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Alignment for radish unigene UN21932

               1      -     51
UN21932        --> GGAGGAGAAGTCGAAACACTATAGAGCTCCGCTCCCAGTAATGGCGGCGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD984847       <-- ..................................................
EY904394       <-- ..................................................
FD968758       <-- ..................................................
FD537049       <-- ..................................................
EW719787       <-- ..................................................
EY903630       <-- ..................................................
FD963760       --> GGAGGAGAAGTCGAAACACTATAGAGCTCCGCTCCCAGTAATGGCGGCGA
EX902872       --> ..........ggGAAACACTACAGAGCTCCGCTCCCAGTAATGGCGGCGA
EY898394       --> ..........ggGAAACACTATAGAGCTCCGCTCCCAGTAATGGCGGCGA
EY908734       --> ..........ggGAAACACTATAGAGCTCCGCTCCCAGTAATGGCGGCGA
FD954621       --> ..........ggGAAACACTATAGAGCTCCGCTCCCAGTAATGGCGGCGA
FD540582       --> ...............ggACTATAGAGCTCCGCTCCCAGTAATGGCGGCGA
EY898688       --> .................gggATAGAGCTCCGCTCCCAGTAATGGCGGCGA
FD948068       --> ..................ggATAGAGCTCCGCTCCCAGTAATGGCGGCGA
FD972978       --> ..................ggATAGAGCTCCGCTCCCAGTAATGGCGGCGA
EV538693       --> ..................gggTAGAGCTCCGCTCCCAGTAATGGCGGCGA
EW715013       --> ............................ggGCTCCCAGTAATGGCGGCGA
FD989010       --> ..................................................
FD948288       --> ..................................................

               51     -    101
UN21932        --> CATGGACTTCTTTTGTAACCTCCTTTTGTATTTCTTCACCTTCTAATAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD984847       <-- ...............................................AAA  Raphanus raphanistrum subsp. landra
EY904394       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD968758       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD537049       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EW719787       <-- ..................................................  Raphanus sativus var. oleiformis
EY903630       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD963760       --> CATGGACTTCTTTTGTAACCTCCTTTTGTATTTCTTCACCTTCTAATAAA  Raphanus raphanistrum subsp. maritimus
EX902872       --> CATGGACTTCTTTTGTAACCTCCTTTTGTATTTCTTCACCTTCTAATAAA  Raphanus sativus cv Rat-Tail Radish #3870
EY898394       --> CATGGACTTCTTTTGTAACCTCCTTTTGTATTTCTTCACCTTCTAATAAA  Raphanus raphanistrum subsp. maritimus
EY908734       --> CATGGACTTCTTTTGTAACCTCCTTTTGTATTTATTCACCTTCTAATAAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD954621       --> CATGGACTTCTTTTGTAACCTCCTTTTGTATTTCTTCACCTTCTAATAAA  Raphanus sativus cv Rat-Tail Radish #3870
FD540582       --> CATGGACTTCTTTTGTAACCTCCTTTTGTATTTATTCACCTTCTAATAAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY898688       --> CATGGACTTCTTTTGTAACCTCCTTTTGTATTTCTTCACCTTCTAATAAA  Raphanus raphanistrum subsp. maritimus
FD948068       --> CATGGAATTCTTTTGTAACCTCCTTTTGTATTTCTTCACCTTCTAATAAA  Raphanus sativus cv Early Scarlet Globe
FD972978       --> CATGGACTTCTTTTGTAACCTCCTTTTGTATTTATTCACCTTCTAATAAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV538693       --> CATGGACTTCTTTTGTAACCTCCTTTTGTATTTATTCACCTTCTAATAAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EW715013       --> CATGGACTTCTTTTGTAACCTCCTTTTGTATTTCTTCACCTTCTAATAAA  Raphanus sativus var. oleiformis
FD989010       --> ..................................................  Raphanus raphanistrum subsp. landra
FD948288       --> ..................................................  Raphanus sativus cv Early Scarlet Globe

               101    -    151
UN21932        --> CCCTCATACTCATCGTTGAGCGGTCTGTCTTTCCGGAGGCAAACAGTGCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD984847       <-- CCCTCATACTCATCGTTGAGCGGTCTGTCTTTCCGGAGGCAAACAGTGCT  Raphanus raphanistrum subsp. landra
EY904394       <-- ..............GTTGAGCAGTCTGTCTTTCCGGAGGCAAACAGTGCT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD968758       <-- .....................................GGCAAACAGTGCT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD537049       <-- .......................................CAAACAGTGCT  Raphanus raphanistrum subsp. raphanistrum (MS)
EW719787       <-- ..................................................  Raphanus sativus var. oleiformis
EY903630       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD963760       --> CCCTCATACTCATCGTTGAGCGGTCTGTCTTTCCGGAGGCAAACAGTGCT  Raphanus raphanistrum subsp. maritimus
EX902872       --> CCCTCATACTCATCGTTGAGCGGTCTGTCTTTCCGGAGGCAAACAGTGCT  Raphanus sativus cv Rat-Tail Radish #3870
EY898394       --> CCCTCATACTCATCGTTGAGCGGTCTGTCTTTCCGGAGGCAAACAGTGCT  Raphanus raphanistrum subsp. maritimus
EY908734       --> CCGTCGTCCTCATCGTTGAGCAGTCTGTCTTTCCGGAGGCAAACAGTGCT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD954621       --> CCCTCATACTCATCGTTGAGCGGTCTGTCTTTCCGGAGGCAAACAGTGCT  Raphanus sativus cv Rat-Tail Radish #3870
FD540582       --> CCGTCGTCCTCATCGTTGAGCAGTCTGTCTTTCCGGAGGCAAACAGTGCT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY898688       --> CCCTCATACTCATCGTTGAGCGGTCTGTCTTTCCGGAGGCAAACAGTGCT  Raphanus raphanistrum subsp. maritimus
FD948068       --> CCCTCATACTCATCGTTGAGCGGTCTGTCTTTCTGGAGGCAAACAGTGCT  Raphanus sativus cv Early Scarlet Globe
FD972978       --> CCGTCGTCCTCATCGTTGAGCAGTCTGTCTTTCCGGAGGCAAACAGTGCT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV538693       --> CCGTCGTCCTCATCGTTGAGCAGTCTGTCTTTCCGGAGGCAAACAGTGCT  Raphanus raphanistrum subsp. raphanistrum (MS)
EW715013       --> CCCTCATACTCATCGTTGAGCGGTCTGTCTTTCCGGAGGCAAACAGTGCT  Raphanus sativus var. oleiformis
FD989010       --> ........................................AAACAGTGCT  Raphanus raphanistrum subsp. landra
FD948288       --> ..................................................  Raphanus sativus cv Early Scarlet Globe

               151    -    201
UN21932        --> CCC-AACGAACAGATTTCCCAGGATATATGCGTTGTCTAGCAACGACATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD984847       <-- CCCCAACGAACAGATTTCCCAGGATATATGCGTTGTCTAGCAACGACATC  Raphanus raphanistrum subsp. landra
EY904394       <-- CAG-AACGAACAGATTTCCCAGGATATATGCGTTGTCTAGCAACGACATC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD968758       <-- CAG-AACGAACAGATTTCCCAGGATATATGCGTTGTCTAGCAACGACATC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD537049       <-- CAG-AACGAACAGATTTCCCAGGATATATGCGTTGTCTAGCAACGACATC  Raphanus raphanistrum subsp. raphanistrum (MS)
EW719787       <-- ..................................................  Raphanus sativus var. oleiformis
EY903630       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD963760       --> CCC-AACGAGCAGATTTCCCAGGATATATGCGTTGTCTAGCAACGACATC  Raphanus raphanistrum subsp. maritimus
EX902872       --> CCC-AACGAACAGATTTCCCAGGATATATGCGTTGTCTAGCAACTACATC  Raphanus sativus cv Rat-Tail Radish #3870
EY898394       --> CCC-AACGAACAGATTTCCCAGGATATATGCGTTGTCTAGCAACGACATC  Raphanus raphanistrum subsp. maritimus
EY908734       --> CAG-AACGAACAGATTTCCCAGGATATATGCGTTGTCTAGCAACGACATC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD954621       --> CCC-AACGAACAGATTTCCCAGGATATATGCGTTGTCTAGCAACGACATC  Raphanus sativus cv Rat-Tail Radish #3870
FD540582       --> CAG-AACGAACAGATTTCCCAGGATATATGCGTTGTCTAGCAACGACATC  Raphanus raphanistrum subsp. raphanistrum (MS)
EY898688       --> CCC-AACGAACAGATTTCCCAGGATATATGCGTTGTCTAGCAACGACATC  Raphanus raphanistrum subsp. maritimus
FD948068       --> CCC-AACGAACAGATTTCCCAGGATATATGCGTTGTCTAGCAACGACATC  Raphanus sativus cv Early Scarlet Globe
FD972978       --> CAG-AACGAACAGATTTCCCAGGATATATGCGTTGTCTAGCAACGACATC  Raphanus raphanistrum subsp. raphanistrum (MS)
EV538693       --> CAG-AACGAACAGATTTCCCAGGATATATGCGTTGTCTAGCAACGACATC  Raphanus raphanistrum subsp. raphanistrum (MS)
EW715013       --> CCC-AACGAACAGATTTCCCAGGATATATGCGTTGTCTAGCAACGACATC  Raphanus sativus var. oleiformis
FD989010       --> CCC-AACGAACAGATTTCCCAGGATATATGCGTTGTCTAGCAACGACATC  Raphanus raphanistrum subsp. landra
FD948288       --> ..................................................  Raphanus sativus cv Early Scarlet Globe

               201    -    251
UN21932        --> AAAGTCGGGACAAACATAGAAGTCGATAGTGCTCCGTGGCGTGTTCTGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD984847       <-- AAAGTCGGGACAAACATAGAAGTCGATAGTGCTCCGTGGCGTGTTCTGGA  Raphanus raphanistrum subsp. landra
EY904394       <-- AAAGTCGGGACAAACATAGAAGTCGATGGTGCTCCCTGGCGTGTTCTGGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD968758       <-- AAAGTCGGGACAAACATAGAAGTCGATGGTGCTCCCTGGCGTGTTCTGGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD537049       <-- AAAGTCGGGACAAACATAGAAGTCGATGGTGCTCCCTGGCGTGTTCTGGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EW719787       <-- ..................................................  Raphanus sativus var. oleiformis
EY903630       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD963760       --> AAAGTCGGGACAAACATAGAAGTCGATAGTGCTCCGTGGCGTGTTCTGGA  Raphanus raphanistrum subsp. maritimus
EX902872       --> AAAGTCGGGACAAACATAGAAGTCGATAGTGCTCCGTGGCGTGTTCTGGA  Raphanus sativus cv Rat-Tail Radish #3870
EY898394       --> AAAGTCGGGACAAACATAGAAGTCGATAGTGCTCCGTGGCGTGTTCTGGA  Raphanus raphanistrum subsp. maritimus
EY908734       --> AAAGTCGGGACAAACATAGAAGTCGATGGTGCTCCCTGGCGTGTTCTGGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD954621       --> AAAGTCGGGACAAACATAGAAGTCGATAGTGCTCCGTGGCGTGTTCTGGA  Raphanus sativus cv Rat-Tail Radish #3870
FD540582       --> AAAGTCGGGACAAACATAGAAGTCGATGGTGCTCCCTGGCGTGTTCTGGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY898688       --> AAAGTCGGGACAAACATAGAAGTCGATAGTGCTCCGTGGCGTGTTCTGGA  Raphanus raphanistrum subsp. maritimus
FD948068       --> AAAGTCGGGACAAACATAGAAGTCGATAGTGCTCCGTGGCGTGTTCTGGA  Raphanus sativus cv Early Scarlet Globe
FD972978       --> AAAGTCGGGACAAACATAGAAGTCGATGGTGCTCCCTGGCGTGTTCTGGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV538693       --> AAAGTCGGGACAAACATAGAAGTCGATGGTGCTCCCTGGCGTGTTCTGGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EW715013       --> AAAGTCGGGACAAACATAGAAG............................  Raphanus sativus var. oleiformis
FD989010       --> AAAGTCGGGACAAACATAGAAGTCGATAGTGCTCCGTGGCGTGTTCTGGA  Raphanus raphanistrum subsp. landra
FD948288       --> ..................................................  Raphanus sativus cv Early Scarlet Globe

               251    -    301
UN21932        --> GTTTCTTCATGTGAAGCCAGGCAAAGGTGCTGCTTTTGTCAGAACCAAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD984847       <-- GTTTCTTCATGTGAAGCCAGGCAAAGGTGCTGCTTTTGTCAGAACCAAAA
EY904394       <-- GTTTCTTCATGTGAAGCCAGGCAAAGGTGCTGCTTTTGTCAGAACCAAAA
FD968758       <-- GTTTCTTCATGTGAAGCCAGGCAAAGGTGCTGCTTTTGTCAGAACCAAAA
FD537049       <-- GTTTCTTCATGTGAAGCCAGGCAAAGGTGCTGCTTTTGTCAGAACCAAAA
EW719787       <-- ..................................................
EY903630       <-- ..................................................
FD963760       --> GTTTCTTCATGTGAAGCCAGGCAAAGGTGCTGCTTTTGTCAGAACCAAAA
EX902872       --> GTTTCTTCATGTGAAGCCAGGCAAAGGTGCTGCTTTTGTCAGAACCAAAA
EY898394       --> GTTTCTTCATGTGAAGCCAGGCAAAGGTGCTGCTTTTGTCAGAACCAAAA
EY908734       --> GTTTCTTCATGTGAAGCCAGGCAAAGGTGCTGCTTTTGTCAGAACCAAAA
FD954621       --> GTTTCTTCATGTGAAGCCAGGCAAAGGTGCTGCTTTTGTCAGAACCAAAA
FD540582       --> GTTTCTTCATGTGAAGCCAGGCAAAGGTGCTGCTTTTGTCAGAACCAAAA
EY898688       --> GTTTCTTCATGTGAAGCCAGGCAAAGGTGCTGCTTTTGTCAGAACCAAAA
FD948068       --> GTTTCTTCATGTGAAGCCAGGCAAAGGTGCTGCTTTTGTCAGAACCAAAA
FD972978       --> GTTTCTTCATGTGAAGCCAGGCAAAGGTGCTGCTTTTGTCAGAACCAAAA
EV538693       --> GTTTCTTCATGTGAAGCCAGGCAAAGGTGCTGCTTTTGTCAGAACCAAAA
EW715013       --> ..................................................
FD989010       --> GTTTCTTCATGTGAAGCCAGGCAAAGGTGCTGCTTTTGTCAGAACCAAAA
FD948288       --> ..................................................

               301    -    351
UN21932        --> TCAGGAATTACGTCAATGGTAGCACCGTCGAGAGAACCTTTCGTGCCGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD984847       <-- TCAGGAATTACGTCAATGGTAGCACCGTCGAGAGAACCTTTCGTGCCGGA
EY904394       <-- TCAGGAATTACGTCAATGGTAGCACCGTCGAGAGAACCTTTCGTGCCGGA
FD968758       <-- TCAGGAATTACGTCAATGGTAGCACCGTCGAGAGAACCTTTCGTGCCGGA
FD537049       <-- TCAGGAATTACGTCAATGGTAGCACCGTCGAGAGAACCTTTCGTGCCGGA
EW719787       <-- ..................................................
EY903630       <-- ..................................................
FD963760       --> TCAGGAATTACGTCAATGGTAGCACCGTCGAGAGAACCTTTCGTGCCGGA
EX902872       --> TCAGGAATTACGTCAATGGTAGCACCGTCGAGAGAACCTTTCGTGCCGGA
EY898394       --> TCAGGAATTACGTCAATGGTAGCACCGTCGAGAGAACCTTTCGTGCCGGA
EY908734       --> TCAGGAATTACGTCAATGGTAGCACCGTCGAGAGAACCTTTCGTGCCGGA
FD954621       --> TCAGGAATTACGTCAATGGTAGCACCGTCGAGAGAACCTTTCGTGCCGGA
FD540582       --> TCAGGAATTACGTCAATGGTAGCACCGTCGAGAGAACCTTTCGTGCCGGA
EY898688       --> TCAGGAATTACGTCAATGGTAGCACCGTCGAGAGAACCTTTCGTGCCGGA
FD948068       --> TCAGGAATTACGTCAATGGTAGCACCGTCGAGAGAACCTTTCGTGCCGGA
FD972978       --> TCAGGAATTACGTCAATGGTAGCACCGTCGAGAGAACCTTTCGTGCCGGA
EV538693       --> TCAGGAATTACGTCAATGGTAGCACCGTCGAGAGAACCTTTCGTGCCGGA
EW715013       --> ..................................................
FD989010       --> TCAGGAATTACGTCAATGGTAGCACCGTCGAGAGAACCTTTCGTGCCGGA
FD948288       --> ..................................................

               351    -    401
UN21932        --> ATTACTATGGAAGAGGCAAATGTCTTCAAGGAGACCAAGCAATTCACTTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD984847       <-- ATTACTATGGAAGAGGCAAATGTCTTCAAGGAGACCAAGCAATTCACTTA
EY904394       <-- ATTACTATGGAAGAGGCAAATGTCTTCAAGGAGACCAAGCAATTCACTTA
FD968758       <-- ATTACTATGGAAGAGGCAAATGTCTTCAAGGAGACCAAGCAATTCACTTA
FD537049       <-- ATTACTATGGAAGAGGCAAATGTCTTCAAGGAGACCAAGCAATTCACTTA
EW719787       <-- ..................................................
EY903630       <-- ..................................................
FD963760       --> ATTACTATGGAAGAGGCAAATGTCTTCAAGGAGACCAAGCAATTCACTTA
EX902872       --> ATTACTATGGAAGAGGCAAATGTCTTCAAGGAGACCAAGCAATTCACTTA
EY898394       --> ATTACTATGGAAGAGGCAAATGTCTTCAAGGAGACCAAGCAATTCACTTA
EY908734       --> ATTACTATGGAAGAGGCAAATGTCTTCAAGGAGACCAAGCAATTCACTTA
FD954621       --> ATTACTATGGAAGAGGCAAATGTCTTCAAGGAGACCAAGCAATTCACTTA
FD540582       --> ATTACTATGGAAGAGGCAAATGTCTTCAAGGAGACCAAGCAATTCACTTA
EY898688       --> ATTACTATGGAAGAGGCAAATGTCTTCAAGGAGACCAAGCAATTCACTTA
FD948068       --> ATTACTATGGAAGAGGCAAATGTCTTCAAGGAGACCAAGCAATTCACTTA
FD972978       --> ATTACTATGGAAGAGGCAAATGTCTTCAAGGAGACCAAGCAATTCACTTA
EV538693       --> ATTACTATGGAAGAGGCAAATGTCTTCAAGGAGACCAAGCAATTCACTTA
EW715013       --> ..................................................
FD989010       --> ATTACTATGGAAGAGGCAAATGTCTTCAAGGAGACCAAGCAATTCACTTA
FD948288       --> ...........................gAGGAGACCAAGCAATTCACTTA

               401    -    451
UN21932        --> TAAAGACGGCTCTCAGTTTGTTTTCATGGACTTGAGCAGTTATGAGGAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD984847       <-- TAAAGACGGCTCTCAGTTTGTTTTCATGGACTTGAGCAGTTATGAGGAAA  Raphanus raphanistrum subsp. landra
EY904394       <-- TAAAGACGCCTCTCAGTTTGTTTTCATGGACTTGAGCAGTTATGAGGAAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD968758       <-- TAAAGACGCCTCTCAGTTTGTTTTCATGGACTTGAGCAGTTATGAGGAAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD537049       <-- TAAAGACGCCTCTCAGTTTGTTTTCATGGACTTGAGCAGTTATGAGGAAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EW719787       <-- ..................................................  Raphanus sativus var. oleiformis
EY903630       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD963760       --> TAAAGACGGCTCTCAGTTTGTTTTCATGGACTTGAGCAGTTATGAGGAAA  Raphanus raphanistrum subsp. maritimus
EX902872       --> TAAAGACGGCTCTCAGTTTGTTTTCATGGACTTGAGCAGTTATGAGGAAA  Raphanus sativus cv Rat-Tail Radish #3870
EY898394       --> TAAAGACGGCTCTCAGTTTGTTTTCATGGACTTGAGCAGTTATGAGGAAA  Raphanus raphanistrum subsp. maritimus
EY908734       --> TAAAGACGCCTCTCAGTTTGTTTTCATGGACTTGAGCAGTTATGAGGAAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD954621       --> TAAAGACGGCTCTCAGTTTGTTTTCATGGACTTGAGCAGTTATGAGGAAA  Raphanus sativus cv Rat-Tail Radish #3870
FD540582       --> TAAAGACGCCTCTCAGTTTGTTTTCATGGACTTGAGCAGTTATGAGGAAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY898688       --> TAAAGACGGCTCTCAGTTTGTTTTCATGGACTTGAGCAGTTATGAGGAAA  Raphanus raphanistrum subsp. maritimus
FD948068       --> TAAAGACGGCTCTCAGTTTGTTTTCATGGACTTGAGCAGTTATGAGGAAA  Raphanus sativus cv Early Scarlet Globe
FD972978       --> TAAAGACGCCTCTCAGTTTGTTTTCATGGACTTGAGCAGTTATGAGGAAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV538693       --> TAAAGACGCCTCTCAGTTTGTTTTCATGGACTTGAGCAGTTATGAGGAAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EW715013       --> ..................................................  Raphanus sativus var. oleiformis
FD989010       --> TAAAGACGGCTCTCAGTTTGTTTTCATGGACTTGAGCAGTTATGAGGAAA  Raphanus raphanistrum subsp. landra
FD948288       --> TAAAGACGGCTCTCAGTTTGTTTTCATGGACTTGAGCAGTTATGAGGAAA  Raphanus sativus cv Early Scarlet Globe

               451    -    501
UN21932        --> CACGTTTAAACGAGGCTGATATGGGCGACAAGACCAAATGGCTTAAAGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD984847       <-- CACGTTTAAACGAGGCTGATATGGGCGACAAGACCAAATGGCTTAAAGAG
EY904394       <-- CACGTTTAAACGAGGCTGATATGGGCGACAAGACCAAATGGCTTAAAGAG
FD968758       <-- CACGTTTAAACGAGGCCGATATGGGCGACAAGACCAAATGGCTTAAAGAG
FD537049       <-- CACGTTTAAACGAGGCCGATATGGGCGACAAGACCAAATGGCTTAAAGAG
EW719787       <-- ..................................................
EY903630       <-- ..................................................
FD963760       --> CACGTTTAAACGAGGCTGATATGGGCGACAAGACCAAATGGCTTAAAGAG
EX902872       --> CACGTTTAAACGAGGCTGATATGGGCGACAAGACCAAATGGCTTAAAGAG
EY898394       --> CACGTTTAAACGAGGCTGATATGGGCGACAAGACCAAATGGCTTAAAGAG
EY908734       --> CACGTTTAAACGAGGCTGATATGGGCGACAAGACCAAATGGCTTAAAGAG
FD954621       --> CACGTTTAAACGAGGCTGATATGGGCGACAAGACCAAATGGCTTAAAGAG
FD540582       --> CACGTTTAAACGAGGCCGATATGGGCGACAAGACCAAATGGCTTAAAGAG
EY898688       --> CACGTTTAAACGAGGCTGATATGGGCGACAAGACCAAATGGCTTAAAGAG
FD948068       --> CACGTTTAAACGAGGCTGATATGGGCGACAAGACCAAATGGCTTAAAGAG
FD972978       --> CACGTTTAAACGAGGCCGATATGGGCGACAAGACCAAATGGCTTAAAGAG
EV538693       --> CACGTTTAAACGAGGCCGATATGGGCGACAAGACCAAATGGCTTAAAGAG
EW715013       --> ..................................................
FD989010       --> CACGTTTAAACGAGGCTGATATGGGCGACAAGACCAAATGGCTTAAAGAG
FD948288       --> CACGTTTAAACGAGGCTGATATGGGCGACAAGACCAAATGGCTTAAAGAG

               501    -    551
UN21932        --> GGAATGGACTGCAATTTACTCTACTGGAAGGACAAGGTCATCGATTTTGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD984847       <-- GGAATGGACTGCAATTTACTCTACTGGAAGGACAAGGTCATCGATTTTGA
EY904394       <-- GGAATGAACTGCAATTTACTCTACTGGAAGGACAAGGTCATCGATTTTGA
FD968758       <-- GGAATGGACTGCAATTTACTCTGCTGGAAGGACAAGGTCATCGATTTTGA
FD537049       <-- GGGATGGACTGCAATTTACTCTACTGGAAGGACAAGGTCATCGATTTTGA
EW719787       <-- ..................................................
EY903630       <-- ..................................................
FD963760       --> GGAATGGACTGCAATTTACTCTACTGGAAGGACAAGGTCATCGATTTTGA
EX902872       --> GGAATGGACTGCAATTTACTCTACTGGAAGGACAAGGTCATCGATTTTGA
EY898394       --> GGAATGGACTGCAATTTACTCTACTGGAAGGACAAGGTCATCGATTTTGA
EY908734       --> GGAATGAACTGCAATTTACTCTACTGGAAGGACAAGGTCATCGATTTTGA
FD954621       --> GGAATGGACTGCAATTTACTCTACTGGAAGGACAAGGTCATCGATTTTGA
FD540582       --> GGGATGGACTGCAATTTACTCTACTGGAAGGACAAGGTCATCGATTTTGA
EY898688       --> GGAATGGACTGCAATTTACTCTACTGGAAGGACAAGGTCATCGATTTTGA
FD948068       --> GGAATGGACTGCAATTTACTCTACTGGAAGGACAAGGTCATCGATTTTGA
FD972978       --> GGAATGGACTGCAATTTACTCTGCTGGAAGGACAAGGTCATCGATTTTGA
EV538693       --> GGAATGGACTGCAATTTACTCTACTGGAAGGACAAGGTCATCGATTTTGA
EW715013       --> ..................................................
FD989010       --> GGAATGGACTGCAATTTACTCTACTGGAAGGACAAGGTCATCGATTTTGA
FD948288       --> GGAATGGACTGCAATTTACTCTACTGGAAGGACAAGGTCATCGATTTTGA

               551    -    601
UN21932        --> ACTTCCCATTACAGTTCAGCTTAAAATTGTTGACGTTGATCCTGGTCTCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD984847       <-- ACTTCCCATTACAGTTCAGCTTAAAATTGTTGACGTTGATCCTGGTCTCC
EY904394       <-- ACTTCCCATTACAGTTCAGCTTAAAATTGTTGACGTTGATCCTGGTCTCC
FD968758       <-- ACTTCCCATTACAGTTCAGCTTAAAATTGTTGACGTTGATCCTGGTCTCC
FD537049       <-- ACTTCCCATTACAGTTCAGCTTAAAATTGTTGACGTTGATCCTGGTCTCC
EW719787       <-- ............................................gtttcg
EY903630       <-- ..................................................
FD963760       --> ACTTCCCATTACAGTTCAGCTTAAAATTGTTGACGTTGATCCTGGTCTCC
EX902872       --> ACTTCCCATTACAGTTCAGCTTAAAATTGTTGACGTTGATCCTGGTCTCC
EY898394       --> ACTTCCCATTACAGTTCAGCTTAAAATTGTTGACGTTGATCCTGGTCTCC
EY908734       --> ACTTCCCATTACAGTTCAGCTTAAAATTGTTGACGTTGATCCTGGTCTCC
FD954621       --> ACTTCCCATTACAGTTCAGCTTAAAATTGTTGACGTTGATCCTGGTCTCC
FD540582       --> ACTTCCCATTACAGTTCAGCTTAAAATTGTTGACGTTGATCCTGGTCTCC
EY898688       --> ACTTCCCATTACAGTTCAGCTTAAAATTGTTGGCGTTGATCCTGGTCTCC
FD948068       --> ACTTCCCATTACAGTTCAGCTTAAAATTGTTGACGTTGATCCTGGTCTCC
FD972978       --> ACTTCCCATTACAGTTCAGCTTAAAATTGTTGACGTTGATCCTGGTCTCC
EV538693       --> ACTTCCCATTACAGTTCAGCTTAAAATTGTTGACGTTGATCCTGGTCTCC
EW715013       --> ..................................................
FD989010       --> ACTTCCCATTACAGTTCAGCTTAAAATTGTTGACGTTGATCCTGGTCTCC
FD948288       --> ACTTCCCATTACAGTTCAGCTTAAAATTGTTGACGTTGGTCCTGGTCTCC

               601    -    651
UN21932        --> GAGGTGACACTGCACAAGGTGGAACAAAACCTGCCACCCTCGAGACTGG-
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD984847       <-- GAGGTGACACTGCACAAGGTGGAACAAAACCTG.................
EY904394       <-- GAGGTGACACTGCACAAGGTGGAACAAAACCTGCCACCCTCGAGACTGG-
FD968758       <-- GAGGTGACACTGCACAAGGTGGAACAAAACCTGCCACCCTCGAGACTGG-
FD537049       <-- GAGGTGACACTGCACAAGGTGGAACAAAACCTGCCACCCTCGAGACTGG-
EW719787       <-- GAGGTGACACTGCACAAGGTGGAACAAAACCTGCCACCCTTGAGACTGG-
EY903630       <-- ...............................................GG-
FD963760       --> GAGGTGACACTGCACAAAGTGGAACAAAACCTGCCACCCTCGAGACTGG-
EX902872       --> GAGGTGACGCTGCACAAGGTGGAACAAAACCTGCCACCCTCGAGACTGG-
EY898394       --> GAGGTGACACTGCA....................................
EY908734       --> GAGGTGACACTGCACAAGGTGGAACAAAACCTGCCACCCTCGAGACTGG-
FD954621       --> GAGGTGACACTGCACAAGGTGGAACAAAACCTGCCACCCTCGAGACTGG-
FD540582       --> GAGGTGACACTGCACAAGGTGGAACAAAACCTGCCACCCTCGAGACTGG-
EY898688       --> GAGGTGACACTGC.....................................
FD948068       --> GAGGTGACACTGCACAAAGTGGAACAAAACCTGCCACCCTCGAGACTGG-
FD972978       --> GAGGTGACACTGCACAAGGTGGAACAAAACCTGCCACCCTCGAGACTGG-
EV538693       --> GAGGTGACACTGCACAAGGTGGAACAAAACCTGCCACCCTCGAGACTGG-
EW715013       --> ..................................................
FD989010       --> GAGGTGACACTGCACAAGGTGGAACAAAACCTGCCACCCTCGAGACTGGG
FD948288       --> GAGGTGACACTGCACAAGGTGGAACAAAACCTGCCACCCTCGAGACTGG-

               651    -    701
UN21932        --> TGCAGTTGTCAATGTACCCCTCTTTGTCAATGTTGGTGAAGATATCATGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD984847       <-- ..................................................  Raphanus raphanistrum subsp. landra
EY904394       <-- TGCAGTTGTCAATGTACCCCTCTTTGTCAATGTTGGTGAAGATATCATGG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD968758       <-- TGCAGTTGTCAATGTACCCCTCTTTGTCAATGTTGGTGAAGATATCATGG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD537049       <-- TGCAGTTGTCAATGTACCCCTCTTTGTCAATGTTGGTGAAGATATCATGG  Raphanus raphanistrum subsp. raphanistrum (MS)
EW719787       <-- TGCAGTTGTCAATGTACCCCTCTTTGTCAATGTTGGTGAAGATATTATGG  Raphanus sativus var. oleiformis
EY903630       <-- TGCAGTTGTCAATGTACCCCTCTTTGTCAATGTTGGTGAAGATATCATGG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD963760       --> TGCAGTTGTCAATGTACCCCTCTTTGTCAATGTTGGTGAAGATATTATGG  Raphanus raphanistrum subsp. maritimus
EX902872       --> TGCAGTTGTCAATGTACCCCTCTTTGTCAATGTTGGTGAAGATATTATGG  Raphanus sativus cv Rat-Tail Radish #3870
EY898394       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EY908734       --> TGCAGTTGTCAATGTACCCCTCTTTGTCA-TGTTGGTGAAGATATCATGG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD954621       --> TGCAGTTGTCAATGTACCCCTCTTTGTCAATGTTGGTGAAGATATTATGG  Raphanus sativus cv Rat-Tail Radish #3870
FD540582       --> TGCAGTTGTCAATGTACCCCTCTTTGTCAATGTTGGTGAAGATATCATGG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY898688       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD948068       --> TGCAGTTGTCAATGTACCCCTCTTTGTCAATGTTGGTGAAGATATTATGG  Raphanus sativus cv Early Scarlet Globe
FD972978       --> TGCAGTTGTCAATGTACCCCTCTTTGTCAATGTTGGTGAAGATATCATGG  Raphanus raphanistrum subsp. raphanistrum (MS)
EV538693       --> TGCAGTTGTCAATGTACCCCTCTTTGTCAATGTTGGTGAAGATATCATGG  Raphanus raphanistrum subsp. raphanistrum (MS)
EW715013       --> ..................................................  Raphanus sativus var. oleiformis
FD989010       --> TGCAGTTGTCA-TGTACCCCTCTTTGTCAATGTTGGTGAAGATATTATGG  Raphanus raphanistrum subsp. landra
FD948288       --> TG--GTTGTCAATGTACCCCTCTTTGTCAATGTTGGTGAAGATATTATGG  Raphanus sativus cv Early Scarlet Globe

               701    -    751
UN21932        --> TGGACACGAGAACCGGTACCTACATGAGCC-GGGTCTGACACATCTTCCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD984847       <-- ..................................................
EY904394       <-- TGGACACGAGAACCGGTACCTACATGAGCC-GGGTCTGACACATCTTCCT
FD968758       <-- TGGACACGAGAACCGGTACCTACATGAGCC-GGGTCTGACACATCTTCCT
FD537049       <-- TGGACACGAGAACCGGTACCTACATGAGCC-GGGTCTGACACATCTTCCT
EW719787       <-- TGGACACGAGAACCGGTACCTACATGAGCC-GGGTCTGACACATCTTCCT
EY903630       <-- TGGACACGAGAACCGGTACCTACATGAGCC-GGGTTTGACACATTTTCCT
FD963760       --> TGGACACGAGAACCGGTACCTACATGAGCC-GGGTCTGACACATCTTCCT
EX902872       --> TGGACACGAGAACCGGTACCTACATGAGCC-GGGTCTGACACATCTTCCT
EY898394       --> ..................................................
EY908734       --> TGGACACGAGAACCGGTACCTACATGAGCC-GGGTCTGACACATCTTCCT
FD954621       --> TGGACACGAGAACCGGTACCTACATGAGCCCGGGTCTGACACATCTTCCT
FD540582       --> TGGACACGAGAACCGGTACCTACATGAGCC-GGGTCTGACACATCTTCCT
EY898688       --> ..................................................
FD948068       --> TGGACAC...........................................
FD972978       --> TGGACACGAGAACCGGTACCTACATGAGCC-GGGTCTGACACAT......
EV538693       --> TGGACACGAGAACCGGTACCTACATGAGCC-GGGTCTGACACATCTTCCT
EW715013       --> ..................................................
FD989010       --> TGGACACGAGAACCGGTAC-TACATGAGCC-GG-TCTGACACATCTTCCT
FD948288       --> TGGACACGAGAACCGGTACCTACATGAGCC-GGGTCTGACACATCTTCCT

               751    -    801
UN21932        --> TATTGCTAACGACTAAGGGACGTGAGATTTAATGAGCGGTTTTGGTTAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD984847       <-- ..................................................
EY904394       <-- TATTGCTAACGACTAAGGGACGTGAGATTTAATGAGCGGTTTTGGTTAAG
FD968758       <-- TATTGCTAACGACTAAGGGACGTGAGATTTAATGAGCGGTTTTGGTTAAG
FD537049       <-- TATTGCTAACGACTAAGGGACGTGAGATTTAATGAGCGGTTTTGGTTAAG
EW719787       <-- TATTGCTAACGACTAAGGAACGCGAGATTTAATGACCGGTTTTGGTTAAG
EY903630       <-- TATTGCTAACGACTAAGGGACGTGAGATTTAATGAGCGGTTTTGGTTAAG
FD963760       --> TATTGCTA-CGACTAgacgcgagatttatg....................
EX902872       --> TATTGC-GACGACTAAG-AACGCGAGATT-AATGACCGGTTT-GG-TAAG
EY898394       --> ..................................................
EY908734       --> TATTGCTA-CGACTAAGG-ACGTG..........................
FD954621       --> TATTGCTAACGAC.....................................
FD540582       --> TATTGCTAACGACTAAGG-ACGTGAGATTTAATGAGCGGTTTTGGTTA-G
EY898688       --> ..................................................
FD948068       --> ..................................................
FD972978       --> ..................................................
EV538693       --> TATTGCTAACGACTAAGGGACGTGAGATTTAATGAGCGGTTTTGGTTAAG
EW715013       --> ..................................................
FD989010       --> TATTGCTA-CGACTAAG--ACGCGAGATT--ATGACCG-TTTTGGTTA-G
FD948288       --> TATTGCTAACGACTAAGGAACGCGAGATTTAATGACCGGTTTTGGTTAAG

               801    -    851
UN21932        --> AGTCTGATTAGTTGAGTGAATTTCTATTATGGAATATATTGATTTCTTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD984847       <-- ..................................................
EY904394       <-- AGTCTGATTAGTTGAGTGAATTTCTACTGTGGAATATATTGATTTCTTTG
FD968758       <-- AGTCTGATTAGTTGAGTGAATTTCTATTATGGAATATATTGATTTCTTTG
FD537049       <-- AGTCTGATTAGTTGAGTGAATTTCTATTATGGAATATATTGATTTCTTTG
EW719787       <-- AGTCTAATTAGTTGAGTGAATTTCTACTATGGAATATATTGATTTCTTTG
EY903630       <-- AGTTTGATTAGTTGAGTGAATTTTTATTATGGAATATATTGATTTTTTTG
FD963760       --> ..................................................
EX902872       --> AGTCT-AATAGTTGAGTGA-TTTCTAc.......................
EY898394       --> ..................................................
EY908734       --> ..................................................
FD954621       --> ..................................................
FD540582       --> AGTCTGAT..........................................
EY898688       --> ..................................................
FD948068       --> ..................................................
FD972978       --> ..................................................
EV538693       --> AGTCTGATTAGTTGAGTGAATTTCTATTATGGAtata.............
EW715013       --> ..................................................
FD989010       --> AGTC..............................................
FD948288       --> AGTCTAATTAGTTGAGTGAATTTCTACTATGGAATATATTGATTTCTTTG

               851    -    901
UN21932        --> TTGGTCAGTTATTACTATACCTGAGTAGTAAATCCCCACTTTACTTTTAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD984847       <-- ..................................................
EY904394       <-- TTGGTCAGTTATTACTATACCTGAGTAGTAAATCCCCACTTTACTTTc..
FD968758       <-- TTGGTCAGTTATTACTATACCTGAGTAGTAAATCCCCACTTTACTTTTAC
FD537049       <-- TTGGTCAGTTATTACTATACCTGAGTAGTAAATCCCCACTTTACTTTTAC
EW719787       <-- TTGGTCAGTTATTACTATACCTGAGTAGTAAATCCCC.............
EY903630       <-- TTGGTCAGTTATTACTATACCTGAGTAGT.....................
FD963760       --> ..................................................
EX902872       --> ..................................................
EY898394       --> ..................................................
EY908734       --> ..................................................
FD954621       --> ..................................................
FD540582       --> ..................................................
EY898688       --> ..................................................
FD948068       --> ..................................................
FD972978       --> ..................................................
EV538693       --> ..................................................
EW715013       --> ..................................................
FD989010       --> ..................................................
FD948288       --> TTGGTCAGTTATTACTATACCTGAGTAGTAAATCCCCACTTTACTTTc..

               901    -    951
UN21932        --> CTGTGAGATTCGATCACTATGCTTTACTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD984847       <-- .............................
EY904394       <-- .............................
FD968758       <-- CTGTGAGATTCGATCACTATGCTTTACTC
FD537049       <-- CTGTG........................
EW719787       <-- .............................
EY903630       <-- .............................
FD963760       --> .............................
EX902872       --> .............................
EY898394       --> .............................
EY908734       --> .............................
FD954621       --> .............................
FD540582       --> .............................
EY898688       --> .............................
FD948068       --> .............................
FD972978       --> .............................
EV538693       --> .............................
EW715013       --> .............................
FD989010       --> .............................
FD948288       --> .............................