RadishBase

| | | |
Alignment for radish unigene UN22057

               1      -     51
UN22057        --> GGGATACACTGTCATCGTTGGCTTATTTCCACTCTTCTGCGAATTGCAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV546882       <-- ..................................................
FD952303       <-- ..................................................
FD582746       <-- ..................................................
EV551851       --> GGGATACACTGTCATCGTTGGCTTATTTCCACTCTTCTGCGAATTGCAAC
EX755143       --> GGGATACACTGTCATCGTTGGCTTATTTCCACTCTTCTGCGGATTGCAAC
FD956493       --> .....ggACTGTCATCGTTGGCTTATTTCCACTCTTCTGCGAATTGCAAC
FY435755       --> .................................................C
FD578618       --> ..................................................
FY443557       --> ..................................................
FY444532       --> ..................................................
FD560048       --> ..................................................
FD563897       --> ..................................................
FD956412       --> ..................................................

               51     -    101
UN22057        --> TTGTGGTAAAAAA-TACTTGCGTAGCTCGAAGATCTTCCTGAATGGGTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV546882       <-- ..................................................
FD952303       <-- ..................................................
FD582746       <-- ..................................................
EV551851       --> TTGTGGTAAAAAA-TACTTGCGTAGCTCGAAGGTCCTCCTGAATGGGTTC
EX755143       --> TTGTGGTAAAAAA-TACTTGCGTAGCTCGAAGATCCTCCTGAATGGGTTC
FD956493       --> TTGTGGTAAAAAAATACTTGCGTATCTCGAAGATCTTCCTGAATGGGTTC
FY435755       --> TTGTGGTAAAAAA-TACTTGCGTAGCTCGAAGATCTTCCTGAATGGGTTC
FD578618       --> .....ggAAAAAA-TACTTGCGTAGCTCGAAGATCCTCCTGAATGGGTTC
FY443557       --> .................TTGCGTAGCTCGAAGATCTTCCTGAATGGGTTC
FY444532       --> .................TTGCGTAGCTCGAAGATCTTCCTGAATGGGTTC
FD560048       --> .................ggGCGTAGCTCGAAGATCTTCCTGAATGGGTTC
FD563897       --> ..................................................
FD956412       --> ..................................................

               101    -    151
UN22057        --> TCTCAACTTGCCTCACGCTTCATCGTTCAAGGGAGGAAGTGAAACGTTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV546882       <-- ..................................................
FD952303       <-- ..................................................
FD582746       <-- ..................................................
EV551851       --> TCTCAACTTGCCTCACGCTTCATCGTTCAAGGGAGGAAGTGAAACGTTTC
EX755143       --> TCTCAACTTGCCTCACGCTTCATCGTTCAAGGGAGGAAGTGAAACGTTTC
FD956493       --> TCTCAACTTGCCTCACGCTTCATCCTTCAAGGGAGGAAGTGAAACGTTTC
FY435755       --> TCTCAACTTGCCTCACGCTTCATCGTTCAAGGGAGGAAGTGAAACGTTTC
FD578618       --> TCTCAACTTGCCTCACGCTTCATCGTTCAAGGGAGGAAGTGAAACGTTTC
FY443557       --> TCTCAACTTGCCTCACGCTTCATCGTTCAAGGGAGGAAGTGAAACGTTTC
FY444532       --> TCTCAACCTGTCTCGCGCTTCATCGTTCAAGGGAGGAAGTGAAACGTTTC
FD560048       --> TCTCAACTTGCCTCACGCTTCATCCTTCAAGGGAGGAAGTGAAACGTTTC
FD563897       --> ..................................................
FD956412       --> ..................................................

               151    -    201
UN22057        --> TCCGGAATGTTCTTGAAAGTATACTGAAAACGTATTTGATGAAGAATCCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV546882       <-- ..................................................
FD952303       <-- ..................................................
FD582746       <-- ..................................................
EV551851       --> TCCGGAATGTTCTTGAAAGTATACTGAAAACGTATTTGATGAAGAATCCG
EX755143       --> TCCGGAATGTTCTTGAAAGTATACTGAAAACGTATTTGATGAAGAATCCG
FD956493       --> TCCGGAATGTTCTTGAAAGTATACTGAAAACGTATTTGATGAAGAATCCG
FY435755       --> TCCGGAATGTTCTTGAAAGTATACTGAAAACGTATTTGATGAAGAATCCG
FD578618       --> TCCGGAATGTTCTTGAAAGTATACTGAAAACGTATTTGATGAAGAATCCG
FY443557       --> TCCGGAATGTTCTTGAAAGTATACTGAAAACGTATTTGATGAAGAATCCG
FY444532       --> TCCGGAATGTTCTTGAAAGTATACTGAAAACGTATTTGATGAAGAATCCG
FD560048       --> TCCGGAATGTTCTTGAAAGTATACTGAAAACGTATTTGATGAAGAATCCG
FD563897       --> ..................................................
FD956412       --> ..................................................

               201    -    251
UN22057        --> ACAGTGAAGACGATATGGGAACTAGTTCAGTCGATGGACAACGAAAAAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV546882       <-- ..................................................
FD952303       <-- ..................................................
FD582746       <-- ..................................................
EV551851       --> ACAGTGAAGACGATATGGGAACTAGTTCAGTCGATGGACAACGAAAAGAT
EX755143       --> ACAGTGAAGACGATATGGGAACTAGTTCAGTCGATGGACAATGAAAAGAT
FD956493       --> ACAGTGAAGACGATATGGGAACTAGTTCAGTCGATGGACAACGAAAAAAT
FY435755       --> ACAGTGAAGACGATATGGGAACTAGTTCAGTCGATGGACAACGAAAAAAT
FD578618       --> ACAGTGAAGACGATATGGGAACTAGTTCAGTCGATGGACAACGAAAAGAT
FY443557       --> ACAGTGAAGACGATATGGGAACTAGTTCAGTCGATGGACAACGAAAAAAT
FY444532       --> ACAGTGAAGACGATATGGGAACTAGTTCAGTCGATGGACAACGAAAAAAT
FD560048       --> ACAGTGAAGACGATATGGGAACTAGTTCAGTCGATGGACAACGAAAAAAT
FD563897       --> ..................................................
FD956412       --> ..................................................

               251    -    301
UN22057        --> ATGCTACGATCACTTCACTTTCAGGACATTTAAGGTAGATGGTTATGGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV546882       <-- ..................................................
FD952303       <-- ..................................................
FD582746       <-- ..................................................
EV551851       --> ATGCTACGATCACTTCACTTTCAGGACATTTAAGGTAGATGGTTATGGAA
EX755143       --> ATGCTACGATCACTTCACTTTCAGGACATTTAAGGTAGATGGTTATGGAA
FD956493       --> ATGCTACGATCACTTCACTTTCAGGACATTTAAGGTAGATGGTTATGGAA
FY435755       --> ATGCTACGATCACTTCACTTTCAGGACATTTAAGGTAGATGGTTATGGAA
FD578618       --> ATGCTACGATCACTTCACTTTCAGGACATTTAAGGTAGATGGTTATGGAA
FY443557       --> ATGCTACGATCACTTCACTTTCAGGACATTTAAGGTAGATGGTTATGGAA
FY444532       --> ATGCTACGATCACTTCACTTTCAGGACATTTAAGGTAGATGGTTATGGAA
FD560048       --> ATGCTACGATCACTTCACTTTCAGGACATTTAAGGTAGATGGTTATGGAA
FD563897       --> ..................................................
FD956412       --> ..................................................

               301    -    351
UN22057        --> TAGATTCCTTGTCGAGTTTTTTCATGGATTATGGATACAAAATTGGAGGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV546882       <-- ...........................ATTATGGATACAAAATTGGAGGC
FD952303       <-- ..................................................
FD582746       <-- ..................................................
EV551851       --> TAGATTCCTTGTCGAGTTTTTTCATGGATTATGGATACAAAATTGGAGGC
EX755143       --> TAGATTCTTTGTCGAGTTTTTTCATGGATTACGGATACAAAATTGGAGGC
FD956493       --> TAGATTCCTTGTCGAGTTTTTTCATGGATTATGGATACAAAATTGGAGGC
FY435755       --> TAGATTCCTTGTCGAGTTTTTTCATGGATTATG.................
FD578618       --> TAGATTCCTTGTCGAGTTTTTTCATGGATTATGGATACAAAATTGGAGGC
FY443557       --> TAGATTCCTTGTCGAGTTTTTTCATGGATTATGGATACAAAATTGGAGGC
FY444532       --> TAGATTCCTTGTCGAGTTTTTTCATGGATTATGGATACAAAATTGGAGGC
FD560048       --> TAGATTCCTTGTCGAGTTTTTTCATGGATTATGGATACAAAATTGGAGGC
FD563897       --> ..............................gcGGATACAAAATTGGAGGC
FD956412       --> ..................................................

               351    -    401
UN22057        --> GAACTTGAATTTTCAAAGAACAAATCAAAAGTTAAATGGTTTTCTCCTCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV546882       <-- GAGCTTGAATTTTCAAAGAACAAATCAAAAGTTAAATGGTTTTCTCCTCC
FD952303       <-- ..................................................
FD582746       <-- ..................................................
EV551851       --> GAGCTTGAATTTTCAAAGAACAAATCAAAAGTTAAATGGTTTTCTCCTCC
EX755143       --> GAACTTGATTTTCCAAAGAACAAATCAAAAGTTAAATGGTTTTCTCCTCC
FD956493       --> GAACTTGAATTTTCAAAGAACAAATCAAAAGTTAAATGGTTTTCTCCTCC
FY435755       --> ..................................................
FD578618       --> GAACTTGAATTTTCAAAGAACAAATCAAAAGTTAAATGGTTTTCTCCTCC
FY443557       --> GAACTTGAATTTTCAAAGAACAAATCAAAAGTTAAATGGTTTTCTCCTCC
FY444532       --> GAACTTGAATTTTCAAAGAACAAATCAAAAGTTAAATGGTTTTCTCCTCC
FD560048       --> GAACTTGAATTTTCAAAGAACAAATCAAAAGTTAAATGGTTTTCTCCTCC
FD563897       --> GAACTTGATTTTCCAAAGAATAAATCAAAAGTTAAATGGTTTTCTCCTCC
FD956412       --> ..................................................

               401    -    451
UN22057        --> GGATGTTCACGTCCCTCATGACGGTCACGGTCTAACCAACGGCCCTTTGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV546882       <-- GGATGTTCACGTCCCTCATGACGGTCACGGTCTAACCAACGGCCCCTTGC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD952303       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD582746       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EV551851       --> GGATGTTCACGTCCCTCATGACGGTCACGGTCTAACCAACGGCCCCTTGC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX755143       --> GGATGTTCACGTCCCTCACGACGGTCATGGTCTAACCAACGGCCCTTTGC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD956493       --> GGATGTTCACGTCCCTCATGACGGTCACGGTCTAACCAACGGCCCTTTGC  Raphanus sativus cv Rat-Tail Radish #3870
FY435755       --> ..................................................  Raphanus sativus cv GSK3-1
FD578618       --> GGATGTTCACGTCCCTCATGACGGTCACGGTCTAACCAACGGCCCCTTGC  Raphanus sativus cv Rat-Tail Radish #3870
FY443557       --> GGATGTTCACGTCCCTCATGACGGTCACGGTCTAACCAACGGCCCTTTGC  Raphanus sativus cv GSK3-1
FY444532       --> GGATGTTCACGTCCCTCATGACGGTCACGGTCTAACCAACGGCCCTTTGC  Raphanus sativus cv GSK3-1
FD560048       --> GGATGTTCACGTCCCTCATGACGGTCACGGTCTAACCAACGGCCCTTTGC  Raphanus raphanistrum subsp. landra
FD563897       --> GGATGTTCACGTCCCTCATGACGGTCACGGTCTAACCAACGGCCCTTTGC  Raphanus sativus var. oleiformis
FD956412       --> ................gATGACGGTCACGGTCTAACCAACGGCCCCTTGC  Raphanus sativus cv Rat-Tail Radish #3870

               451    -    501
UN22057        --> CACGAATCGTTATAGCTGAGGTTCTTCTGGACCAACTAAGCCCTGAATCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV546882       <-- CACGAATCGTTATAGCTGAGGTTCTTCTGGACCAACTAAGCCCTGAATCA
FD952303       <-- ........................TTCTGGACCAACTAAGCCCTGAATCA
FD582746       <-- ..............................................ATCA
EV551851       --> CACGAATCGTTATAGCTGAGGTTCTTCTGGACCAACTAAGCCCTGAATCA
EX755143       --> CACGAATCGCTATAGCTGAGGTTCTTCTTGACCAACTTAGCCTTGAATCA
FD956493       --> CACGAATCGTTATAGCTGAGTTTCTTCTGGACCAACTAAGCCCTGAATCA
FY435755       --> ..................................................
FD578618       --> CACGAATCGTTATAGCTGAGGTTCTTCTGGACCAACTAAGCCCTGAATCA
FY443557       --> CACGAATCGTTATAGCTGAGGTTCTTCTGGACCAACTAAGCCCTGAATCA
FY444532       --> CACGAATCGTTATAGCTGAGGTTCTTCTGGACCAACTAAGCCCTGAATCA
FD560048       --> CACGAATCGTTATAGCTGAGGTTCTTCTGGACCAACTAAGCCCTGAATCA
FD563897       --> CACGAATCGTTATAGCTGAGGTTCTTCTGGACCAACTTAGCCTTGAATCA
FD956412       --> CACGAATCGTTATAGCTGAGGTTCTTCTGGACCAACTAAGCCCTGAATCA

               501    -    551
UN22057        --> CAGGGGATAATAAGAAAGTACTTGAAACCAGAAGGTGGTAAGCAAGCGGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV546882       <-- CAGGGGATAATAAGAAAGTACTTGAAACCAGAAGGTGGTAAGCAAGCGGT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD952303       <-- CAGGGGATAATAAGAAAGTACTTGAAACCAGAAGGTGGTAAGCAAGCGGT  Raphanus sativus cv Rat-Tail Radish #3870
FD582746       <-- CAGGGGATAATAAGAAAGTACTTGAAACCAGAAGGTGGTAAGCAAGCGGT  Raphanus sativus cv Rat-Tail Radish #3870
EV551851       --> CAGGGGATAATAAGAAAGTACTTGAAACCAGAAGGTGGTAAGCAAGCGGT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX755143       --> CAGGGGATAATAAGAAAGTACTTGAAACCAGAAGGTGGTAAGCAAGCGGT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD956493       --> CAGGGGGTAATAAGAAAGTACTTGAAACCAGAAGGTGGTAAGCAAGCGGT  Raphanus sativus cv Rat-Tail Radish #3870
FY435755       --> ..................................................  Raphanus sativus cv GSK3-1
FD578618       --> CAGGGGATAATAAGAAAGTACTTGAAACCAGAAGGTGGTAAGCAAGCGGT  Raphanus sativus cv Rat-Tail Radish #3870
FY443557       --> CAGGGGGTAATAAGAAAGTACTTGAAACCAGAAGGTGGTAAGCAAGCGGT  Raphanus sativus cv GSK3-1
FY444532       --> CAGGGGGTAATAAGAAAGTACTTGAAACCAGAAGGTGGTAAGCAAGCGGT  Raphanus sativus cv GSK3-1
FD560048       --> CAGGGGGTAATAAGAAAGTACTTGAAACCAGAAGGTGGTAAGCAAGCGGT  Raphanus raphanistrum subsp. landra
FD563897       --> CAGGGGATAATAAGAAAGTATTTGAAACCAGAAGGTGGTAAGCAAGCGGT  Raphanus sativus var. oleiformis
FD956412       --> CAGGGGATAATAAGAAAGTACTTGAAACCAGAAGGTGGTAAGCAAGCGGT  Raphanus sativus cv Rat-Tail Radish #3870

               551    -    601
UN22057        --> TCTGTCAAGTACTTTGGGGTCCTTAATATGGGAGAAGCCTACATGGACCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV546882       <-- TCTGTCAAGTACTTTGGGGTCCTTAATATGGGAGAAGCCTACATGGACCG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD952303       <-- TCTGTCAAGTACTTTGGGGTCCTTAATATGGGAGAAGCCTACATGGACCG  Raphanus sativus cv Rat-Tail Radish #3870
FD582746       <-- TCTGTCAAGTACTTTGGGGTCCTTAATATGGGAGAAGCCTACATGGACCG  Raphanus sativus cv Rat-Tail Radish #3870
EV551851       --> TCTGTCAAGTACTTTGGGGTCCTTAATATGGGAGAAGCCTACATGGACCG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX755143       --> TCTGTCAAGCACTTTGGGGTCCTTAATATGGGAGAAGCCTACATGGACCG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD956493       --> TCTGTCAAGTACTTTGGGATCCTTAATATGGGAGAAGCCTACATGGAACG  Raphanus sativus cv Rat-Tail Radish #3870
FY435755       --> ..................................................  Raphanus sativus cv GSK3-1
FD578618       --> TCTGTCAAGTACTTTGGGGTCCTTAATATGGGAGAAGCCTACATGGACCG  Raphanus sativus cv Rat-Tail Radish #3870
FY443557       --> TCTGTCAAGTACTTTGGGGTCCTTAATATGGGAGAAGCCTACATGGAACG  Raphanus sativus cv GSK3-1
FY444532       --> TCTGTCAAGTACTTTGGGGTCCTTAATATGGGAGAAGCCTACATGGAACG  Raphanus sativus cv GSK3-1
FD560048       --> TCTGTCAAGTACTTTGGGATCCTTAATATGGGAGAAGCCTACATGGAACG  Raphanus raphanistrum subsp. landra
FD563897       --> TCTGTCAAGCACTTTGGGGTCCTTAATATGGGAGAAGCCTAAATGGACTG  Raphanus sativus var. oleiformis
FD956412       --> TCTGTCAAGTACTTTGGGGTCCTTAATATGGGAGAAGCCTACATGGACCG  Raphanus sativus cv Rat-Tail Radish #3870

               601    -    651
UN22057        --> ACTTCAAGCAACTCGCAAAAGAAAACGAATTTGCGGCATGGACGCTTATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV546882       <-- ACTTCAAGCAACTCGCAAAAGAAAACGAATTTGCGGCATGGACGCTTATC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD952303       <-- ACTTCAAGCAACTCGCAAAAGAAAACGAATTTGCGGCATGGACGCTTATC  Raphanus sativus cv Rat-Tail Radish #3870
FD582746       <-- ACTTCAAGCAACTCGCAAAAGAAAACGAATTTGCGGCATGGACGCTTATC  Raphanus sativus cv Rat-Tail Radish #3870
EV551851       --> ACTTCAAGCAACTCGCAAAAGAAAACGAATTTGCGGCATGGACGCTTATC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX755143       --> ACTTCAAGCAACTCGCAAAAGAAAATGAATTTGCGGCATGGACGCTTATC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD956493       --> ACTTCAAGCAACTCGCAAAAGAAAACGAATTTGCGGCATGGACGTTTATC  Raphanus sativus cv Rat-Tail Radish #3870
FY435755       --> ..................................................  Raphanus sativus cv GSK3-1
FD578618       --> ACTTCAAGCAACTCGCAAAAGAAAACGAATTTGCGGCATGGACGCTTATC  Raphanus sativus cv Rat-Tail Radish #3870
FY443557       --> ACTTCAAGCAACTCGCAAAAGAAAACGAATTTGCGGCATGGACGCTTATC  Raphanus sativus cv GSK3-1
FY444532       --> ACTTCAAGCAACTCGCAAAAGAAAACGAATTTGCGGCATGGACGCTTATC  Raphanus sativus cv GSK3-1
FD560048       --> ACTTCAAGCAACTCGCAAAAGAAAACGAATTTGCGGCATGGACGTTTATC  Raphanus raphanistrum subsp. landra
FD563897       --> ACTTCAAGCAACTCGCAAAAGAAAACGAATTTG.................  Raphanus sativus var. oleiformis
FD956412       --> ACTTCAAGCAACTCGCAAAAGAAAACGAATTTGCGGCATGGACGCTTATC  Raphanus sativus cv Rat-Tail Radish #3870

               651    -    701
UN22057        --> AACGGCTACACAATGAACCATCTTGCATTTTCGGTTCATCGATTCAAACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV546882       <-- AACGGCTACACAATGAACCATCTTGCATTTTCGGTTCATCGATTCAAACA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD952303       <-- AACGGCTACACAATGAACCATCTTGCATTTTCGGTTCATCGATTCAAACA  Raphanus sativus cv Rat-Tail Radish #3870
FD582746       <-- AACGGCTACACAATGAACCATCTTGCATTTTCGGTTCATCGATTCAAACA  Raphanus sativus cv Rat-Tail Radish #3870
EV551851       --> AACGGCTACACAATGAACCATCTTGCATTTTCGGTTCATCGATTCAAACA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX755143       --> CACGGCTACACGATGAACCATCTTGCATTTTCGGTTCATCGATTCAAACA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD956493       --> CACGGCTACACAATGAACCATCTTGCATTTTCG-TTCATCGATTCAAACA  Raphanus sativus cv Rat-Tail Radish #3870
FY435755       --> ..................................................  Raphanus sativus cv GSK3-1
FD578618       --> AACGGCTACACAATGAACCATCTTGCATTTTCGGTTCATCGATTCAAACA  Raphanus sativus cv Rat-Tail Radish #3870
FY443557       --> CACGGCTACACAATGAACCATCTTGCATTTTCGGTTCATCGATTCAAACA  Raphanus sativus cv GSK3-1
FY444532       --> CACGGCTACACAATGAACCATCTTGCATTTTCGGTTCATCGATTCAAACA  Raphanus sativus cv GSK3-1
FD560048       --> CACGGCTACACAATGAACCATCTTGCATTTTCGGTTCATCGATTCAAACA  Raphanus raphanistrum subsp. landra
FD563897       --> ..................................................  Raphanus sativus var. oleiformis
FD956412       --> AACGGCTACACAATGAACCATCTTGCATTTTCGGTTCATCGATTCAAACA  Raphanus sativus cv Rat-Tail Radish #3870

               701    -    751
UN22057        --> CAAGTTCAGTGACATTAAGTTCATCAAACAGTATCTTGAAGAAAAGGAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV546882       <-- CAAGTTCAGTGACATTAAGTTCATCAAACAGTATCTTGAAGAAAAGGAAT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD952303       <-- CAAGTTCAGTGACATTAAGTTCATCAAACAGTATCTTGAAGAAAAGGAAT  Raphanus sativus cv Rat-Tail Radish #3870
FD582746       <-- CAAGTTCAGTGACATTAAGTTCATCAAACAGTATCTTGAAGAAAAGGAAT  Raphanus sativus cv Rat-Tail Radish #3870
EV551851       --> CAAGTTCAGTGACATTAAGTTCATCAAACAGTATCTTGAAGAAAAGGAAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX755143       --> CCAGTT............................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD956493       --> CCAGTTCAGTGACATTAAGTTCATCAAACAGTATCTTGAAGAAAAG-AAT  Raphanus sativus cv Rat-Tail Radish #3870
FY435755       --> ..................................................  Raphanus sativus cv GSK3-1
FD578618       --> CAAGTTCAGTGACATTAAGTTCATCAAACAGTATCTTGAAGAAAAGGA-T  Raphanus sativus cv Rat-Tail Radish #3870
FY443557       --> CCAGTTCAGTGACATTAAGTTCATCAAACAGTATCTTGAAGAAAAGGAAT  Raphanus sativus cv GSK3-1
FY444532       --> CCAGTTCAGTGACATTAAGTTCATCAAACAGTATCTTGAAGAAAAGGAAT  Raphanus sativus cv GSK3-1
FD560048       --> CCAGTTCA..........................................  Raphanus raphanistrum subsp. landra
FD563897       --> ..................................................  Raphanus sativus var. oleiformis
FD956412       --> CAAGTTCAGTGACATTAAGTTCATCAAACAGTATCTTGAAGAAAAGGAAT  Raphanus sativus cv Rat-Tail Radish #3870

               751    -    801
UN22057        --> TCAAACTTAACACTGACGGGGGAGTTATCAAAGTGAGTCAAGATGGTCTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV546882       <-- TCAAACTTAACACTGACGGGGGAGTTATCAAAGTGAGTCAAGATGGTCTA
FD952303       <-- TCAAACTTAACACTGACGGGGGAGTTATCAAAGTGAGTCAAGATGGTCTA
FD582746       <-- TCAAACTTAACACTGACGGGGGAGTTATCAAAGTGAGTCAAGATGGTCTA
EV551851       --> TCAAACTTAACACT....................................
EX755143       --> ..................................................
FD956493       --> TCAAACTTA-CACTGACGGGG-AGTTATCAAAGTGAGTCAAGATGG....
FY435755       --> ..................................................
FD578618       --> TCAAACTTAACACTGACGGGGGAGTTATCAAAGTGAGTCA..........
FY443557       --> TCAAACTTAACACTGACGGGGGAGTTATCAAAGTGAGTCAAGATGGTCTA
FY444532       --> TCAAACTTAACACTGACGGGGGAGTTATCAAAGTGAGTCAAGATGGTCTA
FD560048       --> ..................................................
FD563897       --> ..................................................
FD956412       --> TCAAACTTAACACTGACGGGGGAGTTATCAAAGTGAGTCAAGATGGTCTA

               801    -    851
UN22057        --> CTGTTACAAGTCTCGTCGATGTCGGACAAACTTGCGGTTGAATTTGCTGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV546882       <-- CTGTTACAAGTCTCGTCGATGTCGGACAAACTTGCGGTTGAATTTGCTGA
FD952303       <-- CTGTTACAAGTCTCGTCGATGTCGGACAAACTTGCGGTTGAATTTGCTGA
FD582746       <-- CTGTTACAAGTTTCGTCGATGTCGGACAAACTTGCGGTTGAATTTGCTGA
EV551851       --> ..................................................
EX755143       --> ..................................................
FD956493       --> ..................................................
FY435755       --> ..................................................
FD578618       --> ..................................................
FY443557       --> CTGTTACAAGTATCGTCTATCGCGGACAAACTTGCGGTTGAATTTGCTGA
FY444532       --> CTGTTACAAGTATCGTCTATCGCGGACAAACTTGCGGTTGAATTTGCTGA
FD560048       --> ..................................................
FD563897       --> ..................................................
FD956412       --> CTGTTACAAGTCTCGTCGATGTCGGACAAACTTGCGGTTGAATTTGCTGA

               851    -    901
UN22057        --> GGGAGTAACTGAAACAATCCCGGCTTCTTACATTGAGTTTACTCAACGTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV546882       <-- GGGAGTAACTGAAACAATCCCGGCTTCTTACATTGAGTTTACTCAACGTC
FD952303       <-- GGGAGTAACTGAAACAATCCCGGCTTCTTACATTGAGTTTACTCAACGTC
FD582746       <-- GGGAGTAACTGAAACAATCCCGGCTTCTTACATTGAGTTTACTCAACGTC
EV551851       --> ..................................................
EX755143       --> ..................................................
FD956493       --> ..................................................
FY435755       --> ..................................................
FD578618       --> ..................................................
FY443557       --> CGGAGTAGCTGAAACAATCCCGGCTTCTTACATTGAGTTTACTCAACGTC
FY444532       --> CGGAGTAGCTGAAACAATCCCGGCTTCTTACATTGAGTTTACT.......
FD560048       --> ..................................................
FD563897       --> ..................................................
FD956412       --> GGGAGTAACTGAAACAATCCCGGCTTCTTACATTGAGTTTACTCAACGTC

               901    -    951
UN22057        --> TAGTTCTTCCACAGTTCAAAGATGTGCCGTTTGATGAGATTAAAGAGTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV546882       <-- TAGTTCTTCCACAGTTCAAAGATGTGCCGTTTGATGAGATTAAAGAGTTT
FD952303       <-- TAGTTCTTCCACAGTTCAAAGATGTGCCGTTTGATGAGATTAAAGAGTTT
FD582746       <-- TAGTTTTTCCACAGTTCAAAGATGTGCCGTTTGATGAGATTAAAGAGTTT
EV551851       --> ..................................................
EX755143       --> ..................................................
FD956493       --> ..................................................
FY435755       --> ..................................................
FD578618       --> ..................................................
FY443557       --> TAGTTCTTCCACAGTTTCAAGATGTGCCGTTTGATGAGATTAAAGAGTTc
FY444532       --> ..................................................
FD560048       --> ..................................................
FD563897       --> ..................................................
FD956412       --> TAGTTCTTCCACAGTTCAAAGATGTGCCGTTTGATGAGATTAAAGAGTTT

               951    -   1001
UN22057        --> CATAGGCGTGAAGCCTTTGAGCTTGATAACGCCAGCAACATAATGGAAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV546882       <-- CATAGACGTGAAGCCTTTGAGCTTGATAACGCCAGCAACATAATGGAAAG
FD952303       <-- CATAGGCGTGAAGCCTTTGAGCTTGACAACGCCAGCAACATAATGGAAAG
FD582746       <-- CATAGACGTGAAGCCTTTGAGCTTGATAACGCCAGCAACATAATGGAAAG
EV551851       --> ..................................................
EX755143       --> ..................................................
FD956493       --> ..................................................
FY435755       --> ..................................................
FD578618       --> ..................................................
FY443557       --> ..................................................
FY444532       --> ..................................................
FD560048       --> ..................................................
FD563897       --> ..................................................
FD956412       --> CATAGGCGTGAAGCCTTTGAGCTTGACAACGCCAGCAACATAATGGAAAG

               1001   -   1051
UN22057        --> TACCCGTTTCACAGCACCAGTGTAAAACAAGACTTGTCTTGCTGGGCTCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV546882       <-- TACCCGTTTCACAGCACCAGTGTAAAACAAGACTTGTCTTGCTGGGCTCA
FD952303       <-- TACCCGTTTCACAGCACCAGTGTAAAACAAGACTTGTCTTGCTGGGCTCA
FD582746       <-- TACCCGTTTCACAGCACCAGTGTAAAACAAGACTTGTCTTGCTGGGCTCA
EV551851       --> ..................................................
EX755143       --> ..................................................
FD956493       --> ..................................................
FY435755       --> ..................................................
FD578618       --> ..................................................
FY443557       --> ..................................................
FY444532       --> ..................................................
FD560048       --> ..................................................
FD563897       --> ..................................................
FD956412       --> TACCCGTTTCACAGCACCAGTGTAAAACAAGACTTGTCTTGCTGGGCTCA

               1051   -   1101
UN22057        --> GTAGTATGCCAAATGTGTGCATGTATTTGTGTGTTTATGTATGAGTGAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV546882       <-- GTAGTATGCCAAATGTGTGCATGTATTTGTGTGTTTATGTATGAGTGAGC
FD952303       <-- GTAGTATGCCAAATGTGTGCATGTATTTGTGTGTTTATGTATGAGTGAGC
FD582746       <-- GTAGTATGCCAAATGTGTGCATGTATTTGCGTGTTTATGTATGAGTGAGC
EV551851       --> ..................................................
EX755143       --> ..................................................
FD956493       --> ..................................................
FY435755       --> ..................................................
FD578618       --> ..................................................
FY443557       --> ..................................................
FY444532       --> ..................................................
FD560048       --> ..................................................
FD563897       --> ..................................................
FD956412       --> GTAGTATGCCAAATGTGTGCATGTATTTGTGTGTTTATGTATGAGTGAGC

               1101   -   1151
UN22057        --> TTGTGACCTTGATTCCGATCGGTAACAATAATGTATAATCGTGGAATGGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV546882       <-- TTGTGACCTTGATTCCGATCGGTAACAATAATGTATAATCGTGG......
FD952303       <-- TTGTGACCTTGATTCCGATCGGTAACAATAACGTATAATCGTGGAATGGC
FD582746       <-- TTGTGACCTTGATTCCGATCGGTAACAATAATGTATAATCGTGGAATGGC
EV551851       --> ..................................................
EX755143       --> ..................................................
FD956493       --> ..................................................
FY435755       --> ..................................................
FD578618       --> ..................................................
FY443557       --> ..................................................
FY444532       --> ..................................................
FD560048       --> ..................................................
FD563897       --> ..................................................
FD956412       --> TTGTGACCTTGATTCCGATCGGT...........................

               1151   -   1201
UN22057        --> AGAAAATATAATTAAGTTATG
                   ~~~~~~~~~~~~~~~~~~~~~
EV546882       <-- .....................
FD952303       <-- AGAAAATATAATTAAGTTATG
FD582746       <-- AGAAAATATAATTAAGTTATG
EV551851       --> .....................
EX755143       --> .....................
FD956493       --> .....................
FY435755       --> .....................
FD578618       --> .....................
FY443557       --> .....................
FY444532       --> .....................
FD560048       --> .....................
FD563897       --> .....................
FD956412       --> .....................