RadishBase

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Alignment for radish unigene UN22024

               1      -     51
UN22024        --> AATTAGTTATCATCCTTTTTATTTCATTAAGAAAAAGAAAAAGAAAAACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV538620       <-- ..................................................
FD541751       <-- ..................................................
EY906271       <-- ..................................................
EV552064       <-- ..................................................
EX771281       <-- ..................................................
EV568376       <-- ..................................................
EV568687       <-- ..................................................
EV567431       <-- ..................................................
EX757091       <-- ..................................................
EY906189       <-- ..................................................
EV547814       <-- ..................................................
EY906055       <-- ..................................................
EY908557       <-- ..................................................
EY906825       <-- ..................................................
EX760756       --> AATTAGTTATCATCCTTTTTATTTCATTAAGAAAAAGAAAAAGAAAAACA
EY902340       --> ..................................................
EW720178       --> ..................................................
EY902433       --> ..................................................
EY904231       --> ..................................................
EY902489       --> ..................................................

               51     -    101
UN22024        --> AAGCTAAAAGTAACAAAGATTGAAAGGGATTCAACAAATACATTTTTGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV538620       <-- ...............................................GAA
FD541751       <-- ..................................................
EY906271       <-- ..................................................
EV552064       <-- ..................................................
EX771281       <-- ..................................................
EV568376       <-- ..................................................
EV568687       <-- ..................................................
EV567431       <-- ..................................................
EX757091       <-- ..................................................
EY906189       <-- ..................................................
EV547814       <-- ..................................................
EY906055       <-- ..................................................
EY908557       <-- ..................................................
EY906825       <-- ..................................................
EX760756       --> AAGCTAAAAGTAACAAAGATTGAAAGGGATTCAACAAATACATTTTTGAA
EY902340       --> .....AAAAGTAACAAAGATTGAAAGGGATTCAACAAATACATTTTTGAA
EW720178       --> ...............................................GAA
EY902433       --> ...............................................GAA
EY904231       --> ...............................................GAA
EY902489       --> ...............................................ggA

               101    -    151
UN22024        --> CTAAATAGTTCCAAATTTATTTCTCAATCAAAATAAATCCCAACAAACCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV538620       <-- CTAAATAGTTCCAAATTTATTTCTCAATCAAAATAA-TCCCAACAAACCA
FD541751       <-- ..................................................
EY906271       <-- ..................................................
EV552064       <-- ..................................................
EX771281       <-- ..................................................
EV568376       <-- ..................................................
EV568687       <-- ..................................................
EV567431       <-- ..................................................
EX757091       <-- ..................................................
EY906189       <-- ..................................................
EV547814       <-- ..................................................
EY906055       <-- ..................................................
EY908557       <-- ..................................................
EY906825       <-- ..................................................
EX760756       --> CTAAATAGTTCCAAATTTATTTCTCAATCAAAATAAATCCCAACAAACCA
EY902340       --> CTAAATAGTTCCAAATTTATTTCTCAATCAAAATAAATCCCAACAAACCA
EW720178       --> CTAAATAGTTCCAAATTTATTTCTCAATCAAAATAAATCCCAACAAACCA
EY902433       --> CTAAATAGTTCCAAATTTATTTCTCAATCAAAATAAATCCCAACAAACCA
EY904231       --> CTAAATAGTTCCAAATTTATTTCTCAATCAAAATAA-TCCCAACAAACCA
EY902489       --> CTAAATAGTTCCAAATTTATTTCTCAATCAAAATAA-TCCCAACAAACCA

               151    -    201
UN22024        --> ATAAGTAAAACAGATATAGTGAGAAATGACATAAAGCCACTCAAAACTCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV538620       <-- ATAAGTAAAACAGATATAGTGAGAAATGACATAAAGCCACTCAAAACTCA
FD541751       <-- ..................................................
EY906271       <-- ..................................................
EV552064       <-- ..................................................
EX771281       <-- ..................................................
EV568376       <-- ..................................................
EV568687       <-- ..................................................
EV567431       <-- ..................................................
EX757091       <-- ..................................................
EY906189       <-- ..................................................
EV547814       <-- ..................................................
EY906055       <-- ..................................................
EY908557       <-- ..................................................
EY906825       <-- ..................................................
EX760756       --> ATAAGTAAAACAGATATAGTGAGAAATGACATAAAGCCACTCAAAACTCA
EY902340       --> ATAAGTAAAACAGATATAGTGAGAAATGACATAAAGCCACTCAAAACTCA
EW720178       --> ATAAGTAAAACAGATATAGTGAGAAATGACATAAAGCCACTCAAAACTCA
EY902433       --> ATAAGTAAAACAGATATAGTGAGAAATGACATAAAGCCACTCAAAACTCA
EY904231       --> ATAAGTAAAACAGATATAGTGAGAAATGACATAAAGCCACTCAAAATTCA
EY902489       --> ATAAGTAAAACAGATATAGTGAGAAATGACATAAAGCCACTCAAAACTCA

               201    -    251
UN22024        --> AGACAGAACACACTAAACAACACACAAACACAAGTCAGAACGTAGAAGCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV538620       <-- AGACAGAACACACTAAACAACACACAAACACAAGTCAGAACGTAGAAGCA
FD541751       <-- ..................................................
EY906271       <-- ..................................................
EV552064       <-- ..................................................
EX771281       <-- ..................................................
EV568376       <-- ..................................................
EV568687       <-- ..................................................
EV567431       <-- ..................................................
EX757091       <-- ..................................................
EY906189       <-- ..................................................
EV547814       <-- ..................................................
EY906055       <-- ..................................................
EY908557       <-- ..................................................
EY906825       <-- ..................................................
EX760756       --> AGACAGAACACACTAAACAACACACAAACACAAGTCAGAACGTAGAAGCA
EY902340       --> AGACAGAACACACTAAACAACACACAAACACAAGTCAGGACGTAGAAGCA
EW720178       --> AGACAGAACACACTAAACAACACACAAACACAAGTCAGAACGTAGAAGCA
EY902433       --> AGACAGAACACACTAAACAACACACAAACACAAGTCAGAACGTAGAAGCA
EY904231       --> AGACAGAACACACTAAACAACACACAAACACAAGTCAAAACGTAAAAGCA
EY902489       --> AGACAGAACACACTAAACAACACACAAACACAAGTCAGAACGTAGAAGCA

               251    -    301
UN22024        --> GTTCTGTTCCTTTCTTTTTTTGCTTTCATATGTTGCTGACGAAGGAAAGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV538620       <-- GTTCTGTTCCTTTCTTTTTT-GCTTTCATATGTTGCTGACGAAGGAAAGT
FD541751       <-- ..................................................
EY906271       <-- ..................................................
EV552064       <-- ..................................................
EX771281       <-- ..................................................
EV568376       <-- ..................................................
EV568687       <-- ..................................................
EV567431       <-- ..................................................
EX757091       <-- ..................................................
EY906189       <-- ..................................................
EV547814       <-- ..................................................
EY906055       <-- ..................................................
EY908557       <-- ..................................................
EY906825       <-- ..................................................
EX760756       --> GTTCTGTTCCTTTCTTTTTTTGCTTTCATATGTTGCTGACGAAGGAAAGT
EY902340       --> GTTCTGTTCCTTTCTTTTTTTGCTTTCATATGTTGCTGACGAAGGAAAGT
EW720178       --> GTTCTGTTCCTTTCTTTTTTTGCTTTCATATGTTGCTGACGAAGGAAAGT
EY902433       --> GTTCTGTTCCTTTCTTTTTTTGCTTTCATATGTTGCTGACGAAGGAAAGT
EY904231       --> GTTCTGTTCCTTTCTTTTTTTGCTTTCATATGTTGCTGACGAAGGAAAGT
EY902489       --> GTTCTGTTCCTTTCTTTTTTTGCTTTCATATGTTGCTGACGAAGGAAAGT

               301    -    351
UN22024        --> CCTTCCTTGGACAACACCTCAACGCTCTCAACAGAAGGCTGTTCTCTCGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV538620       <-- CCTTCCTTGGACAACACCTCAACGCTCTCAACAGAAGGCTGTCCTCTCGC
FD541751       <-- ..................................................
EY906271       <-- ..................................................
EV552064       <-- ..................................................
EX771281       <-- ..................................................
EV568376       <-- ..................................................
EV568687       <-- ..................................................
EV567431       <-- ..................................................
EX757091       <-- ..................................................
EY906189       <-- ..................................................
EV547814       <-- ..................................................
EY906055       <-- ..................................................
EY908557       <-- ..................................................
EY906825       <-- ..................................................
EX760756       --> CCTTCCTTGGACAACACCTCAACGCTCTCAACAGAAGGCTGTTCTCTCGC
EY902340       --> CCTTCCTTGGACAACACCTCAACGCTCTCAACAGAAGGCTGTTCTCTCGC
EW720178       --> CCTTCCTTGGACAACACCTCAACGCTCTCAACAGAAGGCTGTTCCCTCGC
EY902433       --> CCTTCCTTGGACAACACCTCAACGCTCTCAACAGAAGGCTGTTCTCTCGC
EY904231       --> CCTTCCTTGGACAACACCTCAACGCTCTCAACAAAAGGCTGTTCTCTCGC
EY902489       --> CCTTCCTTGGACAACACCTCAACGCTCTAAACAGAAGGCTGTTCTCTCGC

               351    -    401
UN22024        --> AGCCTTAGCAATCGCCTTGTTCTCATCAGGACTCCCTCCTTCTAGAAACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV538620       <-- AGCCTTAGCAATTGCCTTGTTCTCATCAGGACTCCCTCCTTCTAAGAAAA
FD541751       <-- ..................................................
EY906271       <-- ..................................................
EV552064       <-- ..................................................
EX771281       <-- ..................................................
EV568376       <-- ..................................................
EV568687       <-- ..................................................
EV567431       <-- ..................................................
EX757091       <-- ..................................................
EY906189       <-- ..................................................
EV547814       <-- ..................................................
EY906055       <-- ..................................................
EY908557       <-- ..................................................
EY906825       <-- ..................................................
EX760756       --> AGCCTTAGCAATCGCCTTGTTCTCATCAGGACTCCCTCCTTCTAGAAACA
EY902340       --> AGCCTTAGCAATCGCCTTGTTCTCATCAGGACTCCCTCCTTCTAGAAACA
EW720178       --> AGCCTTAGCAATCGCCTTGTTCTCATCAGGACTCCCTCCTTCTAGAAACA
EY902433       --> AGCCTTAGCAATCGCCTTGTTCTCATCAGGACTCCCTCCTTCTAGAAACA
EY904231       --> AGCCTTAGCAATCGCCTTGTTCTCATCAGGACTCCCTCCTTCTAAAAAAA
EY902489       --> AGCCTTAGCAATCGCCTTGTTCTCATCAGGACTCCCTCCTTCTAAGAAAA

               401    -    451
UN22024        --> CTCCTATCAACTTCCCTTCTTTGATCCAGTAGCTCCCGAACTTCGGTTTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV538620       <-- CTCCTATCAACTTCCCTTCTTTGATCCAGTAGCTCCCGAACTTCGGTTTA
FD541751       <-- ..................................................
EY906271       <-- ..................................................
EV552064       <-- ..................................................
EX771281       <-- ..................................................
EV568376       <-- ..................................................
EV568687       <-- ..................................................
EV567431       <-- ..................................................
EX757091       <-- ..................................................
EY906189       <-- ..................................................
EV547814       <-- ..................................................
EY906055       <-- ..................................................
EY908557       <-- ..................................................
EY906825       <-- ..................................................
EX760756       --> CTCCTATCAACTTCCCTTCTTTAACCCAGTAGCTCCCAAACTTCGGCTTA
EY902340       --> CTCCTATCAACTTCCCTTCTTTAACCCAGTAGCTCCCAAACTTCGGCTTA
EW720178       --> CTCCTATCAACTTCCCTTCTTTGATCCAGTAGCTCCCGAACTTCGGTTTA
EY902433       --> CTCCTATCAACTTCCCTTCTTTAACCCAGTAGCTCCCAAACTTCGGCTTA
EY904231       --> CTCCTATCAACTTCCCTTCTTTGATCCAGTAGCTCCCGAACTTCGGTTTA
EY902489       --> CTCCTATCAACTTCCCTTCTTTGATCCAGTAGCTCCCGAACTTCGGTTTA

               451    -    501
UN22024        --> GCAGATGTCGGGTCATTGTCACCAAACAACACGGTCTCTCCAACGTTATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV538620       <-- GCAGATGTCGGGTCATTGTCACCAAACAACACGGTCTCTCCAACGTTATC
FD541751       <-- ..................................................
EY906271       <-- ..................................................
EV552064       <-- ..................................................
EX771281       <-- ..................................................
EV568376       <-- ..................................................
EV568687       <-- ..................................................
EV567431       <-- ..................................................
EX757091       <-- ..................................................
EY906189       <-- ..................................................
EV547814       <-- ..................................................
EY906055       <-- ..................................................
EY908557       <-- ..................................................
EY906825       <-- ..................................................
EX760756       --> GCAGATGTCGGGTCATTGTCACCAAACAACACTGTCTCTCCAACGTTATC
EY902340       --> GCAGATGTCGGGTCATTGTCACCAAACAACACTGTCTCTCCAACGTTATC
EW720178       --> GCAGATGCCGGGTCATTGTCACCAAACAACACGGTCTCTCCAACGTTATC
EY902433       --> GCAGATGTCGGGTCATTGTCACCAAACAACACTGTCTCCCCAACGTTATC
EY904231       --> GCAGATGTCGGGTCATTGTCACCAAACAACACGGTCTCTCCAACGTTATC
EY902489       --> GCAGATGTCGGGTCATTGTCACCAAACAACACGGTCTCTCCAACGTTATC

               501    -    551
UN22024        --> ACCGTAGAACTGCCACGAGAGATTAAAGGCTCGAGAGTAGAAGTACGGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV538620       <-- ACCGTAGAACTGCCACGAGAGATTAAAGGCTCGAGAc.............
FD541751       <-- ..................................................
EY906271       <-- ..................................................
EV552064       <-- ..................................................
EX771281       <-- ..................................................
EV568376       <-- ..................................................
EV568687       <-- ..................................................
EV567431       <-- ..................................................
EX757091       <-- ..................................................
EY906189       <-- ..................................................
EV547814       <-- ..................................................
EY906055       <-- ..................................................
EY908557       <-- ..................................................
EY906825       <-- ..................................................
EX760756       --> ACCGTAGAACTGCCACGAGAGATTGAAAGCTCTAGAGTAGAAGTACGGAA
EY902340       --> ACCGTAGAACTGCCACGAGAGATTGAAAGCTCTAGAGTAGAGGTACGGAA
EW720178       --> ACCGTAGAACTGCCACGAGAGATTAAAGGCTCGAGAGTAGAAGTACGGAA
EY902433       --> ACCGTAGAACTGCCACGAGAGATTGAAAGCTCTAGAGTAGAAGTACGGAA
EY904231       --> ACCGTAAAACTGCCACGAAAGATTAAAGGCTCGAGAGTAAAAGTACGGAA
EY902489       --> ACCGTAGAACTGCCACGAGAGATTAAAGGCTCGAGAGTAGAAGTACGGAA

               551    -    601
UN22024        --> GGTAGTCATATTCGGGAATCGAGTTCCCTTCCTCTGCAGCCTTGATCGCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV538620       <-- ..................................................
FD541751       <-- ..................................................
EY906271       <-- ..................................................
EV552064       <-- ..................................................
EX771281       <-- ..................................................
EV568376       <-- ..................................................
EV568687       <-- ..................................................
EV567431       <-- ..................................................
EX757091       <-- ..................................................
EY906189       <-- ..................................................
EV547814       <-- ..................................................
EY906055       <-- ..................................................
EY908557       <-- ..................................................
EY906825       <-- ..................................................
EX760756       --> GATAGTCATATTCGGGAATCGAGTTCCCTTCCTCCGCAGCCTTGATCGCC
EY902340       --> GATAGTCATATTCGGGAATCGAGTTCCCTTACTCCGCAGCCTTGATCGCC
EW720178       --> GGTAGTCATATTCGGGAATCGAGTTCCCTTCCTCTGCAGCCTTGATCGCC
EY902433       --> GATAGTCATATTCGGGAATCGAGTTCCCTTCCTCCGCAGCCTTGATCGCC
EY904231       --> GGTAGTCATATTCGGGAATCGAGTTCCCTTCCTCTGCAGCCTTGATCGCC
EY902489       --> GGTAGTCATATTCGGGAATCGAGTTCCCTTCCTCTGCAGCCTTGATCGCC

               601    -    651
UN22024        --> TTAACGGCTTGTTCAGCTGACTTGCGAGCATGGTCCACGTGTTCGACGCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV538620       <-- ..................................................
FD541751       <-- ..................................................
EY906271       <-- ..................................................
EV552064       <-- ..................................................
EX771281       <-- ..................................................
EV568376       <-- ..................................................
EV568687       <-- ..................................................
EV567431       <-- ..................................................
EX757091       <-- ..................................................
EY906189       <-- ..................................................
EV547814       <-- ..................................................
EY906055       <-- ..................................................
EY908557       <-- ..................................................
EY906825       <-- ..................................................
EX760756       --> TTAACGGCTTGTTCAGCAGACTTGCGAGCATGGTCCACGTGTTCGACGCG
EY902340       --> TTAACGGCTTGTTCAGCAGACTTGCGAGCATGGTCCACGTGTTCGACGCG
EW720178       --> TTAACGGCCTGTTCAGCTGACTTGCGAGCATGGTCCACGTGTTCAACGCG
EY902433       --> TTAACGGCTTGTTCAGCAGACTTGCAAGCATGGTCCACGTGTTCGACGCG
EY904231       --> TTAACGGCCTGTTCAGCTGACTTGCGGGCATGGTCCACGTGTTCAACACG
EY902489       --> TTAACGGCCTGTTCAGCTGACTTGCGAGCATGGTCCACGTGTTCAACACG

               651    -    701
UN22024        --> TCTCATATCGTTGTAGAGTTTCATCGGGAAGGTGGCTATGTCACCAACGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV538620       <-- ..................................................
FD541751       <-- ..................................................
EY906271       <-- ..................................................
EV552064       <-- ..................................................
EX771281       <-- ..................................................
EV568376       <-- ..................................................
EV568687       <-- ..................................................
EV567431       <-- ..................................................
EX757091       <-- ..................................................
EY906189       <-- ..................................................
EV547814       <-- ..................................................
EY906055       <-- ..................................................
EY908557       <-- ..................................................
EY906825       <-- ..................................................
EX760756       --> TCTCATATCGTTGTAGAGTTTCATCGGGAAGGTGGTTATGTCACCAACGG
EY902340       --> TCTCATATCGTTGTAGAGTTTCATCGGGAAGGTGGCTATGTCACCAACGG
EW720178       --> TCTCATATCGTTGTAGAGTTTCATCGGGAAGGTGGCTATGTCACCAACGG
EY902433       --> TCTCATATCGTTGTAGAGTTTCATCGGGAAGGTGGCTATGTCACCAACGG
EY904231       --> TCTCATATCGTTGTAGAGTTTCATCGGGAAGGTGGCTATGTCACCAACGG
EY902489       --> TCTCATATCGTTGTAGAGTTTCATCGGGAAGGTGGCTATGTCACCAACGG

               701    -    751
UN22024        --> CGTATACATCTGGAACGCTTGTTCTGAAGAATGCATCAGTCTTGAGTCCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV538620       <-- ..................................................
FD541751       <-- ..................................................
EY906271       <-- ..................................................
EV552064       <-- ..................................................
EX771281       <-- ..................................................
EV568376       <-- ..................................................
EV568687       <-- ..................................................
EV567431       <-- ..................................................
EX757091       <-- ..................................................
EY906189       <-- ..................................................
EV547814       <-- ..................................................
EY906055       <-- ..................................................
EY908557       <-- ..................................................
EY906825       <-- ..................................................
EX760756       --> CGTATACATCTGGAACGCTTGTTCTGAAGAATGCATCAGTCTTGAGTCCA
EY902340       --> CGTATACATCTGGAACGCTTGTTCTGAAGAATGCATCAGTCTTGAGTCCA
EW720178       --> CGTATACATCTGGAACGCTTGTTCTGAAGAATGCATCAGTCTTGAGTCCA
EY902433       --> CGTATACATCTGGAACGCTTGTTCTGAAGAATGCATCAGTCTTGGGTCCA
EY904231       --> CGTATACATCTGGAACGCTCGTTCTGAAGAATGCATCAGTCTTGAGTCCA
EY902489       --> CGTATACATCTGGAACGCTCGTTCTGAAGAATGCATCAGTCTTGAGTCCA

               751    -    801
UN22024        --> CCCTTCTCTTCTTCAACTTGGCCTTTGAAGAGTGATGTAATAGGTCTAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV538620       <-- ..................................................
FD541751       <-- ..........................GAAGAGTGATGTAATAGGTCTAGC
EY906271       <-- .............................GAGTGATGTAATAG-TCTAGC
EV552064       <-- ..................................................
EX771281       <-- ..................................................
EV568376       <-- ..................................................
EV568687       <-- ..................................................
EV567431       <-- ..................................................
EX757091       <-- ..................................................
EY906189       <-- ..................................................
EV547814       <-- ..................................................
EY906055       <-- ..................................................
EY908557       <-- ..................................................
EY906825       <-- ..................................................
EX760756       --> CCCTTCTCTTCTTCAACTTGGCCTTTGAAGAGTGATGTAATAG-TCTAGC
EY902340       --> CCCTTCTCTTCTTCAACTTGGCCTTTGAAGAGTGATGTA...........
EW720178       --> CCCTTGTCTTCTTCAACTTGACCTTTGAAGAGTGATGTAATAGGTCTAGC
EY902433       --> CCCTTCTCTTCTTCA-CTTGGCCTTTGAAGAGTGATGTA...........
EY904231       --> CCCTTCTCTTCTTCAACTTGGCCTTTGAAGA...................
EY902489       --> CCCTTCTCTTCTTCAACTTGGCCTTTGAAGAGTGATGTAATAGGTCTAGC

               801    -    851
UN22024        --> ACCAACACCTACGATCACTATATCAGCTTCTAGTTTTCTTCCGTCCTTCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV538620       <-- ..................................................
FD541751       <-- ACCAACACTTACGATCACTATATCAGCTTCTAGTTTTCTTCCGTCCTTCA
EY906271       <-- ACCAACAC-TACGATCACTATATCAGCT-CTAGTTT-CTTCCGTC-TTCA
EV552064       <-- ...................ATATCAGCT-CTAGTTTTCT-CCGTC-TTCA
EX771281       <-- .................................................A
EV568376       <-- ..................................................
EV568687       <-- ..................................................
EV567431       <-- ..................................................
EX757091       <-- ..................................................
EY906189       <-- ..................................................
EV547814       <-- ..................................................
EY906055       <-- ..................................................
EY908557       <-- ..................................................
EY906825       <-- ..................................................
EX760756       --> ACCAACACCTACGATCACTATATCAGCTTCTAGTTTTCTTCCGTCCTTCA
EY902340       --> ..................................................
EW720178       --> ACCAACACCTACGATCACTATATCAGCTTCTAGTTTTCTTCCGTCCTTCA
EY902433       --> ..................................................
EY904231       --> ..................................................
EY902489       --> ACCAACACCTACGATCACTATATCAGCTTCTAGTTTT.............

               851    -    901
UN22024        --> ATAACACCTCAGTGACCTCTCCAGCAGAGTTAGTGGTGAAACCGGCAGCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV538620       <-- ..................................................
FD541751       <-- ATAACACCTCAGTGACCTCTCCAGCAGAGTTAGTGGTGAAACCGGCTGCA
EY906271       <-- ACAACAC-TCAGTGACCTCTCCAGCAGAGTTAGTGGTGAA-CCGGCAGCA
EV552064       <-- ATAACAC-TCAGTGACCTCTCCAGCAGAGTTAGTGGTGAAACCGGCAGCA
EX771281       <-- ATAACAC-TCAGTGACCTCTCCAGCAGAGTTAGTGGTGAAACCGGCAGCA
EV568376       <-- ......................AGCAGAGTTAGTGGTGAAACCGGCAGCA
EV568687       <-- ......................AGCAGAGTTAGTGGTGAAACCGGCAGCA
EV567431       <-- ..................................................
EX757091       <-- ..................................................
EY906189       <-- ..................................................
EV547814       <-- ..................................................
EY906055       <-- ..................................................
EY908557       <-- ..................................................
EY906825       <-- ..................................................
EX760756       --> -T-ACACCTCAGTGACtctcagca..........................
EY902340       --> ..................................................
EW720178       --> ATATCACCTCAGTGACCTCTCCAGCAGAGTTAGTGGTGAAACCGGCAGCA
EY902433       --> ..................................................
EY904231       --> ..................................................
EY902489       --> ..................................................

               901    -    951
UN22024        --> ACGGTGCCTTT-GACAATGTTGATCCCTTTGTTGGCGTAGTAACCCTCAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV538620       <-- ..................................................
FD541751       <-- ACGATGCCTTT-GACAATGTTGATCCCTTTGTTGGCGTAGTAACCCTCGT
EY906271       <-- ACGGTGC-TTT-AACAATGTTGATCCCTTTGTTGGCGTAGTAACCCTCAT
EV552064       <-- ACGGTGCCTTT-GACAATGTTGATCCCTTTGTTGGCGTAGTAACCCTCAT
EX771281       <-- ACGGTGC-TTT-GACAATGTTGATCCCTTTGTTGGCGTAGTAACCCTCAT
EV568376       <-- ACGGTGCCTTT-GACAATGTTGATCCCTTTGTTGGCGTAGTAACCCTCAT
EV568687       <-- ACGGTGCCTTTTGACAATGTTGATCCCTTTGTTGGCGTAGTAACCCTCAT
EV567431       <-- ........TTT-GACAATGTTGATCCCTTTGTTGGCGTAGTAACCCTCAT
EX757091       <-- ............GACAATGT-GATCCCTTTGTTGGCGTAGTA-CCCTCGT
EY906189       <-- ............GACAATGT-GATCCCTTTGT-GGCGTAGTA-CCCTCGT
EV547814       <-- ..............................GTTGGCGTAGTAACCCTCAT
EY906055       <-- .........................................tACCCTCGT
EY908557       <-- ..................................................
EY906825       <-- ..................................................
EX760756       --> ..................................................
EY902340       --> ..................................................
EW720178       --> ACGGTGCCTTT-AACAATGTTGATCCCTTTGTTGGCGTAGTAACCCTCAT
EY902433       --> ..................................................
EY904231       --> ..................................................
EY902489       --> ..................................................

               951    -   1001
UN22024        --> AGAAGGAAGCAATGTCAGCGGTGAAAAGCCGAGG-CATGCACCAAGGCTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV538620       <-- ..................................................
FD541751       <-- AGAAGGAAGCAATGTCAGCGGTGAAAAGCCGAGG-CATGCACCAAGGCTC
EY906271       <-- AGAAGGAAGCAATGTCAGCGGTGAAAAACCGAGG-CATGCACCAAGGCTC
EV552064       <-- AGAAGGAAGCAATGTCAGCGGTGAAAAGCCGAGG-CATGCACCAAGGCTC
EX771281       <-- AGAAGGAAGCAATGTCAGCGGTGAAAAGCCGAGG-CATGCACCAAGGCTC
EV568376       <-- AGAAGGAAGCAATGTCAGCGGTGAAAAGCCGAGG-CATGCACCAAGGCTC
EV568687       <-- AGAAGGAAGCAATGTCAGCGGTGAAAAGCCGAGG-CATGCACCAAGGCTC
EV567431       <-- AGAAGGAAGCAATGTCAGCGGTGAAAAGCCGAGGGCATGCACCAAGGCTC
EX757091       <-- AGAAGGA-GCAATGTCAGCGGTGAAAAGCCGAGG-CATGCACCAAGGCTC
EY906189       <-- AGAAGGAAGCAATGTCAGCAGTGAAAAGCCGAGG-CATGCACCAAGGCTC
EV547814       <-- AGAAGGAAGCAATGTCAGCGGTGAAAAGCCGAGG-CATGCACCAAGGCTC
EY906055       <-- AGAAGGAAGCAATGTCAGCGGTGAAAAGCCGAGG-CATGCACCAAGGCTC
EY908557       <-- ............TGTCAGCGGTGAAAAGCCGAGG-CATGCACCAAGGCTC
EY906825       <-- ..................................................
EX760756       --> ..................................................
EY902340       --> ..................................................
EW720178       --> AGAAG-AAGCAATGTC..................................
EY902433       --> ..................................................
EY904231       --> ..................................................
EY902489       --> ..................................................

               1001   -   1051
UN22024        --> TGGATAAACCATGGTAACTTCCATGTTGTTAACCTTGAGAGCAGAACTGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV538620       <-- ..................................................
FD541751       <-- TGGATAAACCATGGTAACTTCCATGTTGTTAACCTTGAGAGCAGAACTGA
EY906271       <-- TGGATAAACCATGGTAACTTCCATGTTGTTAACCTTGAGAGCAGAACTGA
EV552064       <-- TGGATAAACCATGGTAACTTCCATGTTGTTAACCTTGAGAGCAGAACTGA
EX771281       <-- TGGATAAACCATGGTAACTTCCATGTTGTTAACCTTGAGAGCAGAACTGA
EV568376       <-- TGGATAAACCATGGTAACTTCCATGTTGTTAACCTTGAGAGCAGAACTGA
EV568687       <-- TGGATAAACCATGGTAACTTCCATGTTGTTAACCTTGAGAGCAGAACTGA
EV567431       <-- TGGATAAACCATGGTAACTTCCATGTTGTTAACCTTGAGAGCAGAACTGA
EX757091       <-- TGGATAAACCATGGTAACTTCCATGTTGT-AACCTTGAGAGCAGAACTGA
EY906189       <-- TGGATAAACCATGGTAACTTCCATGTTGTTAACCTTGAGAGCAGAACTGA
EV547814       <-- TGGATAAACCATGGTAACTTCCATGTTGTTAACCTTGAGAGCAGAACTGA
EY906055       <-- TGGATAAACCATGGTAACTTCCATGTTGTTAACCTTGAGAGCAGAACTGA
EY908557       <-- TGGATAAACCATGGTAACTTCCATGTTGTTAACCTTGAGAGCAGAACTGA
EY906825       <-- ..................................................
EX760756       --> ..................................................
EY902340       --> ..................................................
EW720178       --> ..................................................
EY902433       --> ..................................................
EY904231       --> ..................................................
EY902489       --> ..................................................

               1051   -   1101
UN22024        --> GTTCAAGACCGATGTAACCGCCACCAACAACCACAGCTTTGCCATTTTCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV538620       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD541751       <-- GTTCAAGACCAATGTAACCGCCACCAACAACCACAGCTTTGCCATTTTCC  Raphanus raphanistrum subsp. raphanistrum (MS)
EY906271       <-- GTTCAAGACCAATGTAACCGCCACCAACAACCACAGCTTTGCCATTTTCC  Raphanus raphanistrum subsp. raphanistrum (MS)
EV552064       <-- GTTCAAGACCGATGTAACCGCCACCAACAACCACAGCTTTGCCATTTTCC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX771281       <-- GTTCAAGACCGATGTAACCGCCACCAACAACCACAGCTTTGCCATTTTCC  Raphanus raphanistrum subsp. landra
EV568376       <-- GTTCAAGACCGATGTAACCGCCACCAACAACCACAGCTTTGCCATTTTCC  Raphanus raphanistrum subsp. landra
EV568687       <-- GTTCAAGACCGATGTAACCGCCACCAACAACCACAGCTTTGCCATTTTCC  Raphanus raphanistrum subsp. landra
EV567431       <-- GTTCAAGACCGATGTAACCGCCACCAACAACCACAGCTTTGCCATTTTCC  Raphanus raphanistrum subsp. landra
EX757091       <-- GTTCAAGACCAATGTAACCGCCACCAACAACCACAGCTTTGCCATTTTCC  Raphanus raphanistrum subsp. raphanistrum (MS)
EY906189       <-- GTTCAAGACCAATGTAACCGCCACCAACAACCACAGCTTTGCCATTTTCC  Raphanus raphanistrum subsp. raphanistrum (MS)
EV547814       <-- GTTCAAGACCGATGTAACCGCCACCAACAACCACAGCTTTGCCATTTTCC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY906055       <-- GTTCAAGACCAATGTAACCGCCACCAACAACCACAGCTTTGCCATTTTCC  Raphanus raphanistrum subsp. raphanistrum (MS)
EY908557       <-- GTTCGAGACCAATGTAACCGCCACCAACAACCACAGCTTTGCCATTTTCC  Raphanus raphanistrum subsp. raphanistrum (MS)
EY906825       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX760756       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY902340       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EW720178       --> ..................................................  Raphanus sativus var. oleiformis
EY902433       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY904231       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY902489       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)

               1101   -   1151
UN22024        --> TTTTCGAGCATTGCAGTCAGAAGCTCATCAGCATCTACAAGCTCTCTTAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV538620       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD541751       <-- TTTTCGAGCATTGCAGTCAGAAGCTAATCAGCGTCTACAAGCTCTCTTAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY906271       <-- TTTTCGAGCATTGCAGTCAGAAGCTCATCAGCATCTACAAGCTCTCTTAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EV552064       <-- TTTTCGAGCATTGCGGTCAGAAGCTCATCAGCATCTACAAGCTCTCTTAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX771281       <-- TTTTCGAGCATTGCGGTCAGAAGCTCATCAGCATCTACAAGCTCTCTTAG  Raphanus raphanistrum subsp. landra
EV568376       <-- TTTTCGAGCATTGCAGTCAGAAGCTCATCAGCATCTACAAGCTCTCTTAG  Raphanus raphanistrum subsp. landra
EV568687       <-- TTTTCGAGCATTGCAGTCAGAAGCTCATCAGCATCTACAAGCTCTCTTAG  Raphanus raphanistrum subsp. landra
EV567431       <-- TTTTCGAGCATTGCGGTCAGAAGCTCATCAGCATCTACAAGCTCTCTTAG  Raphanus raphanistrum subsp. landra
EX757091       <-- TTTTCGAGCATTGCAGTCAGAAGCTCATCAGCGTCTACAAGCTCTCTTAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY906189       <-- TTTTCGAGCATTGCAGTCAGAAGCTCATCAGCGTCTACAAGCTCTCTTAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EV547814       <-- TTTTCGAGCATTGCGGTCAGAAGCTCATAAGCATCTACAAGCTCTCTTAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY906055       <-- TTTTCGAGCATTGCAGTCAGAAGCTCATCAGCGTCTACAAGCTCTCTTAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY908557       <-- TTTTCGAGCATTGCAGTCAGAAGCTCATCAGCATCTACAAGCTCTCTTAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY906825       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX760756       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY902340       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EW720178       --> ..................................................  Raphanus sativus var. oleiformis
EY902433       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY904231       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY902489       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)

               1151   -   1201
UN22024        --> GTAGAATATATTCTTAGCATCTGCTCCTTCCACCCCAAAATCTGACAACC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV538620       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD541751       <-- GTAGAATATATTCTTAGCATCAGCTCCTTCCACCCCAAAATCTGACAACC  Raphanus raphanistrum subsp. raphanistrum (MS)
EY906271       <-- GTAGAATATATTCTTAGCATCTGCTCCTTCCACCCCAAAATCTGACAACC  Raphanus raphanistrum subsp. raphanistrum (MS)
EV552064       <-- GTAGAATATATTCTTAGCATCTGCTCCTTCCACCCCAAAATCTGACAGCC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX771281       <-- GTAGAATATATTCTTAGCATCTGCTCCTTCCACCCCAAAATTTGACAGCC  Raphanus raphanistrum subsp. landra
EV568376       <-- GTAGAATATATTCTTAGCATCTGCTCCTTCCACCCCAAAATCTGACAACC  Raphanus raphanistrum subsp. landra
EV568687       <-- GTAGAATATATTCTTAGCATCTGCTCCTTCCACCCCAAAATCTGACAACC  Raphanus raphanistrum subsp. landra
EV567431       <-- GTAGAATATATTCTTAGCATCTGCTCCTTCCACCCCAAAATCTGACAGCC  Raphanus raphanistrum subsp. landra
EX757091       <-- GTAGAATATATTCTTAGCATCAGCTCCTTCCACCCCAAAATCTGACAACC  Raphanus raphanistrum subsp. raphanistrum (MS)
EY906189       <-- GTAGAATATATTCTTAGCATCAGCTCCTTCCACCCCAAAATCTGACAACC  Raphanus raphanistrum subsp. raphanistrum (MS)
EV547814       <-- GTAGAATATATTCTTAGCATCTGCTCCTTCCACCCCAAAATCTGACAGCC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY906055       <-- GTAGAATATATTCTTAGCATCAGCTCCTTCCACCCCAAAATCTGACAACC  Raphanus raphanistrum subsp. raphanistrum (MS)
EY908557       <-- GTAGAATATATTCTTAGCATCTGCTCCTTCCACCCCAAAATCTGACAACC  Raphanus raphanistrum subsp. raphanistrum (MS)
EY906825       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX760756       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY902340       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EW720178       --> ..................................................  Raphanus sativus var. oleiformis
EY902433       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY904231       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY902489       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)

               1201   -   1251
UN22024        --> TTGTGACAGAAGAACCAGTAGCAGCGATCAAGGTTTGGTACTTGAAGACT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV538620       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD541751       <-- TTGTGACAGAAGAACCGGTAGCAGCAATCAAGGTTTGGTACTTGAAGACT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY906271       <-- TTGTGACAGAAGAACCAGTAGCAGCTATCAAGGTTTGGTACTTGAAGACT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV552064       <-- TTGTGACAGAAGAACCAGTAGCAGCGATCAAGGTTTGGTACTTGAAGACT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX771281       <-- TTGTGACAGAAGAACCAGTAGCAGCGATCAAGGTTTGGTACTTGAAGACT  Raphanus raphanistrum subsp. landra
EV568376       <-- TTGTGACAGAAGAACCAGTAGCAGCGATCAAGGTTTGGTACTTGAAGACT  Raphanus raphanistrum subsp. landra
EV568687       <-- TTGTGACAGAAGAACCAGTAGCAGCGATCAAGGTTTGGTACTTGAAGACT  Raphanus raphanistrum subsp. landra
EV567431       <-- TTGTGACAGAAGAACCAGTAGCAGCGATCAAGGTTTGGTACTTGAAGACT  Raphanus raphanistrum subsp. landra
EX757091       <-- TTGTGACAGAAGAACCGGTAGCAGCAATCAAGGTTTGGTACTTGAAGACT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY906189       <-- TTGTGACGGAAGAACCGGTAGCAGCAATCAAGGTTTGGTACTTGAAGACT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV547814       <-- TTGTGACAGAAGAACCAGTAGCAGCGATCAAGGTTTGGTACTTGAAGACT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY906055       <-- TTGTGACAGAAGAACCGGTAGCAGCAATCAAGGTTTGGTACTTGAAGACT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY908557       <-- TTGTGACAGAAGAACCAGTAGCAGCTATCAAGGTTTGGTACTTGAAGACT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY906825       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX760756       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY902340       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EW720178       --> ..................................................  Raphanus sativus var. oleiformis
EY902433       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY904231       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY902489       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)

               1251   -   1301
UN22024        --> TGTCCAGTGCCACTGACGAGAGTCTTTGAAGCAAGATCTGCTTTGACAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV538620       <-- ..................................................
FD541751       <-- TGTCCGGTGCCACTGACGAGAGTCTTTGAAGCAAGATCTGCTTTGACAAT
EY906271       <-- TGTCCAGTGCCACTGACGAGAGTCTTTGAAGCAAGATCTGCTTTGACAAT
EV552064       <-- TGTCCAGTGCCACTGACGAGAGTCTTTGAAGCAAGATCTGCTTTGACAAT
EX771281       <-- TGTCCAGTGCCACTGACGAGAGTCTTTGAAGCAAGATCTGCTTTGACAAT
EV568376       <-- TGTCCAGTGCCACTGACGAGAGTCTTTGAAGCAAGGTCTGCTTTGACAAT
EV568687       <-- TGTCCAGTGCCACTGACGAGAGTCTTTGAAGCAAGGTCTGCTTTGACAAT
EV567431       <-- TGTCCAGTGCCACTGACGAGAGTCTTTGAAGCAAGATCTGCTTTGACAAT
EX757091       <-- TGTCCGGTGTCACTGACGAGAGTCTTTGAAGCAAGATCTGCTTTGACAAT
EY906189       <-- TGTCCGGTGCCACTGACGAGAGTCTTTGAAGCAAGATCTGCTTTGACAAT
EV547814       <-- TGTCCAGTGCCACTGACGAGAGTCTTTGAAGCAAGATCTGCTTTGACAAT
EY906055       <-- TGTCCGGTGCCACTGACGAGAGTCTTTGAAGCAAGATCTGCTTTGACAAT
EY908557       <-- TGTCCAGTGCCACTGACGAGAGTCTTTGAAGCAAGATCTGCTTTGACAAT
EY906825       <-- ..............................GCAAGATCTGCTTTGACAAT
EX760756       --> ..................................................
EY902340       --> ..................................................
EW720178       --> ..................................................
EY902433       --> ..................................................
EY904231       --> ..................................................
EY902489       --> ..................................................

               1301   -   1351
UN22024        --> CTCTGTCTCCAGAAACAGATCAATCCCATTCTCTTTGTACCACGGAGGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV538620       <-- ..................................................
FD541751       <-- CTCTGTCTCCAGAAACAGATCAATCCCATTCTCTTTGTACCACGGCGGGA
EY906271       <-- CTCTGTCTCCAGAAACAGATCAATCCCATTCTCTTTGTACCAAGGAGGGA
EV552064       <-- CTCTGTCTCCAGAAACAGATCAATCCCATTCTCTTTGTACCACGGAGGGA
EX771281       <-- CTCTGTCTCCAGAAACAGATCAATCCCATTCTCTTTGTACCACGGAGGGA
EV568376       <-- CTCTGTCTCCAGAAACAGATCAATCCCATTCTCTTTGTACCACGGAGGGA
EV568687       <-- CTCTGTCTCCAGAAACAGATCAATCCCATTCTCTTTGTACCACGGAGGGA
EV567431       <-- CTCTGTCTCCAGAAACAGCTCAATCCCATTCTCTTTGTACCACGGAGGGA
EX757091       <-- CTCTGTCTCCAGAAACAGATCAATCCCATTCTCTTTGTACCACGGCGGGA
EY906189       <-- CTCTGTCTCCAGAAACAGATCAATCCCATTCTCTTTGTACCACGGCGGGA
EV547814       <-- CTCTGTCTCCAGAAACAGATCAATCCCATTCTCTTTGTACCACGGAGGGA
EY906055       <-- CTCTGTCTCCAGAAACAGATCAATCCCATTCTCTTTGTACCACGGCGGGA
EY908557       <-- CTCTGTCTCCAGAAACAGATCAATCCCATTCTCTTTGTACCAAGGAGGGA
EY906825       <-- CTCTGTCTCCAGAAACAGATCAATCCCATTCTCTTTGTACCAAGGAGGGA
EX760756       --> ..................................................
EY902340       --> ..................................................
EW720178       --> ..................................................
EY902433       --> ..................................................
EY904231       --> ..................................................
EY902489       --> ..................................................

               1351   -   1401
UN22024        --> ACTGTCTCTCTCCCCCACTTCCAGCACAGACATAGAAACCCGGAAGTGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV538620       <-- ..................................................
FD541751       <-- ACTGTCTCTCTCCCCCACTTCCAGCACAGACATAGAAACCCGGAAGTGAA
EY906271       <-- ACTGTCTCTCTCCCC-ACTTCCAGCACAGACATAGAAACCCGGAAGTGAA
EV552064       <-- ACTGTCTCTCTCCCCCACTTCCAGCACAGGCATAGAAACCCGGAAGTGAA
EX771281       <-- ACTGTCTCTCTCCCCCACTTCCAGCACAGACATAGAAACCCGGAAGTGAA
EV568376       <-- ACTGTCTCTCTCCCCCACTTCCAGCACAGACATAGAAACCCGGAAGTGAA
EV568687       <-- ACTGTCTCTCTCCCCCACTTCCAGCACAGACATAGAAACCCGGAAGTGAA
EV567431       <-- ACTGTCTCTCTCCCCCACTTCCAGCACAGACATAGAAACCCGGAAGTGAA
EX757091       <-- ACTGTCTCTCTCCCCCACTTCCAGCACAGACATAGAAACCCGGAAGTGAA
EY906189       <-- ACTGTCTCTCTCCCCCACTTCCAGCACAGACATAGAAACCCGGAAGTGAA
EV547814       <-- ACTGTCTCTCTCCCCCACTTCCAGCACAGACATAGAAACCCGGAAGTGAA
EY906055       <-- ACTGTCTCTCTCCCCCACTTCCAGCACAGACATAGAAACCCGGAAGTGAA
EY908557       <-- ACTGTCTCTCTCCCCCACTTCCAGCACAGACATAGAAACCCGGAAGTGAA
EY906825       <-- ACTGTCTCTCTCCCCCACTTCCAGCACAGACATAGAAACCCGGAAGTGAA
EX760756       --> ..................................................
EY902340       --> ..................................................
EW720178       --> ..................................................
EY902433       --> ..................................................
EY904231       --> ..................................................
EY902489       --> ..................................................

               1401   -   1451
UN22024        --> GCTTTATTCTGGAAATTAATATATCCTTTGCTGAGTGCAGGACGCTCATA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV538620       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD541751       <-- GCTTTATTCTGGAAATTAATATATCCTTTGCTGAGTGCAGGACGCTCATA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY906271       <-- GCTTTATTCTGGAAATTAATATATCCTTTGCTGAGTGCAGGACGCTCATA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV552064       <-- GCTTTATTCTGGAAATTAATATATCCTTTGCTGAGTGCAGGACGCTCATA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX771281       <-- GCTTTATTCTGGAAATTAATATATCCTTTGCTGAGTGCAGGTCGCTCATA  Raphanus raphanistrum subsp. landra
EV568376       <-- GCTTTATTCTGGAAATTAATATATCCTTTGCTGAGTGCAGGTCGCTCATA  Raphanus raphanistrum subsp. landra
EV568687       <-- GCTTTATTCTGGAAATTAATATATCCTTTGCTGAGTGCAGGTCGCTCATA  Raphanus raphanistrum subsp. landra
EV567431       <-- GCTTTATTCTGGAAATTAATATATCCTTTGCTGAGTGCAGGTCGCTCATA  Raphanus raphanistrum subsp. landra
EX757091       <-- GCTTTATTCTGGAAATTAATAAATCCTTTGCTGAGTGCAGGACGCTCATA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY906189       <-- GCTTTATTCTGGAAATTAATATATCCTTTGCTGAGTGCAGGACGCTCATA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV547814       <-- GCTTTATTCTGGAAATTAATATATCCTTTGCTGAGTGCAGGACGCTCATA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY906055       <-- GCTTTATTCTGGAAATTAATATATCCTTTGCTGAGTGCAGGACGCTCATA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY908557       <-- GCTTTATTCTGGAAATTAATATATCCTTTGCTGAGTGCAGGACGCTCATA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY906825       <-- GCTTTATTCTGGAAATTAATATATCCTTTGCTGAGTGCAGGACGCTCATA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX760756       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY902340       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EW720178       --> ..................................................  Raphanus sativus var. oleiformis
EY902433       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY904231       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY902489       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)

               1451   -   1501
UN22024        --> AGGAGGCACCGGTTCCCTGGAGATGATAGCAAGTTCACCAGGCTTGAGAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV538620       <-- ..................................................
FD541751       <-- AGGAGGCc..........................................
EY906271       <-- AGGAGGCACCGGTTCCTTGGAGATGATAGCAAGTTCACCAGGCTTGAGAC
EV552064       <-- AGGAGGCACCGGTTCCCTGGAGATGATAGCAAGTTCACCAGGCTTGAGAC
EX771281       <-- AGGAGGCACCGGTTCCCTGGAGATGATAGCAAGTTCACCAGGCTTGAGAC
EV568376       <-- AGGAGGCACCGGTTCCCTGGAGATGATAGCAAGTTCACCAGGCTTGAGAC
EV568687       <-- AGGAGGCACCGGTTCCCTGGAGATGATAGCAAGTTCACCAGGCTTGAGAC
EV567431       <-- AGGAGGCACCGGTTCCCTGGAGATGATAGCAAGTTCACCAGGCTTGAGAC
EX757091       <-- AGGAGGCACCGGTTCCCTGGAGATGATAGCAAGTTCACCAGGCTTGAGAC
EY906189       <-- AGGAGGCACCGGTTCCCTGGAGATGATAGCAAGTTCACCAGGCTTGAGAC
EV547814       <-- AGGAGGCACCGGTTCCCTGGAGATGATAGTAAGTTCACCAGGCTTGAGAC
EY906055       <-- AGGAGGCACCGGTTCCCTGGAGATGATAGCAAGTTCACCAGGCTTGAGAC
EY908557       <-- AGGAGGCACCGGTTCCTTGGAGATGATAGCAAGTTCACCAGGCTTGAGAC
EY906825       <-- AGGAGGCACCGGTTCCTTGGAGATGATAGCAAGTTCACCAGGCTTGAGAC
EX760756       --> ..................................................
EY902340       --> ..................................................
EW720178       --> ..................................................
EY902433       --> ..................................................
EY904231       --> ..................................................
EY902489       --> ..................................................

               1501   -   1551
UN22024        --> CTTGCTTAGAGAACTCTCTCGCCGCGTATCCGGCGGCGACGCCACCTCCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV538620       <-- ..................................................
FD541751       <-- ..................................................
EY906271       <-- CTTGCTTAGAGAACTCTCTCGCTGCGTATCCGGCGGCGACGCCACCTCCG
EV552064       <-- CTTGCTTAGAGAACTCTCTCGCCGCGTATCCGGCGGCGACGCCACCTCCG
EX771281       <-- CTTGCTTAGAGc......................................
EV568376       <-- CTTGCTTAGAGAACTCTCTAGCCGCGTATCCGGCGGCGACGCCACCTCCG
EV568687       <-- CTTGCTTAGAGAACTCTCTAGCCGCGTATCCGGCGGCGACGCCACCTCCG
EV567431       <-- CTTGCTTAGAGAACTCTCTCGCCGCGTATCCGGCGGCGACGCCACCTCCG
EX757091       <-- CTTGCTTAGAGAACTCTCTCGCCGCGTATCCGGCGGCGACGCCACCTCCG
EY906189       <-- CTTGCTTAGAGAACTCTCTCGCCGCGTATCCGGCGGCGACGCCACCTCCG
EV547814       <-- CTTGCTTAGAGAACTCTCTCGCCGCGTATCCGGCGGCGACGCCACCTCCG
EY906055       <-- CTTGCTTAGAGAACTCTCTCGCCGCGTATCCGGCGGCGACGCCACCTCCG
EY908557       <-- CTTGCTTAGAGAACTCTCTCGCTGCGTATCCGGCGGCGACGCCACCTCCG
EY906825       <-- CTTGCTTAGAGAACTCTCTCGCTGCGTATCCGGCGGCGACGCCACCTCCG
EX760756       --> ..................................................
EY902340       --> ..................................................
EW720178       --> ..................................................
EY902433       --> ..................................................
EY904231       --> ..................................................
EY902489       --> ..................................................

               1551   -   1601
UN22024        --> ACGATCACGTACTTGTAGCTCTTCTCTTCCGCCATTTTGATTGCTATCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV538620       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD541751       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY906271       <-- ACGATCACGTACTTGTAGCTCTTCTCTTCCGCCATTTTGATTGCTATCc.  Raphanus raphanistrum subsp. raphanistrum (MS)
EV552064       <-- AC-ATCACGTACTTGAAGCTCTTCTCTTCCGCCGTTTTGATTGCTATCAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX771281       <-- ..................................................  Raphanus raphanistrum subsp. landra
EV568376       <-- ACGATCACGTACCTGAAGCTCTTCTCTTCCACCATTTTGATTGCTATCAA  Raphanus raphanistrum subsp. landra
EV568687       <-- ACGATCACGTACCTGAAGCTCTTCTCTTCCACCATTTTGATTGCTATCAA  Raphanus raphanistrum subsp. landra
EV567431       <-- ACGATCACGTACTTGAAGCTCTTCTCTTCCGCCATTTTGATTGCTATCAA  Raphanus raphanistrum subsp. landra
EX757091       <-- ACGATCACGTACTTGTAGCTCTTCTCTTCCGCCATTTTGATTGCTATCAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY906189       <-- ACGATCACGTACTTGTAGCTCTTCTCTTCCGCCATTTTGATTGCTATCAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV547814       <-- ACGATCACGTACTTGAAGCTCTTCTCTTCCGCCATTTTGATTGCTATCAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY906055       <-- ACGATCACGTACTTGTAGCTCTTCTCTTCCGCCATTTTGATTGCTATCAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY908557       <-- ACGATCACGTACTTGTAGCTCTTCTCTTCCGCCATTTTGATTGCTATGAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY906825       <-- ACGATCACGTACTTGTAGCTCTTCTCTTCCGCCATTTTGATTGCTATGAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX760756       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY902340       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EW720178       --> ..................................................  Raphanus sativus var. oleiformis
EY902433       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY904231       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY902489       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)

               1601   -   1651
UN22024        --> ATCGTCCT-TTTTTTTTGTTACTTTCGTTTTTGTGGATCCGAGAAACGTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV538620       <-- ..................................................
FD541751       <-- ..................................................
EY906271       <-- ..................................................
EV552064       <-- ATCGTCCT-TTTTTTTTGTTACTTTCGTTTTTGTGGATCCGAGAAACGTC
EX771281       <-- ..................................................
EV568376       <-- ATCGTCCT-TTTTTTT-GTTACTTTCGTTTTTGTGGATCCGAGAAACGTC
EV568687       <-- ATCGTCCT-TTTTTTT-GTTACTTTCGTTTTTGTGGATCCGAGAAACGTC
EV567431       <-- ATCGTCCT-TTTTTTTTGTTACTTTCGTTTTTGTGGATCCGAGAAACGTC
EX757091       <-- ATCGTCCT-TTTTTTTTGTTACTTTCGTTTTTGTGGATCCGAGAAACGTC
EY906189       <-- ATCGTCCT-TTTTTTT-GTTACTTTCGTTTTTGTGGATCCGAGAAACGTC
EV547814       <-- ATCGTCCT-TTTTTTTTGTTACTTTCGTTTTTGTGGATCCGAGAAACGTC
EY906055       <-- ATCGTCCT-TTTTTTTTGTTACTTTCGTTTTTGTGGATCCGAGAAACGTC
EY908557       <-- ATCGTCCTCTTTTTTTTGTTACTTTTGTTTTTGTGGATCCGAGAAACGTC
EY906825       <-- ATCGTCCTCTTTTTTTTGTTACTTTTGTTTTTGTGGATCCGAGAAACGTC
EX760756       --> ..................................................
EY902340       --> ..................................................
EW720178       --> ..................................................
EY902433       --> ..................................................
EY904231       --> ..................................................
EY902489       --> ..................................................

               1651   -   1701
UN22024        --> C
                   ~
EV538620       <-- .
FD541751       <-- .
EY906271       <-- .
EV552064       <-- C
EX771281       <-- .
EV568376       <-- C
EV568687       <-- C
EV567431       <-- C
EX757091       <-- C
EY906189       <-- C
EV547814       <-- C
EY906055       <-- C
EY908557       <-- C
EY906825       <-- C
EX760756       --> .
EY902340       --> .
EW720178       --> .
EY902433       --> .
EY904231       --> .
EY902489       --> .