCAGAGAGTTCTATGAGGAGCCAGAGAAGACTATGCTT  Raphanus raphanistrum subsp. landra
FD554260       <-- CAGAGGAAGAGCTCAGAGAGTTCTATGAGGAGCCAGAGAAGACTATGCTT  Raphanus raphanistrum subsp. landra
FD976859       <-- CAGAGGAAGAGCTAAGAGAGTTCTTTGAGGAGCCAGAGAAGACCATGCTT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD969078       <-- CAGAGGAAGAGCTAAGAGAGTTCTTTGAGGAGCCAGAGAAGACCATGCTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX766992       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY908273       --> CAGAGGAAGAGCTAAGAGAGTTCTTTGAGGAGCCAGAGAAGACCATGCTT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD973369       --> CAGAGGAAGAGCTAAGAGAGTTCTTTGAGGAGCCAGAGAAGACCATGCTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY939404       --> CAGAGGAAGAGCTAAGAGAGTTCTTTGAGGAGCCAGAGAAGACCATGCTT  Raphanus sativus cv Early Scarlet Globe
FD558342       --> -AGAGGAAGAGCTCAGAGAGTTCTATGAGGAGCCAGAGAAGACTATGCTT  Raphanus raphanistrum subsp. landra
FD556933       --> CAGAGGAAGAGCTCAGAGAGTTCTATGAGGAGCCAGAGAAGACTATGCTT  Raphanus raphanistrum subsp. landra
FD981075       --> CAGAGGAAGAGCTAAGAGAGTTCTTTGAGGAGCCAGAGAAGACCATGCTT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD576656       --> CAGAGGAAGAGCTAAGAGAGTTCTTTGAGGAGCCAGAGAAGACCATGCTT  Raphanus sativus cv Rat-Tail Radish #3870
EX762804       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)

               501    -    551
UN21889        --> AAGACATTCCCTTCGAAGAAGCAGGCGACCAAAGTGATGGTGACTTTGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD553145       <-- AAGACATTCCCTTCGAAGAAGCAGGCGACCAAAGTGATGGTGACTTTGGA
EX774814       <-- AAGACATTCCCTTCGAAGAAGCAGGCGACCAAAGTGATGGTGACTTTGGA
FD554260       <-- AAGACATTCCCTTCGAAGAAGCAGGCGACCAAAGTGATGGTGACTTTGGA
FD976859       <-- AAGACATTCCCTTCTAAGAAGCAGGCGACCAAAGTGATGGTGACTTTGGA
FD969078       <-- AAGACATTCCCTTCGAAGAAGCAGGCGACCAAAGTGATGGTGACTTTGGA
EX766992       <-- ..................................................
EY908273       --> AAGACATTCCCTTCGAAGAA..............................
FD973369       --> AAGACATTCCCTTCGAAGAAGCAGGCGACCAAAGTGATGGTGACTTTGGA
EY939404       --> AAGACATTCCCTTCGAAGAAGCAGGCGACCAAAGTGATGGTGACTTTGGA
FD558342       --> AAGACATTCCCTTCGAAGAAGCAGGCGACCAAAGTGATGGTGACTTTGGA
FD556933       --> AAGACATTCCCTTCGAAGAAGCAGGCGACCAAAGTGATGGTGACTTTGGA
FD981075       --> AAGACATTCCCTTCTAAGAAGCAGGCGACCAAAGTGATGGTGACTTTGGA
FD576656       --> AAGACATTCCCTTCGAAGAAGCAGGCGACCAATGTGATGGTGACTTTGGA
EX762804       --> ..................................................

               551    -    601
UN21889        --> TCTTCTATCATCACATTCACCAGATGAAGAGTACCTAGGGGAAAACCCAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD553145       <-- TCTTCTATCATCACATTCACCAGATGAAGAGTACCTAGGAGAAAACCCAG  Raphanus raphanistrum subsp. landra
EX774814       <-- TCTTCTATCATCACATTCACCAGATGAAGAGTACCTAGGAGAAAACCCAG  Raphanus raphanistrum subsp. landra
FD554260       <-- TCTTCTATCATCACATTCACCAGATGAAGAGTACCTAGGAGAAAACCCAG  Raphanus raphanistrum subsp. landra
FD976859       <-- TCTTCTATCATCACATTCACCAGATGAAGAGTACCTAGGGGAAAATCCAG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD969078       <-- TCTTCTATCATCACATTCACCAGATGAAGAGTACCTAGGGGAAAACCCAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX766992       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY908273       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD973369       --> TCTTCTATCATCACATTCACCAGATGAAGAGTACCTAGGGGAAAACCCAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY939404       --> TCTTCTATCATCACATTCACCAGATGAAGAGTACCTAGGGGAAAACCCAG  Raphanus sativus cv Early Scarlet Globe
FD558342       --> TCTTCTATCATCACATTCACCAGATGAAGAGTACCTAGGAGAAAACCCAG  Raphanus raphanistrum subsp. landra
FD556933       --> TCTTCTATCATCACATTCACCAGATGAAGAGTACCTAGGAGAAAACCCAG  Raphanus raphanistrum subsp. landra
FD981075       --> TCTTCTATCATCACATTCACCAGATGAAGAGTACCTAGGGGAAAATCCAG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD576656       --> TCTTCTATCATCACATTCACCAGATGAAGAGTACCCAGGGGAAAACCCAG  Raphanus sativus cv Rat-Tail Radish #3870
EX762804       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)

               601    -    651
UN21889        --> AAGCATCTTGGGCCCACGAACCTGTCATCTATGCTGCATATGAACGTTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD553145       <-- AAGCATCTTGGGCCCACGAACCTGTCATCTATGCTGCATATGAACGTTTC
EX774814       <-- AAGCATCTTGGGCCCACGAACCTGTCATTTATGCTGCATATGAACGTTTC
FD554260       <-- AAGCATCTTGGGCCCACGAACCTGTCATCTATGCTGCATATGAACGTTTC
FD976859       <-- AAGCTTCTTGGGCCCACGAACCTGTCATCTATGCTGCATATGAACGTTTC
FD969078       <-- AAGCATCTTGGGCCCACGAACCTGTCATTTATGCTGCATATGAACGTTTC
EX766992       <-- ..................................................
EY908273       --> ..................................................
FD973369       --> AAGCATCTTGGGCCCACGAACCTGTCATCTATGCTGCATATGAACGTTTC
EY939404       --> AAGCATCTTGGGCCCACGAACCTGTCATCTATGCTGCATATGAACGTTTC
FD558342       --> AAGCATCTTGGGCCCACGAACCTGTCATCTATGCTGCATATGAACGTTTC
FD556933       --> AAGCATCTTGGGCCCACGAACCTGTCATCTATGCTGCATATGAACGTTTC
FD981075       --> AAGCTTCTTGGGCCCACGAACCTGTCATCTATGCTGCATATGAACGTTTC
FD576656       --> AAGCATCTTGGGCCCACGAACCTGTCATCTATGCTGCATATGAACGTTTC
EX762804       --> ..................................................

               651    -    701
UN21889        --> AAAGGCAAGCTCCAATACCTAGAAGGAGTGATAGATGAGAGGAACGTGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD553145       <-- AAAGGCAAGCTCCAATACCTAGAAGGAGTGATAGATGAGAGGAACGTGAA
EX774814       <-- AAAGGCAAGCTCCAATACCTAGAAGGAGTGATAGATGAGAGGAACGTGAA
FD554260       <-- AAAGGCAAGCTCCAATACCTAGAAGGAGTGATAGATGAGAGGAACGTGAA
FD976859       <-- AAAGGCAAGCTCCAATACCTAGAAGGAGTGATAGATGAGAGGAACGTGAA
FD969078       <-- AAAGGCAAGCTCCAATACCTAGAAGGAGTGATAGATGAGAGGAACGTGAA
EX766992       <-- .........gTCCAATACCTAGAAGGAGTGATAGATGAGAGGAACGTGAA
EY908273       --> ..................................................
FD973369       --> AAAGGCAAGCTCCAATACCTAGAAGGAGTGATAGATGAGAGGAACGTGAA
EY939404       --> AAAGGCAAGCTCCAATACCTAGAAGGAGTGATAGATGAGAGGAACGTGAA
FD558342       --> AAAGGCAAGCTCCAATACCTAGAAGGAGTGATAGATGAGAGGAACGTGAA
FD556933       --> AAAGGCAAGCTCCAATACCTAGAAGGAGTGATAGATGAGAGGAACGTGAA
FD981075       --> AAAGGCAAGCTCCAATACCTAGAAGGAGTGATAGATGAGAGGAACGTGAA
FD576656       --> AAAGGCAAGCTCCAATACCTAGAAGGAGTGATAGATG.............
EX762804       --> .........gTCCAATACCTAGAAGGAGTGATAGATGAGAGGAACGTGAA

               701    -    751
UN21889        --> TGTTTCTCTAAAGAATCGAGCTGGAGCAGGTGTTGTTAAGTACGAGCTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD553145       <-- TGTTTCTCTAAAGAATCGAGCTGGAGCAGGTGTTGTTAAGTACGAGCTTT
EX774814       <-- TGTTTCTTTAAAGAATCGAGCTGGAGCAGGTGTTGTTAAGTACGAGCTTT
FD554260       <-- TGTTTCTCTAAAGAATCGAGCTGGAGCAGGTGTTGTTAAGTACGAGCTTT
FD976859       <-- TGTTTCTCTAAAGAATCGAGCTGGAGCAGGTGTTGTTAAGTACGAGCTTT
FD969078       <-- TGTTTCTCTAAAGAATCGAGCTGGAGCAGGTGTTGTTAAGTACGAGCTTT
EX766992       <-- TGTTTCTCTAAAGAATCGAGCTGGAGCAGGTGTTGTTAAGTACGAGCTTT
EY908273       --> ..................................................
FD973369       --> TGTTTCTCTAAAGAATCGAGCTGGAGCAG-TGTTGTTAAGTACGAGCTTT
EY939404       --> TGTTTCTCTAAAGAATCGAGCTGGA.........................
FD558342       --> TGTTTCTCTAAAGAATCGAGCTGGAGCAGGTGTTGTTAAGTACGAGCTTT
FD556933       --> TGTTTCTCTAAAGAATCGAGCTGGAGCAGGTGTTGTTAAGTACGAGCTTT
FD981075       --> TGTTTCTCTAAAGAATCGAGCTGGAGCAGGTGTTGTTAAGTACGAGCTTT
FD576656       --> ..................................................
EX762804       --> TGTTTCTCTAAAGAATCGAGCTGGAGCAGGTGTTGTTAAGTACGAGCTTT

               751    -    801
UN21889        --> TGAAGCCTATCTCTGAACCCGGCGTTACCGGG-ATGGGTGTTCCCTACAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD553145       <-- TGAAGCCTATCTCTGAACCCGGCGTTACCGGG-ATGGGTGTTCCCTACAG
EX774814       <-- TGAAGCCTATCTCTGAACCCGGTGTTACCGGG-ATGGGTGTTCCCTACAG
FD554260       <-- TGAAGCCTATCTCTGAACCCGGCGTTACCGGG-ATGGGTGTTCCCTACAG
FD976859       <-- TGAAGCCTATCTCTGAACCCGGCGTTACCGGG-ATGGGTGTTCCCTACAG
FD969078       <-- TGAAGCCTATTTTTGAACCAGGCGCTACCGGG-ATGGGTGTTCCCTACAG
EX766992       <-- TGAAGCCTATCTCTGAACCCGGCGTTACCGGG-ATGGGTGTTCCCTACAG
EY908273       --> ..................................................
FD973369       --> TGAAGCCTATCTCTGAACC-AGCGCTACCGGGGATGGGTGTTCCCTACAG
EY939404       --> ..................................................
FD558342       --> TGAAGCCTATCTCTGAACCCGGCGTTACCGGG-ATGGGTGTTCCCTACAG
FD556933       --> TGAAGCCTATCTCTGAACCCGGCGTTACCGGG-ATGGGTGTTCCCTACAG
FD981075       --> TGAAGCCTATCTCTGAACCCGGCGTTACCGGG-ATGGGTGTTCCCTACAG
FD576656       --> ..................................................
EX762804       --> TGAAGCCTATCTCTGAACCCGGCGTTACCGGG-ATGGGTGTTCCCTACAG

               801    -    851
UN21889        --> TGTGTCTATTTGATCTCTAATGCATTGGAAGTTATCATCTACGTTTCATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD553145       <-- TGTGTCTATTTGATCTCTAATGCATTGGAAGTTATCATCTACGTTTCATC
EX774814       <-- TGTGTCTATTTGATCTTTAATGCATTGGAAGTTATCATTTACGTTTCATT
FD554260       <-- TGTGTCTATTTGATCTCTAATGCATTGGAAGTTATCATTTACGTTTCATT
FD976859       <-- TGTGTCTATTTGATCTCTAATGCATTGGAAGTTATCATCTACGTTTCATC
FD969078       <-- TGTGTCTATTTGATCTCTAATGCATTGGAAGTTATCATCTACGTTTCATT
EX766992       <-- TGTGTCTATTTGATCTCTAATGCATTGGAAGTTATCATCTACGTTTCATC
EY908273       --> ..................................................
FD973369       --> TGTGTCTATTTGATCTCTA-TGCATTGGAAGTTATCATCTACG.......
EY939404       --> ..................................................
FD558342       --> TGTGTCTATTTGATCTCTAATGCATTGGAAGTTATCATCTACGTTTCATC
FD556933       --> TGTGTCTATTTGATCTCTAATGCATTGGAAGTTATCATCTACGTTTCATC
FD981075       --> TGTGTCTATTTGATCTCTAATGCATTGGAAGTTATCATCTACGTTTCATC
FD576656       --> ..................................................
EX762804       --> TGTGTCTATTTGATCTCTAATGCATTGGAAGTTATCATCTACGTTTCATC

               851    -    901
UN21889        --> TACGTTTCTCCCAAGTTATGATCTATGTTTTTTT-CTTTCGTAATAAATA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD553145       <-- TACGTTTCTCCCAAGTTATGATCTATGTTTTTTT-CTTTCGTAATAAATA
EX774814       <-- TACGTTTCTCCCAAGTTATGATCTATGTTTTTTT-CTTTCGTAATAAATA
FD554260       <-- TACGTTTCTCCCAAGTTATGATCTATGTTTTTTT-CTTTCGTAATAAATA
FD976859       <-- TACGTTTCTCCCAAGTTATGATCTATGTTTTTTT-CTTTCGTAATAAATA
FD969078       <-- TACGTTTCTCCCAAGTTATGATCTATGTTTTTTTTCTTTCGTAATAAATA
EX766992       <-- TACGTTTCTCCCAAGTTATGATCTATGTTTTTTT-CTTTCGTAATAAATA
EY908273       --> ..................................................
FD973369       --> ..................................................
EY939404       --> ..................................................
FD558342       --> TACGTTTCTCCCAAGTTATGATCTATGTTTTTTT-CTTTCGTAATAAATA
FD556933       --> TACGTTTCTCCCAAGTTATGATCTATGTTTTTTT-CTTTCGTAAT.....
FD981075       --> TACGTTTCTCCCAAGTTATGATCTATGTTTTTTT-CTTTCGTAATAAATA
FD576656       --> ..................................................
EX762804       --> TACGTTTCTCCCAAGTTATGATCTATGTTTTTTT-CTTTCGTAATAAATA

               901    -    951
UN21889        --> ATGAATCTCACCCTGCTCAAGGGTACCTTGTTTGTGCTGGGAAGCTGTGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD553145       <-- ATGAATCTCACCCTGCTCAAGGGTACCTTGTTTGTGCTGGGAAGCTGTGA
EX774814       <-- ATGAATCTCACCCTGCTCAAAGGTACCTCGTTTGTGCTGGGAAGCTGTGA
FD554260       <-- ATAAATCTCACCCTGCTCAAGGGTACCTTGTTTGTGCTGGGAAGCTGTGA
FD976859       <-- ATGAATCTCACCCTGCTCAAGGGTACCTTGTTTGTGCTGGGAAGCTGTGA
FD969078       <-- ATGAATCTCACCCTGCTCAAGGGTACCTTGTTTGTGCTGGGAAGCTGTGA
EX766992       <-- ATGAATCTCACCCTGCTCAAGGGTACCCTGTTTGTGCTGGGAAGCTGTGA
EY908273       --> ..................................................
FD973369       --> ..................................................
EY939404       --> ..................................................
FD558342       --> ATa...............................................
FD556933       --> ..................................................
FD981075       --> ATGAATCTCACCCTGCTCAAGGGTACCTTGTTTGTGCTGGGAAGCTGTGA
FD576656       --> ..................................................
EX762804       --> ATGAATCTCACCCTGCTCAAGGGTACCCTGTTTGTGCTGGGAAGCTGTGA

               951    -   1001
UN21889        --> AGGATATTGATATGTTATTTCTTTTGGGAATAAGACAATGTGTGGTCGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD553145       <-- AGGATATTGATATGCTATTTCTTTTG........................  Raphanus raphanistrum subsp. landra
EX774814       <-- AGGATATTGACATGCTATTTCTTTTG........................  Raphanus raphanistrum subsp. landra
FD554260       <-- AGGATATTGATATGCTATTTCTTTTGGG......................  Raphanus raphanistrum subsp. landra
FD976859       <-- AGGATATTGATATGTTATTTCTTTTGGG......................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD969078       <-- AGGATATTGATATGTTATTTCTTTTGGGAATAAGACAATGTGTGGTCGTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX766992       <-- AGGATATTGATATGTTATTTCTTTTGGGAATAAGACAATGTGTGGTCGTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY908273       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD973369       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY939404       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD558342       --> ..................................................  Raphanus raphanistrum subsp. landra
FD556933       --> ..................................................  Raphanus raphanistrum subsp. landra
FD981075       --> AGGATATTGATATGTTATTTCTTTTGGGAAcaaaaaa.............  Raphanus raphanistrum subsp. raphanistrum (NY)
FD576656       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EX762804       --> AGGATATTGATATGTTATTTCTTTTGGGAATAAGACAATGTGTGGTCGTT  Raphanus raphanistrum subsp. raphanistrum (NY)

               1001   -   1051
UN21889        --> TTATGTTAAATTGGACTAAATATTGTTGGACGCAGGGCAACCACTACACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD553145       <-- ..................................................
EX774814       <-- ..................................................
FD554260       <-- ..................................................
FD976859       <-- ..................................................
FD969078       <-- TTATGTTAAATTGGACTAAATATTGTTGGACGCAGGGCAACCACTACACA
EX766992       <-- TTATGTTt..........................................
EY908273       --> ..................................................
FD973369       --> ..................................................
EY939404       --> ..................................................
FD558342       --> ..................................................
FD556933       --> ..................................................
FD981075       --> ..................................................
FD576656       --> ..................................................
EX762804       --> TTATGTTt..........................................

               1051   -   1101
UN21889        --> GAGTTGGCCTGACCTATCG
                   ~~~~~~~~~~~~~~~~~~~
FD553145       <-- ...................
EX774814       <-- ...................
FD554260       <-- ...................
FD976859       <-- ...................
FD969078       <-- GAGTTGGCCTGACCTATCG
EX766992       <-- ...................
EY908273       --> ...................
FD973369       --> ...................
EY939404       --> ...................
FD558342       --> ...................
FD556933       --> ...................
FD981075       --> ...................
FD576656       --> ...................
EX762804       --> ...................