Library    |     Search    |     Batch query    |     SNP    |     SSR  

Alignment for radish unigene UN22031

               1      -     51
UN22031        --> GGAGGAACAGCTCAAATTCCTTAAACCAACAAAATAATATAAAAGATCTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV529388       <-- ..................................................
EY918728       <-- ..................................................
FY445437       <-- ..................................................
EV545487       <-- ..................................................
EV532588       <-- ..................................................
FD975581       <-- ..................................................
FD558729       --> GGAGGAACAGCTCAAATTCCTTAAACCAACAAAATAATATAAAAGATCTC
EV550147       --> ..................................................
EV528662       --> ..................................................
FD979561       --> ..................................................
EV524381       --> ..................................................
FY441845       --> ..................................................
FD533024       --> ..................................................

               51     -    101
UN22031        --> TCTAGCTATAATCTTATCCTTTTAATTCATAAACTCCGTCAACGACAACC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV529388       <-- ..................................................
EY918728       <-- ..................................................
FY445437       <-- ..................................................
EV545487       <-- ..................................................
EV532588       <-- ..................................................
FD975581       <-- ..................................................
FD558729       --> TCTAGCTATAATCTTATCCTTTTAATTCATAAACTCCGTCAACGACAACC
EV550147       --> ...ggcgaccaagtccatcgagcgtgagATAAACTCCGTCAACGACAACC
EV528662       --> ..................................................
FD979561       --> ..................................................
EV524381       --> ..................................................
FY441845       --> ..................................................
FD533024       --> ..................................................

               101    -    151
UN22031        --> CTCTGATCGCCGTTTCGAGAAACAAGGCCATCCACGGAGGCAACTTCCAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV529388       <-- ..................................................
EY918728       <-- ..................................................
FY445437       <-- ..................................................
EV545487       <-- ..................................................
EV532588       <-- ..................................................
FD975581       <-- ..................................................
FD558729       --> CTCTGATCGCCGTTTCGAGAAACAAGGCCATCCACGGAGGCAACTTCCAG
EV550147       --> CTCTGATCGACGTTTCGAGAAACAAAGCCATCCACGGAGGCAACTTCCAG
EV528662       --> ..................................................
FD979561       --> ..................................................
EV524381       --> ..................................................
FY441845       --> ..................................................
FD533024       --> ..................................................

               151    -    201
UN22031        --> GGGACACCCATCGGTGTCTCCATGGACAACACTCGTTTGGCTGTCGCGGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV529388       <-- ..................................................
EY918728       <-- ..................................................
FY445437       <-- ..................................................
EV545487       <-- ..................................................
EV532588       <-- ..................................................
FD975581       <-- ..................................................
FD558729       --> GGGACACCCATCGGTGTCTCCATGGACAACACTCGTTTGGCTGTCGCGGC
EV550147       --> GGGACACCCATCGGTGTCTCCATGGACAACACTCGTTTGGCTGTCGCGGC
EV528662       --> .................................................a
FD979561       --> ..................................................
EV524381       --> ..................................................
FY441845       --> ..................................................
FD533024       --> ..................................................

               201    -    251
UN22031        --> GATAGGGAAGCTCATGTTCGCTCAGTTCTCCGAGCTGGTCAACGATTATT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV529388       <-- ..................................................
EY918728       <-- ..................................................
FY445437       <-- ..................................................
EV545487       <-- ..................................................
EV532588       <-- ..................................................
FD975581       <-- ..................................................
FD558729       --> GATAGGGAAGCTCATGTTCGCTCAGTTCTCCGAGCTGGTCAACGATTATT
EV550147       --> GATAGGGAAGCTCATGTTCGCTCAGTTCTCCGAGCTGGTCAACGATTATT
EV528662       --> gggAGGGAAGCTCATGTTCGCTCAGTTCTCCGAGCTGGTCAACGATTATT
FD979561       --> ..........................................gGATTATT
EV524381       --> ..................................................
FY441845       --> ..................................................
FD533024       --> ..................................................

               251    -    301
UN22031        --> ACAACAACGGTCTTCCTTCGAACCTAACCGCTTCGAATAACCCTAGTTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV529388       <-- ..................................................
EY918728       <-- ..................................................
FY445437       <-- ..................................................
EV545487       <-- ..................................................
EV532588       <-- ..................................................
FD975581       <-- ..................................................
FD558729       --> ACAACAACGGTCTTCCTTCGAACCTAACTGCTTCGAATAACCCTAGTTTG
EV550147       --> ACAACAACGGTCTTCCTTCGAACCTAACCGCTTCGAATAACCCTAGTTTG
EV528662       --> ACAACAACGGTCTTCCTTCGAACCTAACCGCTTCGAATAACCCTAGTTTG
FD979561       --> ACAACAACGGTCTTCCTTCGAACCTAACCGCTTCGAATAACCCTAGTTTG
EV524381       --> ..................................................
FY441845       --> ..................................................
FD533024       --> ..................................................

               301    -    351
UN22031        --> GACTACGGTTTCAAAGGAGCGGAGATCGCGATGGCTTCGTACTGTTCTGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV529388       <-- ..................................................
EY918728       <-- ..................................................
FY445437       <-- ..................................................
EV545487       <-- ..................................................
EV532588       <-- ..................................................
FD975581       <-- ..................................................
FD558729       --> GACTATGGTTTCAAAGGAGCGGAGATCGCGATGGCTTCGTACTGTTCTGA
EV550147       --> GACTACGGTTTCAAAGGAGCGGAGATCGCTATGGCTTCGTACTGTTCCGA
EV528662       --> GACTACGGTTTCAAAGGAGCGGAGATCGCGATGGCTTCGTACTGTTCTGA
FD979561       --> GACTACGGTTTCAAAGGAGCGGAGATCGCGATGGCTTCGTACTGTTCTGA
EV524381       --> ..................................................
FY441845       --> ..................................................
FD533024       --> ..................................................

               351    -    401
UN22031        --> GCTTCAGTACTTGGCCAATCCAGTGACTAGCCATGTTCAATCAGCAGAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV529388       <-- ..................................................
EY918728       <-- ..................................................
FY445437       <-- ..................................................
EV545487       <-- ..................................................
EV532588       <-- ..................................................
FD975581       <-- ..................................................
FD558729       --> GCTTCAGTACTTAGCCAATCCAGTGACTAGCCATGTTCAATCAGCGGAGC
EV550147       --> GCTTCAGTACTTGGCCAATCCAGTGACTAGCCATGTTCAATCAGCAGAGC
EV528662       --> GCTTCAGTACCTGGCCAATCCAGTGACTAGCCATGTTCAATCTGCAGAGC
FD979561       --> GCTTCAGTACTTGGCCAATCCAGTGACTAGCCATGTTCAATTAGCAGACC
EV524381       --> ...........................................GCAGAGC
FY441845       --> ..................................................
FD533024       --> ..................................................

               401    -    451
UN22031        --> AACATAATCAAGACGTGAACTCTTTAGGACTGATCTCATCTCGCAAGACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV529388       <-- .........................AGGACTGATCTCATCTCGCAAGACA
EY918728       <-- ..................................................
FY445437       <-- ..................................................
EV545487       <-- ..................................................
EV532588       <-- ..................................................
FD975581       <-- ..................................................
FD558729       --> AGCATAACCAAGACGTGAACTCTTTAGGACTTATCTCGTCACGCAAAACA
EV550147       --> AGCATAACCAAGACGTGAACTCTTTAGGACTAATCTCGTCACGCAAGACA
EV528662       --> AACATAATCAAGACGTGAACTCCTTAGGACTGATCTCATCTCGCAAGACA
FD979561       --> AACATAATCAAGACGTGAACTCTTTAGGACTGATCTCATCTCGCAAGACA
EV524381       --> AACATAATCAAGACGTGAACTCTTTAGGACTGATCTCATCTCGCAAGACA
FY441845       --> ..................................................
FD533024       --> ..................................................

               451    -    501
UN22031        --> GCTGAAGCTGTCGACATACTCAAACTCATGTCAACCACGTTCCTTGTCGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV529388       <-- GCTGAAGCTGTCTACATACTCAAACTCATGTCAACCACGTTCCTTGTCGG  Raphanus raphanistrum subsp. maritimus
EY918728       <-- ......GCTGTCGACATACTCAAACTCATGTCGACAACGTTCCTTGTCGG  Raphanus raphanistrum subsp. landra
FY445437       <-- .........GTCGACATACTCAAACTCATGTCAACCACGTTCCTTGTCGG  Raphanus sativus cv GSK3-1
EV545487       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV532588       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD975581       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD558729       --> GCTGAAGCTGTCGACATACTCAAACTCATGTCGACAACGTTCCTTGTCGG  Raphanus raphanistrum subsp. landra
EV550147       --> GCGGAAGCTGTCGACATACTGAAACTCATGTCGACAACGTTCCTTGTCGG  Raphanus raphanistrum subsp. raphanistrum (NY)
EV528662       --> GCTGAAGCTGTCGACATACTCAAACTCATGTCAACCACGTTCCTTGTCGG  Raphanus raphanistrum subsp. maritimus
FD979561       --> GCTGAAGCTGTCGACATACTCAAACTCATGTCAACCACGTTCCTTGT-GG  Raphanus raphanistrum subsp. raphanistrum (NY)
EV524381       --> GCTGAAGCTGTCTACATACTCAAACTCATGTCAACCACGTTCCTTGTCGG  Raphanus raphanistrum subsp. maritimus
FY441845       --> ..................................................  Raphanus sativus cv GSK3-1
FD533024       --> ..................................................  Raphanus raphanistrum subsp. maritimus

               501    -    551
UN22031        --> AATCTGCCAAGCTGTCGATCTAAGACACTTGGAGGAGAATCTAAAACAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV529388       <-- AATCTGCCAAGCTGTCGATCTAAGACACTTGGAGGAGAATCTAAAACAAA
EY918728       <-- AATCTGCCAAGCTGTCGATCTAAGACACTTGGAGGAGAATCTAAAACAAA
FY445437       <-- AATCTGCCAAGCTGTCGATCTAAGACACTTGGAGGAGAATCTAAAACAAA
EV545487       <-- .......................GACACTTGGAGGAGAATCTAAAACAAA
EV532588       <-- ..........................................AAAACAAA
FD975581       <-- ..................................................
FD558729       --> AATCTGCCAAGCTGTCGATCTAAGACACTTGGAGGAGAATCTAAAACAAA
EV550147       --> AATCTGCCAAGCTGTCGACCTAAGACACTTGGAGGAGAATCTAAAACAAA
EV528662       --> AATCTGCCAAGCTGTCGATCTAAGACACTTGGAGGAGAATCTAAAACAAA
FD979561       --> AATCTGCCAAGCTGTCGATCTAAGACACTTGGAGGAGAATCTAAAACAAA
EV524381       --> AATCTGCCAAGCTGTCGATCTAAGACACTTGGAGGAGAATCTAAAACAAA
FY441845       --> ..................................................
FD533024       --> ..................................................

               551    -    601
UN22031        --> CGGTCAAGAACACAGTCTCACAAGTGGCTAAGAAAGTTCTAACCACTGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV529388       <-- CGGTCAAGAACACAGTCTCACAAGTGGCTAAGAAAGTCCTAACCACTGGA  Raphanus raphanistrum subsp. maritimus
EY918728       <-- CGGTGAAGAACACAGTCTCTCAAGTCGCTAAGAAAGTTCTAACAACTGGA  Raphanus raphanistrum subsp. landra
FY445437       <-- CGGTCAAGAACACAGTCTCACAAGTGGCTAAGAAAGTTCTAACCACTGGA  Raphanus sativus cv GSK3-1
EV545487       <-- CGGTCAAGAACACAGTCTCTCAAGTCGCTAAGAAAGTTCTAACAACTGGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV532588       <-- CGGTCAAGAACACAGTCTCACAAGTGGCTAAGAAAGTTCTAACCACTGGA  Raphanus raphanistrum subsp. maritimus
FD975581       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD558729       --> CGGTGAAGAACACAGTCTCTCAAGTCGCTAAGAAAGTTCTAACAACTGGA  Raphanus raphanistrum subsp. landra
EV550147       --> CGGTCAAGAACACAGTCTCTCAAGTCGCTAAGAAAGTTCTAACAACTGGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV528662       --> CGGTCAAGAACACAGTCTCACAAGTGGCTAAGAAAGTTCTAACCACTGGA  Raphanus raphanistrum subsp. maritimus
FD979561       --> CGGTCAAGAACACAGTCTCACAAGTGGCTAAGAAAGTTCTAACCACTGGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV524381       --> CGGTCAAGAACACAGTCTCACAAGTGGCTAAGAAAGTCCTAACCACTGGA  Raphanus raphanistrum subsp. maritimus
FY441845       --> ..................................................  Raphanus sativus cv GSK3-1
FD533024       --> ..................................................  Raphanus raphanistrum subsp. maritimus

               601    -    651
UN22031        --> GTCAACGGTGAGCTTCACCCATCTCGCTTCTGCGAGAAAGATTTACTCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV529388       <-- GTCAACGGTGAGCTTCACCCATCACGCTTCTGCGAGAAATATTTACTCAA  Raphanus raphanistrum subsp. maritimus
EY918728       <-- GTCAACGGTGAGCTTCACCCATCTCGCTTCTGCGAGAAAGACTTACTCAA  Raphanus raphanistrum subsp. landra
FY445437       <-- GTCAACGGTGAGCTTCACCCATCTCGCTTCTGCGAGAAAGATTTACTCAA  Raphanus sativus cv GSK3-1
EV545487       <-- GTCAACGGTGAGCTTCACCCATCTCGCTTCTGCGAGAAAGACTTACTCAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV532588       <-- GTCAACGGTGAGCTTCACCCATCACGCTTCTGCGAGAAAGATTTACTCAA  Raphanus raphanistrum subsp. maritimus
FD975581       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD558729       --> GTCAACGGTGAGCTTCACCCATCTCGCTTCTGCGAGAAAGACTTACTCAA  Raphanus raphanistrum subsp. landra
EV550147       --> GTCAACGGTGAGCTTCACCCATCTCGCTTCTGCGAGAAAGACTTACTCAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV528662       --> GTCAACGGTGAGCTTCACCCATCACGCTTCTGCGAGAAAGATTTACTCAA  Raphanus raphanistrum subsp. maritimus
FD979561       --> GTCAACGGTGAGCTTCACCCATCACGCTTCTGCGAGAAAGATTTACTCAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV524381       --> GTCAACGGTGAGCTTCACCCATCACGCTTCTGCGAGAAATATTTACTCAA  Raphanus raphanistrum subsp. maritimus
FY441845       --> ..................................................  Raphanus sativus cv GSK3-1
FD533024       --> ..................................................  Raphanus raphanistrum subsp. maritimus

               651    -    701
UN22031        --> AGTCGTGGACCGTGAGCAAGTCTTCACGTACGCGGACGATCCATGCAGCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV529388       <-- AGTCGTGGACCGTGAGCAAGTCTTCACGTACGCGGACGATCCATGCAGCG
EY918728       <-- AGTCGTCGACCGTGAGCAAGTCTTCACGTACGCGGACGATCCATGCAGCG
FY445437       <-- AGTGGTGGACCGTGAGCAAGTCTTCACGTACGCGGACGATCCATGCAGCG
EV545487       <-- AGTCGTCGACCGTGAGCAAGTCTTCACGTACGCGGACGATCCATGCAGCG
EV532588       <-- AGTCGTGGACCGTGAGCAAGTCTTCACGTACGCGGACGATCCATGCAGCG
FD975581       <-- ..................................................
FD558729       --> AGTCGTTGACCGTGAGCAAGTCTTCACGTACGCGGACGATCCATGCAGCG
EV550147       --> AGTCGTCGACCGTGAGCAAGTCTTCACGTACGCGGACGATCCATGCAGCG
EV528662       --> AGTCGTGGACCGTGAGCAAGTCTTCACGTACGCGGACGATCCATGCAGCG
FD979561       --> AGTCGTGGACCGTGAGCAAGTCTTCACGTACGCGGACGATCCATGCAGCG
EV524381       --> AGTCGTGGACCGTGAGCAAGTCTTCACGTACGCGGACGATCCATGCAGCG
FY441845       --> ..................................................
FD533024       --> ..................................................

               701    -    751
UN22031        --> CAACGTACCCGTTGATCCAGAAGCTGAGGCAAGTCATCGTTGACCATGCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV529388       <-- CAACGTACCCGTTGATCCAGAAGCTGAGGCAAGTCATCGTTGACCATGCT
EY918728       <-- CAACGTACCCGTTGATCCAGAAGCTGAGGCAAGTCATCGTTGACCATGCT
FY445437       <-- CAACGTACCCGTTGATCCAGAAGCTGAGGCAAGTCATCGTTGACCATGCT
EV545487       <-- CAACGTACCCGTTGATCCAGAAGCTGAGGCAAGTCATCGTTGACCATGCT
EV532588       <-- CAACGTACCCGTTGATCCAGAAGCTGAGGTAAGTCATCGTTGACCATGCT
FD975581       <-- ..................................................
FD558729       --> CAACGTACCCGTTGATCCAGAAGCT.........................
EV550147       --> CAACGTACCCGTTGATCCAGAAGCTGAGGCAAGTCATCGTTGACCATGCT
EV528662       --> CAACGTACCCGTTGATCCAGAAGCTGAGGTAAGTCATCGTTGACCATGCT
FD979561       --> CAACGTACCCGTTGATCCAGAAGCTGAGGCAAGTCATCGTTGACCATGCT
EV524381       --> CAACGTACCCGTTGATCCAGAAGCTGAGGCAAGTCATCGTTGACCATGCT
FY441845       --> gcACGTACCCGTTGATCCAGAAGCTGAGGCAAGTCATCGTTGACCATGCT
FD533024       --> ..................................................

               751    -    801
UN22031        --> TTGGTCAACGGTGAGAGCGAGAAGAATGCAATGACTTCGATCTTCCATAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV529388       <-- TTGGTCAACGGTGAGAGCGAGAAGAATGCAATGGCTCCGATCTTCCATAA
EY918728       <-- TTAGTCAACGGTGAGAGCGAGAAGAATGCAATGACTTCGATCTTCCATAA
FY445437       <-- TTGGTCAACGGTGAGAGCGAGAAGAATGCAATGACTTCGATCTTCCATAA
EV545487       <-- TTGGTCAACGGTGAGAGCGAGAAGAATGCAATGACTTCGATCTTCCATAA
EV532588       <-- TTGGTCAACGGTGAGAGCGAGAAGAATGCAATGACTTCGATCTTCCATAA
FD975581       <-- ..................................................
FD558729       --> ..................................................
EV550147       --> TTGGTCAACGGTGAGAGCGAG.............................
EV528662       --> TTGGTCAACGGTGAGAGCGAGAAGAATGCAATGACTTCGATCTTCCATAA
FD979561       --> TTGGTCAACGGTGAGAGCGAGAAGAATGCAATGACTTCGATCTTCCATAA
EV524381       --> TTGGTCAACGGTGAGAGCGAGAAGAATGCAATGGCTCCGATCTTCCATAA
FY441845       --> TTGGTCAACGGTGAGAGCGAGAAGAATGCAATGACTTCGATCTTCCATAA
FD533024       --> ..................................................

               801    -    851
UN22031        --> AATTGGAGCTTTTGAGGAGGAGCTCAAAGCGGTGCTTCCTAAAGAAGTGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV529388       <-- AATTGGAGCTTTTGAGGAGGAGCTCAAAGCGGTGCTTCCTAAAGAAGTGG
EY918728       <-- AATTGGAGCTTTTGAGGAGGAGCTCAAAGCGGTGCTTCCTAAAGAAGTGG
FY445437       <-- AATTGGAGCTTTTGAGGAGGAGCTCAAAGCGGTGCTTCCTAAAGAAGTGG
EV545487       <-- AATTGGAGCTTTTGAGGAGGAGCTCAAAGCGGTGCTTCCTAAAGAAG-CG
EV532588       <-- AATTGGAGCTTTTGAGGAGGAGCTCAAAGCGGTGCTTCCTAAAGAAGTGG
FD975581       <-- ......................CTCAAAGCGGTGCTTCCTAAAGAAGTGG
FD558729       --> ..................................................
EV550147       --> ..................................................
EV528662       --> AATTGGAGCTTTTGAGGAGGAGCTCAAAGCGGTGCTTCCTAAAGAAGTGG
FD979561       --> AATTGGAGCTTTTGAGGAGGAGCTCAAAGCGGTGCTTCCTAAAGAAGTGG
EV524381       --> AATTGGAGCTTTTGAGGAGGAGCTCAAAGCGGTGCTTCCTAAAGAAGTGG
FY441845       --> AATTGGAGCTTTTGAGGAGGAGCTCAAAGCGGTGCTTCCTAAAGAAGTGG
FD533024       --> ..................................................

               851    -    901
UN22031        --> ACGCAGCTAGAGCGGCGTATGATAACGGTACGGCTGCTATACCGAACAGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV529388       <-- ACGCAGCTAGAGCGGCGTATGATAACGGTACGGCTGCTATACCGAACAGG
EY918728       <-- ACGCAGCTAGAGCGGCGTATGATAACGGTACGGCTGCTATACCGAACAGG
FY445437       <-- ATGCAGCCAGAGCGGCGTATGATAACGGTACGGCTGCTATACCGAACAGG
EV545487       <-- ATGCAGCTAGAGCGGCGTATGATAACGGTACGGCTGCTATACCGAACAGG
EV532588       <-- ACGCAGCTAGAGCGGCGTATGATAACGGTACGGCTGCTATACCGAACAGG
FD975581       <-- ACGCAGCTAGAGCGGCGTATGATAACGGTACGGCTGCTATACCGAACAGG
FD558729       --> ..................................................
EV550147       --> ..................................................
EV528662       --> ACGCAGCTAGAGCGGCGTATGATAACGGTACGGCTGCTATACCGAACAGG
FD979561       --> ACGCAGCTAGAGCGGCGTATGATAACGGTACGGCTGCTATACCGA.....
EV524381       --> ACGCAGCTAGAGCGGCGTATGATAACGGTACGGCTGCTATACCGAACAGG
FY441845       --> ATGCAGCTAGAGCGGCGTATGATAACGGTACGGCTGCTATACCGAACAGG
FD533024       --> ..................................................

               901    -    951
UN22031        --> ATCAA-GGAGTGTAGGTCGTATCCTTTGTATAGGTTCGTGAGGGAGGAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV529388       <-- ATCAA-GGAGTGTAGGTCGTATCCTTTGTATAGGTTCGTGAGGGAGGAGC
EY918728       <-- ATCAA-GGAGTGTAGGTCGTATCCTTTGTATAGGTTCGTGAGGGAGGAGC
FY445437       <-- ATCAA-GGAGTGTAGGTCGTATCCTTTGTATAGGTTCGTGAGGGAGGAGC
EV545487       <-- ATCAA-GGAGTGTAGGTCGTATCCTTTGTATAGGTTCGTGAGGGAGGAGC
EV532588       <-- GTCAA-GGAGTGTAGGTCGTATCCTTTGTATAGGTTCGTGAGGGAGGAGC
FD975581       <-- ATCAA-GGAGTGTAGGTCGTATCCTTTGTATAGGTTCGTGAGGGAGGAGC
FD558729       --> ..................................................
EV550147       --> ..................................................
EV528662       --> GTCAAAGGAGTGTAGGTCGTATCCTTTGTA....................
FD979561       --> ..................................................
EV524381       --> ATCAA-GGAGTGTAGGTCGTATCCTTTGTATAGGTTCGTGAGGGAGGAGC
FY441845       --> ATCAA-GGAGTGTAGGTCGTATCCTTTGTATAGGTTCGTGAGGGAGGAGC
FD533024       --> ..................................................

               951    -   1001
UN22031        --> TTGGAACAGAGCTTTTGACCGGAGAGAAAGTCACGTCGCCGGGGGAAGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV529388       <-- TTGGAACAGAGCTTTTGACCGGAGAGAAAGTCACGTCGCCGGGGGAAGAG  Raphanus raphanistrum subsp. maritimus
EY918728       <-- TTGGAACAGAGCTTTTGACCGGAGAGAAAGTCACGTCGCCGGGGGAAGAG  Raphanus raphanistrum subsp. landra
FY445437       <-- TTGGAACAGAGCTTTTGACCGGAGAGAAAGTCACGTCGCCGGGAGAAGAG  Raphanus sativus cv GSK3-1
EV545487       <-- TTGGAACAGAGCTTTTGACCGGAGAGAAAGTCACGTCGCCGGGAGAAGAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EV532588       <-- TTGGAACAGAGCTTTTGACCGGAGAAAAAGTCACGTCGCCGGGGGAAGAG  Raphanus raphanistrum subsp. maritimus
FD975581       <-- TTGGAACAGAGCTTTTGACCGGAGAGAAAGTCACGTCGCCGGGGGAAGAG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD558729       --> ..................................................  Raphanus raphanistrum subsp. landra
EV550147       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV528662       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD979561       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV524381       --> TTGGAACAGAGCTTTTGACCGGAGAGAAAGTCACGTCGCCGGGGGAAGAG  Raphanus raphanistrum subsp. maritimus
FY441845       --> TTGGAACAGAGCTTTTGACCGGAGAGAAAGTCACGTCGCCGGGAGAAGAG  Raphanus sativus cv GSK3-1
FD533024       --> ..................................................  Raphanus raphanistrum subsp. maritimus

               1001   -   1051
UN22031        --> TTTGATAAGGTTTTCACGGCGATTTGTGAAGGGAAGATCATTGATCCGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV529388       <-- TTTGATAAGGTTTTCACGGCGATTTGTGAAGGGAAGATCATTGATCCGTT
EY918728       <-- TTTGATAAGGTTTTCACGGCGATTTGTGAAGGGAAGATCATTGATCCGTT
FY445437       <-- TTTGATAAGGTTTTCACGGCGATTTGTGAAGGGAAGATCATTGATCCGTT
EV545487       <-- TTTGATAAGGTTTTCACGGCGATTTGTGAAGGGAAGACCATTGATCCGTT
EV532588       <-- TTTGATAAGGTTTTCACGGCGATTTGTGAAGGGAAGATCATTGATCCGTT
FD975581       <-- TTTGATAAGGTTTTCACGGCGATTTGTGAAGGGAAGATCATTGATCCGTT
FD558729       --> ..................................................
EV550147       --> ..................................................
EV528662       --> ..................................................
FD979561       --> ..................................................
EV524381       --> TTTGATAAGGTTTTCACGGCGATTTGTGAAGGGAAGATCATTGATCCGTT
FY441845       --> TTTGATAAGGTTTTCACGGCGATTTGTGAAGGGAAGATCATTGATCCGTT
FD533024       --> ..................................................

               1051   -   1101
UN22031        --> GATGGAGTGTCTCGATGAGTGGAACGGAGCTCCCATTCCTATATGTTAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV529388       <-- GATGGAGTGTCTCGATGAGTGGAACGGAGCTCCCATTCCTATATGTTAAG
EY918728       <-- GATGGAGTGTCTCGGTGAGTGGAACGGAGCTCCCATTCCTATATGTTAAG
FY445437       <-- GATGGAGTGTCTCGATGAGTGGAACGGAGCTCCCATTCCTATATGTTAAG
EV545487       <-- GATGGAGCGTCTCGATGAGTGGAACGGAGCTCCCATTCCTATATGTTAAG
EV532588       <-- GATGGAGTGTCTCGATGAGTGGAACGGAGCTCCCATTCCTATATGTTAAG
FD975581       <-- GATGGAGTGTCCCGATGAGTGGAACGGAGCTCCCATTCCTATATGTTAAG
FD558729       --> ..................................................
EV550147       --> ..................................................
EV528662       --> ..................................................
FD979561       --> ..................................................
EV524381       --> GATGGAGTGTCTCGATGAGTGGAACGGAGCTCCCATTCCTATATGTTAAG
FY441845       --> GATGGAGTGTCTCGATGAGTGGAACGGAGCTCCCATTCCTATATGTTAAG
FD533024       --> ..................................................

               1101   -   1151
UN22031        --> AGTGATTAAAGGTTCTCTGTTTTTTTTTT-ACTATAAAGTTTTTTCTTTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV529388       <-- AGTGATTAAAGGTTCTCTGTTTTTTTTTTTACTATAAAGTTTTTTCTTTA
EY918728       <-- AGTGATTAAAGGTTCTCTGTTTTTTTTT--ACCATAAAGTTTTTTCTTTA
FY445437       <-- AGTGATTAAAGGTTCTCTGTTTTTTTTTT-ACTATAAAGTTTTTTCTTTA
EV545487       <-- AGTGATTAAAGGTTTTCTGTTTTTTTTTT-ACTATAAAGTTTTTTCTTTA
EV532588       <-- AGTGATTAAAGGTTCTCTGTTTTTTTTT--ACTATAAAGTTTTTTCTTTA
FD975581       <-- AGT-ATTAAAGGTTCTCTGTTTTTTTTTT-ACTATAAAGTTTTTTCTTTA
FD558729       --> ..................................................
EV550147       --> ..................................................
EV528662       --> ..................................................
FD979561       --> ..................................................
EV524381       --> AGTGATTAAAGGTTCTCTGTTTTTTTTTTTACTATAAAGTTTTTTCTTTA
FY441845       --> AGTGATTAAAGGTTCTCTGTTTTTTTTTT-ACTATAAAGTTTTTTCTTTA
FD533024       --> ..............................ACTATAAAGTTTTTTCTTTA

               1151   -   1201
UN22031        --> AATGTCTGAATAATTTTACCAAATGATTGCCTGTGAAGTGGTCTCTATTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV529388       <-- AATGTCTGAATAATTTTACCAAATGATTGCCTGTGAAGTGGTCTCTATTT
EY918728       <-- AATGTCTGAATAATTTTACCAAATGATTGCCTGTGAAGTGGTTTCTATCT
FY445437       <-- AATGTCTGAATAATTTTACCAAATGATTGCCTGTGAAGTGGTCTCTATTT
EV545487       <-- AATGTCTGAATAATTTTACCAAATGATTGCCTGTGAAGTGGTCTCTATTT
EV532588       <-- AATGTCTGAATAATTTTACCAAATGATTGCCTGTGAAGTGGTCTCTATTT
FD975581       <-- AATGTCTGAATAATTTTACCAAATGATTGCCTGTGAAGTGGTCTCTATTT
FD558729       --> ..................................................
EV550147       --> ..................................................
EV528662       --> ..................................................
FD979561       --> ..................................................
EV524381       --> AATGTCTGAATAATTTTACCAAATGATTGCCTGTGAAGTGGTCTCTATTT
FY441845       --> AATGTCTGAATAATTTTACCAAATGATTGCCTGTGAAGTGGTCTCTATTT
FD533024       --> AATGTCTGAATAATTTTACCAAATGATTGCCTGTGAAGTGGTCTCTATTT

               1201   -   1251
UN22031        --> GTCTAGTTTACAACTTGTCTTTAAAACTCATTGTAAGTTCTCAAATGAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV529388       <-- GTCTAGTTTACAACTTGTCTTTAAAACTCATTGTAAGTTCTCAAATGAAC
EY918728       <-- GTCTAGTTTACAACTTGTCTGTAAAACTCATTGTAAGTTCTCAAATGAAC
FY445437       <-- GTCTAGTTTACAACTTGTCTTTAAAACTCATTGTAAGTTCTCAAATGAAC
EV545487       <-- GTCTAGTTTACAACTTGTCTTTAAAACTCATTTTAAGTTCTCAAATGAAC
EV532588       <-- GTCTAGTTTACAACTTGTCTTTAAAACCCATTGTAAGTTCTCAAATGAAC
FD975581       <-- GTCTAGTTTACAACTTGTCTTTAAAACTCATTGTAAGTTCTCAAATGAAC
FD558729       --> ..................................................
EV550147       --> ..................................................
EV528662       --> ..................................................
FD979561       --> ..................................................
EV524381       --> GTCTAGTTTACA-CTTGTCTTT............................
FY441845       --> GTCTAGTTTACAACTTGTCTTTAAAACTCATTGTAAGTTCTCAAATGAAC
FD533024       --> GTCTAGTTTACAACTTGTCTTTAAAACTCATTGTAAGTTCTCAAATGAAC

               1251   -   1301
UN22031        --> ATTTTTTTTTCTTGTTACAAGTGTGAAATGATACATTTTTCTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV529388       <-- ATTTTTTTTTCTTGTTACAAGTGTGAAATGATACATTTTTCTCT
EY918728       <-- AATTTTTTTTCTTGTc............................
FY445437       <-- ATTTTTTTTct.................................
EV545487       <-- ATTTTTTTTTCTTGTTACAAGTGTGAAATGATACATTTTTCTC.
EV532588       <-- ATTTTTTTT-CTTGTTACAAGTGTGAAATGATACATTTTTCTC.
FD975581       <-- ATTTTTTTTTCTTGTTACAAGTGTGAAATGATACATTTTTCTC.
FD558729       --> ............................................
EV550147       --> ............................................
EV528662       --> ............................................
FD979561       --> ............................................
EV524381       --> ............................................
FY441845       --> ATTTTTTTTT..................................
FD533024       --> ATTTTTTTT-CTTGTTACAAGTGTGAAATGATACATTTTTCTC.