RadishBase

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Alignment for radish unigene UN21907

               1      -     51
UN21907        --> ATCCACACAAATGAGTACAAGATGCCACAAAAA-GTCCAATAAGCTCCAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV549238       <-- ................gCAAGATGCCACAAAAAAGTCCAATAAGCTCCAT
EV548449       <-- ..................................................
FD571814       <-- ..................................................
EW716262       <-- ..................................................
FD557568       <-- ..................................................
FY453138       <-- ..................................................
FY444559       <-- ..................................................
EY922086       <-- ..................................................
FY436141       <-- ..................................................
FY435134       <-- ..................................................
FY449787       <-- ..................................................
FY451281       <-- ..................................................
FY451270       <-- ..................................................
FY432376       <-- ..................................................
FY448009       <-- ..................................................
EW723102       <-- ..................................................
FY432827       <-- ..................................................
FD941274       <-- ..................................................
FD941040       <-- ..................................................
FD975772       --> ATCCACACAAATGAGTACAAGATTCCACAAAAA-GTCCAATAAGCTCCAT
EV544751       --> ................gCAAGATGCCACAAAAA-GTCCAATAAGCTCCAT
EW727968       --> .................CAAGATGCCACAAAAA-GTCCAATAAGCTCCAT
EY918118       --> .......................GCCACAAAAA-GTCCAATAAGCTCCAT
EX776083       --> ...............................cA-GTCCAATAAGCTCCAT
EV544118       --> .................................gGTCCAATAAGCTCCAT
FD553647       --> ................................cgGTCCAATAAGCTCCAT
FY445757       --> ..........................................AGCTCCAT
FD936950       --> .........................................ggGCTCCAT
FD936775       --> ..................................................
FD575579       --> ..................................................

               51     -    101
UN21907        --> AGTATTAAACGGTATTACAAGAGATATTCGACCACACCTTAGCAGCACTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV549238       <-- AGTATTAAACGGTATTACAAGAGATATTCAACCACACCTTAGCAGCACTT
EV548449       <-- ..................................................
FD571814       <-- ..................................................
EW716262       <-- ..................................................
FD557568       <-- ..................................................
FY453138       <-- ..................................................
FY444559       <-- ..................................................
EY922086       <-- ..................................................
FY436141       <-- ..................................................
FY435134       <-- ..................................................
FY449787       <-- ..................................................
FY451281       <-- ..................................................
FY451270       <-- ..................................................
FY432376       <-- ..................................................
FY448009       <-- ..................................................
EW723102       <-- ..................................................
FY432827       <-- ..................................................
FD941274       <-- ..................................................
FD941040       <-- ..................................................
FD975772       --> AGTATTAAACGGTATTACAAGAGATATTCGACCACACCTTAGCAGCACTT
EV544751       --> AGTATTAAACGGTATTACAAGAGATATTCAACCACACCTTAGCAGCACTT
EW727968       --> AGTATTAAACGGTATTACAAGAGATATTCGACCACACCTTAGCAGCATTT
EY918118       --> AGTATTAAACGGTATTACAAGAGATATTCGACCACACCTTAGCAGCACTT
EX776083       --> AGTATTAAACGGTATTACAAGAGATATTCGACCACACCTTAGCAGCACTT
EV544118       --> AGTATTAAACGGTATTACAAGAGATATTCGACCACACCTTAGCAGCACTT
FD553647       --> AGTATTAAACGGTATTACAAGAGATATTCGACCACACCTTAGCAGCACTT
FY445757       --> AGTATTAAACGGTATTACAAGAGATATTCGACCACACCTTAGCAGCACTT
FD936950       --> AGTATTAAACGGTATTACAAGAGATATTCGGCCACACCTTAACAGCATTT
FD936775       --> ..................................................
FD575579       --> ..................................................

               101    -    151
UN21907        --> GTCTCAAAAGTTACTCTTTCACTTTGCTTACACCACTAAACGCAGTTACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV549238       <-- GTCTCAAAAGTTACTCTTTCACTTTGCTTCCACCACTAAACGCAGTTACA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV548449       <-- ..................TCACTTTGCTTACACCACTAAACGCAGTTACA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD571814       <-- .......................TTGCTTACACCACTAAACGCAGTTACA  Raphanus sativus cv Early Scarlet Globe
EW716262       <-- ..................................................  Raphanus sativus var. oleiformis
FD557568       <-- ..................................................  Raphanus raphanistrum subsp. landra
FY453138       <-- ..................................................  Raphanus sativus cv GSK3-1
FY444559       <-- ..................................................  Raphanus sativus cv GSK3-1
EY922086       <-- ..................................................  Raphanus raphanistrum subsp. landra
FY436141       <-- ..................................................  Raphanus sativus cv GSK3-1
FY435134       <-- ..................................................  Raphanus sativus cv GSK3-1
FY449787       <-- ..................................................  Raphanus sativus cv GSK3-1
FY451281       <-- ..................................................  Raphanus sativus cv GSK3-1
FY451270       <-- ..................................................  Raphanus sativus cv GSK3-1
FY432376       <-- ..................................................  Raphanus sativus cv GSK3-1
FY448009       <-- ..................................................  Raphanus sativus cv GSK3-1
EW723102       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FY432827       <-- ..................................................  Raphanus sativus cv GSK3-1
FD941274       <-- ..................................................  Raphanus sativus var. oleiformis
FD941040       <-- ..................................................  Raphanus sativus var. oleiformis
FD975772       --> GTCTCAAAAGTTACTCTTTCACTTTGCTTACACCACTAAACGCAGTTACA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV544751       --> GTCTCAAAAGTTACTCTTTCACTTTGCTTCCACCACTAAACGCAGTTACA  Raphanus raphanistrum subsp. raphanistrum (NY)
EW727968       --> GGCTCAAAAGTTACTCTTTCACTTTGCTTACACCACTAAACGCAGTTACA  Raphanus sativus cv Early Scarlet Globe
EY918118       --> GTCTCAAAAGTTACTCTTTCACTTTGCTTCCACCACTAAACGCAGTTACA  Raphanus raphanistrum subsp. landra
EX776083       --> GGCTCAAAAGTTACTCTTTCACTTTGCTTCCACCACTAAACGCAGTTACA  Raphanus raphanistrum subsp. landra
EV544118       --> GTCTCAAAAGTTACTCTTTCACCTTGCTTACACCACTAAACGCAGTTACA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD553647       --> GGCTCAAAAGTTACTCTTTCACTTTGCTTCCACCACTAAACGCAGTTACA  Raphanus raphanistrum subsp. landra
FY445757       --> GGCTCAAAAGTTACTCTTTCACTTTGCTTCCACCACTAAACGCAGTTACA  Raphanus sativus cv GSK3-1
FD936950       --> GGCTCAAAAGTTACTCTTTCACTTTGCTTACACCACTAAACGCGGTTACA  Raphanus sativus var. oleiformis
FD936775       --> .cCTCAAAAGTTACTCTTTCACTTTGCTTACACCACTAAACGCAGTTACA  Raphanus sativus var. oleiformis
FD575579       --> ....CAAAAGTTACTCTTTCACTTTGCTTACACCACTAAACGCAGTTACA  Raphanus sativus cv Early Scarlet Globe

               151    -    201
UN21907        --> AGAAGAAAGCACAACCCATGAAGCATATAGCAAGCTGCCTTTCTGTGCAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV549238       <-- AGAAGAAAGCACAACCCATGAAGCATATAGCAAGCTGCCTTTCTGTGCAG
EV548449       <-- AGAAGAAAGCACAACCCATGAAGCATATAGCAAGCTGCCTTTCTGTGCAG
FD571814       <-- AGAAGAAAGCACAACCCATGAAGCATATAGCAAGCTGCCTTTCTGTGCAG
EW716262       <-- ........................................TTCTGTGCAG
FD557568       <-- ..................................................
FY453138       <-- ..................................................
FY444559       <-- ..................................................
EY922086       <-- ..................................................
FY436141       <-- ..................................................
FY435134       <-- ..................................................
FY449787       <-- ..................................................
FY451281       <-- ..................................................
FY451270       <-- ..................................................
FY432376       <-- ..................................................
FY448009       <-- ..................................................
EW723102       <-- ..................................................
FY432827       <-- ..................................................
FD941274       <-- ..................................................
FD941040       <-- ..................................................
FD975772       --> AGAAGAAAGCACAACCCATGAAGCATATAGCAAGCTGCCTTTCTGTGCAG
EV544751       --> AGAAGAAAGCACAACCCATGAAGCATATAGCAAGCTGCCTTTCTGTGCAG
EW727968       --> AGAAGAAAGCACAACCCATGAAGCATATAGCAAGCTGCCTTTCTGTGCAG
EY918118       --> AGAAAAAAGCACAACCCATGAAGCATATAGCAAGCTGCCTTTCTGTGCAG
EX776083       --> AGAAGAAAGCACAACCCATGAAGCATATAGCAAACTGCCTTTCTGTGTAG
EV544118       --> AGAAGAAAGCACAACCCATGAAGCATATAGCAAGCTGCCTTTCTGTGCAG
FD553647       --> AGAAGAAAGCACAACCCATGAAGCATATAGCAAACTGCCTTTCTGTGCAG
FY445757       --> AGAAGAAAGCACAACCCATGAAGCATATAGCAAACTGCCTTTCTGTGCAG
FD936950       --> AGAAAAAAGCACAACCCATGAAGCATATAGCAAGCTGCCTTTCTGTGCAG
FD936775       --> AGAAGAAAGCACAACCCATGAAGCATATAGCAAGCTGCCTTTCTGTGCAG
FD575579       --> AGAAGAAAGCACAACCCATGAAGCATATAGCAAGCTGCCTTTCTGTGCAG

               201    -    251
UN21907        --> GACTAAAGAGTCCTCAA-GGGAAACACATAATAATATCAATCTCTCAGGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV549238       <-- GACTAAAGAGTCCTCAG-GGGAAACACATAATAATATCAATCTCTCAGGT  Raphanus raphanistrum subsp. raphanistrum (NY)
EV548449       <-- GACTAAAGAGTCCTCAA-GGGAAACACATAATAATATCAATCTCTCAGGT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD571814       <-- GACTAAAGAGTCCTCAA-GGGAAACACATAACAATATCAATCTCTCAGGT  Raphanus sativus cv Early Scarlet Globe
EW716262       <-- GACTAAAGAGTCCTCAA-GGGAAACACATAACAATATCAATCTCTCAGGT  Raphanus sativus var. oleiformis
FD557568       <-- ...............AA-GGGAAACACATAATAATATCAATCTCTCAGGT  Raphanus raphanistrum subsp. landra
FY453138       <-- ..................................................  Raphanus sativus cv GSK3-1
FY444559       <-- ..................................................  Raphanus sativus cv GSK3-1
EY922086       <-- ..................................................  Raphanus raphanistrum subsp. landra
FY436141       <-- ..................................................  Raphanus sativus cv GSK3-1
FY435134       <-- ..................................................  Raphanus sativus cv GSK3-1
FY449787       <-- ..................................................  Raphanus sativus cv GSK3-1
FY451281       <-- ..................................................  Raphanus sativus cv GSK3-1
FY451270       <-- ..................................................  Raphanus sativus cv GSK3-1
FY432376       <-- ..................................................  Raphanus sativus cv GSK3-1
FY448009       <-- ..................................................  Raphanus sativus cv GSK3-1
EW723102       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FY432827       <-- ..................................................  Raphanus sativus cv GSK3-1
FD941274       <-- ..................................................  Raphanus sativus var. oleiformis
FD941040       <-- ..................................................  Raphanus sativus var. oleiformis
FD975772       --> GACTAAAGAGTCCTCAA-GGGAAACACATAATAATATCAATCTCTCAGGT  Raphanus raphanistrum subsp. raphanistrum (NY)
EV544751       --> GACTAAAGAGTCCTCAG-GGGAAACACATAATAATATCAATCTCTCAGGT  Raphanus raphanistrum subsp. raphanistrum (NY)
EW727968       --> GACTAAAGAGTCCTCAA-GGGAAACACATAACAATATCAATCTCTCAGGT  Raphanus sativus cv Early Scarlet Globe
EY918118       --> GACTAAAGAGTCCTCAG-GGGAAACACATAATAATATCAATCTCTCAGGT  Raphanus raphanistrum subsp. landra
EX776083       --> GACTAAAGAGTCCTCAAAGGGAAACACATAATAATATCAATCTCTCAGGT  Raphanus raphanistrum subsp. landra
EV544118       --> GACTAAAGAGTCCTCAA-GGGAAACACATAATAATATCAATCTCTCAGGT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD553647       --> GACTAAAGAGTCCTCAAAGGGAAACACATAATAATATCAATCTCTCAGGT  Raphanus raphanistrum subsp. landra
FY445757       --> GACTAAAGAGTCCTCAAAGGGAAACACATAATAATATCAATCTCTCAGGT  Raphanus sativus cv GSK3-1
FD936950       --> GACTAAAGAGTCCTCAA-GGGAAACACATAACAATATCAATCTCTCAGGT  Raphanus sativus var. oleiformis
FD936775       --> GACTAAAGAGTCCTCAA-GGGAAACACATAACAATATCAATCTCTCAGGT  Raphanus sativus var. oleiformis
FD575579       --> GACTAAAGAGTCCTCAA-GGGAAACACATAACAATATCAATCTCTCAGGT  Raphanus sativus cv Early Scarlet Globe

               251    -    301
UN21907        --> TGAGATAATAAGAAAATATTTCACCTACGAGCAAGTCTCTGCCCTGCTCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV549238       <-- CGAGATAATAAGAAAATATTTCACCTACGAGCAAGTCTCTGCCCTGCTCC  Raphanus raphanistrum subsp. raphanistrum (NY)
EV548449       <-- CGAGATAATAAGAAAATATTTCACCTACGAGCAAGTCTCTGCCCTGATCC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD571814       <-- TGAGATAATAAGAAAATATTTCACCTACGAGCAAGTCTCTGCCCTGCTCC  Raphanus sativus cv Early Scarlet Globe
EW716262       <-- TGAGATAATAAGAAAATATTTCACCTACGGGCAAGTCTCTGCCCTGCTCC  Raphanus sativus var. oleiformis
FD557568       <-- TGAGATATTAATAAAATATTTCACCTACGAGCAAGTCTCTGCCCTGCTCC  Raphanus raphanistrum subsp. landra
FY453138       <-- ..................................................  Raphanus sativus cv GSK3-1
FY444559       <-- ..................................................  Raphanus sativus cv GSK3-1
EY922086       <-- ..................................................  Raphanus raphanistrum subsp. landra
FY436141       <-- ..................................................  Raphanus sativus cv GSK3-1
FY435134       <-- ..................................................  Raphanus sativus cv GSK3-1
FY449787       <-- ..................................................  Raphanus sativus cv GSK3-1
FY451281       <-- ..................................................  Raphanus sativus cv GSK3-1
FY451270       <-- ..................................................  Raphanus sativus cv GSK3-1
FY432376       <-- ..................................................  Raphanus sativus cv GSK3-1
FY448009       <-- ..................................................  Raphanus sativus cv GSK3-1
EW723102       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FY432827       <-- ..................................................  Raphanus sativus cv GSK3-1
FD941274       <-- ..................................................  Raphanus sativus var. oleiformis
FD941040       <-- ..................................................  Raphanus sativus var. oleiformis
FD975772       --> CGAGATAATAAGAAAATATTTCACCTACGAGCAAGTCTCTGCCCTGCTCC  Raphanus raphanistrum subsp. raphanistrum (NY)
EV544751       --> CGAGATAATAAGAAAATATTTCACCTACGAGCAAGTCTCTGCCCTGCTCC  Raphanus raphanistrum subsp. raphanistrum (NY)
EW727968       --> TGAGATAATAAGAAAATATTTCACCTACGAGCAAGTCTCTGCCCTGCTCC  Raphanus sativus cv Early Scarlet Globe
EY918118       --> CGAGATAATAAAAAAATATTTCACCTACGAGCAAGTCTCTGCCCTGCTCC  Raphanus raphanistrum subsp. landra
EX776083       --> TGAGATATTAATAAAATATTTCACCTACGAGCAAGTCTCTGCCCTGCTCC  Raphanus raphanistrum subsp. landra
EV544118       --> CGAGATAATAAGAAAATATTTCACCTACGAGCAAGTCTCTGCCCTGATCC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD553647       --> TGAGATATTAATAAAATATTTCACCTACGAGCAAGTCTCTGCCCTGCTCC  Raphanus raphanistrum subsp. landra
FY445757       --> TGAGATATTAATAAAATATTTCACCTACGAGCAAGTCTCTGCCCTGCTCC  Raphanus sativus cv GSK3-1
FD936950       --> TGAGATAATAAGAAAATATTTCACCTACGAGCAAGTCTCTGCCCTGCTCC  Raphanus sativus var. oleiformis
FD936775       --> TGAGATAATAAGAAAATATTTCACCTACGAGCAAGTCTCTGCCCTGCTCC  Raphanus sativus var. oleiformis
FD575579       --> TGAGATAATAAGAAAATATTTCACCTACGAGCAAGTCTCTGCCCTGCTCC  Raphanus sativus cv Early Scarlet Globe

               301    -    351
UN21907        --> AACCATTAAGGCCTTGCCGATAGCACTTGAATGAAGCCCACAAGCCAAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV549238       <-- AACCATTAAGGCCTTGCCGATAGCACTTGAATGAAGCCCACAAGCCAAAG
EV548449       <-- AACCATTAAGGCCTTGCCGATAGCACTTGAATGAAGCCCACAAGCCAAAG
FD571814       <-- AACCATTAAGGCCTTGCCGATAGCACTTGAATGAAGCCCACAAGCCAAAG
EW716262       <-- AACCATTAAGGCCTTGCCGATAGCACTTGAATGAAGCCCACAAGCCAAAG
FD557568       <-- AACCATTAAGGCCTTGCCGATAGCACTTGAATGAAGCCCACAAGCCAAAG
FY453138       <-- ......TAAGGCCTTGCCGATAGCACTTGAATGAAGCCCACAAGCCAAAG
FY444559       <-- ..................................................
EY922086       <-- ..................................................
FY436141       <-- ..................................................
FY435134       <-- ..................................................
FY449787       <-- ..................................................
FY451281       <-- ..................................................
FY451270       <-- ..................................................
FY432376       <-- ..................................................
FY448009       <-- ..................................................
EW723102       <-- ..................................................
FY432827       <-- ..................................................
FD941274       <-- ..................................................
FD941040       <-- ..................................................
FD975772       --> AACCATTAAGGCCTTGCCGATAGCACTTGAATGAAGCCCACAAGCCAAAG
EV544751       --> AACCATTAAGGCCTTGCCGATAGCACTTGAATGAAGCCCACAAGCCAAAG
EW727968       --> AACCATTAAGGCCTTGCCGATAGCACTTGAATGAAGCCCACAAGCCAAAG
EY918118       --> AACCATTAAGGCCTTGCCGATAGCACTTGAATGAAGCCCACAAGCCAAAG
EX776083       --> AACCATTAAGGCCTTGCCGATAGCACTTGAATGAAGCCCACAAGCCAAAG
EV544118       --> AACCATTAAGGCCTTGCCGATAGCACTTGAATGAAGCCCACAAGCCAAAG
FD553647       --> AACCATTAAGGCCTTGCCGATAGCACTTGAATGAAGCCCACAAGCCAAAG
FY445757       --> AACCATTAAGGCCTTGCCGATAGCACTTGAATGAAGCCCACAAGCCAAAG
FD936950       --> AACCATTAAGGCCTTGCCGATAGCACTTGAATGAAACCCACAAGCCAAAG
FD936775       --> AACCATTAAGGCCTTGCCGATAGCACTTGAATGAAGCCCACAAGCCAAAG
FD575579       --> AACCATTAAGGCCTTGCCGATAGCACTTGAATGAAGCCCACAAGCCAAAG

               351    -    401
UN21907        --> CAACTCCTCCTACAGCGATCCATTTCCAATCTACATTGAACTGCTCCTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV549238       <-- CAACTCCTCCTACAGCGATCCATTTCCAATCTACATTGAACTGCTCCTTT
EV548449       <-- CAACTCCTCCTACTGCGATCCATTTCCAATCTACATTGAACTGCTCCTTT
FD571814       <-- CAACTCCTCCTACAGCGATCCATTTCCAATCTACATTGAACTGCTCCTTT
EW716262       <-- CAACTCCTCCTACAGCGATCCATTTCCAATCTACATTGAACTGCTCCTTT
FD557568       <-- CAACTCCTCCTACAGCGATCCATTTCCAATCTACATTGAACTGCTCCTTT
FY453138       <-- CAACTCCTCCTACAGCGATCCATTTCCAATCTACATTGAACTGCTCCTTT
FY444559       <-- ..................................................
EY922086       <-- ..................................................
FY436141       <-- ..................................................
FY435134       <-- ..................................................
FY449787       <-- ..................................................
FY451281       <-- ..................................................
FY451270       <-- ..................................................
FY432376       <-- ..................................................
FY448009       <-- ..................................................
EW723102       <-- ..................................................
FY432827       <-- ..................................................
FD941274       <-- ..................................................
FD941040       <-- ..................................................
FD975772       --> CAACTCCTCCTACTGCGATCCATTTCCAATCTACATTGAACTGCTCCTTT
EV544751       --> CAACTCCTCCTACAGCGATCCATTTCCAATCTACATTGAACTGCTCCTTT
EW727968       --> TAACTCCTCCTACAGCGATCCATTTCAAATCTACATTGAACTGCTCCTTT
EY918118       --> CAACTCCTCCTACAGCGATCCATTTCCAATCTACATTGAACTGCTCCTTT
EX776083       --> CAACTCCTCCTACAGCGATCCATTTCCAATCTACATTGAACTGCTCCTTT
EV544118       --> CAACTCCTCCTACTGCGATCCATTTCCAATCTACATTGAACTGCTCCTTT
FD553647       --> CAACTCCTCCTACAGCGATCCATTTCCAATCTACATTGAACTGCTCCTTT
FY445757       --> CAACTCCTCCTACAGCGATCCATTTCCAATCTACATTGAACTGCTCCTTT
FD936950       --> CAACTCCTCCTACAGCGATCCATTTCCAATCTACATTGAACTGCTCCTTT
FD936775       --> CAACTCCTCCTACAGCGATCCATTTCCAATCTACATTGAACTGCTCCTTT
FD575579       --> CAACTCCTCCTACAGCGATCCATTTCCAATCTACATTGAACTGCTCCTTT

               401    -    451
UN21907        --> TGTCTCCTTGCCTTCTCCATGGCTTCTCCTCTCTCTTCTTCCTCCTCCTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV549238       <-- TGTCTCCTTGCCTTCTCCATGGCTTCTCCTCTCTCTTCTTCCTCC---TC  Raphanus raphanistrum subsp. raphanistrum (NY)
EV548449       <-- TGTCTCCTTGCCTTCTCCATGGCTTCTCCTCTCTCTTCTTCTTCCTCCTC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD571814       <-- TGTCTCCTTGCCTTCTCCATGGCTTCTCCTCTCTCTTCTTCCTCCTCCTC  Raphanus sativus cv Early Scarlet Globe
EW716262       <-- TGTCTCCTTGCCTTCTCCATGGCTTCTCCTCTCTCTTCTTCCTCCTCCTC  Raphanus sativus var. oleiformis
FD557568       <-- TGTCTCCTTGCCTTCTCCATGGCTTGTCCTCTCTCTTCTTCCTCCTCCTC  Raphanus raphanistrum subsp. landra
FY453138       <-- TGTCTCCTTGCCTTCTCCATGGCTTGTCCTCTCTCTTCTTCCTCCTCCTC  Raphanus sativus cv GSK3-1
FY444559       <-- ..................................................  Raphanus sativus cv GSK3-1
EY922086       <-- ..................................................  Raphanus raphanistrum subsp. landra
FY436141       <-- ..................................................  Raphanus sativus cv GSK3-1
FY435134       <-- ..................................................  Raphanus sativus cv GSK3-1
FY449787       <-- ..................................................  Raphanus sativus cv GSK3-1
FY451281       <-- ..................................................  Raphanus sativus cv GSK3-1
FY451270       <-- ..................................................  Raphanus sativus cv GSK3-1
FY432376       <-- ..................................................  Raphanus sativus cv GSK3-1
FY448009       <-- ..................................................  Raphanus sativus cv GSK3-1
EW723102       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FY432827       <-- ..................................................  Raphanus sativus cv GSK3-1
FD941274       <-- ..................................................  Raphanus sativus var. oleiformis
FD941040       <-- ..................................................  Raphanus sativus var. oleiformis
FD975772       --> TGTCTCCTTGCCTTCTCCATGGCTTCTCCTCTCTCTTCTTCTTCCTCCTC  Raphanus raphanistrum subsp. raphanistrum (NY)
EV544751       --> TGTCTCCTTGCCTTCTCCATGGCTTCTCCTCTCTCTTCTTCCTCCTC---  Raphanus raphanistrum subsp. raphanistrum (NY)
EW727968       --> TGTCTCCTTGCCTTCTCCATGGCTTCTCCTCTCTCTTCTTCCTCCTCCTC  Raphanus sativus cv Early Scarlet Globe
EY918118       --> TGTCTCCTTGCCTTCTCCATGGCTTGTCCTCTCTCTTCTTCCTCCTCCTC  Raphanus raphanistrum subsp. landra
EX776083       --> TGTCTCCTTGCCTTCTCCATGGCTTGTCCTCTCTCTTCTTCCTCCTCCTC  Raphanus raphanistrum subsp. landra
EV544118       --> TGTCTCCTTGCCTTCTCCATGGCTTCTCCTCTCTCTTCTTCTTCCTCCTC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD553647       --> TGTCTCCTTGCCTTCTCCATGGCTTGTCCTCTCTCTTCTTCCTCCTCCTC  Raphanus raphanistrum subsp. landra
FY445757       --> TGTCTCCTTGCCTTCTCCATGGCTTGTCCTCTCTCTTCTTCCTCCTCCTC  Raphanus sativus cv GSK3-1
FD936950       --> TGTCTCCTTGCCTTCTCCATGGCTTCTCCTCTCTCTTCTTCCTCCTCCTC  Raphanus sativus var. oleiformis
FD936775       --> TGTCTCCTTGCCTTCTCCATGGCTTCTCCTCTCTCTTCTCCCTCCTCCTC  Raphanus sativus var. oleiformis
FD575579       --> TGTCTCCTTGCCTTCTCCATGGCTTCTCCTCTCTCTTCTTCCTCCTCCTC  Raphanus sativus cv Early Scarlet Globe

               451    -    501
UN21907        --> TACTCTCGATGTTTCCACCAAATCCATGTTCAGCTTTGTGGTGACTCCTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV549238       <-- TACTCTCGATGTTTCCACCAAATCCATGTTCAGCTTTGTGGTGACTCCTG  Raphanus raphanistrum subsp. raphanistrum (NY)
EV548449       <-- TACTCTCGATGTTTCCACCAAATCCATGTTCAGCTTTGTGGTGACTCCTG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD571814       <-- TAATCTCGATGTTTCCACCAAATCCATGTTCAGCTTTGTGGTGACTCCTG  Raphanus sativus cv Early Scarlet Globe
EW716262       <-- TACTCTCGATGTTTCCACCAAATCCATGTTCAGCTTTGAGGTGACTCCTG  Raphanus sativus var. oleiformis
FD557568       <-- TACTCTCGATGTTTCCACCAAATCCATGTTCAGTTTTGTGGTGATTCCCG  Raphanus raphanistrum subsp. landra
FY453138       <-- TACTCTCGATGTTTCCACCAAATCCATGTTCAGTTTTGTGGTGATTCCCG  Raphanus sativus cv GSK3-1
FY444559       <-- ................ACCAAATCCATGTTCAGTTTTGTGGTGATTCCCG  Raphanus sativus cv GSK3-1
EY922086       <-- ..................................................  Raphanus raphanistrum subsp. landra
FY436141       <-- ..................................................  Raphanus sativus cv GSK3-1
FY435134       <-- ..................................................  Raphanus sativus cv GSK3-1
FY449787       <-- ..................................................  Raphanus sativus cv GSK3-1
FY451281       <-- ..................................................  Raphanus sativus cv GSK3-1
FY451270       <-- ..................................................  Raphanus sativus cv GSK3-1
FY432376       <-- ..................................................  Raphanus sativus cv GSK3-1
FY448009       <-- ..................................................  Raphanus sativus cv GSK3-1
EW723102       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FY432827       <-- ..................................................  Raphanus sativus cv GSK3-1
FD941274       <-- ..................................................  Raphanus sativus var. oleiformis
FD941040       <-- ..................................................  Raphanus sativus var. oleiformis
FD975772       --> TACTCTCGATGTTTCCACCAAATCCATGTTCAGCTTTGTGGTGACTCCTG  Raphanus raphanistrum subsp. raphanistrum (NY)
EV544751       --> TACTCTCGATGTTTCCACCAAATCCATGTTCAGCTTTGTGGTGACTCCTG  Raphanus raphanistrum subsp. raphanistrum (NY)
EW727968       --> TACTCTCGACGTTTCCACCAAATCCATGTTCAGCTTTGTGGTGACTCCTG  Raphanus sativus cv Early Scarlet Globe
EY918118       --> TACTCTCGATGTTTACACCAAATCCATGTTCAGTTTTGTGGGGATTCCCG  Raphanus raphanistrum subsp. landra
EX776083       --> TACTCCCGATGTTTCCACCAAATCCATGTTCAGTTTTGTGGTGATTCCCG  Raphanus raphanistrum subsp. landra
EV544118       --> TACTCTCGATGTTTCCACCAAATCCATGTTCAGCTTTGTGGTGACTCCTG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD553647       --> TACTCTCGATGTTTCCACCAAATCCATGTTCAGTTTTGTGGTGATTCCCG  Raphanus raphanistrum subsp. landra
FY445757       --> TACTCTCGATGTTTCCACCAAATCCATGTTCAGTTTTGTGGTGATTCCCG  Raphanus sativus cv GSK3-1
FD936950       --> TACTCTCGATGTTTCCACCAAATCCATGTTCAACTTTG............  Raphanus sativus var. oleiformis
FD936775       --> TACTCTCGATGTTTCCACCAAATCCATGTTCAGCTTTGTGGTGACTCCTG  Raphanus sativus var. oleiformis
FD575579       --> TAATCTCGATGTTTCCACCAAATCCATGTTCAGCTTTGTGGTGACTCCTG  Raphanus sativus cv Early Scarlet Globe

               501    -    551
UN21907        --> CCATTTGAGCGCTCCGTGACAGAGCCACCCCTGGCTTTCTAGCACTCTGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV549238       <-- CCATTTGAGCGCTTCGTGACAGAGCCACCC-TGTCTTTCTAGCGCTCTGG  Raphanus raphanistrum subsp. raphanistrum (NY)
EV548449       <-- CCATTTGAGCGCTCCTTGACAGAGCCACCCCTGTCTTTCTAGCGCTCTGA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD571814       <-- CCATTTGAGCGCTCCGTGACAGAGCCACCCCTGGCTTTCTAGCACTCTGA  Raphanus sativus cv Early Scarlet Globe
EW716262       <-- CCATTTGAGCGCTCCGTGACAGAGCCACCCCTGGCTTTCTAGCACTCTGA  Raphanus sativus var. oleiformis
FD557568       <-- CCATTTGAGCGCTCCGTGACAGAGCCACCCCTGGCTTTCTAGCACTCTGA  Raphanus raphanistrum subsp. landra
FY453138       <-- CCATTTGAGCGCTCCGTGACAGAGCCACCCCTGGCTTTCTAGCACTCTGA  Raphanus sativus cv GSK3-1
FY444559       <-- CCATTTGAGCGCTCCGTGACAGAGCCACCCCTGGCTTTCTAGCACTCTGA  Raphanus sativus cv GSK3-1
EY922086       <-- ..................................................  Raphanus raphanistrum subsp. landra
FY436141       <-- ..................................................  Raphanus sativus cv GSK3-1
FY435134       <-- ..................................................  Raphanus sativus cv GSK3-1
FY449787       <-- ..................................................  Raphanus sativus cv GSK3-1
FY451281       <-- ..................................................  Raphanus sativus cv GSK3-1
FY451270       <-- ..................................................  Raphanus sativus cv GSK3-1
FY432376       <-- ..................................................  Raphanus sativus cv GSK3-1
FY448009       <-- ..................................................  Raphanus sativus cv GSK3-1
EW723102       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FY432827       <-- ..................................................  Raphanus sativus cv GSK3-1
FD941274       <-- ..................................................  Raphanus sativus var. oleiformis
FD941040       <-- ..................................................  Raphanus sativus var. oleiformis
FD975772       --> CCATTTGAGCGCTCCTTGACAGAGCCACCCCTGTCTTTCTAGCGCTCTGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV544751       --> CCATTTGAGCGCTTCGTGACAGAGCCACCC-TGTCTTTCTAGCGCTCTGG  Raphanus raphanistrum subsp. raphanistrum (NY)
EW727968       --> CCATTTGAGCGCTCCGTGACAGAGCCACCCCTGGCTTTCTAGCACTCTGA  Raphanus sativus cv Early Scarlet Globe
EY918118       --> CCATTTGAGCGCTCCGTGACAGAGCCACCCCTGGCTTTCTAGCACTCTGA  Raphanus raphanistrum subsp. landra
EX776083       --> CCATTTGAGCGCTCCGTGACAGAGCCACCCCTGGCTTTCTAGCACTCTGA  Raphanus raphanistrum subsp. landra
EV544118       --> CCATTTGAGCGCTCCTTGACAGAGCCACCCCTGTCTTTCTAGCGCTCTGA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD553647       --> CCATTTGAGCGCTCCGTGACAGAGCCACCCCTGGCTTTCTAGCACTCTGA  Raphanus raphanistrum subsp. landra
FY445757       --> CCATTTGAGCGCTCCGTGACAGAGCCACCCCTGGCTTTCTAGCACTCTGA  Raphanus sativus cv GSK3-1
FD936950       --> ..................................................  Raphanus sativus var. oleiformis
FD936775       --> CCATTTGAGCGCTCCGTGACAGAGCCACCCCTGGCTTTCTAGCACTCTGA  Raphanus sativus var. oleiformis
FD575579       --> CCATTTGAGCGCTCCGTGACAGAGCCACCCCTGGCTTTCTAGCACTCTGA  Raphanus sativus cv Early Scarlet Globe

               551    -    601
UN21907        --> TACGCCCTTAACCCGGAGTTGAGCTTTTTGACGGCTCCCCACATGCCATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV549238       <-- TACGCCCTTAACCCGGAGTTTAGCTTTTTGACGGCTCCCCACATGCCATG  Raphanus raphanistrum subsp. raphanistrum (NY)
EV548449       <-- TACGCCCTTAACCCGGAGGTTAGCTTTTTGACGGCTCCCCACATGCCATG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD571814       <-- TACGCCCTTAACCCGGAGTTTAGCTTTTTGACGGCTCCCCATATGCCATG  Raphanus sativus cv Early Scarlet Globe
EW716262       <-- TACGCCCTTAACCCGGAGTTTAGCTTTTTGACGGCTCCCCACATGCCATG  Raphanus sativus var. oleiformis
FD557568       <-- TACGCCCTTAACCCGGAATTGAGCTTTTTGACGGCTCCCCACATGCCATG  Raphanus raphanistrum subsp. landra
FY453138       <-- TACGCCCTTAACCCGGAATTGAGCTTTTTGACGGCTCCCCACATGCCATG  Raphanus sativus cv GSK3-1
FY444559       <-- TACGCCCTTAACCCGGAATTGAGCTTTTTGACGGCTCCCCACATGCCATG  Raphanus sativus cv GSK3-1
EY922086       <-- ..........ACCCGGAATTGAGCTTTT-GACGGCTCCCCACATGCCATG  Raphanus raphanistrum subsp. landra
FY436141       <-- ..................................................  Raphanus sativus cv GSK3-1
FY435134       <-- ..................................................  Raphanus sativus cv GSK3-1
FY449787       <-- ..................................................  Raphanus sativus cv GSK3-1
FY451281       <-- ..................................................  Raphanus sativus cv GSK3-1
FY451270       <-- ..................................................  Raphanus sativus cv GSK3-1
FY432376       <-- ..................................................  Raphanus sativus cv GSK3-1
FY448009       <-- ..................................................  Raphanus sativus cv GSK3-1
EW723102       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FY432827       <-- ..................................................  Raphanus sativus cv GSK3-1
FD941274       <-- ..................................................  Raphanus sativus var. oleiformis
FD941040       <-- ..................................................  Raphanus sativus var. oleiformis
FD975772       --> TACGCCCTTAACCCGGAGGTTAGCTTTTTGACGGCTCCCCACATGCCATG  Raphanus raphanistrum subsp. raphanistrum (NY)
EV544751       --> TACGCCCTTAACCCGGAGTTTAGCTTTTTGACGGCTCCCCACATGCCATG  Raphanus raphanistrum subsp. raphanistrum (NY)
EW727968       --> TACGCCCTTAACCCGGAGTTTAGCTTTTTGACGGCTCCCCACATGCCATG  Raphanus sativus cv Early Scarlet Globe
EY918118       --> TACGCCCTTAACCCGGAATTGAGCTTTTTGACGGCTCCCCACATGCCATG  Raphanus raphanistrum subsp. landra
EX776083       --> TACGCCCTTAACCCGGAATTGAGCTTTTTGACGGCTCCCCACATGCCATG  Raphanus raphanistrum subsp. landra
EV544118       --> TACGCCCTTAACCCGGAGGTTAGCTTTTTGACGGCTCCCCACATGCCATG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD553647       --> TACGCCCTTAACCCGGAATTGAGCTTTTTGACGGCTCCCCACATGCCATG  Raphanus raphanistrum subsp. landra
FY445757       --> TACGCCCTTAACCCGGAATTGAGCTTTTTGACGGCTCCCCACATGCCATG  Raphanus sativus cv GSK3-1
FD936950       --> ..................................................  Raphanus sativus var. oleiformis
FD936775       --> TACGCCCTTAACCCGGAGTTTAGCTTTTTGACGGCTCCCCGCATGCCATG  Raphanus sativus var. oleiformis
FD575579       --> TACGCCCTTAACCCGGAGTTTAGCTTTTTGACGGCTCCCCATATGCCATG  Raphanus sativus cv Early Scarlet Globe

               601    -    651
UN21907        --> ACGGACTCCTAGCTTCGCTACGTCTTTTGGGATTCCCATGTCTTCGCAGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV549238       <-- ACGGACACCTAGCTTCGCTACGTCTTTTGGGATTCCCATGTCTTCc....  Raphanus raphanistrum subsp. raphanistrum (NY)
EV548449       <-- ACGGACTCCTAGCTTCGCTACGTCTTTTGGGATTCCCATGTCTTCGCAGT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD571814       <-- ACGGACACCTAGCTTCGCTACGTCTTTTGGGATTCCCATGTCTTCGCAGT  Raphanus sativus cv Early Scarlet Globe
EW716262       <-- ACGGACACCTAGCTTCGCTACGTCTTTTGGGATTCCCATGTCTTCGCAGT  Raphanus sativus var. oleiformis
FD557568       <-- ACGGACTCCTAGCTTCGCTACGTCTTTTGGGATTCCCATGTCTTCGCAGT  Raphanus raphanistrum subsp. landra
FY453138       <-- ACGGACTCCTAGCTTCGCTACGTCTTTTGGGATTCCCATGTCTTCGCAGT  Raphanus sativus cv GSK3-1
FY444559       <-- ACGGACTCCTAGCTTCGCTACGTCTTTTGGGATTCCCATGTCTTCGCAGT  Raphanus sativus cv GSK3-1
EY922086       <-- ACGGACTCCTAGCTTCGCTACGTCTTTTGGGATTCCCATGTCTTCGCAGT  Raphanus raphanistrum subsp. landra
FY436141       <-- ..................................................  Raphanus sativus cv GSK3-1
FY435134       <-- ..................................................  Raphanus sativus cv GSK3-1
FY449787       <-- ..................................................  Raphanus sativus cv GSK3-1
FY451281       <-- ..................................................  Raphanus sativus cv GSK3-1
FY451270       <-- ..................................................  Raphanus sativus cv GSK3-1
FY432376       <-- ..................................................  Raphanus sativus cv GSK3-1
FY448009       <-- ..................................................  Raphanus sativus cv GSK3-1
EW723102       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FY432827       <-- ..................................................  Raphanus sativus cv GSK3-1
FD941274       <-- ..................................................  Raphanus sativus var. oleiformis
FD941040       <-- ..................................................  Raphanus sativus var. oleiformis
FD975772       --> ACGGACTCCTAGCTTCGCTACGTCTTTTGGGATTCCCATGTCTTCGCAGT  Raphanus raphanistrum subsp. raphanistrum (NY)
EV544751       --> ACGGACACCTAGCTTCGCTACGTCTTTTGGGATTCCCATGTCTTCc....  Raphanus raphanistrum subsp. raphanistrum (NY)
EW727968       --> ACGGACACCTAGCTTCGCTACGTCTTTTGGGATTCCCATGTCTTCGCAGT  Raphanus sativus cv Early Scarlet Globe
EY918118       --> ACGGACTCCTAGCTTCGCTACGTCTTTTGGGATTCCCATGTCTTCGCAGT  Raphanus raphanistrum subsp. landra
EX776083       --> ACGGACTCCTAGCTTCGCTACGTCTTTTGGGATTCCCATGTCTTCGCAGT  Raphanus raphanistrum subsp. landra
EV544118       --> ACGGACTCCTAGCTTCGCTACGTCTTTTGGGATTCCCATGTCTTCGCAGT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD553647       --> ACGGACTCCTAGCTTCGCTACGTCTTTTGGGATTCCCATGTCTTCGCAGT  Raphanus raphanistrum subsp. landra
FY445757       --> ACGGACTCCTAGCTTCGCTACGTCTTTTGGGATTCCCATGTCTTCGCAGT  Raphanus sativus cv GSK3-1
FD936950       --> ..................................................  Raphanus sativus var. oleiformis
FD936775       --> ACGGACACCTAGCTTCGCTACGTCTTTTGGGATTCCCATGTCTTCGCAGT  Raphanus sativus var. oleiformis
FD575579       --> ACGGACACCTAGCTTCGCTACGTCTTTTGGGATTCCCATGTCTTCGCAGT  Raphanus sativus cv Early Scarlet Globe

               651    -    701
UN21907        --> GGACAAGAGAGACTTCACAAGCTGACATTTGTCCATCCCCTTTTCGAGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV549238       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV548449       <-- GGACAAGAGAGACTTCACAAGCTGACATTTGTCCATCCCTTTTTCGAGAT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD571814       <-- GGACAAGAGAGACTTCACAAGCTGTCATTTGTCCATCCCCTTTTCGAGAT  Raphanus sativus cv Early Scarlet Globe
EW716262       <-- GGACAAGAGAGACTTCACAAGCTGTCATTTGTCCATCCCCTTTTCGAGAT  Raphanus sativus var. oleiformis
FD557568       <-- GGACAAGAGAGACTTCACAAGCTGACATTTGTCCATCCCCTTTTCGAGAT  Raphanus raphanistrum subsp. landra
FY453138       <-- GGACAAGAGAGACTTCACAAGCTGACATTTGTCCATCCCCTTTTCGAGAT  Raphanus sativus cv GSK3-1
FY444559       <-- GGACAAGAGAGACTTCACAAGCTGACATTTGTCCATCCCCTTTTCGAGAT  Raphanus sativus cv GSK3-1
EY922086       <-- GGACAAGAGAGACTTCACAAGCTGACATTTGTCCATCCCCTTTTCGAGAT  Raphanus raphanistrum subsp. landra
FY436141       <-- ................................................AT  Raphanus sativus cv GSK3-1
FY435134       <-- ..................................................  Raphanus sativus cv GSK3-1
FY449787       <-- ..................................................  Raphanus sativus cv GSK3-1
FY451281       <-- ..................................................  Raphanus sativus cv GSK3-1
FY451270       <-- ..................................................  Raphanus sativus cv GSK3-1
FY432376       <-- ..................................................  Raphanus sativus cv GSK3-1
FY448009       <-- ..................................................  Raphanus sativus cv GSK3-1
EW723102       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FY432827       <-- ..................................................  Raphanus sativus cv GSK3-1
FD941274       <-- ..................................................  Raphanus sativus var. oleiformis
FD941040       <-- ..................................................  Raphanus sativus var. oleiformis
FD975772       --> GGACAAGAGAGACTTCACAAGCTGACATTTGTCCATCCCCTTTTCGAGAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EV544751       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EW727968       --> GGACAAGAGAGACTTCACAAGCTGTCATTTGTCCATCCCCTTTTCGAGAT  Raphanus sativus cv Early Scarlet Globe
EY918118       --> GGACAAG...........................................  Raphanus raphanistrum subsp. landra
EX776083       --> GGACAAGAGAGACTTCACAAGCTGACATTTGTCCATCCCCTTTTCGAGAT  Raphanus raphanistrum subsp. landra
EV544118       --> GGACAAGAGAGACTTCACAAGCTGACATTTGTCCATCCCTTTTTCGAGAT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD553647       --> GGACAAGAGAGACTTCACAAGCTGACATTTGTCCATCCCCTTTTCGAGAT  Raphanus raphanistrum subsp. landra
FY445757       --> GGACAAGAGAGACTTCACAAGCTGACATTTGTCCATCCCCTTTTCGAGAT  Raphanus sativus cv GSK3-1
FD936950       --> ..................................................  Raphanus sativus var. oleiformis
FD936775       --> G.................................................  Raphanus sativus var. oleiformis
FD575579       --> GGACAAGAGAGACTTCACAAGCTGTCATTTGTCCATCCCCTTTTCGAGAT  Raphanus sativus cv Early Scarlet Globe

               701    -    751
UN21907        --> TCAACTGCTCTGATTATCCAGCTTGAGAAATAAAGCTCCACTCGCCTTGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV549238       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV548449       <-- TCAACAGCTTTGATTATCCAGCTTGAGAAATAAAGCTCCACTCGCCTTGG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD571814       <-- TCAACTGATTTGATTATACAGCTTGAGAAATAAAGCTCCACTCGCCTTGG  Raphanus sativus cv Early Scarlet Globe
EW716262       <-- TCAACTGATTTGATTATCCAGCTTGAGAAATAAAGCTCCACTCGCCTTGG  Raphanus sativus var. oleiformis
FD557568       <-- TCAACTGCTCTGATTATCCAGCTTGAGAAATAAAGCTCCACTCGCCTTGG  Raphanus raphanistrum subsp. landra
FY453138       <-- TCAACTGCTCTGATTATCCAGCTTGAGAAATAAAGCTCCACTCGCCTTGG  Raphanus sativus cv GSK3-1
FY444559       <-- TCAACTGCTCTGATTATCCAGCTTGAGAAATAAAGCTCCACTCGCCTTGG  Raphanus sativus cv GSK3-1
EY922086       <-- TCAACTGCTCTGATTATCCAGCTTGAGAAATAAAGCTCCACTCGCCTTGG  Raphanus raphanistrum subsp. landra
FY436141       <-- TCAACTGCTCTGATTATCCAGCTTGAGAAATAAAGCTCCACTCGCCTTGG  Raphanus sativus cv GSK3-1
FY435134       <-- ............................AATAAAGCTCCACTCGCCTTGG  Raphanus sativus cv GSK3-1
FY449787       <-- ............................AATAAAGCTCCACTCGCCTTGG  Raphanus sativus cv GSK3-1
FY451281       <-- ............................AATAAAGCTCCACTCGCCTTGG  Raphanus sativus cv GSK3-1
FY451270       <-- ........................................CTCGCCTTGG  Raphanus sativus cv GSK3-1
FY432376       <-- ..................................................  Raphanus sativus cv GSK3-1
FY448009       <-- ..................................................  Raphanus sativus cv GSK3-1
EW723102       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FY432827       <-- ..................................................  Raphanus sativus cv GSK3-1
FD941274       <-- ..................................................  Raphanus sativus var. oleiformis
FD941040       <-- ..................................................  Raphanus sativus var. oleiformis
FD975772       --> TCAACAGCTTTGATTATCCAGCTTGAGAAATAAAGCTCCACTCGCCTTGG  Raphanus raphanistrum subsp. raphanistrum (NY)
EV544751       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EW727968       --> TCAACTGATTTGATTATCCAGCTTGAGAAATAAAGCTCCACTCGCCTTGG  Raphanus sativus cv Early Scarlet Globe
EY918118       --> ..................................................  Raphanus raphanistrum subsp. landra
EX776083       --> TCAACTGCTCTGATTATCCAGCTTGAGAAATAAAGCTCCACTCGCCTTGG  Raphanus raphanistrum subsp. landra
EV544118       --> TCAACAGCTTTGATTATCCAGCTTGAGAAATAAAGCTCCACTCGCCTTGG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD553647       --> TCAACTGCTCTGATTATCCAGCTTGAGAAATAAAGCTCCACTCGCCTTGG  Raphanus raphanistrum subsp. landra
FY445757       --> TCAACTGCTCTGATTATCCAGCTTGAGAAATAAAGCTCCACTCGCCTTGG  Raphanus sativus cv GSK3-1
FD936950       --> ..................................................  Raphanus sativus var. oleiformis
FD936775       --> ..................................................  Raphanus sativus var. oleiformis
FD575579       --> TCAACTGATTTGATTATACAGCTTGAGAAATAAAGCTCCAC.........  Raphanus sativus cv Early Scarlet Globe

               751    -    801
UN21907        --> CTTATCACGCTTTGGTAGAGTTGGATACGGTACTCCCTTAGTGACAGCAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV549238       <-- ..................................................
EV548449       <-- CTTATCACGCTTTGGTAGAGTTGGATACGGTACTCCCTTAGTCACAGCAT
FD571814       <-- CTTATCACGCTTTGGTAGAGTTGGATACGGAACTCCCTTAGTGACAGCAT
EW716262       <-- CTTATCACGCTTTGGTAGAGTTGGATACGGAACTCCCTTAGTGACAGCAT
FD557568       <-- CTTATCACGCTTTGGTAGAGTTGGATACGGTACTCCCTTAGTGACAGCAT
FY453138       <-- CTTATCACGCTTTGGTAGAGTTGGATACGGTACTCCCTTAGTGACAGCAT
FY444559       <-- CTTATCACGCTTTGGTAGAGTTGGATACGGTACTCCCTTAGTGACAGCAT
EY922086       <-- CTTATCACGCTTTGGTAGAGTTGGGTACGGTACTCCCTTAGTGACAGCAT
FY436141       <-- CTTATCACGCTTTGGTAGAGTTGGATACGGTACTCCCTTAGTGACAGCAT
FY435134       <-- CTTATCACGCTTTGGTAGAGTTGGATACGGTACTCCCTTAGTGACAGCAT
FY449787       <-- CTTATCACGCTTTGGTAGAGTTTGATACGGTACTCCCTTAGTGACAGCAT
FY451281       <-- CTTATCACGCTTTGGTAGAGTTGGATACGGTACTCCCTTAGTGACAGCAT
FY451270       <-- CTTATCACGCTTTGGTAGAGTGAGATACGGTACTCCCTTAGTGACAGCAT
FY432376       <-- .............GGTAGAGTTGGATACGGTACTCCCTTAGTGACAGCAT
FY448009       <-- ......................GGATACGGTACTCCCTTAGTGACAGCAT
EW723102       <-- ..................................................
FY432827       <-- ..................................................
FD941274       <-- ..................................................
FD941040       <-- ..................................................
FD975772       --> CTTATCACGCTTTGGTAGAGTTGG..........................
EV544751       --> ..................................................
EW727968       --> CTTATCACGCTTTGGTAGAGTTGGATACGGAACTCCCTTAGTGACAGCAT
EY918118       --> ..................................................
EX776083       --> CTTATCACGCTTTGGTAGAGTTGGATACGGTACTCCCTTAGTGACAGCAT
EV544118       --> CTTATCACGCTTTGGTAGAGTTGGATACGGTACTCCCTTAGTCACAGCAT
FD553647       --> CTTA..............................................
FY445757       --> CTTATCACGCTTTGGTAGAGTTGGATACGGTACTCCCTTAGTGACAGCAT
FD936950       --> ..................................................
FD936775       --> ..................................................
FD575579       --> ..................................................

               801    -    851
UN21907        --> AATACTTCTTTCCAGATTCCCATATTCTCCTACCAATGATGTACTCCCGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV549238       <-- ..................................................
EV548449       <-- AATACTTCTTTCCAGACCCCCATATTCTACTACCAATGATGTACTCCCGG
FD571814       <-- AATACTTCTTTCCAGATTCCCATATTCTCCTACCAATGc...........
EW716262       <-- AATACTTCTTTCCAGATTCCCATATTCTCCTACCAATGATGTACTCCCGG
FD557568       <-- AATACTTCTTTCCAGATTCCCATATTCTCCTACCAATGATGTACc.....
FY453138       <-- AATACTTCTTTCCAGATTCCCATATTCTCCTACCAATGATGTACTCCCGG
FY444559       <-- AATACTTCTTTCCAGATTCCCATATTCTCCTACCAATGATGTACTCCCGG
EY922086       <-- AATACTTCTTTCCAGATTCCCATATTCTCCTACCAATGATGTACTCCCGG
FY436141       <-- AATACTTCTTTCCAGATTCCCATATTCTCCTACCAATGATGTACTCCCGG
FY435134       <-- AATACTTCTTTCCAGATTCCCATATTCTCCTACCAATGATGTACTCCCGG
FY449787       <-- AATACTTCTTTCCAGATTCCCATATTCTCCTACCAATGATGTACTCCCGG
FY451281       <-- AATACTTCTTTCCAGATTCCCATATTCTCCTACCAATGATGTACTCCCGG
FY451270       <-- AATACTTCTTTCCAGATTCCCATATTCTCCTACCAATGATGTACTCCCGG
FY432376       <-- AATACTTCTTTCCAGATTCCCATATTCTCCTACCAATGATGTACTCCCGG
FY448009       <-- AATACTTCTTTCCAGATTCCCATATCTCCCTACCAATGATGTACTCCCGG
EW723102       <-- .................................CAATGATGTACTCCCGG
FY432827       <-- .........................................TACTCCCGG
FD941274       <-- ..................................................
FD941040       <-- ..................................................
FD975772       --> ..................................................
EV544751       --> ..................................................
EW727968       --> AATACTTCTTTCCAGATTCCCATATTCTCCTACCAATGATGTACT.....
EY918118       --> ..................................................
EX776083       --> AATACTTC..........................................
EV544118       --> AATACTTCTTTCCAGACCCCCATATTCTACTACCAATGATGTACTCCCGG
FD553647       --> ..................................................
FY445757       --> AATACTTCTTTCCAGATTCCCATATTCTCCTACCAATGATGTACTCCCGG
FD936950       --> ..................................................
FD936775       --> ..................................................
FD575579       --> ..................................................

               851    -    901
UN21907        --> TCACTACAGAAAAACGGAAACTTTTTAATCCAGTGAACGATGGTTGTTCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV549238       <-- ..................................................
EV548449       <-- TCACTACAAAAAAACGGAAACTTTTTAATCCAGTGAACTATAGTTGTTCC
FD571814       <-- ..................................................
EW716262       <-- TCACTACAG.........................................
FD557568       <-- ..................................................
FY453138       <-- TCACTACAGAAAAACGGAAACTTTTTAATCCAGTGAACGATGGTTGTTCC
FY444559       <-- TCACTACAGAAAAACGGAAACTTTTTAATCCAGTGAACGATGGTTGTTCC
EY922086       <-- TCACTACAGAAAAACGGAAACTTTTTAATCCAGTGAACGATGGTTGTTCC
FY436141       <-- TCACTACAGAAAAACGGAAACTTTTTAATCCAGTGAACGATGGTTGTTCC
FY435134       <-- TCACTACAGAAAAACGGAAACTTTTTAATCCAGTGAACGATGGTTGTTCC
FY449787       <-- TCACTACAGAAAAACGGAAACTTTTTAATCCAGTGAACGATGGTTGTTCC
FY451281       <-- TCACTACAGAAAAACGGAAACTTTTTAATCCAGTGAACGATGGTTGTTCC
FY451270       <-- TCACTACAGAAAAACGGAAACTTTTTAATCCAGTGAACGATGGTTGTTCC
FY432376       <-- TCACTACAGAAAAACGGAAACTTTTTAATCCAGTGAACGATGGTTGTTCC
FY448009       <-- TCACTACAGAAAAACGGAAACTTTTTAATCCAGTGAACGATGGTTGTTCC
EW723102       <-- TCACTACAGAAAAACGGAAACTTTTTAATCCAGTGAACAATGGTTGTTCC
FY432827       <-- TCACTACAGAAAAACGGAAACTTTTTAATCCAGTGAACGATGGTTGTTCC
FD941274       <-- ..................................................
FD941040       <-- ..................................................
FD975772       --> ..................................................
EV544751       --> ..................................................
EW727968       --> ..................................................
EY918118       --> ..................................................
EX776083       --> ..................................................
EV544118       --> TCACTAC...........................................
FD553647       --> ..................................................
FY445757       --> TCACTAC...........................................
FD936950       --> ..................................................
FD936775       --> ..................................................
FD575579       --> ..................................................

               901    -    951
UN21907        --> TGTCTGAGTATCCTCTTCCAGAGTCTTGAAGTAAGCAAGCATAGGATCCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV549238       <-- ..................................................
EV548449       <-- ..................................................
FD571814       <-- ..................................................
EW716262       <-- ..................................................
FD557568       <-- ..................................................
FY453138       <-- TGTCTGAGTATCCTCTTCCAGAGTCTTGAAGTAAGCAAGCATAGGATCCC
FY444559       <-- TGTCTGAGTATCCTCTTCCAGAGTCTTGAAGTAAGCAAGCATAGGATCCC
EY922086       <-- TGTCTGAGTATCCTCTTCCAAAGTCTTGAAGTAAGCAAGCATAGGATCCC
FY436141       <-- TGTCTGAGTATCCTCTTCCAGAGTCTTGAAG-AAGCAAGCATAGGATCCC
FY435134       <-- TGTCTGAGTATCCTCTTCCAGAGTCTTGAAGTAAGCAAGCATAGGATCCC
FY449787       <-- TGTCTGAGTATCCTCTTCCAGAGTCTTGAAGTAAGCAAGCATAGGATCCC
FY451281       <-- TGTCTGAGTATCCTCTTCCAGAGTCTTGAAGTAAGCAAGCATAGGATCCC
FY451270       <-- TGTCTGAGTATCCTCTTCCAGAGTCTTGAAGTAAGCAAGCATAGGATCCC
FY432376       <-- TGTCTGAGTATCCTCTTCCAGAGTCTTGAAGTAAGCAAGCATAGGATCCC
FY448009       <-- TGTCTGAGTATCCTCTTCCAGAGTCTTGAAGTAAGCAAGCATAGGATCCC
EW723102       <-- TGTCTGAAGATCCTCTTCCAAAGTCTTGAAGTAAGCAAGCATAGGATCCC
FY432827       <-- TGTCTGAGTATCCTCTTCCAGAGTCTTGAAGTAAGCAAGCATAGGATCCC
FD941274       <-- ..................................................
FD941040       <-- ..................................................
FD975772       --> ..................................................
EV544751       --> ..................................................
EW727968       --> ..................................................
EY918118       --> ..................................................
EX776083       --> ..................................................
EV544118       --> ..................................................
FD553647       --> ..................................................
FY445757       --> ..................................................
FD936950       --> ..................................................
FD936775       --> ..................................................
FD575579       --> ..................................................

               951    -   1001
UN21907        --> ATTTAGGTCGAAACTCATCGTCCCAGAAGAAATCCCTAACAATGTCCGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV549238       <-- ..................................................
EV548449       <-- ..................................................
FD571814       <-- ..................................................
EW716262       <-- ..................................................
FD557568       <-- ..................................................
FY453138       <-- ATTTAGGTCGAAACTCATCGTCCCAGAAGAAATCCCTAACAATGTCCGGA
FY444559       <-- ATTTAGGTCGAAACTCATCGTCCCAGAAGAAATCCCTAACAATGTCCGGA
EY922086       <-- ATTTAGGTCGAAACTCATCGTCCCAGAAGAAATCCCTAACAATCTCTGGA
FY436141       <-- ATTTAGGTCGAAACTCATCGTCCCAGAAGAAATCCCTAACAATGTCCGGA
FY435134       <-- ATTTAGGTCGAAACTCATCGTCCCAGAAGAAATCCCTAACAATGTCCGGA
FY449787       <-- ATTTAGGTCGAAACTCATCGTCCCAGAAGAAATCCCTAACAATGTCCGGA
FY451281       <-- ATTTAGGTCGAAACTCATCGTCCCAGAAGAAATCCCTAACAATGTCCGGA
FY451270       <-- ATTTAGGTCGAAACTCATCGTCCCAGAAGAAATCCCTAACAATGTCCGGA
FY432376       <-- ATTTAGGTCGAAACTCATCGTCCCAGAAGAAATCCCTAACAATGTCCGGA
FY448009       <-- ATTTAGGTCGAAACTCATCGTCCCAGAAGAAATCCCTAACAATGTCCGGA
EW723102       <-- ACTTAGGTCGAAACTCATCGTCCCAGAAGAAATCCCTAACAATGTCTGGA
FY432827       <-- ATTTAGGTCGAAACTCATCGTCCCAGAAGAAATCCCTAACAATGTCCGGA
FD941274       <-- ..................................................
FD941040       <-- ..................................................
FD975772       --> ..................................................
EV544751       --> ..................................................
EW727968       --> ..................................................
EY918118       --> ..................................................
EX776083       --> ..................................................
EV544118       --> ..................................................
FD553647       --> ..................................................
FY445757       --> ..................................................
FD936950       --> ..................................................
FD936775       --> ..................................................
FD575579       --> ..................................................

               1001   -   1051
UN21907        --> GTTGCATCCTCGAAAACAGTCCTACTCCGATAAACAACTGGACCTGTCTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV549238       <-- ..................................................
EV548449       <-- ..................................................
FD571814       <-- ..................................................
EW716262       <-- ..................................................
FD557568       <-- ..................................................
FY453138       <-- GTTGCATCCTCGAAAACAGTCCTACTCCGATAAACAACTGGACCTGTCTG
FY444559       <-- GTTGCATCCTCGAAAACAGTCCTACTCCGATAAACAACTGGACCTGTCTG
EY922086       <-- GTTGCATCCTCGAAAACAGTCCTACTCCGATAAACAACAGGACCTGTCTG
FY436141       <-- GTTGCATCCTCGAAAACAGTCCTACTCCGATAAACAACTGGACCTGTCTG
FY435134       <-- GTTGCATCCTCGAAAACAGTCCTACTCCGATAAACAACTGGACCTGTCTG
FY449787       <-- GTTGCATCCTCGAAAACAGTCCTACTCCGATAAACAACTGGACCTGTCTG
FY451281       <-- GTTGCATCCTCGAAAACAGTCCTACTCCGATAAACAACTGGACCTGTCTG
FY451270       <-- GTTGCATCCTCGAAAACAGTCCTACTCCGATAAACAACTGGACCTGTCTG
FY432376       <-- GTTGCATCCTCGAAAACAGTCCTACTCCGATAAACAACTGGACCTGTCTG
FY448009       <-- GTTGCATCCTCGAAAACAGTCCTACTCCGATAAACAACTGGACCTGTCTG
EW723102       <-- GTAGCATCCTCGAAAACAGTCCTACTTCTATAAACAACAGGACCTGTCTG
FY432827       <-- GTTGCATCCTCGAAAACAGTCCTACTCCGATAAACAACTGGACCTGTCTG
FD941274       <-- ...............................AAACAACAGGACCTGTCTG
FD941040       <-- ..................................................
FD975772       --> ..................................................
EV544751       --> ..................................................
EW727968       --> ..................................................
EY918118       --> ..................................................
EX776083       --> ..................................................
EV544118       --> ..................................................
FD553647       --> ..................................................
FY445757       --> ..................................................
FD936950       --> ..................................................
FD936775       --> ..................................................
FD575579       --> ..................................................

               1051   -   1101
UN21907        --> AGGCTCATGACGCCAGGCCTGGTAGCTCATGTTAGGAGTAGATTTATCCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV549238       <-- ..................................................
EV548449       <-- ..................................................
FD571814       <-- ..................................................
EW716262       <-- ..................................................
FD557568       <-- ..................................................
FY453138       <-- AGGCTCATGACGCCAGGCCTGGTAGCTCATGTTAGGAGTAGATTTATCCA
FY444559       <-- AGGCTCATGACGCCAGGCCTGGTAGCTCATGTTAGGAGTAGATTTATCCA
EY922086       <-- AGGCTCATGACGCCAGGCCTGGTAGCTCATGTTAGGAGTAGACTTATCCA
FY436141       <-- AGGCTCATGACGCCAGGCCTGGTAGCTCATGTTAGGAGTAGATTTATCCA
FY435134       <-- AGGCTCATGACGCCAGGCCTGGTAGCTCATGTTAGGAGTAGATTTATCCA
FY449787       <-- AGGCTCATGACGCCAGGCCTGGTAGCTCATGTTAGGAGTAGATTTATCCA
FY451281       <-- AGGCTCATGACGCCAGGCCTGGTAGCTCATGTTAGGAGTAGATTTATCCA
FY451270       <-- AGGCTCATGACGCCAGGCCTGGTAGCTCATGTTAGGAGTAGATTTATCCA
FY432376       <-- AGGCTCATGACGCCAGGCCTGGTAGCTCATGTTAGGAGTAGATTTATCCA
FY448009       <-- AGGCTCATGACGCCAGGCCTGGTAGCTCATGTTAGGAGTAGATTTATCCA
EW723102       <-- AGGCTCATGACGCCAGGCCTGGTAGCTCATGTTAGGAGTAGATTTATCCA
FY432827       <-- AGGCTCATGACGCCAGGCCTGGTAGCTCATGTTAGGAGTAGATTTATCCA
FD941274       <-- AGGCTCATGACGCCAGGCCTGGTAGCTCATGTTAGGAGTAGATTTATCCA
FD941040       <-- ..................................................
FD975772       --> ..................................................
EV544751       --> ..................................................
EW727968       --> ..................................................
EY918118       --> ..................................................
EX776083       --> ..................................................
EV544118       --> ..................................................
FD553647       --> ..................................................
FY445757       --> ..................................................
FD936950       --> ..................................................
FD936775       --> ..................................................
FD575579       --> ..................................................

               1101   -   1151
UN21907        --> TCATAGATTGCCATTCCATATCTGCATTCCCAGCTTCAAGCAGATGCAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV549238       <-- ..................................................
EV548449       <-- ..................................................
FD571814       <-- ..................................................
EW716262       <-- ..................................................
FD557568       <-- ..................................................
FY453138       <-- TCATAGATTGCCATTCCATATCTGCATTCCCAGCTTCAAGCAGATGCAAC
FY444559       <-- TCATAGATTGCCATTCCATATCTGCATTCCCAGCTTCAAGCAGATGCAAC
EY922086       <-- TAATAGACTGCCACTCCATATCTGCGTTCCCAGCTTCAAGCAGATGCAAC
FY436141       <-- TCATAGATTGCCATTCCATATCTGCATTCCCAGCTTCAAGCAGATGCAAC
FY435134       <-- TCATAGATTGCCATTCCATATCTGCATTCCCAGCTTCAAGCAGATGCAAC
FY449787       <-- TCATAGATTGCCATTCCATATCTGCATTCCCAGCTTCAAGCAGATGCAAC
FY451281       <-- TCATAGATTGCCATTCCATATCTGCATTCCCAGCTTCAAGCAGATGCAAC
FY451270       <-- TCATAGATTGCCATTCCATATCTGCATTCCCAGCTTCAAGCAGATGCAAC
FY432376       <-- TCATAGATTGCCATTCCATATCTGCATTCCCAGCTTCAAGCAGATGCAAC
FY448009       <-- TCATAGATTGCCATTCCATATCTGCATTCCCAGCTTCAAGCAGATGCAAC
EW723102       <-- TCATAGATTGCCATTCCATATCTGCATTCCCAGCTTCAAGCAGATGCAAC
FY432827       <-- TCATAGATTGCCATTCCATATCTGCATTCCCAGCTTCAAGCAGATGCAAC
FD941274       <-- TCATAGATTGCCATTCCATATCTGCATTCCCAGCTTCAAGCAGATGCAAC
FD941040       <-- ..................................................
FD975772       --> ..................................................
EV544751       --> ..................................................
EW727968       --> ..................................................
EY918118       --> ..................................................
EX776083       --> ..................................................
EV544118       --> ..................................................
FD553647       --> ..................................................
FY445757       --> ..................................................
FD936950       --> ..................................................
FD936775       --> ..................................................
FD575579       --> ..................................................

               1151   -   1201
UN21907        --> AGATGCTCAAGATCCTTCTCCGTCACAACATCCTTCTTTATTTCTCGGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV549238       <-- ..................................................
EV548449       <-- ..................................................
FD571814       <-- ..................................................
EW716262       <-- ..................................................
FD557568       <-- ..................................................
FY453138       <-- AGATGCTCAA........................................
FY444559       <-- AGATGCTCAAGATCCTTCTCCGTCACAACATCCTTCTTTATTTCTCGGTT
EY922086       <-- AGATGCTCAAGATCCTTCTCCGTCACAACATCCTTCTTTATTTCTCtc..
FY436141       <-- AGATGCTCAAGATCCTTCTCCGTCACAACATCCTTCTTTATTTCTCGGTT
FY435134       <-- AGATGCTCAAGATCCTTCTCCGTCACAACATCCTTCTTTATTTCTCGGTT
FY449787       <-- AGATGCTCAAGATCCTTCTCCGTCACAACATCCTTCTTTATTTCTCGGTT
FY451281       <-- AGATGCTCAAGATCCTTCTCCGTCACAACATCCTTCTTTATTTCTCGGTT
FY451270       <-- AGATGCTCAAGATCCTTCTCCGTCACAACATCCTTCTTTATTTCTCGGTT
FY432376       <-- AGATGCTCAAGATCCTTCTCCGTCACAACATCCTTCTTTATTTCTCGGTT
FY448009       <-- AGATGCTCAAGATCCTTCTCCGTCACAACATCCTTCTTTATTTCTCGGTT
EW723102       <-- AGATGCTCAAGATCCTTCTCCGTCACAACATCCTTCTTTATTTCTCGGTT
FY432827       <-- AGATGCTCAAGATCCTTCTCCGTCACAACATCCTTCTTTATTTCTCGGTT
FD941274       <-- AGATGCTCAAGATCCTTCTCCGTCACAACATCCTTCTTTATTTCTCGGTT
FD941040       <-- ..................................................
FD975772       --> ..................................................
EV544751       --> ..................................................
EW727968       --> ..................................................
EY918118       --> ..................................................
EX776083       --> ..................................................
EV544118       --> ..................................................
FD553647       --> ..................................................
FY445757       --> ..................................................
FD936950       --> ..................................................
FD936775       --> ..................................................
FD575579       --> ..................................................

               1201   -   1251
UN21907        --> TACATCACTAACTCGTATAACTGCCTCACTGGGAGGAATCTCTCCGGTGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV549238       <-- ..................................................
EV548449       <-- ..................................................
FD571814       <-- ..................................................
EW716262       <-- ..................................................
FD557568       <-- ..................................................
FY453138       <-- ..................................................
FY444559       <-- TACATCACTAACTCGTATAACTGCCTCACTGGGAGGAATCTCTCCGGTGG
EY922086       <-- ..................................................
FY436141       <-- TACATCACTAACTCGTATAACTGCCTCACTGGGAGGAATCTCTCCGGTGG
FY435134       <-- TACATCACTAACTCGTATAACTGCCTCACTGGGAGGAATCTCTCCGGTGG
FY449787       <-- TACATCACTAACTCGTATAACTGCCTCACTGGGAGGAATCTCTCCGGTGG
FY451281       <-- TACATCACTAACTCGTATAACTGCCTCACTGGGAGGAATCTCTCCGGTGG
FY451270       <-- TACATCACTAACTCGTATAACTGCCTCACTGGGAGGAATCTCTCCGGTGG
FY432376       <-- TACATCACTAACTCGTATAACTGCCTCACTGGGAGGAATCTCTCCGGTGG
FY448009       <-- TACATCACTAACTCGTATAACTGCCTCACTGGGAGGAATCTCTCCGGTGG
EW723102       <-- TACATCACTAACTCGTATAACTGCCTCACTGGGAGGAATCTCTCCGGTGG
FY432827       <-- TACATCACTAACTCGTATAACTGCCTCACTGGGAGGAATCTCTCCGGTGG
FD941274       <-- TACATCACTAACTCGTATAACTGCCTCACTGGGAGGAATCTCTCCGGTGG
FD941040       <-- .............CGTATAACTGCCTCACTGGGAGGAATCTCTCCGGTGG
FD975772       --> ..................................................
EV544751       --> ..................................................
EW727968       --> ..................................................
EY918118       --> ..................................................
EX776083       --> ..................................................
EV544118       --> ..................................................
FD553647       --> ..................................................
FY445757       --> ..................................................
FD936950       --> ..................................................
FD936775       --> ..................................................
FD575579       --> ..................................................

               1251   -   1301
UN21907        --> ATTTCTTGGAACTTGAACCGAGCCTTGACCATAAGGTGCGGCAGACGGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV549238       <-- ..................................................
EV548449       <-- ..................................................
FD571814       <-- ..................................................
EW716262       <-- ..................................................
FD557568       <-- ..................................................
FY453138       <-- ..................................................
FY444559       <-- ATTTCTTGGAACTTGAACCGAGCCTTGACCATAAGGTGCGGCAGACGGAG
EY922086       <-- ..................................................
FY436141       <-- ATTTCTTGGAACTTGAACCGAGCCTTGACCATAAGGTGCGGCAGACGGAG
FY435134       <-- ATTTCTTGGAACTTGAACCGAGCCTTGACCATAAGGTGCGGCAGACGGAG
FY449787       <-- ATTTCTTGGAACTTGAACCGAGCCTTGACCATAAGGTGCGGCAGACGGAG
FY451281       <-- ATTTCTTGGAACTTGAACCGAGCCTTGACCATAAGGTGCGGCAGACGGAG
FY451270       <-- ATTTCTTGGAACTTGAACCGAGCCTTGACCATAAGGTGCGGCAGACGGAG
FY432376       <-- ATTTCTTGGAACTTGAACCGAGCCTTGACCATAAGGTGCGGCAGACGGAG
FY448009       <-- ATTTCTTGGAACTTGAACCGAGCCTTGACCATAAGGTGCGGCAGACGGAG
EW723102       <-- ATTTCTTGGAACTTGAACCGAGCCTTGACCATAAGGTGCGGCAGACGGAG
FY432827       <-- ATTTCTTGGAACTTGAACCGAGCCTTGACCATAAGGTGCGGCAGACGGAG
FD941274       <-- ATTTCTTGGAACTTGAACCGAGCCTTGACCATAAGGTGCGGCAGACGGAG
FD941040       <-- ATTTCTTGGAACTTGAACCGAGCCTTGACCATAAGGTGCGGCAGACGGAG
FD975772       --> ..................................................
EV544751       --> ..................................................
EW727968       --> ..................................................
EY918118       --> ..................................................
EX776083       --> ..................................................
EV544118       --> ..................................................
FD553647       --> ..................................................
FY445757       --> ..................................................
FD936950       --> ..................................................
FD936775       --> ..................................................
FD575579       --> ..................................................

               1301   -   1351
UN21907        --> AAGGCGGAGAGAGCGGTGAAGGCAAGCCAGACGCGGCGAGCGCCGAACCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV549238       <-- ..................................................
EV548449       <-- ..................................................
FD571814       <-- ..................................................
EW716262       <-- ..................................................
FD557568       <-- ..................................................
FY453138       <-- ..................................................
FY444559       <-- AAGGCG............................................
EY922086       <-- ..................................................
FY436141       <-- AAGGCGGAGAGAGCGGTGAAGGCAAGCCAGACGCGGCGAGCGCCGAACCC
FY435134       <-- AAGGCGGAGAGAGCGGTGAAGGCAAGCCAGACGCGGCGAGCGCCGAACCC
FY449787       <-- AAGGCGGAGAGAGCGGTGAAGGCAAGCCAGACGCGGCGAGCGCCGAACCC
FY451281       <-- AAGGCGGAGAGAGCGGTGAAGGCAAGCCAGACGCGGCGAGCGCCGAACCC
FY451270       <-- AAGGCGGAGAGAGCGGTGAAGGCAAGCCAGACGCGGCGAGCGCCGAACCC
FY432376       <-- AAGGCGGAGAGAGCGGTGAAGGCAAGCCAGACGCGGCGAGCGCCGAACCC
FY448009       <-- AAGGCGGAGAGAGCGGTGAAGGCAAGCCAGACGCGGCGAGCGCCGAACCC
EW723102       <-- AAGGCGGAGAGAGCGGTGAAGGCAAGCCAGACGCGGCGAGCGCCGAACCC
FY432827       <-- AAGGCGGAGAGAGCGGTGAAGGCAAGCCAGACGCGGCGAGCGCCGAACCC
FD941274       <-- AAGGCGGAGAGAGCGGTGAAGGCAAGCCAGACGCGGCGAGCGCCGAACCC
FD941040       <-- AAGGCGGAGAGAGCGGTGAAGGCAAGCCAGACGCGGCGAGCGCCGAACCC
FD975772       --> ..................................................
EV544751       --> ..................................................
EW727968       --> ..................................................
EY918118       --> ..................................................
EX776083       --> ..................................................
EV544118       --> ..................................................
FD553647       --> ..................................................
FY445757       --> ..................................................
FD936950       --> ..................................................
FD936775       --> ..................................................
FD575579       --> ..................................................

               1351   -   1401
UN21907        --> GGGAGGAGCGGTCCAGAGAAACCGGAGCTTGGAACGGAACCCTAGGTAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV549238       <-- ..................................................
EV548449       <-- ..................................................
FD571814       <-- ..................................................
EW716262       <-- ..................................................
FD557568       <-- ..................................................
FY453138       <-- ..................................................
FY444559       <-- ..................................................
EY922086       <-- ..................................................
FY436141       <-- GGGAGGAGCGGTCCAGAGAAACCGGAGCTTGGAACGGAACCCTAGGTAAA
FY435134       <-- GGGAGGAGCGGTCCAGAGAAACCGGAGCTTGGAACGGAACCCTAGGTAAA
FY449787       <-- GGGAGGAGCGGTCCAGAGAAACCGGAGCTTGGAACGGAACCCTAGGTAAA
FY451281       <-- GGGAGGAGCGGTCCAGAGAAACCGGAGCTTGGAACGGAACCCTAGGTAAA
FY451270       <-- GGGAGGAGCGGTCCAGAGAAACCGGAGCTTGGAACGGAACCCTAGGTAAA
FY432376       <-- GGGAGGAGCGGTCCAGAGAAACCGGAGCTTGGAACGGAACCCTAGGTAAA
FY448009       <-- GGGAGGAGCGGTCCAGAGAAACCGGAGCTTGGAACGGAACCCTAGGTAAA
EW723102       <-- GGGAGGAGCGGTCCAGAGAAACCGGAGCTTGGAACGGAACCCTAGGTAAA
FY432827       <-- GGGAGGAGCGGTCCAGAGAAACCGGAGCTTGGAACGGAACCCTAGGTAAA
FD941274       <-- GGGAGGAGCGGTCCAGAGAAACCGGAGCTTGGAACGGAACCCTAGGTAAA
FD941040       <-- GGGAGGAGCGGTCCAGAGAAACCAGAGCTTGGAACGGAACCCTAGGTAAA
FD975772       --> ..................................................
EV544751       --> ..................................................
EW727968       --> ..................................................
EY918118       --> ..................................................
EX776083       --> ..................................................
EV544118       --> ..................................................
FD553647       --> ..................................................
FY445757       --> ..................................................
FD936950       --> ..................................................
FD936775       --> ..................................................
FD575579       --> ..................................................

               1401   -   1451
UN21907        --> CCAATCCGGTCCACCTAGGACGCCAGGACCATCCGATCAGAAGCCCGATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV549238       <-- ..................................................
EV548449       <-- ..................................................
FD571814       <-- ..................................................
EW716262       <-- ..................................................
FD557568       <-- ..................................................
FY453138       <-- ..................................................
FY444559       <-- ..................................................
EY922086       <-- ..................................................
FY436141       <-- CCAATCCGGTCCACCTAGGACGCCAGGACCATCCGATCAGAAGCCCGATC
FY435134       <-- CCAATCCGGTCCACCTAGGACGCCAGGACCATCCGATCAGAAGCCCGATC
FY449787       <-- CCAATCCGGTCCACCTAGGACGCCAGGACCATCCGATCAGAAGCCCGATC
FY451281       <-- CCAATCCGGTCCACCTAGGACGCCAGGACCATCCGATCAGAAGCCCGATC
FY451270       <-- CCAATCCGGTCCACCTAGGACGCCAGGACCATCCGATCAGAAGCCCGATC
FY432376       <-- CCAATCCGGTCCACCTAGGACGCCAGGACCATCCGATCAGAAGCCCGATC
FY448009       <-- CCAATCCGGTCCACCTAGGACGCCAGGACCATCCGATCAGAAGCCCGATC
EW723102       <-- CCAATCCGGTCCACCTAGGACGCCAGGACCATCCGATCAGAAGCCCGATC
FY432827       <-- CCAATCCGGTCCACCTAGGACGCCAGGACCATCCGATCAGAAGCCCGATC
FD941274       <-- CCAATCCGGTCCACCTAGGACGCCAGGACCATCCGATCAGAAGCCCGATC
FD941040       <-- CCAATCCGGTCCACCTAGGACGCCAGGACCATCCGATCAGAAGCCCGATC
FD975772       --> ..................................................
EV544751       --> ..................................................
EW727968       --> ..................................................
EY918118       --> ..................................................
EX776083       --> ..................................................
EV544118       --> ..................................................
FD553647       --> ..................................................
FY445757       --> ..................................................
FD936950       --> ..................................................
FD936775       --> ..................................................
FD575579       --> ..................................................

               1451   -   1501
UN21907        --> ATGACGGCGAGCCAAATCGGAACTGCGCATAGCAAGATGTCGACGAATGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV549238       <-- ..................................................
EV548449       <-- ..................................................
FD571814       <-- ..................................................
EW716262       <-- ..................................................
FD557568       <-- ..................................................
FY453138       <-- ..................................................
FY444559       <-- ..................................................
EY922086       <-- ..................................................
FY436141       <-- ATGACGGCGAGCCAAATCGGAACTGCGCATAGCAAGATGTCGACGAATGT
FY435134       <-- ATGACGGCGAGCCAAATCGGAACTGCGCATAGCAAGATGTCGACGAATGT
FY449787       <-- ATGACGGCGAGCCAAATCGGAACTGCGCATAGCAAGATGTCGACGAATGT
FY451281       <-- ATGACGGCGAGCCAAATCGGAACTGCGCATAGCAAGATGTCGACGAATGT
FY451270       <-- ATGACGGCGAGCCAAATCGGAACTGCGCATAGCAAGATGTCGACGAATGT
FY432376       <-- ATGACGGCGAGCCAAATCGGAACTGCGCATAGCAAGATGTCGACGAATGT
FY448009       <-- ATGACGGCGAGCCAAATCGGAACTGCGCATAGCAAGATGTCGACGAATGT
EW723102       <-- ATGACGGCGAGCCAAATCGGAACTGCGCATAGCAAGATGTCGACGAATGT
FY432827       <-- ATGACGGCGAGCCAAATCGGAACTGCGCATAGCAAGATGTCGACGAATGT
FD941274       <-- ATGACGGCGAGCCAAATCGGAACTGCGCATAGCAAGATGTCGACGAATGT
FD941040       <-- ATGACGGCGAGCCAAATCGGAACTGCGCATAGCAAGATGTCGACGAATGT
FD975772       --> ..................................................
EV544751       --> ..................................................
EW727968       --> ..................................................
EY918118       --> ..................................................
EX776083       --> ..................................................
EV544118       --> ..................................................
FD553647       --> ..................................................
FY445757       --> ..................................................
FD936950       --> ..................................................
FD936775       --> ..................................................
FD575579       --> ..................................................

               1501   -   1551
UN21907        --> CTCTGAAAGAGAGGTTCTCCGGATCAAATCCGTTAGATTCCGATACGATT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV549238       <-- ..................................................
EV548449       <-- ..................................................
FD571814       <-- ..................................................
EW716262       <-- ..................................................
FD557568       <-- ..................................................
FY453138       <-- ..................................................
FY444559       <-- ..................................................
EY922086       <-- ..................................................
FY436141       <-- CTCTGAAAGAGAGGTTCTCCGGATCAAATCCGTTAGATTCCGATACGATT
FY435134       <-- CTCTGAAAGAGAGGTTCTCCGGATCAAATCCGTTAGATTCCGATACGATT
FY449787       <-- CTCTGAAAGAGAGGTTCTCCGGATCAAATCCGTTAGATTCCGATACGATT
FY451281       <-- CTCTGAAAGAGAGGTTCTCCGGATCAAATCCGTTAGATTCCGATACGATT
FY451270       <-- CTCTGAAAGAGAGGTTCTCCGGATCAAATCCGTTAGATTCCGATACGATT
FY432376       <-- CTCTGAAAGAGAGGTTCTCCGGATCAAATCCGTTAGATTCCGATACGATT
FY448009       <-- CTCTGAAAGAGAGGTTCTCCGGATCAAATCCGTTAGATTCCGATACGATT
EW723102       <-- CTCTGAAAGAGAGGTTCTCC..............................
FY432827       <-- CTCTGAAAGAGAGGTTCTCCGGATCAAATCCGTTAGATTCCGATACGATT
FD941274       <-- CTCTGAAAGAGAGGTTCTCCGGATCAAATCCGTTAGATTCCGATACGATT
FD941040       <-- CTCTGAAAGAGAGGTTCTCCGGATCAAATCCGTTAGATTCCGATACGATT
FD975772       --> ..................................................
EV544751       --> ..................................................
EW727968       --> ..................................................
EY918118       --> ..................................................
EX776083       --> ..................................................
EV544118       --> ..................................................
FD553647       --> ..................................................
FY445757       --> ..................................................
FD936950       --> ..................................................
FD936775       --> ..................................................
FD575579       --> ..................................................

               1551   -   1601
UN21907        --> CGTCCATAACTGTCCTGAAACGGAGTTTTTAGATTCCTCTGTTCCCAGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV549238       <-- ..................................................
EV548449       <-- ..................................................
FD571814       <-- ..................................................
EW716262       <-- ..................................................
FD557568       <-- ..................................................
FY453138       <-- ..................................................
FY444559       <-- ..................................................
EY922086       <-- ..................................................
FY436141       <-- CGTCCATAACTGTCC-GAAACGGAGTTT......................
FY435134       <-- CGTCCATAACTG......................................
FY449787       <-- C.................................................
FY451281       <-- CGTCCATAACTGTC....................................
FY451270       <-- CGTCCATAACTG......................................
FY432376       <-- CGTCCAT...........................................
FY448009       <-- CGTCCATAACTGTCCTGAAACGGA..........................
EW723102       <-- ..................................................
FY432827       <-- CGTCCATAACTGTCCTGAAACGGAGTTTTTAGATTCCTCTGTTCGAAGAA
FD941274       <-- CGTCCATAACTGTCCTGAAACGGAGTTTTTAGATTCCTCTGTTCCC....
FD941040       <-- CGTCCATAACTGTCCTGAAACGGAGTTTTTAGATTCCTCTGTTCCC....
FD975772       --> ..................................................
EV544751       --> ..................................................
EW727968       --> ..................................................
EY918118       --> ..................................................
EX776083       --> ..................................................
EV544118       --> ..................................................
FD553647       --> ..................................................
FY445757       --> ..................................................
FD936950       --> ..................................................
FD936775       --> ..................................................
FD575579       --> ..................................................

               1601   -   1651
UN21907        --> GGAAGGAAGGAGAAAGCAGTTTCCACCTTATTTATTTTGAATTAATTTGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV549238       <-- ..................................................
EV548449       <-- ..................................................
FD571814       <-- ..................................................
EW716262       <-- ..................................................
FD557568       <-- ..................................................
FY453138       <-- ..................................................
FY444559       <-- ..................................................
EY922086       <-- ..................................................
FY436141       <-- ..................................................
FY435134       <-- ..................................................
FY449787       <-- ..................................................
FY451281       <-- ..................................................
FY451270       <-- ..................................................
FY432376       <-- ..................................................
FY448009       <-- ..................................................
EW723102       <-- ..................................................
FY432827       <-- GGAAGGAAGGAGAAAGCAGTTTCCACCTTATTTATTTTGAATTAATTTGG
FD941274       <-- ..................................................
FD941040       <-- ..................................................
FD975772       --> ..................................................
EV544751       --> ..................................................
EW727968       --> ..................................................
EY918118       --> ..................................................
EX776083       --> ..................................................
EV544118       --> ..................................................
FD553647       --> ..................................................
FY445757       --> ..................................................
FD936950       --> ..................................................
FD936775       --> ..................................................
FD575579       --> ..................................................

               1651   -   1701
UN21907        --> CTGACTCAGAGAAATTTAATAAAATT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~
EV549238       <-- ..........................
EV548449       <-- ..........................
FD571814       <-- ..........................
EW716262       <-- ..........................
FD557568       <-- ..........................
FY453138       <-- ..........................
FY444559       <-- ..........................
EY922086       <-- ..........................
FY436141       <-- ..........................
FY435134       <-- ..........................
FY449787       <-- ..........................
FY451281       <-- ..........................
FY451270       <-- ..........................
FY432376       <-- ..........................
FY448009       <-- ..........................
EW723102       <-- ..........................
FY432827       <-- CTGACTCAGAGAAATTTAATAAAATT
FD941274       <-- ..........................
FD941040       <-- ..........................
FD975772       --> ..........................
EV544751       --> ..........................
EW727968       --> ..........................
EY918118       --> ..........................
EX776083       --> ..........................
EV544118       --> ..........................
FD553647       --> ..........................
FY445757       --> ..........................
FD936950       --> ..........................
FD936775       --> ..........................
FD575579       --> ..........................