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Alignment for radish unigene UN21928

               1      -     51
UN21928        --> CAATATCACTAAACTCAATTCTAAGCTTATTGTTACAAGGAGCTGGTTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD550092       <-- ..................................................
EW732524       <-- ..................................................
EW732228       <-- ..................................................
EY947116       <-- ..................................................
FY429475       <-- ..................................................
FD549930       <-- ..................................................
FD564358       <-- ..................................................
FD956613       <-- ..................................................
EY945810       <-- ..................................................
FD552138       <-- ..................................................
FD556500       <-- ..................................................
FD979872       <-- ..................................................
FD561699       <-- ..................................................
FD578632       <-- ..................................................
FD580234       <-- ..................................................
EW717045       <-- ..................................................
FD561381       <-- ..................................................
FD972357       <-- ..................................................
EV537834       <-- ..................................................
FD964888       <-- ..................................................
EX903787       <-- ..................................................
FD564194       <-- ..................................................
FD573758       --> CAATATCACTAAACTCAATTCTAAGCTTATTGTTACAAGGAGCTGGTTCT
FD565560       --> ..................................................
FD538860       --> ..................................................
EV573474       --> ..................................................
FD547965       --> ..................................................
FD975845       --> ..................................................
EY942015       --> ..................................................
FD546082       --> ..................................................
FD567737       --> ..................................................
FD967248       --> ..................................................
EX753470       --> ..................................................
FD531681       --> ..................................................
EW737001       --> ..................................................
FD968086       --> ..................................................
EW720644       --> ..................................................
EX759525       --> ..................................................
FD545941       --> ..................................................
FD968262       --> ..................................................
EX907789       --> ..................................................
FD567862       --> ..................................................
EW736633       --> ..................................................

               51     -    101
UN21928        --> CAAACAGGATGCTTCTAGGAGAGAGTATCAATGGTTCAAGCGAATCTCGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD550092       <-- ..................................................
EW732524       <-- ..................................................
EW732228       <-- ..................................................
EY947116       <-- ..................................................
FY429475       <-- ..................................................
FD549930       <-- ..................................................
FD564358       <-- ..................................................
FD956613       <-- ..................................................
EY945810       <-- ..................................................
FD552138       <-- ..................................................
FD556500       <-- ..................................................
FD979872       <-- ..................................................
FD561699       <-- ..................................................
FD578632       <-- ..................................................
FD580234       <-- ..................................................
EW717045       <-- ..................................................
FD561381       <-- ..................................................
FD972357       <-- ..................................................
EV537834       <-- ..................................................
FD964888       <-- ..................................................
EX903787       <-- ..................................................
FD564194       <-- ..................................................
FD573758       --> CAAACAGGATGCTTCTAGGAGAGAGTATCAATGGTTCAAGCGAATCTCGT
FD565560       --> ................................GGTTCAAGCGAATCTCGT
FD538860       --> .......................................GCGAATCTCGT
EV573474       --> ..................................................
FD547965       --> ..................................................
FD975845       --> ..................................................
EY942015       --> ..................................................
FD546082       --> ..................................................
FD567737       --> ..................................................
FD967248       --> ..................................................
EX753470       --> ..................................................
FD531681       --> ..................................................
EW737001       --> ..................................................
FD968086       --> ..................................................
EW720644       --> ..................................................
EX759525       --> ..................................................
FD545941       --> ..................................................
FD968262       --> ..................................................
EX907789       --> ..................................................
FD567862       --> ..................................................
EW736633       --> ..................................................

               101    -    151
UN21928        --> GTGCTTAACTGAGCAGGTATTATATCCAGACTAGACACATCTTATCTTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD550092       <-- ..................................................
EW732524       <-- ..................................................
EW732228       <-- ..................................................
EY947116       <-- ..................................................
FY429475       <-- ..................................................
FD549930       <-- ..................................................
FD564358       <-- ..................................................
FD956613       <-- ..................................................
EY945810       <-- ..................................................
FD552138       <-- ..................................................
FD556500       <-- ..................................................
FD979872       <-- ..................................................
FD561699       <-- ..................................................
FD578632       <-- ..................................................
FD580234       <-- ..................................................
EW717045       <-- ..................................................
FD561381       <-- ..................................................
FD972357       <-- ..................................................
EV537834       <-- ..................................................
FD964888       <-- ..................................................
EX903787       <-- ..................................................
FD564194       <-- ..................................................
FD573758       --> GTGCTTAACTGAGCAGGTATTATATCCAGACTAGACACATCTTATCTTTG
FD565560       --> GTGCTTAACTGGGCAGGTATTATATCCAGACTAGACACATCTTATCTTTG
FD538860       --> GTGCTTAACTGAGCAGGTATTATGTCCAGACTAGACACATCTTATCTTTG
EV573474       --> .......................ATCCAGACTAAACACATCTTATCTTTG
FD547965       --> .......................ATCCAGACTAGACACATCTTATCTTTG
FD975845       --> ...........................................tttTTTG
EY942015       --> ................................................cG
FD546082       --> .................................................G
FD567737       --> .................................................G
FD967248       --> .................................................G
EX753470       --> ..................................................
FD531681       --> .................................................g
EW737001       --> ..................................................
FD968086       --> ..................................................
EW720644       --> ..................................................
EX759525       --> ..................................................
FD545941       --> ..................................................
FD968262       --> ..................................................
EX907789       --> ..................................................
FD567862       --> ..................................................
EW736633       --> ..................................................

               151    -    201
UN21928        --> GAATCCTGTAAACAGCACCCTGGTTCTCAATTATCTCTAGTACTTTATTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD550092       <-- .AATCCTGTAAACAGCACCCTGGTTCTCAATTATCTATAGTACTTTATTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EW732524       <-- .........AAACAGCACCCTGGTTCTCAATTATCTCTAGTACTTTATTT  Raphanus sativus cv Rat-Tail Radish #3870
EW732228       <-- ......................GTTCTCAATTATCTCTAGTACTTTATTT  Raphanus sativus cv Rat-Tail Radish #3870
EY947116       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FY429475       <-- ..................................................  Raphanus sativus cv GSK3-1
FD549930       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD564358       <-- ..................................................  Raphanus sativus var. oleiformis
FD956613       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY945810       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD552138       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD556500       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD979872       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD561699       <-- ..................................................  Raphanus sativus var. oleiformis
FD578632       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD580234       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EW717045       <-- ..................................................  Raphanus sativus var. oleiformis
FD561381       <-- ..................................................  Raphanus sativus var. oleiformis
FD972357       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV537834       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD964888       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EX903787       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD564194       <-- ..................................................  Raphanus sativus var. oleiformis
FD573758       --> GAATCCTGTAAACAGCACCCTGGTTCTCAATTATCTCTAGTACTTTATTT  Raphanus sativus cv Early Scarlet Globe
FD565560       --> GAATCCTGTAAACAGCACCCTGGTTCTCAATTATCTCTAGTACTTTATTT  Raphanus sativus var. oleiformis
FD538860       --> GAATCCTGTAAACAGCACCCTGGTTCTCAATTATCTCTAGTACTTTATTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV573474       --> GAATCCTGTAAACAGCACCCTGGTTCTCAATTATCTCTAGTACTTTATTT  Raphanus raphanistrum subsp. landra
FD547965       --> GAATCCTGTAAACAGCACCCTGGTTCTCAATTATCTATAGTACTTTATTT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD975845       --> GAATCCTGTAAACAGCACCCTGGTTCTCAATTATCTATAGTACTTTATTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY942015       --> GAATCCTGTAAACAGCACCCTGGTTCTCAATTATCTCTAGTACTTCATTT  Raphanus sativus cv Rat-Tail Radish #3870
FD546082       --> GAATCCTGTAAACAGCACCCTGGTTCTCAATTATCTATAGTACTTTATTT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD567737       --> GAATCCTGTAAACAGCACCCTGGTTCTCAATTATCTCTAGTACTTTATTT  Raphanus sativus var. oleiformis
FD967248       --> GAATCCTGTAAACAGCACCCTGGTTCTCAATTATCTCTAGTACTTTATTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX753470       --> .AATACTGTAAACAGCATCCTGGTTCTCAATTATCTCTAGTAATTTATTT  Raphanus raphanistrum subsp. maritimus
FD531681       --> tAATACTGTAAACAGCATCCTGGTTCTCAATTATCTCTAGTAATTTATTT  Raphanus raphanistrum subsp. maritimus
EW737001       --> ........TAAACAGCACCCTGGTTCTCAATTATCTCTAGTACTTTATTT  Raphanus sativus cv Rat-Tail Radish #3870
FD968086       --> .........AAACAGCACCCTGGTTCTCAATTATCTCTAGTACTTTATTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EW720644       --> .....................GGTTCTCAATTATCTCTAGTACTTTATTT  Raphanus sativus var. oleiformis
EX759525       --> .....................GGTTCTCAATTATCTCTAGTACTTTATTT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD545941       --> .....................GGTTCTCAATTATCTATAGTACTTTATTT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD968262       --> .....................GGTTCTCAATTATCTCTAGTACTTTATTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX907789       --> .....................aGTTCTCAATTATCTCTAGTACTTTATTT  Raphanus sativus cv Rat-Tail Radish #3870
FD567862       --> .........................gTCAATTATCTCTAGTACTTTATTT  Raphanus sativus var. oleiformis
EW736633       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870

               201    -    251
UN21928        --> CACATTGGTAATTATTTTAGCTGCGCTATTGCAGATTGTCATATAGAGAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD550092       <-- CACATTGGTAATTATTTTAGCTGCGCTATTGCAGATTGTCATATAGAGAC
EW732524       <-- CACATTGGTAATTATTTTAGCTGCGCTATTGCAGATTGTCATATAGAGAC
EW732228       <-- CACATTGGTAATTATTTTAGCTGCGCTATTGCAGATTGTCATATAGAGAC
EY947116       <-- ..................................................
FY429475       <-- ..................................................
FD549930       <-- ..................................................
FD564358       <-- ..................................................
FD956613       <-- ..................................................
EY945810       <-- ..................................................
FD552138       <-- ..................................................
FD556500       <-- ..................................................
FD979872       <-- ..................................................
FD561699       <-- ..................................................
FD578632       <-- ..................................................
FD580234       <-- ..................................................
EW717045       <-- ..................................................
FD561381       <-- ..................................................
FD972357       <-- ..................................................
EV537834       <-- ..................................................
FD964888       <-- ..................................................
EX903787       <-- ..................................................
FD564194       <-- ..................................................
FD573758       --> CACATTGGTAATTATTTTAGCTGCGCTATTGCAGATTGTCATATAGAGAC
FD565560       --> CACATTGGTAATTATTTTAGCTGCGCTATTGCAGATTGTCATATAGAGAC
FD538860       --> CACATTGGTAATTATTTTAGCTGCGCTATTGCAGATTGTCATATAGAGAC
EV573474       --> CACATTGGTAATTATTTTAGCTACCCTATTGCAAATTGTCATATAGAGAC
FD547965       --> CACATTGGTAATTATTTTAGCTGCGCTATTGCAGATTGTCATATAGAGAC
FD975845       --> CACATTGGTAATTATTTTAGCTGCGCTATTGCAGATTGTCATATAGAGAC
EY942015       --> CCCATTGGTAATTATTTTAGCTGCGCTATTGCAGATTGTCATATAGAGAC
FD546082       --> CACATTGGTAATTATTTTAGCTGCGCTATTGCAGATTGTCATATAGAGAC
FD567737       --> CACATTGGTAATTATTTTAGCTGCGCTATTGCAAATTGTCATATAGAGAC
FD967248       --> CACATTGGTAATTATTTTAGCTGCGCTATTGCAGATTGTCATATAGAGAC
EX753470       --> CACAATCGTAATTATTTTAGCTGCGCTATTGCAGATTGTCATACAGAGAG
FD531681       --> CACAATCGTAATTATTTTAGCTGCGCTATTGCAGATTGTCATACAGAGAG
EW737001       --> CACATTGGTAATTATTTTAGCTGCGCTATTGCAGATTGTCATATAGAGAC
FD968086       --> CACATTGGTAATTATTTTAGCTGCGCTATTGCAGATTGTCATATAGAGAC
EW720644       --> CGCATTGGTAATTATTTTAGCTGCGCTATTGCAGATTGTCATATAGAGAC
EX759525       --> CACATTGGTAATTATTTTAGCTGCGCTATTGCAGATTGTCATATAGAGAC
FD545941       --> CACATTGGTAATTATTTTAGCTGCGCTATTGCAGATTGTCATATAGAGAC
FD968262       --> CACATTGGTAATTATTTTAGCTGCGCTATTGCAGATTGTCATATAGAGAC
EX907789       --> CACATTGGTAATTATTTTAGCTGCGCTATTGCAGATTGTCATATAGAGAC
FD567862       --> CACATTGGTAATTATTTTAGCTGCGCTATTGCAGATTGTCATATAGAGAC
EW736633       --> .......................................CATATAGAGAC

               251    -    301
UN21928        --> AATTTTCATGTTAATTCTCTGTTAACGAAAAAGAAAAGGCTCTCTTAATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD550092       <-- AATTTTCATGTTAATTCTCTGTTAACGAAAAAGAAAAGGCTCTCTTAATC
EW732524       <-- AATTTTCATGTTAATTCTCTGTTAACGAAAAAGAGAAGGCTCTCTTAATC
EW732228       <-- AATTTTCATGTTAATTCTCTGTTAACGAAAAAGAGAAGGCTCTCTTAATC
EY947116       <-- ..................................................
FY429475       <-- ..................................................
FD549930       <-- ..................................................
FD564358       <-- ..................................................
FD956613       <-- ..................................................
EY945810       <-- ..................................................
FD552138       <-- ..................................................
FD556500       <-- ..................................................
FD979872       <-- ..................................................
FD561699       <-- ..................................................
FD578632       <-- ..................................................
FD580234       <-- ..................................................
EW717045       <-- ..................................................
FD561381       <-- ..................................................
FD972357       <-- ..................................................
EV537834       <-- ..................................................
FD964888       <-- ..................................................
EX903787       <-- ..................................................
FD564194       <-- ..................................................
FD573758       --> AATTTTCATGTTAATTCTCTGTTAACGAAAAAAAAAAGGCTCTCTTAATC
FD565560       --> AATTTTCATGTTAATTCTCTGTTAACGAAAAAAAAAAGGCTCTCTTAATC
FD538860       --> AATTTTCATGTTAATTCTCTGTTAACGAAAAAGAAAAGGCTCTCTTAATC
EV573474       --> AATTTTCATGTTAATTCTCTGTTAACGAAAAAAAAAAGGCTCTCTTAATC
FD547965       --> AATTTTCATGTTAATTCTCTGTTAACGAAAAAGAAAAGGCTCTCTTAATC
FD975845       --> AATTTTCATGTTAATTCTCTGTTAACGAAAAAGAAAAGGCTCTCTTAATC
EY942015       --> AATTTTCATGTTAATTCTCTGTTAACGAAAAAAAAAAGGCTCTCTTAATC
FD546082       --> AATTTTCATGTTAATTCTCTGTTAACGAAAAAAAAAAGGCTCTCTTAATC
FD567737       --> AATTTTCATGTTAATTCTCTGTTAACGAAAAAAAAAAGGCTCTCTTAATC
FD967248       --> AATTTTCATGTTAATTCTCTGTTAACGAAAAAGAAAAGGCTCTCTTAATC
EX753470       --> AATTTTCATATTAATT-TCTGTTAACGAAAAAGAAAAGGCTCTCTTAATC
FD531681       --> AATTTTCATATTAATT-TCTGTTAACGAAAAAAAAAAGGCTCTCTTAATC
EW737001       --> AATTTTCATGTTAATTCTCTGTTAACGAAAAAGAGAAGGCTCTCTTAATC
FD968086       --> AATTTTCATGTTAATTCTCTGTTAACGAAAAAGAAAAGGCTCTCTTAATC
EW720644       --> AATTTTCATGTTAATTCTCTGTTAACGAAAAAGAAAAGGCTCTCTTAATC
EX759525       --> AATTTTCATGTTAATTCTCTGTTAACGAAAAAGAAAAGGCTCTCTTAATC
FD545941       --> AATTTTCATGTTAATTCTCTGTTAACGAAAAAGAAAAGGCTCTCTTAATC
FD968262       --> AATTTTCATGTTAATTCTCTGTTAACGAAAAAGAAAAGGCTCTCTTAATC
EX907789       --> AATTTTCATGTTAATTCTCTGTTAACGAAAAAGAAAAGGCTCTCTTAATC
FD567862       --> AATTTTCATGTTAATTCTCTGTTAACGAAAAAAAAAAGGCTCTCTTAATC
EW736633       --> AATTTTCATGTTAATTCTCTGTTAACGAAAAAGAGAAGGCTCTCTTAATC

               301    -    351
UN21928        --> TTCTGGAGTT-C-GTGGACTCACTGCAAGGGATAGCTCGCCAGCATAGTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD550092       <-- TTCTGGAGTT-CCGTGGACTCACTGCAAGGGATAGCTCGCCAGCATAGTA  Raphanus raphanistrum subsp. raphanistrum (NY)
EW732524       <-- TTCTGGAGTT-C-GTGGACTCACTGCAAGGGATAGCTCGCCAGCATAGTA  Raphanus sativus cv Rat-Tail Radish #3870
EW732228       <-- TTCTGGAGTT-C-GTGGACTCACTGCAAGGGATAGCTCGCCAGCATAGTA  Raphanus sativus cv Rat-Tail Radish #3870
EY947116       <-- ......................................GCCAGCATAGTA  Raphanus sativus cv Rat-Tail Radish #3870
FY429475       <-- ..................................................  Raphanus sativus cv GSK3-1
FD549930       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD564358       <-- ..................................................  Raphanus sativus var. oleiformis
FD956613       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY945810       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD552138       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD556500       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD979872       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD561699       <-- ..................................................  Raphanus sativus var. oleiformis
FD578632       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD580234       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EW717045       <-- ..................................................  Raphanus sativus var. oleiformis
FD561381       <-- ..................................................  Raphanus sativus var. oleiformis
FD972357       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV537834       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD964888       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EX903787       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD564194       <-- ..................................................  Raphanus sativus var. oleiformis
FD573758       --> TTCTGGAGTT-C-GTGGACTCACTGCAAGGGATAGCTCGCCAGCATAGTA  Raphanus sativus cv Early Scarlet Globe
FD565560       --> TTCTGGAGTT-C-GTGGACTCACTGCAAGGGATAGCTCGCCAGCATAGTA  Raphanus sativus var. oleiformis
FD538860       --> TTCTGGAGTTTC-GTGGATTCACTGCAAGGGATAGCTTGCCAGCATAGTA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV573474       --> TTCTGGAGTT-C-GTGGACTCACTGCAAGGGATAGCTCGCCAGCATAGTA  Raphanus raphanistrum subsp. landra
FD547965       --> TTCTGGAGTT-CCGTGGACTCACTGCAAGGGATAGCTCGCCAGCATAGTA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD975845       --> TTTTGGAGTT-CCGTGGACTCACTGCAAGGGATAGCTCGCCAGCATAGTA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY942015       --> TTCTGGAGTT-C-GTGGACTCACTGCAAGGGATAGCTCGCCAGCATAGCA  Raphanus sativus cv Rat-Tail Radish #3870
FD546082       --> TTCTGGAGTT-CCGTGGACTCACTGCAAGGGATAGCTCGCCAGCATAATA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD567737       --> TTCTGGAGTT-C-GTGGACTCACTGCAAGGGATAGCTCGCCAGCATAGTA  Raphanus sativus var. oleiformis
FD967248       --> TTCTGGAGTTTC-GTGGATTCACTGCAAGGGATAGCTTGCCAGCATAGTA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX753470       --> TTCTGGAGTTTC-GTGGATTCACTGCAAGGGATAGCTTGCCAGCATAGTA  Raphanus raphanistrum subsp. maritimus
FD531681       --> TTCTGGAGTTTC-GTGGATTCACTGCAAGGGATAGCTTGCCTGCATAGTA  Raphanus raphanistrum subsp. maritimus
EW737001       --> TTCTGGAGTT-C-GTGGACTCACTGCAAGGGATAGCTCGCCAGCATAGTA  Raphanus sativus cv Rat-Tail Radish #3870
FD968086       --> TTCTGGAGTTTC-GTGGATTCACTGCAAGGGATAGCTTGCCAGCATAGTA  Raphanus raphanistrum subsp. raphanistrum (MS)
EW720644       --> TTCTGGAGTT-C-GTGGACTCACTGCAAGGGATAGCTCGCCAGCATAGTA  Raphanus sativus var. oleiformis
EX759525       --> TTCTGGAGTTTC-GTGGATTCACTGCAAGGGATAGCTTGCCAGCATAGTA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD545941       --> TTCTGGAGTT-CCGTGGACTCACTGCAAGGGATAGCTCGCCAGCATAGTA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD968262       --> TTCTGGAGTTTC-GTGGATTCACTGCAAGGGATAGCTTGCCAGCATAGTA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX907789       --> TTCTGGAGTT-C-GTGGACTCACTGCAAGGGATAGCTCGCCAGCATAGTA  Raphanus sativus cv Rat-Tail Radish #3870
FD567862       --> TTCTGGAGTT-C-GTGGACTCACTGCAAGGGATAGCTCGCCAGCATAGTA  Raphanus sativus var. oleiformis
EW736633       --> TTCTGGAGTT-C-GTGGACTCACTGCAAGGGATAGCTCGCCAGCATAGTA  Raphanus sativus cv Rat-Tail Radish #3870

               351    -    401
UN21928        --> ATACCACATTTACCCCTGTCTTTACGATAACCACGTTCCATCCGTATGTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD550092       <-- ATACCACATTTACCCCTGTCTTTACGATAACCACGTTCCATCCGTATGTA
EW732524       <-- ATACCACATTTACCCCTGTCTTTACGATAACCACGTTCCATCCGTATGTA
EW732228       <-- ATACCACATTTACCCCTGTCTTTACGATAACCACGTTCCATCCGTATGTA
EY947116       <-- ATACCACATTTACCC-TGTCTTTACGATAACCACGTTCCATCCGTATGTA
FY429475       <-- ..................................................
FD549930       <-- ..................................................
FD564358       <-- ..................................................
FD956613       <-- ..................................................
EY945810       <-- ..................................................
FD552138       <-- ..................................................
FD556500       <-- ..................................................
FD979872       <-- ..................................................
FD561699       <-- ..................................................
FD578632       <-- ..................................................
FD580234       <-- ..................................................
EW717045       <-- ..................................................
FD561381       <-- ..................................................
FD972357       <-- ..................................................
EV537834       <-- ..................................................
FD964888       <-- ..................................................
EX903787       <-- ..................................................
FD564194       <-- ..................................................
FD573758       --> ATACCACATTTACCCCTGTCTTTACGATAACCACGTTCCATCCGTATGTA
FD565560       --> ATAACACATTTACCCCTGTCTTTACGATAACCACGTTCCATCCGTATGTA
FD538860       --> ATACCACATTTACCCCTGTCTTTACGATAACCACGTTCCATCCGTATGTA
EV573474       --> ATACCACATTTACCCCTGTCTTTACAATAACCACGTTCCATCCGTATGTA
FD547965       --> ATACCACATTTACCCCTGTCTTTACGATAACCACGTTCCATCCGTATGTA
FD975845       --> ATACCACATTTACCCCTGTCTTTACGATAACCACGTTCCATCCGTATGTA
EY942015       --> ATACCACATTTACCCCTCTCTTTACGATAACCACGTTCCATCCGTATGTA
FD546082       --> ATACCACATTTACCCCTGTCTTTACGATAACCACGTTCCATCCGTATGTA
FD567737       --> ATACCACATTTACCCCTGTCTTTACGATAACCACGTTCCATCCGTATGTA
FD967248       --> ATACCACATTTACCCCTGTCTTTACGATAACCACGTTCCATCCGTATGTA
EX753470       --> ATACCACATTTACCCCTGTCTTTACGATAACCACGTTCCATCCGTATGTA
FD531681       --> ATACCACATTTACCCCTGTCTTTACGATAACCACGTTCCATCCGTATGTA
EW737001       --> ATACCACATTTACCCCTGTCTTTACGATAACCACGTTCCATCCGTATGTA
FD968086       --> ATACCACATTTACCCCTGTCTTTACGATAACCACGTTCCATCCGTATGTA
EW720644       --> ATACCACATTTACCCCTGTCTTTACGATAACCACGTTCCATCCGTATGTA
EX759525       --> ATACCACATTTACCCCTGTCTTTACGATAACCACGTTCCATCCGTATGTA
FD545941       --> ATACCACATTTACCCCTGTCTTTACGATAACCACGTTCCATCCGTATGTA
FD968262       --> ATACCACATTTACCCCTGTCTTTACGATAACCACGTTCCATCCGTATGTA
EX907789       --> ATACCACATTTACCCCTGTCTTTAAGATAACCACGTTCCATCCGTATGTA
FD567862       --> ATACCACATTTACCCCTGTCTTTACGATAACCACGTTCCATCCGTATGTA
EW736633       --> ATACCACATTTACCCCTGTCTTTACGATAACCACGTTCCATCCGTATGTA

               401    -    451
UN21928        --> GCCTTCTTCACCCCAACCAGTTCCCCATGTATTCTTCACGATCCAGTACT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD550092       <-- GCCTTCTTCACCCCAACCAGTTCCCCATGTATTCTTCACGATCCAGTACT
EW732524       <-- GCCTTCTTCACCCCAACCAGTTCCCCATGTATTCTTCACGATCCAGTACT
EW732228       <-- GCCTTCTTCACCCCAACCAGTTCCCCATGTATTCTTCACGATCCAGTACT
EY947116       <-- GCTTTCTTCACCCCAACCAGTTCCCCATGTATTCTTCACGATCCAGTACT
FY429475       <-- ..................................................
FD549930       <-- ..................................................
FD564358       <-- ..................................................
FD956613       <-- ..................................................
EY945810       <-- ..................................................
FD552138       <-- ..................................................
FD556500       <-- ..................................................
FD979872       <-- ..................................................
FD561699       <-- ..................................................
FD578632       <-- ..................................................
FD580234       <-- ..................................................
EW717045       <-- ..................................................
FD561381       <-- ..................................................
FD972357       <-- ..................................................
EV537834       <-- ..................................................
FD964888       <-- ..................................................
EX903787       <-- ..................................................
FD564194       <-- ..................................................
FD573758       --> GCCTTCTTCACCCCAACCAGTTTCCCATG.....................
FD565560       --> GCCTTCTTCACCCCAACCAGTTCCCCATGTATTCTTCACGATCCAGTACT
FD538860       --> GCCTTCTTCACCCCA-CCAGTTCCCCATGTATTCTTCACGATCCAGTACT
EV573474       --> GCCTTCTTCACCCCAACCAGTTCCCCATGTATTCTTCACGATCCAGTACT
FD547965       --> GCCTTCTTCACCCCAACCAGTTCCCCATGTATTCTTCACGATCCAGTACT
FD975845       --> GCCTTCTTCACCCCAACCAGTTCCCCATGTATTCTTCACGATCCAGTACT
EY942015       --> GCCTTCTTCACCCCAACCAGTTCCCCATGTATTCTTCACGATCCAGTACT
FD546082       --> GCCTTCTTCACCCCAACCAGTTCCCCATGTATTCTTCACGATCCAGTACT
FD567737       --> GCCTTCTTCACCCCAACCAGTTCCCCATGTATTCTTCACGATCCAGTACT
FD967248       --> GCCTTCTTCACCCCAACCAGTTCCCCATGTATTCTTCACGATCCAGTACT
EX753470       --> GCCTTCTTCACCCCAACCAGTTCCCCATGTATTCTTCACGATCCAGTACT
FD531681       --> GCCTTCTTCACCCCAACCAGTTCCTCATGTATTCTTCACGATCCAGTACT
EW737001       --> GCCTTCTTCACCCCAACCAGTTCCCCATGTATTCTTCACGATCCAGTACT
FD968086       --> GCCTTCTTCACCCCAACCAGTTCCCCATGTATTCCTCACGATCCAGTACT
EW720644       --> GCCTTCTTCACCCCAACCAGTTCCCCATGTATTCTTCACGATCCAGTACT
EX759525       --> GCCTTCTTCACCCCAACCAGTTCCCCATGTATTCTTCACGATCCAGTACC
FD545941       --> GCCTTCTTCACCCCAACCAGTTCCCCATGTATTCTTCACGATCCAGTACT
FD968262       --> GACTTCTTCACCCCAACCAGTTTCCCATGTATTCTTCACGATCCAGTACT
EX907789       --> GCCTTCTTCACCCCAACCAGTTCCCCATGTATTCTTCACGATCCAGTACT
FD567862       --> GCCTTCTTCACCCCAACCAGTTCCCCATGTATTCTTCACGATCCAGTACT
EW736633       --> GCCTTCTTCACCCCAACCAGTTCCCCATGTATTCTTCACGATCCAGTACT

               451    -    501
UN21928        --> TTTGACCGTCTTCTTCTCCATATCCAACAACAGTCACAGCATGGTTGAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD550092       <-- TTTGACCGTCTTCTTCTCCATATCCAACAACAGTCACTGCATGGTTGAGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EW732524       <-- TTTGACCGTCTTCTTCTCCATATCCAACAACAGTCACAGCATGGTTGAGA  Raphanus sativus cv Rat-Tail Radish #3870
EW732228       <-- TTTGACCGTCTTCTTCTCCATATCCAACAACAGTCACAGCATGGTTGAGA  Raphanus sativus cv Rat-Tail Radish #3870
EY947116       <-- TTTGACCGTCTTCTTCTCCATATCCAACAACAGTCACAGCATGGTTGAGA  Raphanus sativus cv Rat-Tail Radish #3870
FY429475       <-- ................TCCATATCCAACAACAGTCACTGCATGGTTGAGA  Raphanus sativus cv GSK3-1
FD549930       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD564358       <-- ..................................................  Raphanus sativus var. oleiformis
FD956613       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY945810       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD552138       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD556500       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD979872       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD561699       <-- ..................................................  Raphanus sativus var. oleiformis
FD578632       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD580234       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EW717045       <-- ..................................................  Raphanus sativus var. oleiformis
FD561381       <-- ..................................................  Raphanus sativus var. oleiformis
FD972357       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV537834       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD964888       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EX903787       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD564194       <-- ..................................................  Raphanus sativus var. oleiformis
FD573758       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD565560       --> TTTGACCGTCTTCTTCTCCATATCCAACAACAGTCACAGCATGGTTGAAA  Raphanus sativus var. oleiformis
FD538860       --> TTCGACCGTCTTCTTCTCCATATCCAATAACAGTCACAGCATGGTTGAAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV573474       --> TTTGACCGTCTTCTTCTCCATATCCAACAACAGTCACAGCATGGTTGAAA  Raphanus raphanistrum subsp. landra
FD547965       --> TTTGACCGTCTTCTTCTCCATATCCAACAACAGTCACTGCATGGTTGAGA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD975845       --> TTTGACCGTCTTCTTCTCCATATCCAACAACAGTCACTGCATGGTTGAGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY942015       --> TTTGACCGTCTTCTTCTCCATATCCAACAACAGTCACTGCATGGTTGAGA  Raphanus sativus cv Rat-Tail Radish #3870
FD546082       --> TTTGACCGTCTTCTTCTCCATATCCAACAACAGTCACTGCATGGTTGAAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD567737       --> TTTGACCGTCTTCTTCTCCATATCCAACAACAGTCACAGCATGGTTGAAA  Raphanus sativus var. oleiformis
FD967248       --> TTTGACCGTCTTCTTCTCCATATCCAATAACAGTCCCAGCATGGTTGAAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX753470       --> TTTGACCGTCTTCTTCTCCATATCCAACAACAGTCACAGCATGGTTGAAA  Raphanus raphanistrum subsp. maritimus
FD531681       --> TTTGACCGTCTTCTTCTCCATATCCAACAACAGTCACAGCATGGTTGAAA  Raphanus raphanistrum subsp. maritimus
EW737001       --> TTTGACCGTCTTCTTCTCCATATCCAACAACAGTCACAGCATGGTTGAGA  Raphanus sativus cv Rat-Tail Radish #3870
FD968086       --> TTTGACCGTCTTCTTCTCCATATCCAATAACAGTCACAGCATGGTTGAGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EW720644       --> TTTGACCGTCTTCTTCTCCATATCCAACAACAGTCACAGCATGGTTGAGA  Raphanus sativus var. oleiformis
EX759525       --> TTTGACCGTCTTCTTCTCCATATCCAATAACAGTCACAGCATGGTTGAGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD545941       --> TTTGACCGTCTTCTTCTCCATATCCAACAACAGTCACTGCATGGTTGAAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD968262       --> TTTGACCGTCTTCTTCTCCATATCCAATAACAGTCACAGCATGGTTGAGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX907789       --> TTTGACCGTCTTCTTCTCCATATCCAACAACAGTCACAGCATGGTTGAGA  Raphanus sativus cv Rat-Tail Radish #3870
FD567862       --> TTTGACCGTCTTCTTCTCCATATCCAACAACAGTCACAGCATGGTTGAAA  Raphanus sativus var. oleiformis
EW736633       --> TTTGACCGTCTTCTTCTCCATATCCAACAACAGTCACAGCATGGTTGAGA  Raphanus sativus cv Rat-Tail Radish #3870

               501    -    551
UN21928        --> CTTGACCCACAGTAACCTGTGAAAATACCAGAAGAGTAGAACTGAAAGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD550092       <-- CTTGACCCACAGTAACCTGTGAAAATACCAGAAGAGTAGAACTGAAAGAT
EW732524       <-- CTTGACCCACAGTAACCTGTGAAAATACCAGAAGAGTAGAACTGAAAGAT
EW732228       <-- CTTGACCCACAGTAACCTGTGAAAATACCAGAAGAGTAGAACTGAAAGAT
EY947116       <-- CTTGACCCACAGTAACCTGTGAAAATACCAGAAGAGTAGAACTGAAAGAT
FY429475       <-- CTTGACCCACAGTAACCTGTGAAAATACCAGAAGAGTAGAACTGAAAGAT
FD549930       <-- ..................................................
FD564358       <-- ..................................................
FD956613       <-- ..................................................
EY945810       <-- ..................................................
FD552138       <-- ..................................................
FD556500       <-- ..................................................
FD979872       <-- ..................................................
FD561699       <-- ..................................................
FD578632       <-- ..................................................
FD580234       <-- ..................................................
EW717045       <-- ..................................................
FD561381       <-- ..................................................
FD972357       <-- ..................................................
EV537834       <-- ..................................................
FD964888       <-- ..................................................
EX903787       <-- ..................................................
FD564194       <-- ..................................................
FD573758       --> ..................................................
FD565560       --> CTTGACCCACAGTAACCTGTGAAAATACCAGAAGA...............
FD538860       --> CTTGACCCACAGTAACCTGTGAAAATACCAGAAGAGTAGAACTGAAAGAT
EV573474       --> CTTGACCCACAGTAACCTGTGAAAATACCAAAAAAGTAAAACTGAAAGAT
FD547965       --> CTTGACCCACAGTAACCTGTGAAAATGCCAGAAGAGTAGAACTGAAAGAT
FD975845       --> CTTGACCCACAGTAACCTGTGAAAATACCAGAAGAGTAGAACTGAAAGAT
EY942015       --> CTTGACCCACAGTAACCTGTGAAAATACCAGAAGAGTAGAACTGAAAGAT
FD546082       --> CTTGACCCACAGTAACCTGTGAAAATACCAGAA.................
FD567737       --> CTTGGCCCACAGTAACCTGTGAAAATACCAGAA.................
FD967248       --> CTTGACCCACAGTAACCTGTGAAAATACCAGAAGAGTAGAACTGAAAGAT
EX753470       --> CTTGACCCACAGTAACCTGTGAAAATACCAGAAGAGTAGAACTGAAAGAT
FD531681       --> CTTGACCCACAGTAACCTGTGAAAATACCAGAAGAGTAGAACTGAAAGAT
EW737001       --> CTTGACCCACAGTAACCTGTGAAAATACCAGAAGAGTAGAACTGAAAGAT
FD968086       --> CTTGACCCACAGTAACCTGTGAAAATACCAGAAGAGTAGAACTGAAAGAT
EW720644       --> CTTGACCCACAGTAACCTGTGAAAATACCAGAAGAGTAGAACTGAAAGAT
EX759525       --> CTTGACCCACAGTAACCTGTGAAAATACCAGAAGAGTAGAACTGAAAGAT
FD545941       --> CTTGACCCACAGTAACCTGTGAAAATACCAGAAGAGTAGAACTGAAAGAT
FD968262       --> CTTGACCCACAGTAACCTGTGAAAATACCAGAAGAGTAGAACTGAAAGAT
EX907789       --> CTTGACCCACAGTAACCTGTGAAAATACCAGAAGAGTAGAACTGAAAGAT
FD567862       --> CTTGACCCACAGTAACCTGTGAAAATACCAGAAGAGTAGAACTGAAAGAT
EW736633       --> CTTGACCCACAGTAACCTGTGAAAATACCAGAAGAGTAGAACTGAAAGAT

               551    -    601
UN21928        --> AAACCCATCAGCGTCGATTCCAACTGACACTGGTTGTTGAGCAGCAGCGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD550092       <-- AAACCCATCAGCGTCGACTCCAACTGACACTGGTTGTTGAGCAGCAGCGG  Raphanus raphanistrum subsp. raphanistrum (NY)
EW732524       <-- AAACCCGTCAGCGTCGATTCCAACTGACACCGGTTGCTGAGCAGCAGCGA  Raphanus sativus cv Rat-Tail Radish #3870
EW732228       <-- AAACCCGTCAGCGTCGATTCCAACTGACACCGGTTGCTGAGCAGCAGCGA  Raphanus sativus cv Rat-Tail Radish #3870
EY947116       <-- AAACCCGTCAGCGTCGATTCCAACTGACACTGGTTGCTGAGCAGCAGCGA  Raphanus sativus cv Rat-Tail Radish #3870
FY429475       <-- AAACCCATCAGCGTCGATTCCAACTGACACTGGTTGTTGAGCAGCAGCGA  Raphanus sativus cv GSK3-1
FD549930       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD564358       <-- ..................................................  Raphanus sativus var. oleiformis
FD956613       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY945810       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD552138       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD556500       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD979872       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD561699       <-- ..................................................  Raphanus sativus var. oleiformis
FD578632       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD580234       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EW717045       <-- ..................................................  Raphanus sativus var. oleiformis
FD561381       <-- ..................................................  Raphanus sativus var. oleiformis
FD972357       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV537834       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD964888       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EX903787       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD564194       <-- ..................................................  Raphanus sativus var. oleiformis
FD573758       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD565560       --> ..................................................  Raphanus sativus var. oleiformis
FD538860       --> AAACCCATCAGCGTCGATTCCAACTGACACTGGTTGTTGAGCAGTAGCGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV573474       --> AAAACCATCAGCGTCGATTCCAACTGACACTGGTTGTTGAGCAGCAGCGA  Raphanus raphanistrum subsp. landra
FD547965       --> AAACCCATCAGCGTCGATTCCAACTGACACTGGTTGTTGAGCAGCAGCGG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD975845       --> AAACCCATCAGCGTCGATTCCAACTGACACTGGTTGTTGAGCAGCAGCGG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY942015       --> AAACCCATCAGCGTCGATTCCAACTGACACTGGTTGTTGAGCAGCAGCGA  Raphanus sativus cv Rat-Tail Radish #3870
FD546082       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD567737       --> ..................................................  Raphanus sativus var. oleiformis
FD967248       --> AAACCCATCAGCGTCGATTCCAACTGACACTGGTTGTTGAGCAGTAGCGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX753470       --> AAACCCGTCAGCATCGATTCCAACTGACACTGGTTGTTGAGCAGCAGCGA  Raphanus raphanistrum subsp. maritimus
FD531681       --> AAACCCGTCAGCATCGATTCCAACTGACACTGGTTGTTGAGCAGCAGCGA  Raphanus raphanistrum subsp. maritimus
EW737001       --> AAACCCGTCAGCGTCGATTCCAACTGACACCGGTTGCTGAGCAGCAGCGA  Raphanus sativus cv Rat-Tail Radish #3870
FD968086       --> AAACCCATCAGCGTCGATTCCAACTGACACTGGTTGTTGAGCAGTAGCGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EW720644       --> AAACCCGTCAGCGTCGATTCCAACTGACACTGGTTGCTGAGCAGCAGCGA  Raphanus sativus var. oleiformis
EX759525       --> AAACCCATCAGCGTCGATTCCAACTGACACTGGTTGTTGAGCAGTAGCGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD545941       --> AAACCCATCAGCGTCGATTCCAACTGACACTGGTTGTTGAGCAGCAGCGG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD968262       --> AAACCCATCAGCGTCGATTCCAACTGACACTGGTTGTTGAGCAGTAGCGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX907789       --> AAACCCGTCAGCGTCGATTCCAACTGACACTGGTTGCTGAGCAGCAGCGA  Raphanus sativus cv Rat-Tail Radish #3870
FD567862       --> AAACCCGTCAGCGTCGATTCCAACTGACACTGGTTGCTGAGCAGCAGCGA  Raphanus sativus var. oleiformis
EW736633       --> AAACCCGTCAGCGTCGATTCCAACTGACACCGGTTGCTGAGCAGCAGCGA  Raphanus sativus cv Rat-Tail Radish #3870

               601    -    651
UN21928        --> CTTGTAGGCTCTCCTCATTCGGTGCTACCTTTTGGTATCCTGTAATT-GT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD550092       <-- CTTGTAGGCTTTCCTCATTCGGTGCTACCTTTTGGTATCCTGTAACT-GT  Raphanus raphanistrum subsp. raphanistrum (NY)
EW732524       <-- CTTCTAGGCTCGCCTCATTCGGTGCTACCTTTTGGTATCCTGTAATT-GT  Raphanus sativus cv Rat-Tail Radish #3870
EW732228       <-- CTTCTAGGCTCGCCTCATTCGGTGCTACCTTTTGGTATCCTGTAATT-GT  Raphanus sativus cv Rat-Tail Radish #3870
EY947116       <-- CTTCTAGGCTCGCCTCATTCGGTGCTACCTTTTGGTATCCTGTAATT-GT  Raphanus sativus cv Rat-Tail Radish #3870
FY429475       <-- CTTGTAGGCTCTCCTCGTTCGGTGCTACCTTTTGGTATCCTGTAATT-GT  Raphanus sativus cv GSK3-1
FD549930       <-- ......tagctTCCTCATTCG-TGCTAC-TTTT-GTATCCTGTAATT-GT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD564358       <-- ..................................GTATC-TGTAAT--GT  Raphanus sativus var. oleiformis
FD956613       <-- ..................................GTATCCTGTAATT-GT  Raphanus sativus cv Rat-Tail Radish #3870
EY945810       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD552138       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD556500       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD979872       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD561699       <-- ..................................................  Raphanus sativus var. oleiformis
FD578632       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD580234       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EW717045       <-- ..................................................  Raphanus sativus var. oleiformis
FD561381       <-- ..................................................  Raphanus sativus var. oleiformis
FD972357       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV537834       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD964888       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EX903787       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD564194       <-- ..................................................  Raphanus sativus var. oleiformis
FD573758       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD565560       --> ..................................................  Raphanus sativus var. oleiformis
FD538860       --> CTTGTAAGCTCTCCTCGTTCGGTGCTACCTTTTGGTATCATGTAATT-GT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV573474       --> CTTGTAAGCTCTCCTCGTTCGGTGCTACCTTTTGGTATCCTGTAATT-GT  Raphanus raphanistrum subsp. landra
FD547965       --> CTTGTAGGCTTTCCTCATTCGGTGCTACCTTTTGGTATCCTGTAATT-GT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD975845       --> CTTGTAGGCTTTCCTCATTCGGTGCTACCTTTTGGTATCCTGTAATT-GT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY942015       --> CTTGTAGGCTCTCCTCGTTCGGTGCTACCTTTTGGTATCCTGTAATT-GT  Raphanus sativus cv Rat-Tail Radish #3870
FD546082       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD567737       --> ..................................................  Raphanus sativus var. oleiformis
FD967248       --> CTTGTAAGCTCTCCTCGTTCGGTGCTACCTTTTGGTATCCTGTAATT-GT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX753470       --> CTTCTAGGCTCGCCTCATTCGGTGCTACCTTTTGGTATCCTGTAATT-GT  Raphanus raphanistrum subsp. maritimus
FD531681       --> CTTCTAGGCTCGCCTCATTCGGTGCTACCTTTTGGTATCCTGTAATT-GT  Raphanus raphanistrum subsp. maritimus
EW737001       --> CTTCTAGGCTCGCCTCATTCGGTGCTACCTTTTGGTATCCTGTAATT-GT  Raphanus sativus cv Rat-Tail Radish #3870
FD968086       --> CTTGTAAGCTCTCCTCGTTCGGTGCTACCTTTTGGTATCCTGTAATT-GT  Raphanus raphanistrum subsp. raphanistrum (MS)
EW720644       --> CTTCTAGGCTCACCTCATTCGGTGCTACCTTTTGGTATCCTGTAATT-GT  Raphanus sativus var. oleiformis
EX759525       --> CTTGTAAGCTCTCCTCGTTCGGTGCTACCTTTTGGTATCCTGTAATT-GT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD545941       --> CTTGTAGGCTTTCCTCATTCGGTGCTACCTTTTGGTATCCTGTAATT-GT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD968262       --> CTTGTAAGCTCTCCTCGTTCGGTGCTACCTTTTGGTATCCTGTAATT-GT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX907789       --> CTTCTAGGCTCGCCTCATTCGGTGCTACCTTTTGGTATCCTGTAATT-GT  Raphanus sativus cv Rat-Tail Radish #3870
FD567862       --> CTTCTAGGCTCGCCTCATTCGGTGCTACCTTTTGGTATCCTGTAATT-GT  Raphanus sativus var. oleiformis
EW736633       --> CTTCTAGGCTCGCCTCATTCGGTGCTACCTTTTGGTATCCTGTAATTTGT  Raphanus sativus cv Rat-Tail Radish #3870

               651    -    701
UN21928        --> AACGATCTTATTTTTGGATTTTTCTTGGTCGCAGCCGGTACCATCTGTGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD550092       <-- AACGATCTTATTTTTGGATTTTTCTTGGTTGCAGCCGGTACCATCTGTGG  Raphanus raphanistrum subsp. raphanistrum (NY)
EW732524       <-- AACGATCTTATTTTTGGATTTTTCTTGGTCGCAGCCGGTACCATCTGTGG  Raphanus sativus cv Rat-Tail Radish #3870
EW732228       <-- AACGATCTTATTTTTGGATTTTTCTTGGTCGCAGCCGGTACCATCTGTGG  Raphanus sativus cv Rat-Tail Radish #3870
EY947116       <-- AACGATCTTATTTTTGGATTTTTCTTGGTCGCAGCCGGTACCATCTGTGG  Raphanus sativus cv Rat-Tail Radish #3870
FY429475       <-- AACGATCTTATTTTTGGATTTTTCTTGGTCGCAGCCGGTACCATCTGTGG  Raphanus sativus cv GSK3-1
FD549930       <-- AACGATCTTATTTTTGGATTTT-CTTGGT-GCAGCCGGTACCATCTGTGG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD564358       <-- AACGATCT-ATTTT-GGATTTT-C-TGGTCGCAGCCGGTACCATCTGTGG  Raphanus sativus var. oleiformis
FD956613       <-- AACGATCTTATTTT-GGATTTTTCTTGGTCGCAGCCGGTACCATCTGTGG  Raphanus sativus cv Rat-Tail Radish #3870
EY945810       <-- ..........TTTTTGGATTTT-CTTGGTCGCAGCCGGTACCATCTGTGG  Raphanus sativus cv Rat-Tail Radish #3870
FD552138       <-- ..........TTTTTGGATTTT-CTTGGT-GCAGCCGGTACCATCTGTGG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD556500       <-- ..........TTTTTGGATTTTTCTTGGTCGCAGCCCGTACCATCTGTGG  Raphanus raphanistrum subsp. landra
FD979872       <-- ..........TTTTTGGATTTT-CTTGGT-GCAGCCGGTACCATCTGTGG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD561699       <-- ..................aTTTTCTTGGTTGCAGCCGGTACCATCTGTGG  Raphanus sativus var. oleiformis
FD578632       <-- ..................aTTTTCT-GGTCGCAGCCGGTACCATCTGTGG  Raphanus sativus cv Rat-Tail Radish #3870
FD580234       <-- ...................TTTTCTTGGTCGCAGCCGGTACCATCTGTGG  Raphanus sativus cv Rat-Tail Radish #3870
EW717045       <-- .......................CTTGGTCGCAGCCGGTACCATCTGTGG  Raphanus sativus var. oleiformis
FD561381       <-- ..............................GCAGC-GGTACCATCTGTGG  Raphanus sativus var. oleiformis
FD972357       <-- ...........................................TCTGTGG  Raphanus raphanistrum subsp. raphanistrum (MS)
EV537834       <-- ............................................CTGTGG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD964888       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EX903787       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD564194       <-- ..................................................  Raphanus sativus var. oleiformis
FD573758       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD565560       --> ..................................................  Raphanus sativus var. oleiformis
FD538860       --> AACGATCTTATTTTTGGATTTTTCTTGGTCGCACCCGGTACCATCTGTGG  Raphanus raphanistrum subsp. raphanistrum (MS)
EV573474       --> AACGATCTTATTTTTGGATTTTTCTTGGTCGCAGCCGGTACCATCTGTGG  Raphanus raphanistrum subsp. landra
FD547965       --> AACGATCTTATTTTTGGATTTTTCTTGGTTGCAGCCGGTACCATCTGTGG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD975845       --> AACGATCTTATTTTTGGATTTTTCTTGGTTGCAGCCGGTACCATCTGTGG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY942015       --> AACGATCTTATTTTTGGATTTTTCTTGGTCGCAGCCGGTACCATCTGTGG  Raphanus sativus cv Rat-Tail Radish #3870
FD546082       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD567737       --> ..................................................  Raphanus sativus var. oleiformis
FD967248       --> AACGATCTTATTTTTGGATTTTTCTTGGTCGCACCCGGTACCATCTGTGG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX753470       --> AACGATCTTATTTTTGGATTTTTCTTGGTAGCAGCCGGTACCATCTGTGG  Raphanus raphanistrum subsp. maritimus
FD531681       --> AACGATCTTATTTTTGGATTTTTCTTGGTCGCAGCCGGTACCATCTGTGG  Raphanus raphanistrum subsp. maritimus
EW737001       --> AACGATCTTATTTTTGGATTTTTCTTGGTCGCAGCCGGTACCATCTGTGG  Raphanus sativus cv Rat-Tail Radish #3870
FD968086       --> AACGATCTTATTTTTGGATTTTTCTTGGTCGCACCCGGTACCATCTGTGG  Raphanus raphanistrum subsp. raphanistrum (MS)
EW720644       --> AACGATCTTATTTTTGGATTTTTCTTGGTCGCAGCCGGTACCATCTGTGG  Raphanus sativus var. oleiformis
EX759525       --> AACGATCTTATTTTTGGATTTTTCTTGGTCGCACCCGGTACCATCTGTGG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD545941       --> AACGATCTTATTTTTGGATTTTTCTTGGTTGCAGCCGGTACCATCTGTGG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD968262       --> AACGATCTTATTTTTGGATTTTTCTTGGTCGCACCCGGTACCATCTGTGG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX907789       --> AACGATCTTATTTTTGGATTTTTCTTGGTCGCAGCCGGTACCATCTGTGG  Raphanus sativus cv Rat-Tail Radish #3870
FD567862       --> AACGATCTTATTTTTGGATTTTTCTTGGTCGCAGCCGGTACCATCTGTGG  Raphanus sativus var. oleiformis
EW736633       --> AACGATCTTATTTTTGGATTTTTCTTGGTCGCAGCCGGTACCATCTGTGG  Raphanus sativus cv Rat-Tail Radish #3870

               701    -    751
UN21928        --> CTGTGTATGGGTAGTCGTCCAAGGCGACGAGTCCACCATTAGCTATGAGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD550092       <-- CTGTGTATGGGTAGTCGTCCAAGGCGACGAGTCCACCATTAGC-ATAAGG  Raphanus raphanistrum subsp. raphanistrum (NY)
EW732524       <-- CTGTGTATGGGTAGTCGTCCAAGGCGACGAGTCCACCATTAGCTATGAGG  Raphanus sativus cv Rat-Tail Radish #3870
EW732228       <-- CTGTGTATGGGTAGTCGTCCAAGGCGACGAGTCCACCATTAGCTATGAGG  Raphanus sativus cv Rat-Tail Radish #3870
EY947116       <-- CTGTGTATGGGTAGTCGTCCAAGGCGACGAGTCCACCATTAGCTATGAGG  Raphanus sativus cv Rat-Tail Radish #3870
FY429475       <-- CTGTGTATGGGTAGTCGTCCAAGGCGACGAGTCCACCATTAGCTATAAGG  Raphanus sativus cv GSK3-1
FD549930       <-- CTGTGTATGGGTAGTCGTCCAAGGCGACGAGTCCACCATTAGCTATAAGG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD564358       <-- CTGTGTATGGGTAGTCGTCCAAGGCGACGAGTCCACCATTAGCTATGAGG  Raphanus sativus var. oleiformis
FD956613       <-- CTGTGTATGGGTAGTCGTCCAAGGCGACGAGTCCACCATTAGCTATGAGG  Raphanus sativus cv Rat-Tail Radish #3870
EY945810       <-- CTGTGTATGGGTAGTCGTCCAAGGCGACGAGTCCACCATTAGCTATAAGG  Raphanus sativus cv Rat-Tail Radish #3870
FD552138       <-- CTGTGTATGGGTAGTCGTCCAAGGCGACGAGTCCACCATTAGCTATAAGG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD556500       <-- CTGTGTATGGGTAGTCGTCCAAGGCGACGAGTCCACCATTAGCTATGAGG  Raphanus raphanistrum subsp. landra
FD979872       <-- CTGTGTATGGGTAGTCGTCCAAGGCGACGAGTCCACCATTAGCTATAAGG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD561699       <-- CTGTGTATGGGTAGTCGTCCAAGGCGACGAGTCCACCATTAGCTATAAGG  Raphanus sativus var. oleiformis
FD578632       <-- CTGTGTATGGGTAGTCGTCCAAGGCGACGAGTCCACCATTAGCTATAAGG  Raphanus sativus cv Rat-Tail Radish #3870
FD580234       <-- C-GTGTATGGGTAGTCGTCCAAGGCGACGAGTCCACCATTGGCTATAAGG  Raphanus sativus cv Rat-Tail Radish #3870
EW717045       <-- CTGTGTATGGGTAGTCGTCCAAGGCGACGAGTCCACCATTAGCTATGAGG  Raphanus sativus var. oleiformis
FD561381       <-- CTGTGTATGGGTAGTCGTCCAAGGCGACGAGTCCACCATTAGCTATGAGG  Raphanus sativus var. oleiformis
FD972357       <-- CTGTGTATGGGTAGTCGTCCAAGGCGACAAGTCCACCATTAGCTATGAGG  Raphanus raphanistrum subsp. raphanistrum (MS)
EV537834       <-- CTGTGTATGGATAGTCGTCCAAGGCGACGAGTCCACCATTAGCTATGAGG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD964888       <-- ...............................TCCAC-ATTAGCTATGAGG  Raphanus raphanistrum subsp. maritimus
EX903787       <-- ...............................................AGG  Raphanus sativus cv Rat-Tail Radish #3870
FD564194       <-- ..................................................  Raphanus sativus var. oleiformis
FD573758       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD565560       --> ..................................................  Raphanus sativus var. oleiformis
FD538860       --> CTGTGTATGGGTAGTCGTCCAAGGCGACAAGTCCACCATTAGCTATGAGG  Raphanus raphanistrum subsp. raphanistrum (MS)
EV573474       --> CTGTGTACGGGTAGTCGTCCAAG...........................  Raphanus raphanistrum subsp. landra
FD547965       --> CTGTGTATGGGTAGTCGTCCAAGGCGACGAGTCCACCATTAGCTATAAGG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD975845       --> CTGTGTATGGGTAGTCGTCCAAGGCGACGAGTCCACCATTAGCTATAAGG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY942015       --> CTGTGTATGGGTAGTCGTCCAAGGCGACGAGTCCACCATTAGCTATAAGG  Raphanus sativus cv Rat-Tail Radish #3870
FD546082       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD567737       --> ..................................................  Raphanus sativus var. oleiformis
FD967248       --> CTGTGTATGGGTAGTCGTCCAAGGCGACAAGTCCACCATTAGCTATGAGG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX753470       --> CTGTGTATGGGTAGTCGTCCAAGGCGACAAGTCCACCATTAGCTATGAGG  Raphanus raphanistrum subsp. maritimus
FD531681       --> CTGTGTATGGGTAGTCGTCCAAGGCGACAAGTCCACCATTAGCTATGAGG  Raphanus raphanistrum subsp. maritimus
EW737001       --> CTGTGTATGGGTAGTCGTCCAAGGCGACGAGTCCACCATTAGCTATGAGG  Raphanus sativus cv Rat-Tail Radish #3870
FD968086       --> CTGTGTATGGGTAGTCGTCCAAGGCGACAAGTCCACCATTAGCTATGAGG  Raphanus raphanistrum subsp. raphanistrum (MS)
EW720644       --> CTGTGTATGGGTAGTCGTCCAAGGCGACGAGTCCACCATTAGCTATGAGG  Raphanus sativus var. oleiformis
EX759525       --> CTGTGTATGGGTAGTCGTCCAAGGCGACAAGTCCACCACTAGCTATGAGG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD545941       --> CTGTGTATGGGTAGTCGTCCAAGGCGACGAGTCCACCATTAGCTATAAGG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD968262       --> CTGTGTATGGGTAGTCGTCCAAGGCGACAAGTCCACCATTAGCTATGAGG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX907789       --> CTGTGTATGGGTAGTCGTCCAAGGCGACGAGTCCACCATTAGCTATGAGG  Raphanus sativus cv Rat-Tail Radish #3870
FD567862       --> CTGTGTATGGGTAGTCGTCCA.............................  Raphanus sativus var. oleiformis
EW736633       --> CTGTGTATGGGTAGTCGTCCAAGGCGACGAGTCCACCATTAGCTATGAGG  Raphanus sativus cv Rat-Tail Radish #3870

               751    -    801
UN21928        --> TATTCATAGGCTGTTTCCATTAATCCACCGCTACACCC-TTTGTTGTAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD550092       <-- TATTCATAGGCTGTTTCCATTAATCCACCGCTACACCC-TTTGTTGTAAC
EW732524       <-- TATTCATAGGCTGTTTCCATTAATCCACCACTACACCC-TTTGTTGTAAC
EW732228       <-- TATTCATAGGCTGTTTCCATTAATCCACCACTACACCC-TTTGTTGTAAC
EY947116       <-- TATTCATAGGCTGTTTCCATTAATCCACCACTACACCC-TTTGTTGTAAC
FY429475       <-- TATTCATAGGCTGTTTCCATTAATCCACCGCTGCATCC-TTTGTTGTAAC
FD549930       <-- TATTCATAGGCTGTTTCCATTAATCCACCGCTACACCCCTTTGTTGTAAC
FD564358       <-- TATTCATAGGCTGTTTCCATTAATCCACCACTACACCC-TTTGTTGTAAC
FD956613       <-- TATTCATAGGCTGTTTCCATTAATCCACCACTACACCC-TTTGTTGTAAC
EY945810       <-- TATTCATAGGCTGTTTCCATTAATCCACCGCTGCA-TC-TTTGTTGTAAC
FD552138       <-- TATTCATAGGCTGTTTCCATTAATCCACCGCTACACCC-TTTGTTGTAAC
FD556500       <-- TATTCATAGGCTGTTTCCATTAATCCACCGCTACACCC-TTTGTTGTAAC
FD979872       <-- TATTCATAGGCTGTTTCCATTAATCCACCGCTACACC--TTTGTTGTAAC
FD561699       <-- TATTCATAGGCTGTTTCCATTAATCCACCGCTACACCC-TTTGTTGTAAC
FD578632       <-- TATTCATAGGCTGTTTCCATTAATCCACCGCTGCATCC-TTTGTTGTAAC
FD580234       <-- TATTCATAGGCTGTTTCCATTAATCCACCGCTGCATCC-TTTGTTGTAAC
EW717045       <-- TATTCATAGGCTGTTTCCACTAATCCACCACTACACCC-TTTGTTGTAAC
FD561381       <-- TATTCATAGGCTGTTTCCATTAATCCACCACTACACCC-TTTGTTGTAAC
FD972357       <-- TATTCATAAGCTGTTTCCATTAATCCACCACTACACCC-TTTGTTGTAAC
EV537834       <-- TATTCATAGGCTGTTTCCATTAATCCACCGCTACATCC-TTTGTTGTAAC
FD964888       <-- TATTCATAGGCTGTTTCCATTAA-CCACCGATACACC--TTTGTTGTAAC
EX903787       <-- TATTCATAGGCTGTTTCCATTAATCCACCACTACACCC-TTTGTTGTAAC
FD564194       <-- ..................................................
FD573758       --> ..................................................
FD565560       --> ..................................................
FD538860       --> TATTCATAAGCTGTTTCCATTAATCCACCACTACACCC-TTTGTTGTAAC
EV573474       --> ..................................................
FD547965       --> TATTCATAGGCTGTTTCCATTAATCCACCGCTACACCC-TTTGTTGTAAC
FD975845       --> TATTCATAGGCTGTTTCCATTAATCCACCGCTACACCC-TTTGTTGTAAC
EY942015       --> TATTCATAGGCTGTTTCCATTAATCCACCGCTGCATCC-TTTGTTGTAAC
FD546082       --> ..................................................
FD567737       --> ..................................................
FD967248       --> TATTCATAAGCTGTTTCCATTAATCCACCACTACACCC-TTTGTTGTAAC
EX753470       --> TATTCATAGGCTGTTTCCATTAATCCACCGCTACACCC-TTTGTTGTAAC
FD531681       --> TATTCATAGGCTGTTCCCATTAATCCACCGCTACACCC-TTTGTTGTAAC
EW737001       --> TATTCATAGGCTGTTTCCATTAATCCACCACTACACCC-TTTGTTGTAAC
FD968086       --> TATTCATAAGCTGTTTCCATTAATCCACCac...................
EW720644       --> TATTCATAGGCTGTTTCCACTAATCCACCACTACACCC-TTTGTTGTAAC
EX759525       --> TATTCATAAGCTGTTTCCATTAATCCACCACTACACCC-TTTGTTGTAAC
FD545941       --> TATTCATAGGCTGTTTCCATTAATCCACCGCTACACCC-TTTGTTGTAAC
FD968262       --> TATTCATAAGCTGTTTCCATTAATCCACCACTACACCC-TTTGTTGTAAC
EX907789       --> TATTCATAGGCTGTTTCCATTAATCCACCACTACACCC-TTTGTTGTAAC
FD567862       --> ..................................................
EW736633       --> TATTCATAGGCTGTTTCCATTAATCCACCACTACACCCCTTTGTTGTAAC

               801    -    851
UN21928        --> TGCCGGTATCACAATCTATGAGTTGTTGTTCTGAGAGAGTTACTAAATTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD550092       <-- TGCCGGTc..........................................
EW732524       <-- TGCCGGTATCACAATCTATGAGTTGTTGTTCTGAGAGAGTTACTAAATTC
EW732228       <-- TGCCGGTATCACAATCTATGAGTTGTTGTTCTGAGAGAGTTACTAAATTC
EY947116       <-- TGCCGGTATCACAATCTATGAGTTGTTGTTCTGAGAGAGTTACTAAATTC
FY429475       <-- TGCCGGTATCACAATCTATGAGTTGTTGTTCTGAGAGAGTTACTAAATTC
FD549930       <-- TGCCGGTATCACAATCTATGAGTTGTTGTTCTGAGAGAGTTACTAAATTC
FD564358       <-- TGCCGGTATCACAATCTATGAGTTGTTGTTCTGAGAGAGTTACTAAATTC
FD956613       <-- TGCCGGTATCACAATCTATGAGTTGTTGTTCTGAGAGAGTTACTAAATTC
EY945810       <-- TGCCGGTATCACAATCTATGAGTTGTTGTTCTGAGAGAGTTACTAAATTC
FD552138       <-- TGCCGGTATCACAATCTATGAGTTGTTGTTCTGAGAGAGTTACTAAATTC
FD556500       <-- TGCCGGTATCACAATCTATGAGTTGTTGTTCTGAGAGAGTTACTAAATTC
FD979872       <-- TGCCGGTATCACAATCTATGAGTTGTTGTTCTGATAGAGTTACTAAATTC
FD561699       <-- TGCCGGTATCACAATCTATGAGTTGTTGTTCTGAGAGAGTTACTAAATTC
FD578632       <-- TGCCGGTATCACAATCTATGAGTTGTTGTTCTGAGAGAGTTACTAAATTC
FD580234       <-- TGCCGGTATCACAATCTATGAGTTGTTGTTCTGAGAGAGTTACTAAATTC
EW717045       <-- TGCCGGTATCACAATCTATGAGTTGTTGTTCTGAGAGAGTTACTAAATTC
FD561381       <-- TGCCGGTATCACAATCTATGAGTTGTTGTTCTGAGAGAGTTACTAAATTC
FD972357       <-- TGCCGGTATCACAATCTATGAGTTGTTGTTCTGAGAGAGTTACTAAATTC
EV537834       <-- TGCCGGTATCACAATCTATGAGTTGTTGTTCTGAGAGAGTTACTAAATTC
FD964888       <-- TGCCGGTATCACAATCTATGAGTTGTTGTTCTGAGAGAGTTA-TAAATTC
EX903787       <-- TGCCGGTATCACAATCTATGAGTTGTTGTTCTGAGAGAGTTACTAAATTC
FD564194       <-- ..........................TGTTCTGAGAGGGTTACTAAATTC
FD573758       --> ..................................................
FD565560       --> ..................................................
FD538860       --> TGCCGGTATCACAATCTATGA.............................
EV573474       --> ..................................................
FD547965       --> TGCCGGTATCACAATCTATGAGTTGTTGTTCTGAGAGAGTTACTAAATTC
FD975845       --> TGCCGGTATCACAATCTATGAGTTGTTGTTCTGATAGAGTTACTAAATTC
EY942015       --> TGCCGGTATCACAATCTATGAGTTGTTGTTCTGAGAGAGTTA........
FD546082       --> ..................................................
FD567737       --> ..................................................
FD967248       --> TGCCGGTATCACAATCTATGAGTTGTTGTTCTGAGAGAGTTACTAAATTC
EX753470       --> TGCCGGTATCACAGTCTATGAGTTGTTGTTCTGAGAGAGTTACTAAATTC
FD531681       --> TGCCGGTATCACAGTCTATGAGTTGTTGTTCTGAGAGAGTTACTAAATTC
EW737001       --> TGCCGGTATCACAATCTATGAGTTGTTGTTCTGAGAGAGTTACTAAATTC
FD968086       --> ..................................................
EW720644       --> TGCCGGTATCACAATCTATGAGTTGTTGTTCTGAGAGAGTTACTAAATTC
EX759525       --> TGCCGGTATCACAATCTATGAGTTGTTGTTCTGAGAGAGTTACTAAATTC
FD545941       --> TGCCGGTATCACAATCTATGAGTTGTTGTTCTGAGAGAGTTACTAAATTC
FD968262       --> TGCCGGTATCACAATCTATGAGTTGTTGTTCTGAGAGAGTTACTAAATTC
EX907789       --> TGCCGGTATCACAATCTATGAGTTGTTGTTCTGAGAGAGTTACTAAATTC
FD567862       --> ..................................................
EW736633       --> TGCCGGTATCACAATCTATGAGTTGTTGTTCTGAGAGAGTTACTAAATTC

               851    -    901
UN21928        --> CCTGTGTTTATCTTGTTGATTCCTTCAATAGCTGAAACTGTGGCGAAAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD550092       <-- ..................................................
EW732524       <-- CCTGTGTTTATCTTATTGATTCCTTCAATAGCTGAAACTGTGGCGAAAGC
EW732228       <-- CCTGTGTTTATCTTATTGATTCCTTCAATAGCTGAAACTGTGGCGAAAGC
EY947116       <-- CCTGTGTTTATCTTATTGATTCCTTCAGTAGCTGAAACTGTGGCGAAAGC
FY429475       <-- CCTGTGTTTATCTTGTTGATTCCTTCAATAGCTGAAACTGTGGCGAAAGC
FD549930       <-- CCTGTGTTTATCTTGTTGATTCCTTCAATAGCTGAAACTGTGGCGAAAGC
FD564358       <-- CCTGTGTTTATCTTATTGATTCCTTCAATAGCTGAAACTGTGGCGAAAGC
FD956613       <-- CCTGTGTTTATCTTATTGATTCCTTCAATAGCTGAAGCTGTGGCGAAAGC
EY945810       <-- CCTGTGTTTATCTTGTTGATTCCTTCAATAGCTGAAACTGTGGCGAAAGC
FD552138       <-- CCTGTGTTTATCTTGTTGATTCCTTCAATAGCTGAAACTGTGGCGAAAGC
FD556500       <-- CCTGTGTTTATCTTATTGATTCCTTCAATAGCTGAAACTGTGGCGAAAGC
FD979872       <-- CCTGTGTTTATCTTGTTGATTCCTTCAATAGCTGAAACTGTGGCGAAAGC
FD561699       <-- CCTGTGTTTATCTTGTTGATTCCTTCAATAGCTGAAACTGTGGCGAAAGC
FD578632       <-- CCTGTGTTTATCTTGTTGATTCCTTCAATAGCTGAAACTGTGGCGAA-GC
FD580234       <-- CCTGTGTTTATCTTGTTGATTCCTTCAATAGCTGAAACTGTGGCGAAAGC
EW717045       <-- CCTGTGTTTATCTTATTGATTCCTTCAATAGCTGAAACTGTGGCGAAAGC
FD561381       <-- CCTGTGTTTATCTTATTGATTCCTTCAATAGCTGAAACTGTGGCGAAAGC
FD972357       <-- CCTGTGTTTATCTTGTTGATTCCTTCAATAGCTGAAACTGTGGCGAAAGC
EV537834       <-- CCTGTGTTTATCTTGTTGATTCCTTCAATAGCTGAAACTGTGGCGAAAGC
FD964888       <-- CCTGTGTTTATCTTGTTGATTCCTTCAATAGCTGAAACTGTGGCGAAAGC
EX903787       <-- CCTGTGTTTATCTTATTGATTCCTTCAATAGCTGAAACTGTGGCGAAAGC
FD564194       <-- CCTGTGTTTATCTTATTGATTCCTTAAATAGCTGAAACTGTGGCGAAAGC
FD573758       --> ..................................................
FD565560       --> ..................................................
FD538860       --> ..................................................
EV573474       --> ..................................................
FD547965       --> CCTGTGTTTATCTTGTTGATTCCTTCAATAGCTGAAACTGTGGCGAAAGC
FD975845       --> CCTGTGTTTATCTTGTTGATTCCTTCAATAGCTGAAACTGTGGCGAA...
EY942015       --> ..................................................
FD546082       --> ..................................................
FD567737       --> ..................................................
FD967248       --> CCTGTGTTTATCTTGTTGATTCCTTCAATAGCTGAAACTGTGGCGAAAGC
EX753470       --> ACTGTGTTTATCTTGTTGATTCCTTCAATAGCTGAAACTGTGGCGAAAGC
FD531681       --> CCTGTGTTTATCTTGTTGATTCCTTCAATAGCTGAAACTGTGGCGAAAGC
EW737001       --> CCTGTGTTTATCTTATTGATTCCTTCAATAGCTGAAACTGTGGCGAAAGC
FD968086       --> ..................................................
EW720644       --> CCTGTGTTTATCTTATTGATTCCTTCAATAGCTGAAACTGTGGCGAAAGC
EX759525       --> CCTGTGTTTATCTTGTTGATTCCTTCAATAGCTGAAACTGTGGCGAAAGC
FD545941       --> CCTGTGTTTATCTTGTTGATTCCTTCAATAGCTGAAACTGTGGCGAAAGC
FD968262       --> CCTGTGTTTATCTTGTTGATTCCTTCAATAGCTGAAACTGTGGCGAAAGC
EX907789       --> CCTGTGTTTATCTTATTGATTCCTTCAATAGCTGAAACTGTGGCGAAAGC
FD567862       --> ..................................................
EW736633       --> CCTGTGTTTATCTTATTGATTCCTTCAATAGCTGAAACTGTGGCGAAAGC

               901    -    951
UN21928        --> CCAGCAGCCTCCGCATTTTCCTTGATCTCTAATAGGAGTCACAGCACCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD550092       <-- ..................................................
EW732524       <-- CCAGCAGCCTCCGCATTTTCCTTGATCTCTAATAGGAGTCACAGCACCTT
EW732228       <-- CCAGCAGCCTCCGCATTTTCCTTGATCTCTAATAGGAGTCACAGCACCTT
EY947116       <-- CCAGCAGCCTCCGCATTTTCCTTGATCTCTAATGGGAGTCACAGCACCTT
FY429475       <-- CCAGCAGCCTCCGCATTTTCCTTGATCTCTAATAGGAGTCACAGCACCTT
FD549930       <-- CCAGCAGCCTCCGCATTTTCCTTGATCTCTAATAGGAGTCACAGCACCTT
FD564358       <-- CCAGCAGCCTCCGCATTTTCCTTGATCTCTAATAGGAGTCACAGCACCTT
FD956613       <-- CCAGCAGCCTCCGCATTTTCCTTGATCTCTAATAGGAGTCACAGCACCTT
EY945810       <-- CCAGCAGCCTCCGCATTTTCCTTGATCTCTAATAGGAGTCACAGCACCTT
FD552138       <-- CC-GCAGCCTCCGCATTTTCCTTGATCTCTAATAGGAGTCACAGCACCTT
FD556500       <-- CCAGCAGCCTCCGCATTTTCCTTGATCTCTAATAGGAGTCACAGCACCTT
FD979872       <-- CCAGCAGCCTCCGCATTTTCCTTGATCTATAATAGGAGTCACAGCACCTT
FD561699       <-- CCAGCAGCCTCCGCATTTTCCTTGATCTCTAATAGGAGTCACAGCACCTT
FD578632       <-- CCAGCAGCCTCCGCATTTTCCTTGATCTCTAATAGGAGTCACAGCACCTT
FD580234       <-- CCAGCAGCCTCCGCATTTTCCTTGATCTCTAATAGGAGTCACAGCACCTT
EW717045       <-- CCAGCAGCCTCCGCATTTTCCTTGATCTCTAATAGGAGTCACAGCACCTT
FD561381       <-- CCAGCAGCCTCCGCATTTTCCTTGATCTCTAATAGGAGTCACAGCACCTT
FD972357       <-- CCAGCAGCCTCCACATTTTCCTTGATCTCTAATAGGAGTCACAGC.....
EV537834       <-- CCAACAGCCTCCGCATTTTCCTTGATCTCTAATAGGAGTCACAGCACCTT
FD964888       <-- CCAGCAGCCTCCGCATTTTCCTTGATCT-TAATAGGAGTCACAGCACCTT
EX903787       <-- CCAGCAGCCTCCGCATTTTCCTTGATCTCTAATAGGAGTCACAGCACCTT
FD564194       <-- CCAGCAGCCTCCGCATTTTCCTTGATCTCTAATAGGAGTCACAGCACCTT
FD573758       --> ..................................................
FD565560       --> ..................................................
FD538860       --> ..................................................
EV573474       --> ..................................................
FD547965       --> CC-GCAGCCTCCGCATTTTCCTTGATCTCTAATAG-AGTCACAGCAC...
FD975845       --> ..................................................
EY942015       --> ..................................................
FD546082       --> ..................................................
FD567737       --> ..................................................
FD967248       --> CCAGCAGCCTACACATTTTCCTTGATCTC.....................
EX753470       --> CCAGCAGCCTCCGCATTTTCCTTGATCTCTA...................
FD531681       --> CCAGCAGCCTCCGCATTTTCCTTGATCTC.....................
EW737001       --> CCAGCAGCCTCCGCATTTTCCTTGATCTCTAATAGGAGTCACAGCACCTT
FD968086       --> ..................................................
EW720644       --> CCAGCAGCCTCCGCATTTTCCTTGATC.......................
EX759525       --> CCAGCAGCCTCCACATTTTCCTTGATCTCTA...................
FD545941       --> CCAGCAGCCTCCGCATTT................................
FD968262       --> CCAGCAGCCTCCACAT..................................
EX907789       --> CCAGCAGCCTCCGCATTTTCCTTGATCTCTAATAGGAGTCACAGCACCTT
FD567862       --> ..................................................
EW736633       --> CCAGCAGCCTCCGCATTTTCCTTGATCTCTAATAGGAGTCACAGCACCTT

               951    -   1001
UN21928        --> CTTTCCTCCAGTCCACAGCGGCCGGCACATTGCCTGATGGTTCACAAGCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD550092       <-- ..................................................
EW732524       <-- CTTTCCTCCAGTCCACAGCGGCCGGCACc.....................
EW732228       <-- CTTTCCTCCAGTCCACAGCGGCCGGCACc.....................
EY947116       <-- CTTTCCTCCAGTCCACAGCGGCCGGCACATTGCCTGATGGTTCACAAGCC
FY429475       <-- CTTTCCTCCAGTCCACAGCGGCCGGCACATTGCCTGATGGTTCACAAGCC
FD549930       <-- CTTTCCTCCAGTCCACAGCGGCCGGCACATTGCCTGATGGTTCACAAGCC
FD564358       <-- CTTTCCTCCAGTCCACAGCGGCCGGGACATTGCCTGATGGTTCACAAGCC
FD956613       <-- CTTTCCTCCAGTCCACAGCGGCCGGCACATTGCCTGATGGTTCACAAGCC
EY945810       <-- CTTTCCTCCAGTCCACAGCGGCCGGCACATTGCCTGATGGTTCACAAGCC
FD552138       <-- CTTTCCTCCAGTCCACAGCGGCCGGCACATTGCCTGATGGTTCACAAGCC
FD556500       <-- CTTTCCTCCAGTCCACAGCGGCCGGCACATTGCCTGATGGTTCACAAGCC
FD979872       <-- CTTTCCTCCAGTCCACAGCGGCCGGCACATTGCCTGATGGTTCACAAGCC
FD561699       <-- CTTTCCTCCAGTCCACAGCGGCCGGCACATTGCCTGATGGTTCACAAGCC
FD578632       <-- CTTTCCTCCAGTCCACAGCGGCCGGCACATTGCCTGATGGTTCACAAGCC
FD580234       <-- CTTTCCTCCAGTCCACAGCGGCCGGCACATTGCCTGATGGTTCACAAGCC
EW717045       <-- CTTTCCTCCAGTCCACGGCGGCCGGCACATTGCCTGATGGTTCACAAGCC
FD561381       <-- CTTTCCTCCAGTCCACAGCGGCCGGCACATTGCCTGATGGTTCACAAGCC
FD972357       <-- ..................................................
EV537834       <-- CTTTCCTCCAGTCCACAGCGGTCGGCACATTGCCTGATGGTTCACAAGCC
FD964888       <-- CTTTCCTCCAGTCCACAGCGGCCGGCACATTGCCTGATGGTTCACAAGCC
EX903787       <-- CTTTCCTCCAGTCCACAGCGGCCGGCACATTGCCTGATGGTTCACAAGCC
FD564194       <-- CTTTCCTCCAGTCCACAGCGGCCGGCACATTGCCTGATGGTTCACAAGCC
FD573758       --> ..................................................
FD565560       --> ..................................................
FD538860       --> ..................................................
EV573474       --> ..................................................
FD547965       --> ..................................................
FD975845       --> ..................................................
EY942015       --> ..................................................
FD546082       --> ..................................................
FD567737       --> ..................................................
FD967248       --> ..................................................
EX753470       --> ..................................................
FD531681       --> ..................................................
EW737001       --> CTTTCCTCCAGTCCACAGCGGCCGGCACc.....................
FD968086       --> ..................................................
EW720644       --> ..................................................
EX759525       --> ..................................................
FD545941       --> ..................................................
FD968262       --> ..................................................
EX907789       --> CTTTCCTCCAGTCCACAGCGGCCGGCACATTGCCTGATGGTTCACA-GCC
FD567862       --> ..................................................
EW736633       --> CTTTCCTCCAGTCCACAGCGGCCGGCACc.....................

               1001   -   1051
UN21928        --> CGCACATAGTCGCTGTTTAACCTCAAGGAAGACGTGTTCAACCCGAGAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD550092       <-- ..................................................
EW732524       <-- ..................................................
EW732228       <-- ..................................................
EY947116       <-- CGCA-ATAGTCGCTGTTTAACCTCAAGGAAGACGTGTTCAACCCGAGAAA
FY429475       <-- CGCACATAGTCGCTGTTTAACCTCAAGGAAGAGGTGTTCAACCCGAGAAA
FD549930       <-- CGCACATAGTCGCTGTTTAACCTCAAGGAAGACGTGTTCAACCCGAGAAA
FD564358       <-- CGCACATAGTCGCTGTTTAACCTCAAGGAAGACGTGTTCAACCCGAGAAA
FD956613       <-- CGCACATAGTCGCTGTTTAACCTCAAGGAAGACGTGTTCAACCCGAGAAA
EY945810       <-- CGCACATAGTCGCTGTTTAACCTCAAGGAAGAGGTGTTCAACCCGAGAAA
FD552138       <-- CGCACATAGTCGCTGTTCAACCTCAAGGAAGACGTGTTCAACCCGAGAAA
FD556500       <-- CGCACATAGTCGCTGTTTAACCTCAAGGAAGACGTGTTCAACCCGAGAAA
FD979872       <-- CGCA-ATAGTCGCTGTTTAACCTCAAGGAAGACGTGTTCAACCCGAGAAA
FD561699       <-- CGCACATAGTCGCTGTTTAACCTCAAGGAAGACGTGTTCAACCCGAGAAA
FD578632       <-- CGCA-ATAGTCGCTGTTTAACCTCAAGGAAGAGGTGTTCAACCCGAGAAA
FD580234       <-- CGCACATAGTCGCTGTTTAACCTCAAGGAAGAGGTGTTCAACCCGAGAAA
EW717045       <-- CGCACATAGTCGCTGTTTAACCTCAAGGAAGACGTGTTCAACCCGAGAAA
FD561381       <-- CGCACATAGTCGCTGTTTAACCTCAAGGAAGACGTGTTCAACCCGAGAAA
FD972357       <-- ..................................................
EV537834       <-- CGCACATAGTCGCTGTTTAACCTCAAGGAAGACGTGTTCAACCCGAGAAA
FD964888       <-- CGCACATAGTCGCTGTTTAACCTCAAGGAAGACGTGTTCAACCCGAGAAA
EX903787       <-- CGCACATAGTCGCTGTTTAACCTCAAGGAAGACGTGTTCAACCCGAGAAA
FD564194       <-- CGCACATAGTCGCTGTTTAACCTCAAGGAAGACGCGTTCAACCCGAGAAA
FD573758       --> ..................................................
FD565560       --> ..................................................
FD538860       --> ..................................................
EV573474       --> ..................................................
FD547965       --> ..................................................
FD975845       --> ..................................................
EY942015       --> ..................................................
FD546082       --> ..................................................
FD567737       --> ..................................................
FD967248       --> ..................................................
EX753470       --> ..................................................
FD531681       --> ..................................................
EW737001       --> ..................................................
FD968086       --> ..................................................
EW720644       --> ..................................................
EX759525       --> ..................................................
FD545941       --> ..................................................
FD968262       --> ..................................................
EX907789       --> CGCACATAGTCGCTGTTTA-CCTCAAGGA-GACGTGTTCA-CCCGA....
FD567862       --> ..................................................
EW736633       --> ..................................................

               1051   -   1101
UN21928        --> ATTGGCCTTAAACTCAGAGTTGGTCATGTCAGCAAATCTGTTTTCCGCTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD550092       <-- ..................................................
EW732524       <-- ..................................................
EW732228       <-- ..................................................
EY947116       <-- ATTGGCCTTA........................................
FY429475       <-- ATTGGCCTTAAATTCAGAGTTGGTCATGTCAGCAAATCTGTTTTCCGCTA
FD549930       <-- ATTGGCCTTAAACTCAGAGTTGGTCATGTCAGCAAATCTGTTTTCCGCTA
FD564358       <-- ATTGGCCTTAAACTCAGAGTTGGTCATGTCAGCAAATCTGTTTTCCGCTA
FD956613       <-- ATTGGCCTTAAACTCAGAGTTGGCCATGTCAGCAAATCTGTTTTCCGCTA
EY945810       <-- ATTGGCCTTAAATTCAGAGTTGGTCATGTCAGCAAATCTGTTTTCCGCTA
FD552138       <-- ATTGGCCTTAAACTCAGAGTTGGTCATGTCAGCAAATCTGTTTTCCGCTA
FD556500       <-- ATTGGCCTTAAACTCAGAGTTGGTCATGTCAGCAAATCTGTTTTCCGCTA
FD979872       <-- ATTGGCCTTAAACTCAGAGTTGGTCATGTCAGCAAATCTGGTTTCCGCTA
FD561699       <-- ATTGGCCTTAAACTCAGAGTTGGTCATGTCAGCAAATCTGTTTTCCGCTA
FD578632       <-- ATTGGCCTTAAATTCAGAGTTGGTCATGTCAGCAAATCTGTTTTCCGCTA
FD580234       <-- ATTGGCCTTAAATTCAGAGTTGGTCATGTCAGCAAATCTGTTTTCCGCTA
EW717045       <-- ATTGGCCTTAAACTCAGAGTTGGTCATGTCAGCAAATCTGTTTTCCGCTA
FD561381       <-- ATTGGCCTTAAACTCAGAGTTGGTCATGTCAGCAAATCTGTTTTCCGCTA
FD972357       <-- ..................................................
EV537834       <-- ATTGGCCTTAAATTCAGAGTTGGTCATGTCAGCAAATCTGTTTTCCGCTA
FD964888       <-- ATTGGCCTTAAATTCAGAGTTGc...........................
EX903787       <-- ATTGGCCTTAAACTCAGAGTTGGTCATGTCAGCAAATCTGTTTTCCGCTA
FD564194       <-- ATTGGCCTTAAACTCAGAGTTGGTCATGTCAGCAAATCTGTTTTCCGCTA
FD573758       --> ..................................................
FD565560       --> ..................................................
FD538860       --> ..................................................
EV573474       --> ..................................................
FD547965       --> ..................................................
FD975845       --> ..................................................
EY942015       --> ..................................................
FD546082       --> ..................................................
FD567737       --> ..................................................
FD967248       --> ..................................................
EX753470       --> ..................................................
FD531681       --> ..................................................
EW737001       --> ..................................................
FD968086       --> ..................................................
EW720644       --> ..................................................
EX759525       --> ..................................................
FD545941       --> ..................................................
FD968262       --> ..................................................
EX907789       --> ..................................................
FD567862       --> ..................................................
EW736633       --> ..................................................

               1101   -   1151
UN21928        --> AGTTAAAGGACAAGTGGAGGGAGTTGACATAGTCAATCCACTGGAGATTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD550092       <-- ..................................................
EW732524       <-- ..................................................
EW732228       <-- ..................................................
EY947116       <-- ..................................................
FY429475       <-- AGTTAAAGGACAAGTGGAGGGAGTTGACATAGTCAATCCACTGGAGATTA
FD549930       <-- AGTTAAAGGACAAGTGGAGGGAGTTGACATAGTCAATCCACTGGAGATTA
FD564358       <-- AGTTAAAGGACAAGTGGAGGGAGTTGACATAGTCAATCCACCGGAGATTA
FD956613       <-- AGTTAAAGGACAAGTGGAGGGAGTTGACATAGTCAATCCACTGGAGATTA
EY945810       <-- AGTTAAAGGACAAGTGGAGAGAGTTGACATAGTCAATCCACTGGAGATTA
FD552138       <-- AGTTAAAGGACAAGTGGAGGGAGTTGACATAGTCAATCCACTGGAGATTA
FD556500       <-- AGTTAAAGGACAAGTGATGGGAGTTGACATAGTCAATCCACTGGAGATTA
FD979872       <-- AGTTAAAGGACAAGTGGAGGGAGTTGACATAGTCAATCCACTGGAGATTA
FD561699       <-- AGTTAAAGGACAAGTGGAGGGAGTTGACATAGTCAATCCACTGGAGATTA
FD578632       <-- AGTTAAAGGAGAGGTGGAGGGAGTTGACATAGTCAATCCACTGGAGATTA
FD580234       <-- AGTTAAAGGACAAGTGGAGGGAGTTGACATAGTCAATCCACTGGAGATTA
EW717045       <-- AGTTAAAGGACAAGTGGAGGGAGTTGACATAGTCAATCCACTGGAGATTA
FD561381       <-- AGTTAAAGGACAAGTGGAGGGAGTTGACATAGTCAATCCACTGGAGATTA
FD972357       <-- ..................................................
EV537834       <-- AGTTAAAGGACAAGTGGAGGGAGTTGACATAGTCAATCCACTGGAGATTA
FD964888       <-- ..................................................
EX903787       <-- AGTTAAAGGACAAGTGGAGGGAGTCGACATAGTCAATCCACTGGAGATTA
FD564194       <-- AGTTAAAGGACAAGTGGAGGGAGTTGACATAGTCAATCCACTGGAGATTA
FD573758       --> ..................................................
FD565560       --> ..................................................
FD538860       --> ..................................................
EV573474       --> ..................................................
FD547965       --> ..................................................
FD975845       --> ..................................................
EY942015       --> ..................................................
FD546082       --> ..................................................
FD567737       --> ..................................................
FD967248       --> ..................................................
EX753470       --> ..................................................
FD531681       --> ..................................................
EW737001       --> ..................................................
FD968086       --> ..................................................
EW720644       --> ..................................................
EX759525       --> ..................................................
FD545941       --> ..................................................
FD968262       --> ..................................................
EX907789       --> ..................................................
FD567862       --> ..................................................
EW736633       --> ..................................................

               1151   -   1201
UN21928        --> GACTGGTATATCCCAAACCTAAACATCCACTCATCCTTTTCTACATATGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD550092       <-- ..................................................
EW732524       <-- ..................................................
EW732228       <-- ..................................................
EY947116       <-- ..................................................
FY429475       <-- GACTGGTATATCCCAAACCTAAACATCCACTCATCCTTTTCTCCATATGA
FD549930       <-- GACTGGTATATCCCAAACCTAAACATCCACTCATCCTTTTCTTCATATGA
FD564358       <-- GACTGGTATATCCCAAACCTATACATCCACTCATCCTTTTCTACATATGA
FD956613       <-- GACTGGTATATCCCAAACCTATACATCCACTCATCCTTTTCTACATATGA
EY945810       <-- GACTGGTATGTCCCAAACCTAAACATCCACTCATCCTTTTCTTCATATGA
FD552138       <-- GACTGGTATATCCCAAACCTAAACATCCACTCATCCTTTTCTTCATATGA
FD556500       <-- GACTGGTATATCCCAAACCTATAC-TCCACTCATCCTTTTCTACATATGA
FD979872       <-- GACTGGTATATCCCAAACCTAAACATCCACTCATCCTTTTCTTCATATGA
FD561699       <-- GACTGGTATATCCCAAACCTAAACATCCACTCATCCTTTTCTTCATATGA
FD578632       <-- GACTGGTATATCCCAAACCTAAACATCCACTCATCCTTTTCTCCATATGA
FD580234       <-- GACTGGTATATCCCAAACCTAAACATCCACTCATCCTTTTCTCCATATGA
EW717045       <-- GACTGGTATATCCCAAACCTATACATCCACTCATCCTTTTCTACATATGA
FD561381       <-- GACTGGTATATCCCAAACCTATACATCCACTCATCCTTTTCTACATATGA
FD972357       <-- ..................................................
EV537834       <-- GACTGGTATATCCCAAACCTAAACATCCACTCATCCTTTTCTCCATATGA
FD964888       <-- ..................................................
EX903787       <-- GACTGGTATATCCCAAACCTATACATCCACTCATCCTTTTCTACATATGA
FD564194       <-- GACTGGTATACCCCAAACCTATACATCCACTCATCCTTTTCTACATATGA
FD573758       --> ..................................................
FD565560       --> ..................................................
FD538860       --> ..................................................
EV573474       --> ..................................................
FD547965       --> ..................................................
FD975845       --> ..................................................
EY942015       --> ..................................................
FD546082       --> ..................................................
FD567737       --> ..................................................
FD967248       --> ..................................................
EX753470       --> ..................................................
FD531681       --> ..................................................
EW737001       --> ..................................................
FD968086       --> ..................................................
EW720644       --> ..................................................
EX759525       --> ..................................................
FD545941       --> ..................................................
FD968262       --> ..................................................
EX907789       --> ..................................................
FD567862       --> ..................................................
EW736633       --> ..................................................

               1201   -   1251
UN21928        --> TTTTCCGTGGTATTGAAGCCATTCTCCGAACTGCTTCTTCATCAGGGTGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD550092       <-- ..................................................
EW732524       <-- ..................................................
EW732228       <-- ..................................................
EY947116       <-- ..................................................
FY429475       <-- TTTTCCGTGGTATTGAAGCCATTCTCCGAACTGCTTCTTCATCAGGGTGT
FD549930       <-- TTTTCCGTGGTATTGAAGCCATTCTCCGAACTGCTTCTTCATCAGGGTGT
FD564358       <-- TTTTCCGTGGTATTGAAGCCATTCTCCGAACTGCTTCTTCATCAGGGTGT
FD956613       <-- TTTTCCGTGGTATTGAAGCCATTCTCCGAACTGCTTCTTCATCAGGGTGT
EY945810       <-- TTTTCCGTGGTATTGAAGCCATTCTCCGAACTGCTTCTTAATCAGGGTGT
FD552138       <-- TTTTCCGTGGTATTGAAGCCATTCTCCGAACTGCTTCTTCATCAGGGTGT
FD556500       <-- TTTTCCGTGGTATTGAAGCCATTCTCCGAACTGCTTCTTCATCAGGGTGT
FD979872       <-- TTTTCCGTGGTATTGAAGCCATTCTCCGAACTGCTTCTTCATCAGGGTGT
FD561699       <-- TTTTCCGTGGTATTGAAGCCATTCTCCGAACTGCTTCTTCATCAGGGTGT
FD578632       <-- TTTTCCGTGGTATTGAAGCCATTCTCCGAACTGCTTCTTCATCAGGGTGT
FD580234       <-- TTTTCCGTGGTATTGAAGCCATTCTCCGAACTGCTTCTTCATCAGGGTGT
EW717045       <-- TTTTCCGTGGTATTGAAGCCATTCTCCGAACTGCTTCTTCATCAGGGTGT
FD561381       <-- TTTTCCGTGGTATTGAAGCCATTCTCCGAACTGCTTCTTCATCAGGGTGT
FD972357       <-- ..................................................
EV537834       <-- TTTTCCGTGGTATTGAGGCCATTCTCCGAACTGCTTCTTCATCAGGGTGT
FD964888       <-- ..................................................
EX903787       <-- TTTTCCGTGGTATTGAAGCCATTCTCCGAACTGCTTCTTCATCAGGGTGT
FD564194       <-- TTTTCCGTGGTATTGAAGCCATTCTCCGAACTGCTTCTTCATCAGGGTGT
FD573758       --> ..................................................
FD565560       --> ..................................................
FD538860       --> ..................................................
EV573474       --> ..................................................
FD547965       --> ..................................................
FD975845       --> ..................................................
EY942015       --> ..................................................
FD546082       --> ..................................................
FD567737       --> ..................................................
FD967248       --> ..................................................
EX753470       --> ..................................................
FD531681       --> ..................................................
EW737001       --> ..................................................
FD968086       --> ..................................................
EW720644       --> ..................................................
EX759525       --> ..................................................
FD545941       --> ..................................................
FD968262       --> ..................................................
EX907789       --> ..................................................
FD567862       --> ..................................................
EW736633       --> ..................................................

               1251   -   1301
UN21928        --> TGTGTGGGTTGTACACAGAAGAATTGGCGGAACACAGCCTTGAAGGTATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD550092       <-- ..................................................
EW732524       <-- ..................................................
EW732228       <-- ..................................................
EY947116       <-- ..................................................
FY429475       <-- TGTGTGGGTTGTACACAGAAGAATTGGCGGAACACAGCCTTGAAGGTATC
FD549930       <-- TGTGTGGGTTGTACACAGAAGAATTGACGGAACAGAGCCTTGAAGGTATC
FD564358       <-- TGTGTGGGTTGTACACAGAAGAATTGGCGGAACACAGCCTTGAAGCTATC
FD956613       <-- TGTGTGGGTTGTACACAGAAGAATTGGCGGAACACAGCCTTGAAGCTATC
EY945810       <-- TGTGTGGGTTGCACACAGAAGAATTGGCGGAACACAGCCTTGAAGGTATC
FD552138       <-- TGTGTGGGTTGTACACAGAAGAATTGACGGAACAGAGCCTTGAAGGTATC
FD556500       <-- TGTGTGGGTTGTACACAGAAGAATTGACGGAACAGAGCCTTGAAGCTATC
FD979872       <-- TGTGTGGGTTGTACACAGAAGAATTGACGGAACAGAGCCTTGAAGGTATC
FD561699       <-- TGTGTGGGTTGTACACAGAAGAATTGACGGAACAGAGCCTTGAAGGTATC
FD578632       <-- TGTGTGGGTTGTACACAGAAGAATTGGCGGAACACAGCCTTGAAGGTATC
FD580234       <-- TGTGTGGGTTGTACACAGAAGAATTGGCGGAACACAGCCTTGAAGGTATC
EW717045       <-- TGTGTGGGTTGTACACAGAAGAATTGGCGGAACACAGCCTTGAAGCTATC
FD561381       <-- TGTGTGGGTTGTACACAGAAGAATTGGCGGAACACAGCCTTGAAGCTATC
FD972357       <-- ..................................................
EV537834       <-- TGTGTGGGTTGTACACAGAAGAATTGGCGGAACACAGCCTTGAAGCTATC
FD964888       <-- ..................................................
EX903787       <-- TGTGTGGGTTGTACACAGAAGAATTGGCGGAACACAGCCTTGAAGCTATC
FD564194       <-- TGTGTGGGTTGTACACAGAAGAATTGGCGGAACACAGCCTTGAAGCTATC
FD573758       --> ..................................................
FD565560       --> ..................................................
FD538860       --> ..................................................
EV573474       --> ..................................................
FD547965       --> ..................................................
FD975845       --> ..................................................
EY942015       --> ..................................................
FD546082       --> ..................................................
FD567737       --> ..................................................
FD967248       --> ..................................................
EX753470       --> ..................................................
FD531681       --> ..................................................
EW737001       --> ..................................................
FD968086       --> ..................................................
EW720644       --> ..................................................
EX759525       --> ..................................................
FD545941       --> ..................................................
FD968262       --> ..................................................
EX907789       --> ..................................................
FD567862       --> ..................................................
EW736633       --> ..................................................

               1301   -   1351
UN21928        --> AGCACAAAGCAAATCAAAACGACAAGGGTCAGGTTAGCATTTCTTAGTAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD550092       <-- ..................................................
EW732524       <-- ..................................................
EW732228       <-- ..................................................
EY947116       <-- ..................................................
FY429475       <-- AGCACAAAGCAAATCAAAACGACAAGGGTCAGG.................
FD549930       <-- AGCACAAAGCAAATCAAAACGACAAGGGTCAGGTTAGCATTTCTTAGTAC
FD564358       <-- AGCACAAAGCAAATCAAAACAACAAGGGTCAGGTTAGCATTTCTTAGTAC
FD956613       <-- AGCACAAAGCAAATCAAAACAACAAGGGTCAGGTTAGCATTTCTTAGTAC
EY945810       <-- AGCACAAAGCAAATCAAAACGACAAGGGTCAGGTTAGCATTTCTTAGTAC
FD552138       <-- AGCACAAAGCAAATCAAAACGACAAGGGTCAGGTTAGCATTTCTTAGTAC
FD556500       <-- AGCACAAAGCAAATCAAAACAACAAGGGTCAGGTTAGCATTTCTTAGTAC
FD979872       <-- AGCACAAAGCAAATCAAAACGACAAGGGTCAGGTTAGCATTTCTTAGTAC
FD561699       <-- AGCACAAAGCAAATCAAAACGACAAGGGTCTGGTTAGCATTTCTTAGTAC
FD578632       <-- AGCACAAAGCAAATCAAAACGACAAGGGTCAGGTTAGCATTTCTTAGTAC
FD580234       <-- AGCACAAAGCAAATCAAAACGACAAGGGTCAGGTTAGCATTTCTTAGTAC
EW717045       <-- AGCACAAAGCAAATCAAAACAACAAc........................
FD561381       <-- AGCACAAAGCAAATCAAAACAACAAGGGACAGGTTAGCATTTCTTAGTAC
FD972357       <-- ..................................................
EV537834       <-- AGCACAAAGCAAATCAAAACGACAAGGGTCAGGTTAGCATTTCTTAGTAC
FD964888       <-- ..................................................
EX903787       <-- AGCACAAAGCAAATCAAAACAACAAGGGTCAGGTTAGCATTTCTTAGTAC
FD564194       <-- AGCACAAAGCAAATCAAAACAACGAGGGTCAGGTTAGCATTTCTTAGTAC
FD573758       --> ..................................................
FD565560       --> ..................................................
FD538860       --> ..................................................
EV573474       --> ..................................................
FD547965       --> ..................................................
FD975845       --> ..................................................
EY942015       --> ..................................................
FD546082       --> ..................................................
FD567737       --> ..................................................
FD967248       --> ..................................................
EX753470       --> ..................................................
FD531681       --> ..................................................
EW737001       --> ..................................................
FD968086       --> ..................................................
EW720644       --> ..................................................
EX759525       --> ..................................................
FD545941       --> ..................................................
FD968262       --> ..................................................
EX907789       --> ..................................................
FD567862       --> ..................................................
EW736633       --> ..................................................

               1351   -   1401
UN21928        --> ATTCAACATCTTTCTCTGTTTTAAGTTCC.......
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD550092       <-- ....................................
EW732524       <-- ....................................
EW732228       <-- ....................................
EY947116       <-- ....................................
FY429475       <-- ....................................
FD549930       <-- ATTCAACATCTTTCTCTGTTTTAAGTTCC.......
FD564358       <-- ATTCAACATCTTTCTATGTTTTAAGTTCC.......
FD956613       <-- ATTCAACATCTTTCTATGCTTTAAGTTCC.......
EY945810       <-- ATTCAACATCTTTCTCTGTTTTAAGTTggagtttcc
FD552138       <-- ATTCAACATCTTTCTCTGTTTTAAGTTgcc......
FD556500       <-- ATTCAACATCTTTCTCTGTTTTAAGTTCC.......
FD979872       <-- ATTCAACATCTTTCTCTGTTTTAAGTTCC.......
FD561699       <-- ATTCAACATCTTTCTCTGTTTTAAGTTCC.......
FD578632       <-- ATTCAACATCTTTCTCTGTcttcc............
FD580234       <-- ATTCAACATCTTTCTCTGTTTTAAGTTggcc.....
EW717045       <-- ....................................
FD561381       <-- ATTCAACATCTTTCTATGTTTTAAGTTCC.......
FD972357       <-- ....................................
EV537834       <-- ATTCAACATCTTTCTCTGTTTTAAGTTCC.......
FD964888       <-- ....................................
EX903787       <-- ATTCAACATCTTTCTATGTTTTAAGTTCC.......
FD564194       <-- ATTCAACATCTTTCTATGTTTTAAGTTCC.......
FD573758       --> ....................................
FD565560       --> ....................................
FD538860       --> ....................................
EV573474       --> ....................................
FD547965       --> ....................................
FD975845       --> ....................................
EY942015       --> ....................................
FD546082       --> ....................................
FD567737       --> ....................................
FD967248       --> ....................................
EX753470       --> ....................................
FD531681       --> ....................................
EW737001       --> ....................................
FD968086       --> ....................................
EW720644       --> ....................................
EX759525       --> ....................................
FD545941       --> ....................................
FD968262       --> ....................................
EX907789       --> ....................................
FD567862       --> ....................................
EW736633       --> ....................................