1 - 51
UN22029 --> AAATATTTTGAAACATAAATATAAGTCTTGAAAATTAAAACTGAACACAC
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD535653 <-- ..................................................
EX753696 --> AAATATTTTGAAACATAAATATAAGTCTTGAAAATTAAAACTGAACACAC
FD536848 --> .........GAAACATAAATATAAGTCTTGAAAATTAAAACTGAGCACAC
EV543551 --> ......................AAGTCTTGAAAATTAAAACTGAACACAC
EY909565 --> ..................................................
EX753346 --> ..................................................
51 - 101
UN22029 --> ATCAGAGCAAGTGTATTTGTTCTAAACAAGCACAAAAGAGATTCCGAAGT
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD535653 <-- ..................................................
EX753696 --> ATCAAAGCAAGTGTATTTGTTCTAAACAAGCACAAAAGAAATTCCGAAGT
FD536848 --> ATCAGAGCAAGTGTAGTTGTTCTAAACAAGCACAAAAGAGATTCCGAAGT
EV543551 --> ATCAGAGCAAGTGTATTTGTTCTAAACAAGCACAAAAGAGATTCCGAAGT
EY909565 --> ...AGAGCAAGTGTATTTGTTCTAAACAAGCACAAAAGAGATTCCGAAGT
EX753346 --> .....................CTAAACAAGCACAAAAGAGATTCCGAAGT
101 - 151
UN22029 --> CTTAACAAACACAGATTAGTAAAAGACTAGATGATCAAGAGTTTTCAAAC
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD535653 <-- ..................................................
EX753696 --> CTTAACAAACACAGATTAGTAAAAGACTAGATGATAAAGAGTTTTCAAAC
FD536848 --> CTTA-CAAACACAGATTAGTAAAAGACTAGATGAT-AAGAGTTTTCAAAC
EV543551 --> CTTAACAAACACAGATTAGTAAAAGACTAGATGA-CAAGAGTTTTCAAAC
EY909565 --> CTTAACAAACACAGATTAGTAAAAGACTAGATGA-CAAGAGTTTTCAAAC
EX753346 --> CTTAACAAACACAGATTAGTAAAAGACTAGATGATAAAGAGTTTTCAAAC
151 - 201
UN22029 --> ACACATCAGTTTAAGAAGACTGAAACATTGGAGGAACTGTGCATAATGTT
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD535653 <-- ..................................................
EX753696 --> ACACATCATTTTAAAAAAACTGAAACATTGGAGGAACTGTGCATAATGTT
FD536848 --> ACACATCAGTTTAAGAAGACTGAAACATGGGAGGAACTGTGCATAATGTT
EV543551 --> ACACATCAGTTTAAGAAGACTGAAACATTGGAGGAACTGTGCATAATGTT
EY909565 --> ACACATCAGTTTAAGAAGACTGAAACATTGGAGGAACTGTGCATAATGTT
EX753346 --> ACACATCAGTTTAAGAAGACTGAAACATTGGAGGAACTGTGCATAATGTT
201 - 251
UN22029 --> TTGTTTTGAGCCTCTCAATCTTTGTTCTTCGATTTCTCCACTGCACTTGG
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD535653 <-- ..................................................
EX753696 --> TTGTTTTGAGCCTCTCAATCTTTGTTCTTCGATTTCTCCACTGCACTTGG
FD536848 --> TTGTTTTGAGCCTC--AATCTTTGTTCTTCGATTCCTCCACTGCACTTGG
EV543551 --> TTGTTTTGAGCCTCTCAATCTTTGTTCTTCGATTTCTCCACTGCACTTGG
EY909565 --> TTGTTTTGAGCCTCTCAATCTTTGTTCTTCGATTTCTCCACTGCACTTGG
EX753346 --> TTGTTTTGAGCCTCTCAATCTTTGTTCTTCGATTTCTCCACTGCACTTGG
251 - 301
UN22029 --> AGCTAAACCAATAGAATCAGAGCCCTTCATGATCTTCAGTTTCCTACATG
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD535653 <-- ................................................TG Raphanus raphanistrum subsp. maritimus
EX753696 --> AGCTAAACCAATAAAGTCAAAGCCCTTCATGATCTTCAGTTTCCTACATG Raphanus raphanistrum subsp. maritimus
FD536848 --> AGCTAAACCGATAGAATCAGAGCCCTTCATGATCTTCAGTTTCCTACACG Raphanus raphanistrum subsp. raphanistrum (MS)
EV543551 --> AGCTAAACCAATAGAATCAGAGCCCTTCATGATCTTCAATTTCCTACACG Raphanus raphanistrum subsp. raphanistrum (NY)
EY909565 --> AGCTAAACCAATAGAATCAGAGCCCTTCATGATCTTCAATTTCCTACACG Raphanus raphanistrum subsp. raphanistrum (NY)
EX753346 --> AGCTAAACCAATAGAGTCAGAGCCCTTCATGATCTTCAGTTTCCTACATG Raphanus raphanistrum subsp. maritimus
301 - 351
UN22029 --> TTTCAGTAAATATCTCCCAAGGGACATCTCCAACAAGCATCCAGTCACCA
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD535653 <-- TTTCAGTAAATATCTCCCAAGGGACATCTCCAACAAGCATCCAGTCAC-A
EX753696 --> TTTCAGTAAATATCTCCCAAGGGACATCTCCAACAAGCATCCAGTCACCA
FD536848 --> TTTCAGTAAATATCTCCCAAGGGACATCTCCAACAAGCATCCAGTCACCA
EV543551 --> TTTCAGTAAATATCTCCCAAGGGACATCTCCAACAAGCATCCAGTCACCA
EY909565 --> TTTCAGTAAATATCTCCCAAGGGACATCTCCAACAAGCATCCAGTCACCA
EX753346 --> TTTCAGTAAATATCTCCCAAGGGACATCTCCAACAAGCATCCAGTCACCA
351 - 401
UN22029 --> TCTTTGTCTTCATAAGTAAGCACAAACTCTGATCCGTGAAGAAGATCCTT
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD535653 <-- TCTT-GTC-TCATAAGTAAGCACAAACTCTGATCCGTGAAGAAGATC-TT
EX753696 --> TCTTTGTCTTCATAAGTAAGCACAAACTCTGATCCGTGAAAAAAATCCTT
FD536848 --> TCTTTGTCTTCATAAGTAAGCACAAACTCTGATCCGTGAAGAAGATCCTT
EV543551 --> TCTTTGTCTTCATAAGTAAGCACAAACTCTGATCCGTGAAGAAGATCCTT
EY909565 --> TCTTTGTCTTCATAAGTAAGCACAGACTCTGATCCGTGAAGAAGATCCTT
EX753346 --> TCTTTGTCTTCATAAGTAAGCACAAACTCTGATCCGTGAAGAAGATCCTT
401 - 451
UN22029 --> CAACTTCACCTCACTCATTCTTTCCTTCCCATGAGCTCCATGAAGTCCAC
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD535653 <-- CAACTTCAC-TCACTCATTCTT-CCTTCCCATGAGCTCCATGAAGTCCAC
EX753696 --> CAACTTCACCTCACTCATTCTTTCCTTCCCATGAGCTCCATGAAGTCCAC
FD536848 --> CAACTTCACCTCACTCATTCTTTCCTTCCCATGAGCTCCATGAAGTCCAC
EV543551 --> CAACTTCACCTCACTCATTCTTTCCTTCCCATGAGCTCCATGAAGTCCAC
EY909565 --> CAACTTCACCTCACTCATTCTTTCCTTCCCATGAGCTCCATGAAGTCCAC
EX753346 --> CAACTTCACCTCACTCATTCTTTCCTTCCCATGAGCTCCATGAAGTCCAC
451 - 501
UN22029 --> ATTGACCGAGAGTGAAGCAGCTGAACATCTTCTCAAGTGCAGAAGACAAG
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD535653 <-- ATTGACCGAGAGTGAAGCAGCTGAACATCTTCTCAAGTGCAGAAGACAAG Raphanus raphanistrum subsp. maritimus
EX753696 --> ATTGACCGAGAGTGAAGCAGCTGAACATCTTCTCAAGTGCAGAA...... Raphanus raphanistrum subsp. maritimus
FD536848 --> ATTGACCAAGAGTAAAGCAGCTGAACATCTTCTCTAGTGCAGAAGACAAG Raphanus raphanistrum subsp. raphanistrum (MS)
EV543551 --> ATTGACCAAGAGTGAAGCAGCTGAACATCTTCTCAAGTGCAGAAGACAAG Raphanus raphanistrum subsp. raphanistrum (NY)
EY909565 --> ATTGACCAAGAGTGAAGCAGCTGAACATCTTCTCAAGTGCAGAAGACAAG Raphanus raphanistrum subsp. raphanistrum (NY)
EX753346 --> ATTGACCGAGAGTGAAGCAGCTGAACATCTTCTCAAGTGCAGAAGACAAG Raphanus raphanistrum subsp. maritimus
501 - 551
UN22029 --> TGTTGATAGCATGTGTAGGTTCCCAAATCAACTTTCCTCAGATAGGGAGC
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD535653 <-- TGTTGATAGCATGTGTAGGTTCCCAAATCAACTTTCCTCAGATAGGGAGC
EX753696 --> ..................................................
FD536848 --> TGCTGATAGCATGTGTAGGTTCCCAAATCAACTTTCCTCAGATAGGGAGC
EV543551 --> TGTTGATAGCAAGTGTAGGTTCCCAAATCAACTTTCCTCAGATAGGGAGC
EY909565 --> TGTTGATAGCAAGTGTAGGTTCCCAAATCAACTTTCCTCAGATAGGGAGC
EX753346 --> TGTTGATAGCATGTGTAGGTTCCCAAATCAACTTTCCTCAGATAGGGAGC
551 - 601
UN22029 --> ACCATCCATGCTCACCTTCACAAACAGAGCGCCAAGACCAGGTTTCCCAT
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD535653 <-- ACCATCCATGCTCACCTTCACAAACAGAGCGCCAAGACCAGGTTTCCCAT
EX753696 --> ..................................................
FD536848 --> ACCATCCATGCTCACCTTCACAAACAGAGCGCCAAGACCAGGTTTCCCAT
EV543551 --> ACCATCCATGCTCACCTTCACAAACAGAGCGCCGAGACCAGGTTTCCCAT
EY909565 --> ACCATCCATGCTCACCTTCACAAACAGAGCGCCGAGACCAGGTTTCCCAT
EX753346 --> ACCATCCATGCTCACCTTCACGAACAGAGCGCCAAGACCAGGTTTCCCAT
601 - 651
UN22029 --> CAACCTCATTAGTGTTCTTTGAAGTAGAAGAAGCCATTGTGTTCTTCCTG
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD535653 <-- CAACCTCATTAGTGTTCTTTGAAGTAGAAGAAGCCATTGTGTTCTTCCTG
EX753696 --> ..................................................
FD536848 --> CAACCTCATTAGTGTTCTTTGAAGTAGAAGAAGCCATAGTGTTCTTCCTG
EV543551 --> CAACCTCATTAGTGTTCTTGGAAGTAGAAGAAGCCATTGTGTTCTTCCTG
EY909565 --> CAACCTCATTAGTGTTCTTGGAAGTA........................
EX753346 --> CAACCTCATTAGTGTTCTTTGAAGTAGAAGAAGCCATTGTGTTCTTCCTG
651 - 701
UN22029 --> TAGGATCTGATTGGAGGCCAACCAACAACCTGTGCCTTGGCAGCAGGTGC
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD535653 <-- TAGGATCTGATTGGAGGCCAACCAACAACCTGTGCCTTGGCAGCAGGTGC
EX753696 --> ..................................................
FD536848 --> TAGGATCTGATTGGAGGCCAACCAACAACCTGTGCCT.............
EV543551 --> AAGGATCTGATTGGAGGCCAACCAACAACCTGTGCCTTGGCAGCAGGTGC
EY909565 --> ..................................................
EX753346 --> TAGGATCTGATTGGAGGCCAACCAACAACCTGTGCCTTGGCAGCAGGTGC
701 - 751
UN22029 --> ATTGTTGGAGCCACTCTTAGCAAGATATCCTCTTTTGTTGCCAGAAGCAG
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD535653 <-- ATTGTTGGAGCCACTCTTAGCAAGATATCCTCTTTTGTCGCCAGAAGCAG
EX753696 --> ..................................................
FD536848 --> ..................................................
EV543551 --> ATTGTTGGAGCCACTCTTAGCAAGATATCCTCTTTTGTTGCCTGAAGCAG
EY909565 --> ..................................................
EX753346 --> ATTGTTGGAGCCACTCTTAGCAAGATATCCTCTTTTGTTGCCAGAAGCAG
751 - 801
UN22029 --> CATGGTCTTTGCAAGGGAGCAGCGGGAAGAGAAGTTTCTCATCAGGAGTT
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD535653 <-- CATGGTCTTTGCAAGGGAGCAGCGGGAAGAGAAGTTTCTCATCAGGAGTT
EX753696 --> ..................................................
FD536848 --> ..................................................
EV543551 --> AATGGTCTTTGCAAGGGAGCAGCGGGAAGAGAAGTTTCTCATCAG-AGTT
EY909565 --> ..................................................
EX753346 --> CATGGTATTTGCAAGGGAGCAGCGGGAAGAGAAGTTTCTCATCAGGAGTT
801 - 851
UN22029 --> CTTGGACTCAGCAAACCGAAATCAGTTTCTCTCTGAGGAGACTGAGAGTC
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD535653 <-- CTTGGACTCAGCAAACCGAAATCAGTTTCTCTCTGAGGAGACTGAGAGTC
EX753696 --> ..................................................
FD536848 --> ..................................................
EV543551 --> CTCGGACTCAGCAAACCGAAATCAGTTTCTCTCT................
EY909565 --> ..................................................
EX753346 --> CTTGGAATCAGCAAACCGAAATCAGTTTCTCTCTGAGGAGACTGAGAGTC
851 - 901
UN22029 --> AGGAAGACCTAGCCTTAGCTCTGTAGCTTTGAGGTTGGGAAGGGTTGAGC
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD535653 <-- AGGAAGACCTAGCCTTAGCTCTGTAGCTTTGAGGTTGGGAAGGGTTGAGC
EX753696 --> ..................................................
FD536848 --> ..................................................
EV543551 --> ..................................................
EY909565 --> ..................................................
EX753346 --> AG--AGA-CTAGCCTTAGCTCTGTAGCTTTGAAGTTGatgaggctgctgc
901 - 951
UN22029 --> TGTCAACAGAGGAGCAATCAGACAAACCGAAGTAGTTGCGTTCCTTCAGA
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD535653 <-- TGTCAACAGAGGAGCAATCAGACAAACCGAAGTAGTTGCGTTCCTTCAGA
EX753696 --> ..................................................
FD536848 --> ..................................................
EV543551 --> ..................................................
EY909565 --> ..................................................
EX753346 --> tctctgtca.........................................
951 - 1001
UN22029 --> CCAGGTGATGTACCCAAACCCTCCTTGTCCACACTTTCCAATCGATAAGA
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD535653 <-- CCAGGTGATGTACCCAAACCCTCCTTGTCCACACTTTCCAATCGATAAGA
EX753696 --> ..................................................
FD536848 --> ..................................................
EV543551 --> ..................................................
EY909565 --> ..................................................
EX753346 --> ..................................................
1001 - 1051
UN22029 --> CATGAGATCTCTTAGTTTCCACACAACTTGTCTTTTTATGAAATCAGGAG
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD535653 <-- CATGAGATCTCTTAGTTTCCACACAACTTGTCTTTTTATGAAATCAGGAG
EX753696 --> ..................................................
FD536848 --> ..................................................
EV543551 --> ..................................................
EY909565 --> ..................................................
EX753346 --> ..................................................
1051 - 1101
UN22029 --> AGAGAAGGGAAGCAGAGGTCAAGGTCCATCCATGGAAAATGATATAACAA
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD535653 <-- AGAGAAGGGAAGCAGAGGTCAAGGTCCATCCATGGAAAATGATATAACAA
EX753696 --> ..................................................
FD536848 --> ..................................................
EV543551 --> ..................................................
EY909565 --> ..................................................
EX753346 --> ..................................................
1101 - 1151
UN22029 --> AAGCCC
~~~~~~
FD535653 <-- AAGCCC
EX753696 --> ......
FD536848 --> ......
EV543551 --> ......
EY909565 --> ......
EX753346 --> ......
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